Warning: Permanently added '3.92.56.213' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/7514019-fedora-39-x86_64 --chroot fedora-39-x86_64 Version: 0.73 PID: 10059 Logging PID: 10060 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 7514019, 'buildroot_pkgs': [], 'chroot': 'fedora-39-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '97531be61d846892f18a1c495c4328039f138307', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3/python-netpyne', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'python-netpyne', 'package_version': '1.0.6-4', 'project_dirname': 'scipy-1.8.3', 'project_name': 'scipy-1.8.3', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/scipy-1.8.3/fedora-39-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/scipy-1.8.3--https://src.fedoraproject.org/user/gui1ty', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'submitter': 'https://src.fedoraproject.org/user/gui1ty', 'tags': [], 'task_id': '7514019-fedora-39-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3/python-netpyne /var/lib/copr-rpmbuild/workspace/workdir-s_w4h724/python-netpyne --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3/python-netpyne', '/var/lib/copr-rpmbuild/workspace/workdir-s_w4h724/python-netpyne', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-s_w4h724/python-netpyne'... Running: git checkout 97531be61d846892f18a1c495c4328039f138307 -- cmd: ['git', 'checkout', '97531be61d846892f18a1c495c4328039f138307', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-s_w4h724/python-netpyne rc: 0 stdout: stderr: Note: switching to '97531be61d846892f18a1c495c4328039f138307'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 97531be automatic import of python-netpyne Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-s_w4h724/python-netpyne rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading netpyne-1.0.6.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o netpyne-1.0.6.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/scipy-1.8.3/python-netpyne/netpyne-1.0.6.tar.gz/md5/f30a4b67b227a5a3bf4e42ed7d5400e6/netpyne-1.0.6.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 28.5M 100 28.5M 0 0 25.4M 0 0:00:01 0:00:01 --:--:-- 25.4M INFO: Reading stdout from command: md5sum netpyne-1.0.6.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-s_w4h724/python-netpyne/python-netpyne.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-s_w4h724/python-netpyne --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1717188061.300765 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.6 starting (python version = 3.12.1, NVR = mock-5.6-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-s_w4h724/python-netpyne/python-netpyne.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-s_w4h724/python-netpyne --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1717188061.300765 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-s_w4h724/python-netpyne/python-netpyne.spec) Config(fedora-39-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.6 INFO: Mock Version: 5.6 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1717188061.300765/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:39 INFO: Pulling image: registry.fedoraproject.org/fedora:39 INFO: Copy content of container registry.fedoraproject.org/fedora:39 to /var/lib/mock/fedora-39-x86_64-bootstrap-1717188061.300765/root INFO: Checking that registry.fedoraproject.org/fedora:39 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:39 with podman image mount INFO: image registry.fedoraproject.org/fedora:39 as /var/lib/containers/storage/overlay/a173f0fe44b6e8f56aa53f1177f515a4109ec9edd704178d6a8dd89d638192c0/merged INFO: umounting image registry.fedoraproject.org/fedora:39 (/var/lib/containers/storage/overlay/a173f0fe44b6e8f56aa53f1177f515a4109ec9edd704178d6a8dd89d638192c0/merged) with podman image umount INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 47 MB/s | 2.0 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 126 MB/s | 75 MB 00:00 fedora 64 MB/s | 89 MB 00:01 updates 48 MB/s | 38 MB 00:00 Package python3-dnf-4.19.2-1.fc39.noarch is already installed. Dependencies resolved. ========================================================================================================================= Package Arch Version Repository Size ========================================================================================================================= Installing: dnf5 x86_64 5.2.2.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 692 k replacing dnf.noarch 4.19.2-1.fc39 replacing yum.noarch 4.19.2-1.fc39 python3-dnf-plugins-core noarch 4.7.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 302 k Upgrading: dnf-data noarch 4.20.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39 k libstdc++ x86_64 14.1.1-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 884 k python3-dnf noarch 4.20.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 580 k Installing dependencies: dbus-libs x86_64 1:1.14.10-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 156 k fmt x86_64 10.2.1-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 125 k libdnf5 x86_64 5.2.2.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 M libdnf5-cli x86_64 5.2.2.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 306 k python3-dateutil noarch 1:2.8.2-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 345 k python3-dbus x86_64 1.3.2-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 145 k python3-distro noarch 1.9.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45 k python3-six noarch 1.16.0-14.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k python3-systemd x86_64 235-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100 k sdbus-cpp x86_64 1.5.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 113 k Transaction Summary ========================================================================================================================= Install 12 Packages Upgrade 3 Packages Total download size: 4.8 M Downloading Packages: (1/15): dbus-libs-1.14.10-3.fc40.x86_64.rpm 2.0 MB/s | 156 kB 00:00 (2/15): fmt-10.2.1-4.fc41.x86_64.rpm 1.4 MB/s | 125 kB 00:00 (3/15): libdnf5-cli-5.2.2.0-1.fc41.x86_64.rpm 8.0 MB/s | 306 kB 00:00 (4/15): dnf5-5.2.2.0-1.fc41.x86_64.rpm 5.2 MB/s | 692 kB 00:00 (5/15): python3-dateutil-2.8.2-13.fc40.noarch.r 13 MB/s | 345 kB 00:00 (6/15): python3-dbus-1.3.2-6.fc40.x86_64.rpm 6.0 MB/s | 145 kB 00:00 (7/15): libdnf5-5.2.2.0-1.fc41.x86_64.rpm 13 MB/s | 1.0 MB 00:00 (8/15): python3-six-1.16.0-14.fc40.noarch.rpm 2.6 MB/s | 41 kB 00:00 (9/15): python3-dnf-plugins-core-4.7.0-1.fc41.n 12 MB/s | 302 kB 00:00 (10/15): python3-distro-1.9.0-3.fc40.noarch.rpm 1.7 MB/s | 45 kB 00:00 (11/15): python3-systemd-235-9.fc40.x86_64.rpm 4.8 MB/s | 100 kB 00:00 (12/15): dnf-data-4.20.0-1.fc41.noarch.rpm 2.0 MB/s | 39 kB 00:00 (13/15): sdbus-cpp-1.5.0-2.fc41.x86_64.rpm 5.5 MB/s | 113 kB 00:00 (14/15): python3-dnf-4.20.0-1.fc41.noarch.rpm 23 MB/s | 580 kB 00:00 (15/15): libstdc++-14.1.1-4.fc41.x86_64.rpm 30 MB/s | 884 kB 00:00 -------------------------------------------------------------------------------- Total 21 MB/s | 4.8 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Upgrading : libstdc++-14.1.1-4.fc41.x86_64 1/20 Installing : fmt-10.2.1-4.fc41.x86_64 2/20 Installing : libdnf5-5.2.2.0-1.fc41.x86_64 3/20 warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : libdnf5-cli-5.2.2.0-1.fc41.x86_64 4/20 Upgrading : dnf-data-4.20.0-1.fc41.noarch 5/20 Upgrading : python3-dnf-4.20.0-1.fc41.noarch 6/20 Installing : sdbus-cpp-1.5.0-2.fc41.x86_64 7/20 Installing : python3-systemd-235-9.fc40.x86_64 8/20 Installing : python3-six-1.16.0-14.fc40.noarch 9/20 Installing : python3-dateutil-1:2.8.2-13.fc40.noarch 10/20 Installing : python3-distro-1.9.0-3.fc40.noarch 11/20 Installing : dbus-libs-1:1.14.10-3.fc40.x86_64 12/20 Installing : python3-dbus-1.3.2-6.fc40.x86_64 13/20 Installing : python3-dnf-plugins-core-4.7.0-1.fc41.noarch 14/20 Installing : dnf5-5.2.2.0-1.fc41.x86_64 15/20 Obsoleting : yum-4.19.2-1.fc39.noarch 16/20 Running scriptlet: dnf-4.19.2-1.fc39.noarch 17/20 Obsoleting : dnf-4.19.2-1.fc39.noarch 17/20 warning: directory /var/cache/dnf: remove failed: Device or resource busy Running scriptlet: dnf-4.19.2-1.fc39.noarch 17/20 Cleanup : python3-dnf-4.19.2-1.fc39.noarch 18/20 Cleanup : dnf-data-4.19.2-1.fc39.noarch 19/20 Cleanup : libstdc++-13.3.1-1.fc39.x86_64 20/20 Running scriptlet: libstdc++-13.3.1-1.fc39.x86_64 20/20 Verifying : dbus-libs-1:1.14.10-3.fc40.x86_64 1/20 Verifying : dnf5-5.2.2.0-1.fc41.x86_64 2/20 Verifying : dnf-4.19.2-1.fc39.noarch 3/20 Verifying : yum-4.19.2-1.fc39.noarch 4/20 Verifying : fmt-10.2.1-4.fc41.x86_64 5/20 Verifying : libdnf5-5.2.2.0-1.fc41.x86_64 6/20 Verifying : libdnf5-cli-5.2.2.0-1.fc41.x86_64 7/20 Verifying : python3-dateutil-1:2.8.2-13.fc40.noarch 8/20 Verifying : python3-dbus-1.3.2-6.fc40.x86_64 9/20 Verifying : python3-distro-1.9.0-3.fc40.noarch 10/20 Verifying : python3-dnf-plugins-core-4.7.0-1.fc41.noarch 11/20 Verifying : python3-six-1.16.0-14.fc40.noarch 12/20 Verifying : python3-systemd-235-9.fc40.x86_64 13/20 Verifying : sdbus-cpp-1.5.0-2.fc41.x86_64 14/20 Verifying : dnf-data-4.20.0-1.fc41.noarch 15/20 Verifying : dnf-data-4.19.2-1.fc39.noarch 16/20 Verifying : libstdc++-14.1.1-4.fc41.x86_64 17/20 Verifying : libstdc++-13.3.1-1.fc39.x86_64 18/20 Verifying : python3-dnf-4.20.0-1.fc41.noarch 19/20 Verifying : python3-dnf-4.19.2-1.fc39.noarch 20/20 Upgraded: dnf-data-4.20.0-1.fc41.noarch libstdc++-14.1.1-4.fc41.x86_64 python3-dnf-4.20.0-1.fc41.noarch Installed: dbus-libs-1:1.14.10-3.fc40.x86_64 dnf5-5.2.2.0-1.fc41.x86_64 fmt-10.2.1-4.fc41.x86_64 libdnf5-5.2.2.0-1.fc41.x86_64 libdnf5-cli-5.2.2.0-1.fc41.x86_64 python3-dateutil-1:2.8.2-13.fc40.noarch python3-dbus-1.3.2-6.fc40.x86_64 python3-distro-1.9.0-3.fc40.noarch python3-dnf-plugins-core-4.7.0-1.fc41.noarch python3-six-1.16.0-14.fc40.noarch python3-systemd-235-9.fc40.x86_64 sdbus-cpp-1.5.0-2.fc41.x86_64 Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1717188061.300765/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.20.0-1.fc41.noarch python3-dnf-plugins-core-4.7.0-1.fc41.noarch dnf5-5.2.2.0-1.fc41.x86_64 Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 33 MB/s | 2.0 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 87 MB/s | 75 MB 00:00 fedora 62 MB/s | 89 MB 00:01 updates 49 MB/s | 38 MB 00:00 Last metadata expiration check: 0:00:01 ago on Fri May 31 20:42:20 2024. Dependencies resolved. ============================================================================================================================================ Package Arch Version Repository Size ============================================================================================================================================ Installing group/module packages: bash x86_64 5.2.26-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 M bzip2 x86_64 1.0.8-18.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 52 k coreutils x86_64 9.5-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M cpio x86_64 2.15-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 285 k diffutils x86_64 3.10-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 397 k fedora-release-common noarch 41-0.13 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22 k findutils x86_64 1:4.9.0-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 482 k gawk x86_64 5.3.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M glibc-minimal-langpack x86_64 2.39.9000-18.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112 k grep x86_64 3.11-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 289 k gzip x86_64 1.13-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 164 k info x86_64 7.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 182 k patch x86_64 2.7.6-24.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 131 k redhat-rpm-config noarch 291-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 76 k rpm-build x86_64 4.19.91-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 75 k sed x86_64 4.9-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 309 k shadow-utils x86_64 2:4.15.1-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 M tar x86_64 2:1.35-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 847 k unzip x86_64 6.0-63.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 185 k util-linux x86_64 2.40.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 M which x86_64 2.21-41.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k xz x86_64 1:5.4.6-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 532 k Installing dependencies: add-determinism-nopython x86_64 0.2.0-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 891 k alternatives x86_64 1.27-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k ansible-srpm-macros noarch 1-15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21 k audit-libs x86_64 4.0.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 125 k authselect x86_64 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 479 k Installing Groups: Buildsystem building group Transaction Summary ============================================================================================================================================ Install 155 Packages Total download size: 53 M Installed size: 182 M Downloading Packages: (1/155): ansible-srpm-macros-1-15.fc41.noarch.r 295 kB/s | 21 kB 00:00 (2/155): alternatives-1.27-1.fc41.x86_64.rpm 505 kB/s | 41 kB 00:00 (3/155): authselect-1.5.0-5.fc41.x86_64.rpm 4.2 MB/s | 141 kB 00:00 (4/155): audit-libs-4.0.1-2.fc41.x86_64.rpm 2.1 MB/s | 125 kB 00:00 (5/155): authselect-libs-1.5.0-5.fc41.x86_64.rp 7.8 MB/s | 205 kB 00:00 (6/155): add-determinism-nopython-0.2.0-9.fc41. 5.9 MB/s | 891 kB 00:00 (7/155): basesystem-11-20.fc40.noarch.rpm 279 kB/s | 7.2 kB 00:00 (8/155): bash-5.2.26-3.fc40.x86_64.rpm 44 MB/s | 1.8 MB 00:00 (9/155): binutils-gold-2.42.50-11.fc41.x86_64.r 27 MB/s | 783 kB 00:00 (10/155): bzip2-1.0.8-18.fc40.x86_64.rpm 2.7 MB/s | 52 kB 00:00 (11/155): build-reproducibility-srpm-macros-0.2 375 kB/s | 9.1 kB 00:00 (12/155): bzip2-libs-1.0.8-18.fc40.x86_64.rpm 1.5 MB/s | 41 kB 00:00 (13/155): ca-certificates-2023.2.62_v7.0.401-6. 31 MB/s | 862 kB 00:00 (14/155): binutils-2.42.50-11.fc41.x86_64.rpm 65 MB/s | 6.4 MB 00:00 (15/155): coreutils-9.5-1.fc41.x86_64.rpm 31 MB/s | 1.1 MB 00:00 (16/155): cpio-2.15-1.fc40.x86_64.rpm 13 MB/s | 285 kB 00:00 (17/155): coreutils-common-9.5-1.fc41.x86_64.rp 57 MB/s | 2.1 MB 00:00 (18/155): crypto-policies-20240521-1.gitf71d135 3.0 MB/s | 65 kB 00:00 (19/155): curl-8.8.0-1.fc41.x86_64.rpm 14 MB/s | 302 kB 00:00 (20/155): cracklib-2.9.11-5.fc40.x86_64.rpm 3.2 MB/s | 82 kB 00:00 (21/155): debugedit-5.0-16.fc41.x86_64.rpm 3.7 MB/s | 80 kB 00:00 (22/155): diffutils-3.10-5.fc40.x86_64.rpm 18 MB/s | 397 kB 00:00 (23/155): cyrus-sasl-lib-2.1.28-22.fc41.x86_64. 27 MB/s | 793 kB 00:00 (24/155): ed-1.20.2-1.fc41.x86_64.rpm 4.0 MB/s | 82 kB 00:00 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-------------------------------------------------------------------------------- Total 30 MB/s | 53 MB 00:01 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. 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pcre2-10.43-2.fc41.1.x86_64 66/155 Installing : libselinux-3.6-4.fc40.x86_64 67/155 Installing : sed-4.9-1.fc40.x86_64 68/155 Installing : grep-3.11-8.fc41.x86_64 69/155 Installing : findutils-1:4.9.0-8.fc40.x86_64 70/155 Installing : xz-1:5.4.6-3.fc41.x86_64 71/155 Installing : libmount-2.40.1-1.fc41.x86_64 72/155 Installing : util-linux-core-2.40.1-1.fc41.x86_64 73/155 Installing : libsemanage-3.6-3.fc40.x86_64 74/155 Installing : shadow-utils-2:4.15.1-5.fc41.x86_64 75/155 Running scriptlet: libutempter-1.2.1-13.fc40.x86_64 76/155 Installing : libutempter-1.2.1-13.fc40.x86_64 76/155 Installing : tar-2:1.35-3.fc40.x86_64 77/155 Installing : zstd-1.5.6-1.fc41.x86_64 78/155 Installing : libpsl-0.21.5-3.fc40.x86_64 79/155 Installing : zip-3.0-40.fc40.x86_64 80/155 Installing : cyrus-sasl-lib-2.1.28-22.fc41.x86_64 81/155 Installing : gdbm-1:1.23-6.fc40.x86_64 82/155 Installing : libfdisk-2.40.1-1.fc41.x86_64 83/155 Installing : add-determinism-nopython-0.2.0-9.fc41.x86_64 84/155 Installing : build-reproducibility-srpm-macros-0.2.0-9.fc41.n 85/155 Installing : libxml2-2.12.7-1.fc41.x86_64 86/155 Installing : bzip2-1.0.8-18.fc40.x86_64 87/155 Installing : sqlite-libs-3.45.3-1.fc41.x86_64 88/155 Installing : ed-1.20.2-1.fc41.x86_64 89/155 Installing : patch-2.7.6-24.fc40.x86_64 90/155 Installing : elfutils-default-yama-scope-0.191-7.fc41.noarch 91/155 Running scriptlet: elfutils-default-yama-scope-0.191-7.fc41.noarch 91/155 Installing : cpio-2.15-1.fc40.x86_64 92/155 Installing : diffutils-3.10-5.fc40.x86_64 93/155 Installing : keyutils-libs-1.6.3-3.fc40.x86_64 94/155 Installing : libbrotli-1.1.0-3.fc40.x86_64 95/155 Installing : libffi-3.4.6-1.fc41.x86_64 96/155 Installing : p11-kit-0.25.3-4.fc40.x86_64 97/155 Installing : p11-kit-trust-0.25.3-4.fc40.x86_64 98/155 Running scriptlet: p11-kit-trust-0.25.3-4.fc40.x86_64 98/155 Installing : libgomp-14.1.1-4.fc41.x86_64 99/155 Installing : libnghttp2-1.62.0-1.fc41.x86_64 100/155 Installing : libpkgconf-2.1.1-1.fc41.x86_64 101/155 Installing : pkgconf-2.1.1-1.fc41.x86_64 102/155 Installing : pkgconf-pkg-config-2.1.1-1.fc41.x86_64 103/155 Installing : libtool-ltdl-2.4.7-10.fc40.x86_64 104/155 Installing : libverto-0.3.2-8.fc40.x86_64 105/155 Installing : xxhash-libs-0.8.2-2.fc40.x86_64 106/155 Installing : libssh-config-0.10.6-6.fc41.noarch 107/155 Installing : kernel-srpm-macros-1.0-23.fc41.noarch 108/155 Installing : gnat-srpm-macros-6-5.fc40.noarch 109/155 Installing : ghc-srpm-macros-1.9.1-1.fc41.noarch 110/155 Installing : fpc-srpm-macros-1.3-12.fc40.noarch 111/155 Installing : coreutils-common-9.5-1.fc41.x86_64 112/155 Installing : openssl-libs-1:3.2.1-6.fc41.x86_64 113/155 Installing : coreutils-9.5-1.fc41.x86_64 114/155 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch 115/155 Installing : ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch 115/155 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch 115/155 Installing : krb5-libs-1.21.2-5.fc40.x86_64 116/155 Installing : libarchive-3.7.4-1.fc41.x86_64 117/155 Installing : libtirpc-1.3.4-1.rc3.fc41.x86_64 118/155 Installing : authselect-libs-1.5.0-5.fc41.x86_64 119/155 Installing : gzip-1.13-1.fc40.x86_64 120/155 Installing : cracklib-2.9.11-5.fc40.x86_64 121/155 Installing : libpwquality-1.4.5-9.fc40.x86_64 122/155 Installing : authselect-1.5.0-5.fc41.x86_64 123/155 Installing : libnsl2-2.0.1-1.fc40.x86_64 124/155 Installing : pam-1.6.1-3.fc41.x86_64 125/155 Installing : libssh-0.10.6-6.fc41.x86_64 126/155 Installing : libevent-2.1.12-13.fc41.x86_64 127/155 Installing : openldap-2.6.8-1.fc41.x86_64 128/155 Installing : libcurl-8.8.0-1.fc41.x86_64 129/155 Installing : elfutils-libs-0.191-7.fc41.x86_64 130/155 Installing : elfutils-debuginfod-client-0.191-7.fc41.x86_64 131/155 Installing : binutils-gold-2.42.50-11.fc41.x86_64 132/155 Running scriptlet: binutils-gold-2.42.50-11.fc41.x86_64 132/155 Installing : binutils-2.42.50-11.fc41.x86_64 133/155 Running scriptlet: binutils-2.42.50-11.fc41.x86_64 133/155 Installing : elfutils-0.191-7.fc41.x86_64 134/155 Installing : gdb-minimal-14.2-7.fc41.x86_64 135/155 Installing : debugedit-5.0-16.fc41.x86_64 136/155 Installing : curl-8.8.0-1.fc41.x86_64 137/155 Installing : rpm-sequoia-1.6.0-3.fc41.x86_64 138/155 Installing : rpm-libs-4.19.91-6.fc41.x86_64 139/155 Running scriptlet: rpm-4.19.91-6.fc41.x86_64 140/155 Installing : rpm-4.19.91-6.fc41.x86_64 140/155 Installing : efi-srpm-macros-5-11.fc40.noarch 141/155 Installing : lua-srpm-macros-1-13.fc40.noarch 142/155 Installing : zig-srpm-macros-1-2.fc40.noarch 143/155 Installing : rpm-build-libs-4.19.91-6.fc41.x86_64 144/155 Installing : ansible-srpm-macros-1-15.fc41.noarch 145/155 Installing : fonts-srpm-macros-1:2.0.5-14.fc40.noarch 146/155 Installing : forge-srpm-macros-0.3.1-1.fc41.noarch 147/155 Installing : go-srpm-macros-3.6.0-1.fc41.noarch 148/155 Installing : python-srpm-macros-3.12-9.fc41.noarch 149/155 Installing : pyproject-srpm-macros-1.12.0-1.fc40.noarch 150/155 Installing : redhat-rpm-config-291-1.fc41.noarch 151/155 Installing : rpm-build-4.19.91-6.fc41.x86_64 152/155 Installing : util-linux-2.40.1-1.fc41.x86_64 153/155 Running scriptlet: util-linux-2.40.1-1.fc41.x86_64 153/155 Installing : which-2.21-41.fc40.x86_64 154/155 Installing : info-7.1-2.fc40.x86_64 155/155 Running scriptlet: filesystem-3.18-9.fc41.x86_64 155/155 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch 155/155 Running scriptlet: authselect-libs-1.5.0-5.fc41.x86_64 155/155 Running scriptlet: rpm-4.19.91-6.fc41.x86_64 155/155 Running scriptlet: info-7.1-2.fc40.x86_64 155/155 Installed: add-determinism-nopython-0.2.0-9.fc41.x86_64 alternatives-1.27-1.fc41.x86_64 ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-2.fc41.x86_64 authselect-1.5.0-5.fc41.x86_64 authselect-libs-1.5.0-5.fc41.x86_64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.x86_64 binutils-2.42.50-11.fc41.x86_64 binutils-gold-2.42.50-11.fc41.x86_64 build-reproducibility-srpm-macros-0.2.0-9.fc41.noarch bzip2-1.0.8-18.fc40.x86_64 bzip2-libs-1.0.8-18.fc40.x86_64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-1.fc41.x86_64 coreutils-common-9.5-1.fc41.x86_64 cpio-2.15-1.fc40.x86_64 cracklib-2.9.11-5.fc40.x86_64 crypto-policies-20240521-1.gitf71d135.fc41.noarch curl-8.8.0-1.fc41.x86_64 cyrus-sasl-lib-2.1.28-22.fc41.x86_64 debugedit-5.0-16.fc41.x86_64 diffutils-3.10-5.fc40.x86_64 dwz-0.15-6.fc40.x86_64 ed-1.20.2-1.fc41.x86_64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.x86_64 elfutils-debuginfod-client-0.191-7.fc41.x86_64 elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.x86_64 elfutils-libs-0.191-7.fc41.x86_64 fedora-gpg-keys-41-0.2.noarch fedora-release-41-0.13.noarch fedora-release-common-41-0.13.noarch fedora-release-identity-basic-41-0.13.noarch fedora-repos-41-0.2.noarch fedora-repos-rawhide-41-0.2.noarch file-5.45-5.fc41.x86_64 file-libs-5.45-5.fc41.x86_64 filesystem-3.18-9.fc41.x86_64 findutils-1:4.9.0-8.fc40.x86_64 fonts-srpm-macros-1:2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.x86_64 gdb-minimal-14.2-7.fc41.x86_64 gdbm-1:1.23-6.fc40.x86_64 gdbm-libs-1:1.23-6.fc40.x86_64 ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-18.fc41.x86_64 glibc-common-2.39.9000-18.fc41.x86_64 glibc-gconv-extra-2.39.9000-18.fc41.x86_64 glibc-minimal-langpack-2.39.9000-18.fc41.x86_64 gmp-1:6.3.0-1.fc41.x86_64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-8.fc41.x86_64 gzip-1.13-1.fc40.x86_64 info-7.1-2.fc40.x86_64 jansson-2.13.1-9.fc40.x86_64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.x86_64 krb5-libs-1.21.2-5.fc40.x86_64 libacl-2.3.2-1.fc40.x86_64 libarchive-3.7.4-1.fc41.x86_64 libattr-2.5.2-3.fc40.x86_64 libblkid-2.40.1-1.fc41.x86_64 libbrotli-1.1.0-3.fc40.x86_64 libcap-2.70-1.fc41.x86_64 libcap-ng-0.8.5-1.fc41.x86_64 libcom_err-1.47.0-5.fc40.x86_64 libcurl-8.8.0-1.fc41.x86_64 libeconf-0.6.2-2.fc41.x86_64 libevent-2.1.12-13.fc41.x86_64 libfdisk-2.40.1-1.fc41.x86_64 libffi-3.4.6-1.fc41.x86_64 libgcc-14.1.1-4.fc41.x86_64 libgomp-14.1.1-4.fc41.x86_64 libidn2-2.3.7-1.fc40.x86_64 libmount-2.40.1-1.fc41.x86_64 libnghttp2-1.62.0-1.fc41.x86_64 libnsl2-2.0.1-1.fc40.x86_64 libpkgconf-2.1.1-1.fc41.x86_64 libpsl-0.21.5-3.fc40.x86_64 libpwquality-1.4.5-9.fc40.x86_64 libselinux-3.6-4.fc40.x86_64 libsemanage-3.6-3.fc40.x86_64 libsepol-3.6-3.fc40.x86_64 libsmartcols-2.40.1-1.fc41.x86_64 libssh-0.10.6-6.fc41.x86_64 libssh-config-0.10.6-6.fc41.noarch libstdc++-14.1.1-4.fc41.x86_64 libtasn1-4.19.0-6.fc40.x86_64 libtirpc-1.3.4-1.rc3.fc41.x86_64 libtool-ltdl-2.4.7-10.fc40.x86_64 libunistring-1.1-7.fc41.x86_64 libutempter-1.2.1-13.fc40.x86_64 libuuid-2.40.1-1.fc41.x86_64 libverto-0.3.2-8.fc40.x86_64 libxcrypt-4.4.36-5.fc40.x86_64 libxml2-2.12.7-1.fc41.x86_64 libzstd-1.5.6-1.fc41.x86_64 lua-libs-5.4.6-5.fc40.x86_64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.x86_64 mpfr-4.2.1-4.fc41.x86_64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.x86_64 ocaml-srpm-macros-10-2.fc41.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.8-1.fc41.x86_64 openssl-libs-1:3.2.1-6.fc41.x86_64 p11-kit-0.25.3-4.fc40.x86_64 p11-kit-trust-0.25.3-4.fc40.x86_64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-3.fc41.x86_64 pam-libs-1.6.1-3.fc41.x86_64 patch-2.7.6-24.fc40.x86_64 pcre2-10.43-2.fc41.1.x86_64 pcre2-syntax-10.43-2.fc41.1.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.1-1.fc41.x86_64 pkgconf-m4-2.1.1-1.fc41.noarch pkgconf-pkg-config-2.1.1-1.fc41.x86_64 popt-1.19-6.fc40.x86_64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.14-1.fc41.noarch qt6-srpm-macros-6.7.1-1.fc41.noarch readline-8.2-8.fc40.x86_64 redhat-rpm-config-291-1.fc41.noarch rpm-4.19.91-6.fc41.x86_64 rpm-build-4.19.91-6.fc41.x86_64 rpm-build-libs-4.19.91-6.fc41.x86_64 rpm-libs-4.19.91-6.fc41.x86_64 rpm-sequoia-1.6.0-3.fc41.x86_64 rust-srpm-macros-26.3-1.fc41.noarch sed-4.9-1.fc40.x86_64 setup-2.15.0-3.fc41.noarch shadow-utils-2:4.15.1-5.fc41.x86_64 sqlite-libs-3.45.3-1.fc41.x86_64 systemd-libs-256~rc3-3.fc41.x86_64 tar-2:1.35-3.fc40.x86_64 unzip-6.0-63.fc40.x86_64 util-linux-2.40.1-1.fc41.x86_64 util-linux-core-2.40.1-1.fc41.x86_64 which-2.21-41.fc40.x86_64 xxhash-libs-0.8.2-2.fc40.x86_64 xz-1:5.4.6-3.fc41.x86_64 xz-libs-1:5.4.6-3.fc41.x86_64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.x86_64 zlib-ng-compat-2.1.6-4.fc41.x86_64 zstd-1.5.6-1.fc41.x86_64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-nopython-0.2.0-9.fc41.x86_64 alternatives-1.27-1.fc41.x86_64 ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-2.fc41.x86_64 authselect-1.5.0-5.fc41.x86_64 authselect-libs-1.5.0-5.fc41.x86_64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.x86_64 binutils-2.42.50-11.fc41.x86_64 binutils-gold-2.42.50-11.fc41.x86_64 build-reproducibility-srpm-macros-0.2.0-9.fc41.noarch bzip2-1.0.8-18.fc40.x86_64 bzip2-libs-1.0.8-18.fc40.x86_64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-1.fc41.x86_64 coreutils-common-9.5-1.fc41.x86_64 cpio-2.15-1.fc40.x86_64 cracklib-2.9.11-5.fc40.x86_64 crypto-policies-20240521-1.gitf71d135.fc41.noarch curl-8.8.0-1.fc41.x86_64 cyrus-sasl-lib-2.1.28-22.fc41.x86_64 debugedit-5.0-16.fc41.x86_64 diffutils-3.10-5.fc40.x86_64 dwz-0.15-6.fc40.x86_64 ed-1.20.2-1.fc41.x86_64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.x86_64 elfutils-debuginfod-client-0.191-7.fc41.x86_64 elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.x86_64 elfutils-libs-0.191-7.fc41.x86_64 fedora-gpg-keys-41-0.2.noarch fedora-release-41-0.13.noarch fedora-release-common-41-0.13.noarch fedora-release-identity-basic-41-0.13.noarch fedora-repos-41-0.2.noarch fedora-repos-rawhide-41-0.2.noarch file-5.45-5.fc41.x86_64 file-libs-5.45-5.fc41.x86_64 filesystem-3.18-9.fc41.x86_64 findutils-4.9.0-8.fc40.x86_64 fonts-srpm-macros-2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.x86_64 gdb-minimal-14.2-7.fc41.x86_64 gdbm-1.23-6.fc40.x86_64 gdbm-libs-1.23-6.fc40.x86_64 ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-18.fc41.x86_64 glibc-common-2.39.9000-18.fc41.x86_64 glibc-gconv-extra-2.39.9000-18.fc41.x86_64 glibc-minimal-langpack-2.39.9000-18.fc41.x86_64 gmp-6.3.0-1.fc41.x86_64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-8.fc41.x86_64 gzip-1.13-1.fc40.x86_64 info-7.1-2.fc40.x86_64 jansson-2.13.1-9.fc40.x86_64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.x86_64 krb5-libs-1.21.2-5.fc40.x86_64 libacl-2.3.2-1.fc40.x86_64 libarchive-3.7.4-1.fc41.x86_64 libattr-2.5.2-3.fc40.x86_64 libblkid-2.40.1-1.fc41.x86_64 libbrotli-1.1.0-3.fc40.x86_64 libcap-2.70-1.fc41.x86_64 libcap-ng-0.8.5-1.fc41.x86_64 libcom_err-1.47.0-5.fc40.x86_64 libcurl-8.8.0-1.fc41.x86_64 libeconf-0.6.2-2.fc41.x86_64 libevent-2.1.12-13.fc41.x86_64 libfdisk-2.40.1-1.fc41.x86_64 libffi-3.4.6-1.fc41.x86_64 libgcc-14.1.1-4.fc41.x86_64 libgomp-14.1.1-4.fc41.x86_64 libidn2-2.3.7-1.fc40.x86_64 libmount-2.40.1-1.fc41.x86_64 libnghttp2-1.62.0-1.fc41.x86_64 libnsl2-2.0.1-1.fc40.x86_64 libpkgconf-2.1.1-1.fc41.x86_64 libpsl-0.21.5-3.fc40.x86_64 libpwquality-1.4.5-9.fc40.x86_64 libselinux-3.6-4.fc40.x86_64 libsemanage-3.6-3.fc40.x86_64 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xxhash-libs-0.8.2-2.fc40.x86_64 xz-5.4.6-3.fc41.x86_64 xz-libs-5.4.6-3.fc41.x86_64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.x86_64 zlib-ng-compat-2.1.6-4.fc41.x86_64 zstd-1.5.6-1.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1717113600 Wrote: /builddir/build/SRPMS/python-netpyne-1.0.6-4.fc41.src.rpm Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-39-x86_64-1717188061.300765/root/var/log’: No such file or directory INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1717188061.300765/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-x86_64-1717188061.300765/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1717188061.300765/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-s_w4h724/python-netpyne/python-netpyne.spec) Config(child) 1 minutes 36 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/python-netpyne-1.0.6-4.fc41.src.rpm) Config(fedora-39-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1717188061.300765/root. INFO: reusing tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1717188061.300765/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1717188061.300765/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.20.0-1.fc41.noarch python3-dnf-plugins-core-4.7.0-1.fc41.noarch dnf5-5.2.2.0-1.fc41.x86_64 Finish: chroot init Start: build phase for python-netpyne-1.0.6-4.fc41.src.rpm Start: build setup for python-netpyne-1.0.6-4.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1717113600 Wrote: /builddir/build/SRPMS/python-netpyne-1.0.6-4.fc41.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 74 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 71 kB/s | 3.8 kB 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 58 k perl-threads-shared x86_64 1.68-502.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45 k perl-vars noarch 1.05-507.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13 k pyproject-rpm-macros noarch 1.12.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k python-pip-wheel noarch 24.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 M python-rpm-macros noarch 3.12-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 18 k python3 x86_64 3.12.3-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 27 k python3-libs x86_64 3.12.3-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.8 M python3-packaging noarch 24.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 116 k python3-rpm-generators noarch 14-10.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 30 k python3-rpm-macros noarch 3.12-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13 k readline-devel x86_64 8.2-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 199 k tzdata noarch 2024a-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 431 k xorg-x11-proto-devel noarch 2024.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 266 k Transaction Summary ====================================================================================================================================== Install 124 Packages Total download size: 110 M Installed size: 375 M Downloading Packages: (1/124): annobin-docs-12.54-2.fc41.noarch.rpm 1.5 MB/s | 90 kB 00:00 (2/124): autoconf-2.72-2.fc41.noarch.rpm 20 MB/s | 817 kB 00:00 (3/124): annobin-plugin-gcc-12.54-2.fc41.x86_64 9.2 MB/s | 965 kB 00:00 (4/124): automake-1.16.5-16.fc40.noarch.rpm 38 MB/s | 676 kB 00:00 (5/124): cmake-filesystem-3.28.3-4.fc41.x86_64. 1.2 MB/s | 18 kB 00:00 (6/124): emacs-filesystem-30.0-2.fc41.noarch.rp 484 kB/s | 7.1 kB 00:00 (7/124): add-determinism-0.2.0-9.fc41.x86_64.rp 6.4 MB/s | 907 kB 00:00 (8/124): expat-2.6.2-1.fc41.x86_64.rpm 5.1 MB/s | 113 kB 00:00 (9/124): gc-8.2.2-6.fc40.x86_64.rpm 6.2 MB/s | 110 kB 00:00 (10/124): cpp-14.1.1-4.fc41.x86_64.rpm 146 MB/s | 12 MB 00:00 (11/124): gcc-plugin-annobin-14.1.1-4.fc41.x86_ 2.6 MB/s | 51 kB 00:00 (12/124): glibc-devel-2.39.9000-18.fc41.x86_64. 5.9 MB/s | 122 kB 00:00 (13/124): gcc-c++-14.1.1-4.fc41.x86_64.rpm 133 MB/s | 14 MB 00:00 (14/124): glibc-headers-x86-2.39.9000-18.fc41.n 22 MB/s | 542 kB 00:00 (15/124): groff-base-1.23.0-6.fc40.x86_64.rpm 46 MB/s | 1.1 MB 00:00 (16/124): guile30-3.0.9-1.fc41.x86_64.rpm 156 MB/s | 8.2 MB 00:00 (17/124): iv-0.1-0.9.20200818git14890c4.fc40.x8 33 MB/s | 1.1 MB 00:00 (18/124): iv-devel-0.1-0.9.20200818git14890c4.f 11 MB/s | 180 kB 00:00 (19/124): kernel-headers-6.10.0-0.rc1.17.fc41.x 58 MB/s | 1.5 MB 00:00 (20/124): libICE-1.1.1-3.fc40.x86_64.rpm 5.1 MB/s | 74 kB 00:00 (21/124): libSM-1.2.4-3.fc40.x86_64.rpm 3.0 MB/s | 43 kB 00:00 (22/124): libX11-1.8.9-1.fc41.x86_64.rpm 32 MB/s | 648 kB 00:00 (23/124): libX11-common-1.8.9-1.fc41.noarch.rpm 9.5 MB/s | 145 kB 00:00 (24/124): libX11-xcb-1.8.9-1.fc41.x86_64.rpm 802 kB/s | 12 kB 00:00 (25/124): libX11-devel-1.8.9-1.fc41.x86_64.rpm 35 MB/s | 912 kB 00:00 (26/124): gcc-14.1.1-4.fc41.x86_64.rpm 132 MB/s | 37 MB 00:00 (27/124): libXau-1.0.11-6.fc40.x86_64.rpm 787 kB/s | 32 kB 00:00 (28/124): libXau-devel-1.0.11-6.fc40.x86_64.rpm 287 kB/s | 14 kB 00:00 (29/124): libXext-devel-1.3.6-1.fc40.x86_64.rpm 5.3 MB/s | 72 kB 00:00 (30/124): libXext-1.3.6-1.fc40.x86_64.rpm 2.7 MB/s | 39 kB 00:00 (31/124): libb2-0.98.1-11.fc40.x86_64.rpm 1.8 MB/s | 25 kB 00:00 (32/124): libXt-1.3.0-3.fc40.x86_64.rpm 8.2 MB/s | 177 kB 00:00 (33/124): libmpc-1.3.1-5.fc40.x86_64.rpm 3.5 MB/s | 71 kB 00:00 (34/124): libtool-2.4.7-10.fc40.x86_64.rpm 34 MB/s | 595 kB 00:00 (35/124): libxcb-1.17.0-1.fc41.x86_64.rpm 11 MB/s | 234 kB 00:00 (36/124): libstdc++-devel-14.1.1-4.fc41.x86_64. 85 MB/s | 2.6 MB 00:00 (37/124): libxcrypt-devel-4.4.36-5.fc40.x86_64. 2.0 MB/s | 29 kB 00:00 (38/124): m4-1.4.19-9.fc40.x86_64.rpm 18 MB/s | 298 kB 00:00 (39/124): libxcb-devel-1.17.0-1.fc41.x86_64.rpm 44 MB/s | 1.1 MB 00:00 (40/124): mpdecimal-2.5.1-9.fc40.x86_64.rpm 6.1 MB/s | 89 kB 00:00 (41/124): make-4.4.1-6.fc40.x86_64.rpm 26 MB/s | 580 kB 00:00 (42/124): ncurses-6.4-12.20240127.fc40.x86_64.r 25 MB/s | 416 kB 00:00 (43/124): ncurses-devel-6.4-12.20240127.fc40.x8 31 MB/s | 535 kB 00:00 (44/124): ncurses-c++-libs-6.4-12.20240127.fc40 1.9 MB/s | 38 kB 00:00 (45/124): neuron-8.2.2-9.fc40.x86_64.rpm 59 MB/s | 1.7 MB 00:00 (46/124): perl-AutoLoader-5.74-507.fc41.noarch. 1.5 MB/s | 21 kB 00:00 (47/124): neuron-devel-8.2.2-9.fc40.x86_64.rpm 8.2 MB/s | 165 kB 00:00 (48/124): perl-B-1.88-507.fc41.x86_64.rpm 11 MB/s | 176 kB 00:00 (49/124): perl-Carp-1.54-502.fc40.noarch.rpm 1.5 MB/s | 29 kB 00:00 (50/124): perl-Class-Struct-0.68-507.fc41.noarc 1.5 MB/s | 22 kB 00:00 (51/124): perl-Digest-1.20-502.fc40.noarch.rpm 1.8 MB/s | 25 kB 00:00 (52/124): perl-Data-Dumper-2.188-503.fc40.x86_6 2.7 MB/s | 56 kB 00:00 (53/124): perl-Digest-MD5-2.59-3.fc40.x86_64.rp 1.8 MB/s | 36 kB 00:00 (54/124): perl-DynaLoader-1.54-507.fc41.x86_64. 1.3 MB/s | 26 kB 00:00 (55/124): perl-Errno-1.37-507.fc41.x86_64.rpm 1.0 MB/s | 15 kB 00:00 (56/124): perl-Encode-3.21-505.fc41.x86_64.rpm 46 MB/s | 1.0 MB 00:00 (57/124): perl-Fcntl-1.15-507.fc41.x86_64.rpm 1.4 MB/s | 20 kB 00:00 (58/124): perl-Exporter-5.78-3.fc40.noarch.rpm 1.5 MB/s | 31 kB 00:00 (59/124): perl-File-Basename-2.86-507.fc41.noar 913 kB/s | 17 kB 00:00 (60/124): perl-File-Compare-1.100.700-507.fc41. 698 kB/s | 13 kB 00:00 (61/124): perl-File-Copy-2.41-507.fc41.noarch.r 1.3 MB/s | 20 kB 00:00 (62/124): perl-File-Find-1.43-507.fc41.noarch.r 1.7 MB/s | 25 kB 00:00 (63/124): perl-File-Temp-0.231.100-503.fc40.noa 4.0 MB/s | 59 kB 00:00 (64/124): perl-File-Path-2.18-503.fc40.noarch.r 1.8 MB/s | 35 kB 00:00 (65/124): perl-File-stat-1.13-507.fc41.noarch.r 913 kB/s | 17 kB 00:00 (66/124): perl-FileHandle-2.05-507.fc41.noarch. 822 kB/s | 16 kB 00:00 (67/124): perl-Getopt-Long-2.57-4.fc41.noarch.r 4.3 MB/s | 63 kB 00:00 (68/124): perl-Getopt-Std-1.13-507.fc41.noarch. 1.1 MB/s | 16 kB 00:00 (69/124): perl-IO-1.52-507.fc41.x86_64.rpm 5.5 MB/s | 78 kB 00:00 (70/124): perl-HTTP-Tiny-0.088-5.fc40.noarch.rp 2.8 MB/s | 56 kB 00:00 (71/124): perl-IO-Socket-IP-0.42-2.fc40.noarch. 2.1 MB/s | 42 kB 00:00 (72/124): perl-IPC-Open3-1.22-507.fc41.noarch.r 1.5 MB/s | 22 kB 00:00 (73/124): perl-IO-Socket-SSL-2.085-1.fc40.noarc 11 MB/s | 225 kB 00:00 (74/124): perl-MIME-Base64-3.16-503.fc40.x86_64 2.1 MB/s | 30 kB 00:00 (75/124): perl-Net-SSLeay-1.94-3.fc40.x86_64.rp 23 MB/s | 366 kB 00:00 (76/124): perl-Mozilla-CA-20240313-1.fc41.noarc 725 kB/s | 14 kB 00:00 (77/124): perl-POSIX-2.13-507.fc41.x86_64.rpm 4.8 MB/s | 96 kB 00:00 (78/124): perl-Pod-Escapes-1.07-503.fc40.noarch 1.4 MB/s | 20 kB 00:00 (79/124): perl-PathTools-3.89-502.fc40.x86_64.r 3.8 MB/s | 83 kB 00:00 (80/124): perl-Pod-Perldoc-3.28.01-503.fc40.noa 3.9 MB/s | 79 kB 00:00 (81/124): perl-Pod-Usage-2.03-504.fc41.noarch.r 2.6 MB/s | 40 kB 00:00 (82/124): perl-Pod-Simple-3.45-6.fc40.noarch.rp 10 MB/s | 209 kB 00:00 (83/124): perl-Scalar-List-Utils-1.63-503.fc40. 4.8 MB/s | 73 kB 00:00 (84/124): perl-Socket-2.038-1.fc41.x86_64.rpm 3.9 MB/s | 55 kB 00:00 (85/124): perl-SelectSaver-1.02-507.fc41.noarch 630 kB/s | 12 kB 00:00 (86/124): perl-Storable-3.32-502.fc40.x86_64.rp 5.0 MB/s | 98 kB 00:00 (87/124): perl-Term-ANSIColor-5.01-504.fc40.noa 3.2 MB/s | 48 kB 00:00 (88/124): perl-Symbol-1.09-507.fc41.noarch.rpm 739 kB/s | 14 kB 00:00 (89/124): perl-Term-Cap-1.18-503.fc40.noarch.rp 1.5 MB/s | 22 kB 00:00 (90/124): perl-Text-Tabs+Wrap-2024.001-1.fc41.n 1.5 MB/s | 22 kB 00:00 (91/124): perl-Text-ParseWords-3.31-502.fc40.no 854 kB/s | 16 kB 00:00 (92/124): perl-Thread-Queue-3.14-503.fc40.noarc 1.1 MB/s | 21 kB 00:00 (93/124): perl-URI-5.28-1.fc41.noarch.rpm 8.2 MB/s | 120 kB 00:00 (94/124): perl-Time-Local-1.350-5.fc40.noarch.r 1.7 MB/s | 34 kB 00:00 (95/124): perl-base-2.27-507.fc41.noarch.rpm 1.2 MB/s | 16 kB 00:00 (96/124): perl-if-0.61.000-507.fc41.noarch.rpm 998 kB/s | 14 kB 00:00 (97/124): perl-constant-1.33-503.fc40.noarch.rp 1.2 MB/s | 23 kB 00:00 (98/124): perl-interpreter-5.38.2-507.fc41.x86_ 3.5 MB/s | 72 kB 00:00 (99/124): perl-libnet-3.15-503.fc40.noarch.rpm 6.1 MB/s | 122 kB 00:00 (100/124): perl-locale-1.10-507.fc41.noarch.rpm 978 kB/s | 14 kB 00:00 (101/124): perl-overload-1.37-507.fc41.noarch.r 3.0 MB/s | 46 kB 00:00 (102/124): perl-libs-5.38.2-507.fc41.x86_64.rpm 64 MB/s | 2.2 MB 00:00 (103/124): perl-mro-1.28-507.fc41.x86_64.rpm 1.3 MB/s | 29 kB 00:00 (104/124): perl-parent-0.241-502.fc40.noarch.rp 1.1 MB/s | 15 kB 00:00 (105/124): perl-overloading-0.02-507.fc41.noarc 687 kB/s | 13 kB 00:00 (106/124): perl-podlators-5.01-502.fc40.noarch. 5.6 MB/s | 121 kB 00:00 (107/124): perl-threads-shared-1.68-502.fc40.x8 3.2 MB/s | 45 kB 00:00 (108/124): perl-threads-2.36-503.fc40.x86_64.rp 3.0 MB/s | 58 kB 00:00 (109/124): perl-vars-1.05-507.fc41.noarch.rpm 1.0 MB/s | 13 kB 00:00 (110/124): pyproject-rpm-macros-1.12.0-1.fc40.n 2.1 MB/s | 41 kB 00:00 (111/124): python-rpm-macros-3.12-9.fc41.noarch 1.1 MB/s | 18 kB 00:00 (112/124): python-pip-wheel-24.0-2.fc41.noarch. 46 MB/s | 1.5 MB 00:00 (113/124): python3-3.12.3-2.fc41.x86_64.rpm 1.4 MB/s | 27 kB 00:00 (114/124): python3-devel-3.12.3-2.fc41.x86_64.r 17 MB/s | 275 kB 00:00 (115/124): python3-dill-0.3.8-1.fc40.noarch.rpm 12 MB/s | 240 kB 00:00 (116/124): python3-neuron-8.2.2-9.fc40.x86_64.r 31 MB/s | 799 kB 00:00 (117/124): python3-packaging-24.0-1.fc41.noarch 5.3 MB/s | 116 kB 00:00 (118/124): python3-rpm-generators-14-10.fc40.no 2.0 MB/s | 30 kB 00:00 (119/124): python3-rpm-macros-3.12-9.fc41.noarc 658 kB/s | 13 kB 00:00 (120/124): python3-setuptools-69.2.0-3.fc41.noa 65 MB/s | 1.4 MB 00:00 (121/124): tzdata-2024a-8.fc41.noarch.rpm 26 MB/s | 431 kB 00:00 (122/124): readline-devel-8.2-8.fc40.x86_64.rpm 9.7 MB/s | 199 kB 00:00 (123/124): xorg-x11-proto-devel-2024.1-2.fc41.n 11 MB/s | 266 kB 00:00 (124/124): python3-libs-3.12.3-2.fc41.x86_64.rp 67 MB/s | 8.8 MB 00:00 -------------------------------------------------------------------------------- Total 101 MB/s | 110 MB 00:01 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : xorg-x11-proto-devel-2024.1-2.fc41.noarch 1/124 Installing : python-rpm-macros-3.12-9.fc41.noarch 2/124 Installing : libmpc-1.3.1-5.fc40.x86_64 3/124 Installing : python3-rpm-macros-3.12-9.fc41.noarch 4/124 Installing : libXau-1.0.11-6.fc40.x86_64 5/124 Installing : libxcb-1.17.0-1.fc41.x86_64 6/124 Installing : libICE-1.1.1-3.fc40.x86_64 7/124 Installing : libSM-1.2.4-3.fc40.x86_64 8/124 Installing : libXau-devel-1.0.11-6.fc40.x86_64 9/124 Installing : libxcb-devel-1.17.0-1.fc41.x86_64 10/124 Installing : pyproject-rpm-macros-1.12.0-1.fc40.noarch 11/124 Installing : cpp-14.1.1-4.fc41.x86_64 12/124 Installing : tzdata-2024a-8.fc41.noarch 13/124 Installing : python-pip-wheel-24.0-2.fc41.noarch 14/124 Installing : ncurses-c++-libs-6.4-12.20240127.fc40.x86_64 15/124 Installing : ncurses-devel-6.4-12.20240127.fc40.x86_64 16/124 Installing : readline-devel-8.2-8.fc40.x86_64 17/124 Installing : ncurses-6.4-12.20240127.fc40.x86_64 18/124 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Installing : perl-FileHandle-2.05-507.fc41.noarch 36/124 Installing : perl-Data-Dumper-2.188-503.fc40.x86_64 37/124 Installing : perl-libnet-3.15-503.fc40.noarch 38/124 Installing : perl-AutoLoader-5.74-507.fc41.noarch 39/124 Installing : perl-URI-5.28-1.fc41.noarch 40/124 Installing : perl-Text-Tabs+Wrap-2024.001-1.fc41.noarch 41/124 Installing : perl-Mozilla-CA-20240313-1.fc41.noarch 42/124 Installing : perl-if-0.61.000-507.fc41.noarch 43/124 Installing : perl-locale-1.10-507.fc41.noarch 44/124 Installing : perl-IO-Socket-IP-0.42-2.fc40.noarch 45/124 Installing : perl-Time-Local-2:1.350-5.fc40.noarch 46/124 Installing : perl-File-Path-2.18-503.fc40.noarch 47/124 Installing : perl-IO-Socket-SSL-2.085-1.fc40.noarch 48/124 Installing : perl-Net-SSLeay-1.94-3.fc40.x86_64 49/124 Installing : perl-Pod-Escapes-1:1.07-503.fc40.noarch 50/124 Installing : perl-Class-Struct-0.68-507.fc41.noarch 51/124 Installing : perl-Term-ANSIColor-5.01-504.fc40.noarch 52/124 Installing : perl-POSIX-2.13-507.fc41.x86_64 53/124 Installing : perl-IPC-Open3-1.22-507.fc41.noarch 54/124 Installing : perl-File-Temp-1:0.231.100-503.fc40.noarch 55/124 Installing : perl-HTTP-Tiny-0.088-5.fc40.noarch 56/124 Installing : perl-Term-Cap-1.18-503.fc40.noarch 57/124 Installing : perl-Pod-Simple-1:3.45-6.fc40.noarch 58/124 Installing : perl-Socket-4:2.038-1.fc41.x86_64 59/124 Installing : perl-SelectSaver-1.02-507.fc41.noarch 60/124 Installing : perl-Symbol-1.09-507.fc41.noarch 61/124 Installing : perl-File-stat-1.13-507.fc41.noarch 62/124 Installing : perl-podlators-1:5.01-502.fc40.noarch 63/124 Installing : perl-Pod-Perldoc-3.28.01-503.fc40.noarch 64/124 Installing : perl-Fcntl-1.15-507.fc41.x86_64 65/124 Installing : perl-Text-ParseWords-3.31-502.fc40.noarch 66/124 Installing : perl-base-2.27-507.fc41.noarch 67/124 Installing : perl-mro-1.28-507.fc41.x86_64 68/124 Installing : perl-IO-1.52-507.fc41.x86_64 69/124 Installing : perl-overloading-0.02-507.fc41.noarch 70/124 Installing : perl-Pod-Usage-4:2.03-504.fc41.noarch 71/124 Installing : perl-Errno-1.37-507.fc41.x86_64 72/124 Installing : perl-File-Basename-2.86-507.fc41.noarch 73/124 Installing : perl-Getopt-Std-1.13-507.fc41.noarch 74/124 Installing : perl-MIME-Base64-3.16-503.fc40.x86_64 75/124 Installing : perl-Scalar-List-Utils-5:1.63-503.fc40.x86_64 76/124 Installing : perl-constant-1.33-503.fc40.noarch 77/124 Installing : perl-Storable-1:3.32-502.fc40.x86_64 78/124 Installing : perl-overload-1.37-507.fc41.noarch 79/124 Installing : perl-parent-1:0.241-502.fc40.noarch 80/124 Installing : perl-vars-1.05-507.fc41.noarch 81/124 Installing : perl-Getopt-Long-1:2.57-4.fc41.noarch 82/124 Installing : perl-Carp-1.54-502.fc40.noarch 83/124 Installing : perl-Exporter-5.78-3.fc40.noarch 84/124 Installing : perl-PathTools-3.89-502.fc40.x86_64 85/124 Installing : perl-DynaLoader-1.54-507.fc41.x86_64 86/124 Installing : perl-Encode-4:3.21-505.fc41.x86_64 87/124 Installing : perl-libs-4:5.38.2-507.fc41.x86_64 88/124 Installing : perl-interpreter-4:5.38.2-507.fc41.x86_64 89/124 Installing : perl-threads-1:2.36-503.fc40.x86_64 90/124 Installing : perl-threads-shared-1.68-502.fc40.x86_64 91/124 Installing : perl-Thread-Queue-3.14-503.fc40.noarch 92/124 Installing : perl-File-Compare-1.100.700-507.fc41.noarch 93/124 Installing : perl-File-Copy-2.41-507.fc41.noarch 94/124 Installing : perl-File-Find-1.43-507.fc41.noarch 95/124 Installing : glibc-headers-x86-2.39.9000-18.fc41.noarch 96/124 Installing : libxcrypt-devel-4.4.36-5.fc40.x86_64 97/124 Installing : glibc-devel-2.39.9000-18.fc41.x86_64 98/124 Installing : gc-8.2.2-6.fc40.x86_64 99/124 Installing : guile30-3.0.9-1.fc41.x86_64 100/124 Installing : make-1:4.4.1-6.fc40.x86_64 101/124 Installing : gcc-14.1.1-4.fc41.x86_64 102/124 Running scriptlet: gcc-14.1.1-4.fc41.x86_64 102/124 Installing : gcc-c++-14.1.1-4.fc41.x86_64 103/124 Installing : expat-2.6.2-1.fc41.x86_64 104/124 Installing : python3-3.12.3-2.fc41.x86_64 105/124 Installing : python3-libs-3.12.3-2.fc41.x86_64 106/124 Installing : neuron-8.2.2-9.fc40.x86_64 107/124 Installing : python3-packaging-24.0-1.fc41.noarch 108/124 Installing : python3-rpm-generators-14-10.fc40.noarch 109/124 Installing : emacs-filesystem-1:30.0-2.fc41.noarch 110/124 Installing : autoconf-2.72-2.fc41.noarch 111/124 Installing : automake-1.16.5-16.fc40.noarch 112/124 Installing : libtool-2.4.7-10.fc40.x86_64 113/124 Installing : cmake-filesystem-3.28.3-4.fc41.x86_64 114/124 Installing : iv-devel-0.1-0.9.20200818git14890c4.fc40.x86_64 115/124 Installing : annobin-docs-12.54-2.fc41.noarch 116/124 Installing : annobin-plugin-gcc-12.54-2.fc41.x86_64 117/124 Running scriptlet: annobin-plugin-gcc-12.54-2.fc41.x86_64 117/124 Installing : neuron-devel-8.2.2-9.fc40.x86_64 118/124 Installing : python3-devel-3.12.3-2.fc41.x86_64 119/124 Installing : python3-neuron-8.2.2-9.fc40.x86_64 120/124 Installing : add-determinism-0.2.0-9.fc41.x86_64 121/124 Installing : python3-dill-0.3.8-1.fc40.noarch 122/124 Installing : python3-setuptools-69.2.0-3.fc41.noarch 123/124 Installing : gcc-plugin-annobin-14.1.1-4.fc41.x86_64 124/124 Running scriptlet: gcc-plugin-annobin-14.1.1-4.fc41.x86_64 124/124 Installed: add-determinism-0.2.0-9.fc41.x86_64 annobin-docs-12.54-2.fc41.noarch annobin-plugin-gcc-12.54-2.fc41.x86_64 autoconf-2.72-2.fc41.noarch automake-1.16.5-16.fc40.noarch cmake-filesystem-3.28.3-4.fc41.x86_64 cpp-14.1.1-4.fc41.x86_64 emacs-filesystem-1:30.0-2.fc41.noarch expat-2.6.2-1.fc41.x86_64 gc-8.2.2-6.fc40.x86_64 gcc-14.1.1-4.fc41.x86_64 gcc-c++-14.1.1-4.fc41.x86_64 gcc-plugin-annobin-14.1.1-4.fc41.x86_64 glibc-devel-2.39.9000-18.fc41.x86_64 glibc-headers-x86-2.39.9000-18.fc41.noarch groff-base-1.23.0-6.fc40.x86_64 guile30-3.0.9-1.fc41.x86_64 iv-0.1-0.9.20200818git14890c4.fc40.x86_64 iv-devel-0.1-0.9.20200818git14890c4.fc40.x86_64 kernel-headers-6.10.0-0.rc1.17.fc41.x86_64 libICE-1.1.1-3.fc40.x86_64 libSM-1.2.4-3.fc40.x86_64 libX11-1.8.9-1.fc41.x86_64 libX11-common-1.8.9-1.fc41.noarch libX11-devel-1.8.9-1.fc41.x86_64 libX11-xcb-1.8.9-1.fc41.x86_64 libXau-1.0.11-6.fc40.x86_64 libXau-devel-1.0.11-6.fc40.x86_64 libXext-1.3.6-1.fc40.x86_64 libXext-devel-1.3.6-1.fc40.x86_64 libXt-1.3.0-3.fc40.x86_64 libb2-0.98.1-11.fc40.x86_64 libmpc-1.3.1-5.fc40.x86_64 libstdc++-devel-14.1.1-4.fc41.x86_64 libtool-2.4.7-10.fc40.x86_64 libxcb-1.17.0-1.fc41.x86_64 libxcb-devel-1.17.0-1.fc41.x86_64 libxcrypt-devel-4.4.36-5.fc40.x86_64 m4-1.4.19-9.fc40.x86_64 make-1:4.4.1-6.fc40.x86_64 mpdecimal-2.5.1-9.fc40.x86_64 ncurses-6.4-12.20240127.fc40.x86_64 ncurses-c++-libs-6.4-12.20240127.fc40.x86_64 ncurses-devel-6.4-12.20240127.fc40.x86_64 neuron-8.2.2-9.fc40.x86_64 neuron-devel-8.2.2-9.fc40.x86_64 perl-AutoLoader-5.74-507.fc41.noarch perl-B-1.88-507.fc41.x86_64 perl-Carp-1.54-502.fc40.noarch perl-Class-Struct-0.68-507.fc41.noarch perl-Data-Dumper-2.188-503.fc40.x86_64 perl-Digest-1.20-502.fc40.noarch perl-Digest-MD5-2.59-3.fc40.x86_64 perl-DynaLoader-1.54-507.fc41.x86_64 perl-Encode-4:3.21-505.fc41.x86_64 perl-Errno-1.37-507.fc41.x86_64 perl-Exporter-5.78-3.fc40.noarch perl-Fcntl-1.15-507.fc41.x86_64 perl-File-Basename-2.86-507.fc41.noarch perl-File-Compare-1.100.700-507.fc41.noarch perl-File-Copy-2.41-507.fc41.noarch perl-File-Find-1.43-507.fc41.noarch perl-File-Path-2.18-503.fc40.noarch perl-File-Temp-1:0.231.100-503.fc40.noarch perl-File-stat-1.13-507.fc41.noarch perl-FileHandle-2.05-507.fc41.noarch perl-Getopt-Long-1:2.57-4.fc41.noarch perl-Getopt-Std-1.13-507.fc41.noarch perl-HTTP-Tiny-0.088-5.fc40.noarch perl-IO-1.52-507.fc41.x86_64 perl-IO-Socket-IP-0.42-2.fc40.noarch perl-IO-Socket-SSL-2.085-1.fc40.noarch perl-IPC-Open3-1.22-507.fc41.noarch perl-MIME-Base64-3.16-503.fc40.x86_64 perl-Mozilla-CA-20240313-1.fc41.noarch perl-Net-SSLeay-1.94-3.fc40.x86_64 perl-POSIX-2.13-507.fc41.x86_64 perl-PathTools-3.89-502.fc40.x86_64 perl-Pod-Escapes-1:1.07-503.fc40.noarch perl-Pod-Perldoc-3.28.01-503.fc40.noarch perl-Pod-Simple-1:3.45-6.fc40.noarch perl-Pod-Usage-4:2.03-504.fc41.noarch perl-Scalar-List-Utils-5:1.63-503.fc40.x86_64 perl-SelectSaver-1.02-507.fc41.noarch perl-Socket-4:2.038-1.fc41.x86_64 perl-Storable-1:3.32-502.fc40.x86_64 perl-Symbol-1.09-507.fc41.noarch perl-Term-ANSIColor-5.01-504.fc40.noarch perl-Term-Cap-1.18-503.fc40.noarch perl-Text-ParseWords-3.31-502.fc40.noarch perl-Text-Tabs+Wrap-2024.001-1.fc41.noarch perl-Thread-Queue-3.14-503.fc40.noarch perl-Time-Local-2:1.350-5.fc40.noarch perl-URI-5.28-1.fc41.noarch perl-base-2.27-507.fc41.noarch perl-constant-1.33-503.fc40.noarch perl-if-0.61.000-507.fc41.noarch perl-interpreter-4:5.38.2-507.fc41.x86_64 perl-libnet-3.15-503.fc40.noarch perl-libs-4:5.38.2-507.fc41.x86_64 perl-locale-1.10-507.fc41.noarch perl-mro-1.28-507.fc41.x86_64 perl-overload-1.37-507.fc41.noarch perl-overloading-0.02-507.fc41.noarch perl-parent-1:0.241-502.fc40.noarch perl-podlators-1:5.01-502.fc40.noarch perl-threads-1:2.36-503.fc40.x86_64 perl-threads-shared-1.68-502.fc40.x86_64 perl-vars-1.05-507.fc41.noarch pyproject-rpm-macros-1.12.0-1.fc40.noarch python-pip-wheel-24.0-2.fc41.noarch python-rpm-macros-3.12-9.fc41.noarch python3-3.12.3-2.fc41.x86_64 python3-devel-3.12.3-2.fc41.x86_64 python3-dill-0.3.8-1.fc40.noarch python3-libs-3.12.3-2.fc41.x86_64 python3-neuron-8.2.2-9.fc40.x86_64 python3-packaging-24.0-1.fc41.noarch python3-rpm-generators-14-10.fc40.noarch python3-rpm-macros-3.12-9.fc41.noarch python3-setuptools-69.2.0-3.fc41.noarch readline-devel-8.2-8.fc40.x86_64 tzdata-2024a-8.fc41.noarch xorg-x11-proto-devel-2024.1-2.fc41.noarch Complete! Finish: build setup for python-netpyne-1.0.6-4.fc41.src.rpm Start: rpmbuild python-netpyne-1.0.6-4.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1717113600 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.bR9lBN + umask 022 + cd /builddir/build/BUILD/python-netpyne-1.0.6-build + test -d /builddir/build/BUILD/python-netpyne-1.0.6-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-netpyne-1.0.6-build + /usr/bin/rm -rf /builddir/build/BUILD/python-netpyne-1.0.6-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-netpyne-1.0.6-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-netpyne-1.0.6-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.uyfFiL + umask 022 + cd /builddir/build/BUILD/python-netpyne-1.0.6-build + cd /builddir/build/BUILD/python-netpyne-1.0.6-build + rm -rf netpyne-1.0.6 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/netpyne-1.0.6.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd netpyne-1.0.6 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/767.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-fix-py312-remove-imp.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/815.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + sed -e 's/matplotlib<=3.5.1/matplotlib/' -e 's/"future",//' -i setup.py + find . -type f -name '*.py' -exec sed -i '/^#![ ]*\/usr\/bin\/env.*$/ d' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.NL5xoD + umask 022 + cd /builddir/build/BUILD/python-netpyne-1.0.6-build + cd netpyne-1.0.6 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/pyproject-wheeldir --output /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 69.2.0) Handling wheel from default build backend Requirement not satisfied: wheel Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-netpyne-1.0.6-4.fc41.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 87 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 71 kB/s | 3.8 kB 00:00 fedora 142 kB/s | 25 kB 00:00 updates 301 kB/s | 21 kB 00:00 Package gcc-c++-14.1.1-4.fc41.x86_64 is already installed. Package neuron-devel-8.2.2-9.fc40.x86_64 is already installed. Package pyproject-rpm-macros-1.12.0-1.fc40.noarch is already installed. Package python3-devel-3.12.3-2.fc41.x86_64 is already installed. Package python3-devel-3.12.3-2.fc41.x86_64 is already installed. Package python3-dill-0.3.8-1.fc40.noarch is already installed. Package python3-neuron-8.2.2-9.fc40.x86_64 is already installed. Package python3-setuptools-69.2.0-3.fc41.noarch is already installed. Package python3-packaging-24.0-1.fc41.noarch is already installed. Package python3-setuptools-69.2.0-3.fc41.noarch is already installed. Dependencies resolved. ============================================================================================================= Package Arch Version Repository Size ============================================================================================================= Installing: python3-pip noarch 24.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.9 M python3-wheel noarch 1:0.43.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 149 k Transaction Summary ============================================================================================================= Install 2 Packages Total download size: 3.1 M Installed size: 15 M Downloading Packages: (1/2): python3-wheel-0.43.0-1.fc41.noarch.rpm 1.9 MB/s | 149 kB 00:00 (2/2): python3-pip-24.0-2.fc41.noarch.rpm 8.0 MB/s | 2.9 MB 00:00 -------------------------------------------------------------------------------- Total 8.3 MB/s | 3.1 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : python3-wheel-1:0.43.0-1.fc41.noarch 1/2 Installing : python3-pip-24.0-2.fc41.noarch 2/2 Running scriptlet: python3-pip-24.0-2.fc41.noarch 2/2 Installed: python3-pip-24.0-2.fc41.noarch python3-wheel-1:0.43.0-1.fc41.noarch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1717113600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.lbOO8r + umask 022 + cd /builddir/build/BUILD/python-netpyne-1.0.6-build + cd netpyne-1.0.6 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/pyproject-wheeldir --output /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 69.2.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.43.0) running egg_info creating netpyne.egg-info writing netpyne.egg-info/PKG-INFO writing dependency_links to netpyne.egg-info/dependency_links.txt writing requirements to netpyne.egg-info/requires.txt writing top-level names to netpyne.egg-info/top_level.txt writing manifest file 'netpyne.egg-info/SOURCES.txt' reading manifest file 'netpyne.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 2: 'recursive-exclude' expects ... warning: no previously-included files matching '*' found under directory 'examples' warning: no previously-included files matching 'x86_64' found anywhere in distribution warning: no previously-included files matching 'x86_64/*' found anywhere in distribution warning: no previously-included files matching '.libs*' found anywhere in distribution warning: no previously-included files matching '.libs/*' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'netpyne.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing netpyne.egg-info/PKG-INFO writing dependency_links to netpyne.egg-info/dependency_links.txt writing requirements to netpyne.egg-info/requires.txt writing top-level names to netpyne.egg-info/top_level.txt reading manifest file 'netpyne.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 2: 'recursive-exclude' expects ... warning: no previously-included files matching '*' found under directory 'examples' warning: no previously-included files matching 'x86_64' found anywhere in distribution warning: no previously-included files matching 'x86_64/*' found anywhere in distribution warning: no previously-included files matching '.libs*' found anywhere in distribution warning: no previously-included files matching '.libs/*' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'netpyne.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/netpyne-1.0.6.dist-info' Handling numpy from hook generated metadata: Requires-Dist (netpyne) Requirement not satisfied: numpy Handling scipy from hook generated metadata: Requires-Dist (netpyne) Requirement not satisfied: scipy Handling matplotlib from hook generated metadata: Requires-Dist (netpyne) Requirement not satisfied: matplotlib Handling matplotlib-scalebar from hook generated metadata: Requires-Dist (netpyne) Requirement not satisfied: matplotlib-scalebar Handling pandas from hook generated metadata: Requires-Dist (netpyne) Requirement not satisfied: pandas Handling bokeh from hook generated metadata: Requires-Dist (netpyne) Requirement not satisfied: bokeh Handling schema from hook generated metadata: Requires-Dist (netpyne) Requirement not satisfied: schema Handling lfpykit from hook generated metadata: Requires-Dist (netpyne) Requirement not satisfied: lfpykit + cat /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-buildrequires + rm -rfv netpyne-1.0.6.dist-info/ removed 'netpyne-1.0.6.dist-info/LICENSE' removed 'netpyne-1.0.6.dist-info/METADATA' removed 'netpyne-1.0.6.dist-info/top_level.txt' removed directory 'netpyne-1.0.6.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-netpyne-1.0.6-4.fc41.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 103 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 43 kB/s | 3.8 kB 00:00 fedora 277 kB/s | 25 kB 00:00 updates 123 kB/s | 21 kB 00:00 Package gcc-c++-14.1.1-4.fc41.x86_64 is already installed. Package neuron-devel-8.2.2-9.fc40.x86_64 is already installed. Package pyproject-rpm-macros-1.12.0-1.fc40.noarch is already installed. Package python3-devel-3.12.3-2.fc41.x86_64 is already installed. Package python3-devel-3.12.3-2.fc41.x86_64 is already installed. Package python3-dill-0.3.8-1.fc40.noarch is already installed. Package python3-neuron-8.2.2-9.fc40.x86_64 is already installed. Package python3-setuptools-69.2.0-3.fc41.noarch is already installed. Package python3-packaging-24.0-1.fc41.noarch is already installed. Package python3-pip-24.0-2.fc41.noarch is already installed. Package python3-setuptools-69.2.0-3.fc41.noarch is already installed. Package python3-wheel-1:0.43.0-1.fc41.noarch is already installed. Dependencies resolved. ============================================================================================================================================= Package Arch Version Repository Size ============================================================================================================================================= Installing: python3-bokeh noarch 2.3.0-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.0 M python3-lfpykit noarch 0.5.1-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 138 k python3-matplotlib x86_64 3.9.0-2.fc41 copr_base 4.5 M python3-matplotlib-scalebar noarch 0.8.1^20230706git2c57173-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 44 k python3-numpy x86_64 1:1.26.4-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.2 M python3-pandas x86_64 2.2.1-3.fc41 copr_base 7.8 M python3-schema noarch 0.7.7-1.fc41 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k python3-tkinter x86_64 3.12.3-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 385 k python3-tornado x86_64 6.3.3-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 850 k python3-typing-extensions noarch 4.12.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88 k python3-urllib3 noarch 1.26.18-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 254 k tcl x86_64 1:8.6.14-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M tk x86_64 1:8.6.14-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 M xml-common noarch 0.6.3-63.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 31 k Transaction Summary ============================================================================================================================================= Install 84 Packages Total download size: 80 M Installed size: 384 M Downloading Packages: (1/84): graphite2-1.3.14-15.fc40.x86_64.rpm 7.4 MB/s | 95 kB 00:00 (2/84): python3-contourpy-1.2.1-1.fc41.x86_64.r 14 MB/s | 260 kB 00:00 (3/84): python3-Bottleneck-1.3.7-5.fc40.x86_64. 7.0 MB/s | 163 kB 00:00 (4/84): python3-fonttools-4.52.4-1.fc41.x86_64. 230 MB/s | 2.8 MB 00:00 (5/84): python3-matplotlib-data-3.9.0-2.fc41.no 44 MB/s | 509 kB 00:00 (6/84): python3-matplotlib-tk-3.9.0-2.fc41.x86_ 8.2 MB/s | 111 kB 00:00 (7/84): python3-matplotlib-data-fonts-3.9.0-2.f 70 MB/s | 2.3 MB 00:00 (8/84): python3-matplotlib-3.9.0-2.fc41.x86_64. 93 MB/s | 4.5 MB 00:00 (9/84): python3-pandas-2.2.1-3.fc41.x86_64.rpm 191 MB/s | 7.8 MB 00:00 (10/84): default-fonts-core-sans-4.0-13.fc41.no 615 kB/s | 25 kB 00:00 (11/84): abattis-cantarell-vf-fonts-0.301-12.fc 1.2 MB/s | 120 kB 00:00 (12/84): flexiblas-3.4.4-1.fc41.x86_64.rpm 1.3 MB/s | 25 kB 00:00 (13/84): dejavu-sans-fonts-2.37-23.fc40.noarch. 26 MB/s | 1.3 MB 00:00 (14/84): cairo-1.18.0-3.fc40.x86_64.rpm 5.5 MB/s | 709 kB 00:00 (15/84): flexiblas-openblas-openmp-3.4.4-1.fc41 1.2 MB/s | 17 kB 00:00 (16/84): fonts-filesystem-2.0.5-14.fc40.noarch. 606 kB/s | 8.2 kB 00:00 (17/84): fontconfig-2.15.0-5.fc41.x86_64.rpm 13 MB/s | 256 kB 00:00 (18/84): fribidi-1.0.14-1.fc41.x86_64.rpm 6.1 MB/s | 91 kB 00:00 (19/84): freetype-2.13.2-5.fc40.x86_64.rpm 19 MB/s | 410 kB 00:00 (20/84): gnutls-3.8.5-2.fc41.x86_64.rpm 51 MB/s | 1.1 MB 00:00 (21/84): flexiblas-netlib-3.4.4-1.fc41.x86_64.r 33 MB/s | 3.2 MB 00:00 (22/84): google-noto-fonts-common-20240401-1.fc 1.0 MB/s | 17 kB 00:00 (23/84): glib2-2.80.2-1.fc41.x86_64.rpm 66 MB/s | 3.0 MB 00:00 (24/84): google-noto-sans-vf-fonts-20240401-1.f 25 MB/s | 594 kB 00:00 (25/84): harfbuzz-8.4.0-1.fc41.x86_64.rpm 42 MB/s | 1.0 MB 00:00 (26/84): jbigkit-libs-2.1-29.fc40.x86_64.rpm 2.6 MB/s | 53 kB 00:00 (27/84): libXrender-0.9.11-6.fc40.x86_64.rpm 1.8 MB/s | 27 kB 00:00 (28/84): lcms2-2.16-3.fc40.x86_64.rpm 9.0 MB/s | 180 kB 00:00 (29/84): libXft-2.3.8-6.fc40.x86_64.rpm 3.5 MB/s | 72 kB 00:00 (30/84): libjpeg-turbo-3.0.2-2.fc41.x86_64.rpm 14 MB/s | 226 kB 00:00 (31/84): libgfortran-14.1.1-4.fc41.x86_64.rpm 40 MB/s | 934 kB 00:00 (32/84): libimagequant-4.0.3-3.fc40.x86_64.rpm 14 MB/s | 306 kB 00:00 (33/84): libqhull_r-8.0.2-4.fc40.x86_64.rpm 13 MB/s | 201 kB 00:00 (34/84): liblerc-4.0.0-6.fc40.x86_64.rpm 10 MB/s | 210 kB 00:00 (35/84): libpng-1.6.40-3.fc40.x86_64.rpm 6.1 MB/s | 120 kB 00:00 (36/84): libtiff-4.6.0-2.fc40.x86_64.rpm 22 MB/s | 332 kB 00:00 (37/84): libquadmath-14.1.1-4.fc41.x86_64.rpm 9.9 MB/s | 198 kB 00:00 (38/84): libraqm-0.8.0-7.fc40.x86_64.rpm 1.0 MB/s | 20 kB 00:00 (39/84): libyaml-0.2.5-14.fc40.x86_64.rpm 4.1 MB/s | 59 kB 00:00 (40/84): libwebp-1.4.0-1.fc41.x86_64.rpm 14 MB/s | 291 kB 00:00 (41/84): libxslt-1.1.39-3.fc40.x86_64.rpm 9.3 MB/s | 189 kB 00:00 (42/84): nettle-3.9.1-6.fc40.x86_64.rpm 19 MB/s | 425 kB 00:00 (43/84): openblas-0.3.26-4.fc40.x86_64.rpm 1.8 MB/s | 39 kB 00:00 (44/84): openblas-openmp-0.3.26-4.fc40.x86_64.r 146 MB/s | 5.1 MB 00:00 (45/84): openjpeg2-2.5.2-1.fc41.x86_64.rpm 9.3 MB/s | 186 kB 00:00 (46/84): pixman-0.43.4-1.fc41.x86_64.rpm 14 MB/s | 293 kB 00:00 (47/84): python3-appdirs-1.4.4-13.fc40.noarch.r 1.2 MB/s | 23 kB 00:00 (48/84): python3-brotli-1.1.0-3.fc40.x86_64.rpm 17 MB/s | 339 kB 00:00 (49/84): python3-cairo-1.25.1-3.fc40.x86_64.rpm 5.2 MB/s | 125 kB 00:00 (50/84): python3-charset-normalizer-3.3.2-3.fc4 5.2 MB/s | 99 kB 00:00 (51/84): python3-bokeh-2.3.0-13.fc40.noarch.rpm 129 MB/s | 7.0 MB 00:00 (52/84): python3-cycler-0.11.0-11.fc40.noarch.r 863 kB/s | 21 kB 00:00 (53/84): python3-dateutil-2.8.2-13.fc40.noarch. 14 MB/s | 345 kB 00:00 (54/84): python3-fs-2.4.16-7.fc40.noarch.rpm 17 MB/s | 272 kB 00:00 (55/84): python3-kiwisolver-1.4.5-3.fc40.x86_64 4.7 MB/s | 67 kB 00:00 (56/84): python3-idna-3.7-1.fc41.noarch.rpm 5.6 MB/s | 110 kB 00:00 (57/84): python3-jinja2-3.1.4-2.fc41.noarch.rpm 22 MB/s | 465 kB 00:00 (58/84): python3-lfpykit-0.5.1-3.fc40.noarch.rp 6.8 MB/s | 138 kB 00:00 (59/84): python3-markupsafe-2.1.5-1.fc41.x86_64 1.8 MB/s | 30 kB 00:00 (60/84): python3-lxml-5.2.1-1.fc41.x86_64.rpm 48 MB/s | 1.3 MB 00:00 (61/84): python3-meautility-1.5.1-10.fc40.noarc 5.4 MB/s | 78 kB 00:00 (62/84): python3-matplotlib-scalebar-0.8.1^2023 2.3 MB/s | 44 kB 00:00 (63/84): python3-numexpr-2.8.5-5.fc41.x86_64.rp 8.1 MB/s | 161 kB 00:00 (64/84): python3-numpy-f2py-1.26.4-4.fc41.x86_6 29 MB/s | 492 kB 00:00 (65/84): python3-olefile-0.47-3.fc40.noarch.rpm 3.4 MB/s | 73 kB 00:00 (66/84): python3-pillow-10.3.0-1.fc41.x86_64.rp 51 MB/s | 906 kB 00:00 (67/84): python3-numpy-1.26.4-4.fc41.x86_64.rpm 134 MB/s | 7.2 MB 00:00 (68/84): python3-platformdirs-3.11.0-3.fc40.noa 2.3 MB/s | 40 kB 00:00 (69/84): python3-pillow-tk-10.3.0-1.fc41.x86_64 1.5 MB/s | 29 kB 00:00 (70/84): python3-pytz-2024.1-1.fc40.noarch.rpm 4.1 MB/s | 59 kB 00:00 (71/84): python3-pooch-1.8.1-2.fc41.noarch.rpm 6.1 MB/s | 122 kB 00:00 (72/84): python3-pyparsing-3.1.2-2.fc41.noarch. 12 MB/s | 261 kB 00:00 (73/84): python3-schema-0.7.7-1.fc41.noarch.rpm 2.9 MB/s | 42 kB 00:00 (74/84): python3-pyyaml-6.0.1-14.fc40.x86_64.rp 11 MB/s | 221 kB 00:00 (75/84): python3-requests-2.31.0-5.fc41.noarch. 7.2 MB/s | 142 kB 00:00 (76/84): python3-tkinter-3.12.3-2.fc41.x86_64.r 24 MB/s | 385 kB 00:00 (77/84): python3-six-1.16.0-14.fc40.noarch.rpm 2.1 MB/s | 41 kB 00:00 (78/84): python3-typing-extensions-4.12.0-1.fc4 5.8 MB/s | 88 kB 00:00 (79/84): python3-tornado-6.3.3-3.fc40.x86_64.rp 37 MB/s | 850 kB 00:00 (80/84): python3-urllib3-1.26.18-3.fc40.noarch. 12 MB/s | 254 kB 00:00 (81/84): tcl-8.6.14-1.fc41.x86_64.rpm 53 MB/s | 1.1 MB 00:00 (82/84): xml-common-0.6.3-63.fc40.noarch.rpm 2.1 MB/s | 31 kB 00:00 (83/84): tk-8.6.14-1.fc41.x86_64.rpm 59 MB/s | 1.6 MB 00:00 (84/84): python3-scipy-1.11.3-10.fc41.x86_64.rp 160 MB/s | 16 MB 00:00 -------------------------------------------------------------------------------- Total 107 MB/s | 80 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : fonts-filesystem-1:2.0.5-14.fc40.noarch 1/84 Installing : libgfortran-14.1.1-4.fc41.x86_64 2/84 Installing : python3-matplotlib-data-fonts-3.9.0-2.fc41.noarch 3/84 Installing : python3-matplotlib-data-3.9.0-2.fc41.noarch 4/84 Installing : tcl-1:8.6.14-1.fc41.x86_64 5/84 Installing : python3-six-1.16.0-14.fc40.noarch 6/84 Installing : python3-dateutil-1:2.8.2-13.fc40.noarch 7/84 Installing : python3-idna-3.7-1.fc41.noarch 8/84 Installing : libwebp-1.4.0-1.fc41.x86_64 9/84 Installing : libpng-2:1.6.40-3.fc40.x86_64 10/84 Installing : libjpeg-turbo-3.0.2-2.fc41.x86_64 11/84 Installing : libXrender-0.9.11-6.fc40.x86_64 12/84 Installing : python3-urllib3-1.26.18-3.fc40.noarch 13/84 Installing : abattis-cantarell-vf-fonts-0.301-12.fc40.noarch 14/84 Installing : dejavu-sans-fonts-2.37-23.fc40.noarch 15/84 Running scriptlet: xml-common-0.6.3-63.fc40.noarch 16/84 Installing : xml-common-0.6.3-63.fc40.noarch 16/84 Installing : python3-typing-extensions-4.12.0-1.fc41.noarch 17/84 Installing : python3-tornado-6.3.3-3.fc40.x86_64 18/84 Installing : python3-pytz-2024.1-1.fc40.noarch 19/84 Installing : python3-pyparsing-3.1.2-2.fc41.noarch 20/84 Installing : python3-platformdirs-3.11.0-3.fc40.noarch 21/84 Installing : python3-olefile-0.47-3.fc40.noarch 22/84 Installing : python3-markupsafe-2.1.5-1.fc41.x86_64 23/84 Installing : python3-jinja2-3.1.4-2.fc41.noarch 24/84 Installing : python3-kiwisolver-1.4.5-3.fc40.x86_64 25/84 Installing : python3-cycler-0.11.0-11.fc40.noarch 26/84 Installing : python3-charset-normalizer-3.3.2-3.fc40.noarch 27/84 Installing : python3-requests-2.31.0-5.fc41.noarch 28/84 Installing : python3-pooch-1.8.1-2.fc41.noarch 29/84 Installing : python3-brotli-1.1.0-3.fc40.x86_64 30/84 Installing : python3-appdirs-1.4.4-13.fc40.noarch 31/84 Installing : python3-fs-2.4.16-7.fc40.noarch 32/84 Installing : pixman-0.43.4-1.fc41.x86_64 33/84 Installing : openjpeg2-2.5.2-1.fc41.x86_64 34/84 Installing : openblas-0.3.26-4.fc40.x86_64 35/84 Installing : openblas-openmp-0.3.26-4.fc40.x86_64 36/84 Installing : nettle-3.9.1-6.fc40.x86_64 37/84 Installing : gnutls-3.8.5-2.fc41.x86_64 38/84 Installing : glib2-2.80.2-1.fc41.x86_64 39/84 Installing : libyaml-0.2.5-14.fc40.x86_64 40/84 Installing : python3-pyyaml-6.0.1-14.fc40.x86_64 41/84 Installing : libxslt-1.1.39-3.fc40.x86_64 42/84 Installing : python3-lxml-5.2.1-1.fc41.x86_64 43/84 Installing : libquadmath-14.1.1-4.fc41.x86_64 44/84 Installing : flexiblas-netlib-3.4.4-1.fc41.x86_64 45/84 Installing : flexiblas-openblas-openmp-3.4.4-1.fc41.x86_64 46/84 Installing : flexiblas-3.4.4-1.fc41.x86_64 47/84 Installing : python3-numpy-1:1.26.4-4.fc41.x86_64 48/84 Installing : python3-contourpy-1.2.1-1.fc41.x86_64 49/84 Installing : python3-numexpr-2.8.5-5.fc41.x86_64 50/84 Installing : python3-numpy-f2py-1:1.26.4-4.fc41.x86_64 51/84 Installing : python3-scipy-1.11.3-10.fc41.x86_64 52/84 Installing : python3-Bottleneck-1.3.7-5.fc40.x86_64 53/84 Installing : python3-fonttools-4.52.4-1.fc41.x86_64 54/84 Installing : libqhull_r-1:8.0.2-4.fc40.x86_64 55/84 Installing : liblerc-4.0.0-6.fc40.x86_64 56/84 Installing : libimagequant-4.0.3-3.fc40.x86_64 57/84 Installing : lcms2-2.16-3.fc40.x86_64 58/84 Installing : jbigkit-libs-2.1-29.fc40.x86_64 59/84 Installing : libtiff-4.6.0-2.fc40.x86_64 60/84 Installing : google-noto-fonts-common-20240401-1.fc41.noarch 61/84 Installing : google-noto-sans-vf-fonts-20240401-1.fc41.noarch 62/84 Installing : default-fonts-core-sans-4.0-13.fc41.noarch 63/84 Installing : fribidi-1.0.14-1.fc41.x86_64 64/84 Installing : graphite2-1.3.14-15.fc40.x86_64 65/84 Installing : cairo-1.18.0-3.fc40.x86_64 66/84 Installing : harfbuzz-8.4.0-1.fc41.x86_64 67/84 Installing : freetype-2.13.2-5.fc40.x86_64 68/84 Installing : fontconfig-2.15.0-5.fc41.x86_64 69/84 Running scriptlet: fontconfig-2.15.0-5.fc41.x86_64 69/84 Installing : libXft-2.3.8-6.fc40.x86_64 70/84 Running scriptlet: tk-1:8.6.14-1.fc41.x86_64 71/84 Installing : tk-1:8.6.14-1.fc41.x86_64 71/84 Installing : python3-tkinter-3.12.3-2.fc41.x86_64 72/84 Installing : libraqm-0.8.0-7.fc40.x86_64 73/84 Installing : python3-pillow-10.3.0-1.fc41.x86_64 74/84 Installing : python3-pillow-tk-10.3.0-1.fc41.x86_64 75/84 Installing : python3-cairo-1.25.1-3.fc40.x86_64 76/84 Installing : python3-matplotlib-3.9.0-2.fc41.x86_64 77/84 Installing : python3-matplotlib-tk-3.9.0-2.fc41.x86_64 78/84 Installing : python3-pandas-2.2.1-3.fc41.x86_64 79/84 Installing : python3-meautility-1.5.1-10.fc40.noarch 80/84 Installing : python3-lfpykit-0.5.1-3.fc40.noarch 81/84 Installing : python3-bokeh-2.3.0-13.fc40.noarch 82/84 Installing : python3-matplotlib-scalebar-0.8.1^20230706git2c571 83/84 Installing : python3-schema-0.7.7-1.fc41.noarch 84/84 Running scriptlet: fontconfig-2.15.0-5.fc41.x86_64 84/84 Running scriptlet: python3-schema-0.7.7-1.fc41.noarch 84/84 Installed: abattis-cantarell-vf-fonts-0.301-12.fc40.noarch cairo-1.18.0-3.fc40.x86_64 default-fonts-core-sans-4.0-13.fc41.noarch dejavu-sans-fonts-2.37-23.fc40.noarch flexiblas-3.4.4-1.fc41.x86_64 flexiblas-netlib-3.4.4-1.fc41.x86_64 flexiblas-openblas-openmp-3.4.4-1.fc41.x86_64 fontconfig-2.15.0-5.fc41.x86_64 fonts-filesystem-1:2.0.5-14.fc40.noarch freetype-2.13.2-5.fc40.x86_64 fribidi-1.0.14-1.fc41.x86_64 glib2-2.80.2-1.fc41.x86_64 gnutls-3.8.5-2.fc41.x86_64 google-noto-fonts-common-20240401-1.fc41.noarch google-noto-sans-vf-fonts-20240401-1.fc41.noarch graphite2-1.3.14-15.fc40.x86_64 harfbuzz-8.4.0-1.fc41.x86_64 jbigkit-libs-2.1-29.fc40.x86_64 lcms2-2.16-3.fc40.x86_64 libXft-2.3.8-6.fc40.x86_64 libXrender-0.9.11-6.fc40.x86_64 libgfortran-14.1.1-4.fc41.x86_64 libimagequant-4.0.3-3.fc40.x86_64 libjpeg-turbo-3.0.2-2.fc41.x86_64 liblerc-4.0.0-6.fc40.x86_64 libpng-2:1.6.40-3.fc40.x86_64 libqhull_r-1:8.0.2-4.fc40.x86_64 libquadmath-14.1.1-4.fc41.x86_64 libraqm-0.8.0-7.fc40.x86_64 libtiff-4.6.0-2.fc40.x86_64 libwebp-1.4.0-1.fc41.x86_64 libxslt-1.1.39-3.fc40.x86_64 libyaml-0.2.5-14.fc40.x86_64 nettle-3.9.1-6.fc40.x86_64 openblas-0.3.26-4.fc40.x86_64 openblas-openmp-0.3.26-4.fc40.x86_64 openjpeg2-2.5.2-1.fc41.x86_64 pixman-0.43.4-1.fc41.x86_64 python3-Bottleneck-1.3.7-5.fc40.x86_64 python3-appdirs-1.4.4-13.fc40.noarch python3-bokeh-2.3.0-13.fc40.noarch python3-brotli-1.1.0-3.fc40.x86_64 python3-cairo-1.25.1-3.fc40.x86_64 python3-charset-normalizer-3.3.2-3.fc40.noarch python3-contourpy-1.2.1-1.fc41.x86_64 python3-cycler-0.11.0-11.fc40.noarch python3-dateutil-1:2.8.2-13.fc40.noarch python3-fonttools-4.52.4-1.fc41.x86_64 python3-fs-2.4.16-7.fc40.noarch python3-idna-3.7-1.fc41.noarch python3-jinja2-3.1.4-2.fc41.noarch python3-kiwisolver-1.4.5-3.fc40.x86_64 python3-lfpykit-0.5.1-3.fc40.noarch python3-lxml-5.2.1-1.fc41.x86_64 python3-markupsafe-2.1.5-1.fc41.x86_64 python3-matplotlib-3.9.0-2.fc41.x86_64 python3-matplotlib-data-3.9.0-2.fc41.noarch python3-matplotlib-data-fonts-3.9.0-2.fc41.noarch python3-matplotlib-scalebar-0.8.1^20230706git2c57173-6.fc40.noarch python3-matplotlib-tk-3.9.0-2.fc41.x86_64 python3-meautility-1.5.1-10.fc40.noarch python3-numexpr-2.8.5-5.fc41.x86_64 python3-numpy-1:1.26.4-4.fc41.x86_64 python3-numpy-f2py-1:1.26.4-4.fc41.x86_64 python3-olefile-0.47-3.fc40.noarch python3-pandas-2.2.1-3.fc41.x86_64 python3-pillow-10.3.0-1.fc41.x86_64 python3-pillow-tk-10.3.0-1.fc41.x86_64 python3-platformdirs-3.11.0-3.fc40.noarch python3-pooch-1.8.1-2.fc41.noarch python3-pyparsing-3.1.2-2.fc41.noarch python3-pytz-2024.1-1.fc40.noarch python3-pyyaml-6.0.1-14.fc40.x86_64 python3-requests-2.31.0-5.fc41.noarch python3-schema-0.7.7-1.fc41.noarch python3-scipy-1.11.3-10.fc41.x86_64 python3-six-1.16.0-14.fc40.noarch python3-tkinter-3.12.3-2.fc41.x86_64 python3-tornado-6.3.3-3.fc40.x86_64 python3-typing-extensions-4.12.0-1.fc41.noarch python3-urllib3-1.26.18-3.fc40.noarch tcl-1:8.6.14-1.fc41.x86_64 tk-1:8.6.14-1.fc41.x86_64 xml-common-0.6.3-63.fc40.noarch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1717113600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.r8SRFL + umask 022 + cd /builddir/build/BUILD/python-netpyne-1.0.6-build + cd netpyne-1.0.6 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/pyproject-wheeldir --output /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 69.2.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.43.0) running egg_info writing netpyne.egg-info/PKG-INFO writing dependency_links to netpyne.egg-info/dependency_links.txt writing requirements to netpyne.egg-info/requires.txt writing top-level names to netpyne.egg-info/top_level.txt reading manifest file 'netpyne.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 2: 'recursive-exclude' expects ... warning: no previously-included files matching '*' found under directory 'examples' warning: no previously-included files matching 'x86_64' found anywhere in distribution warning: no previously-included files matching 'x86_64/*' found anywhere in distribution warning: no previously-included files matching '.libs*' found anywhere in distribution warning: no previously-included files matching '.libs/*' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'netpyne.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing netpyne.egg-info/PKG-INFO writing dependency_links to netpyne.egg-info/dependency_links.txt writing requirements to netpyne.egg-info/requires.txt writing top-level names to netpyne.egg-info/top_level.txt reading manifest file 'netpyne.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 2: 'recursive-exclude' expects ... warning: no previously-included files matching '*' found under directory 'examples' warning: no previously-included files matching 'x86_64' found anywhere in distribution warning: no previously-included files matching 'x86_64/*' found anywhere in distribution warning: no previously-included files matching '.libs*' found anywhere in distribution warning: no previously-included files matching '.libs/*' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'netpyne.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/netpyne-1.0.6.dist-info' Handling numpy from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: numpy (installed: numpy 1.26.4) Handling scipy from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: scipy (installed: scipy 1.11.3) Handling matplotlib from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: matplotlib (installed: matplotlib 3.9.0) Handling matplotlib-scalebar from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: matplotlib-scalebar (installed: matplotlib-scalebar 0.8.1) Handling pandas from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: pandas (installed: pandas 2.2.1) Handling bokeh from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: bokeh (installed: bokeh 2.3.0) Handling schema from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: schema (installed: schema 0.7.7) Handling lfpykit from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: lfpykit (installed: lfpykit 0.5.1) + cat /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-buildrequires + rm -rfv netpyne-1.0.6.dist-info/ removed 'netpyne-1.0.6.dist-info/LICENSE' removed 'netpyne-1.0.6.dist-info/METADATA' removed 'netpyne-1.0.6.dist-info/top_level.txt' removed directory 'netpyne-1.0.6.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-netpyne-1.0.6-4.fc41.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 96 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 62 kB/s | 3.8 kB 00:00 fedora 254 kB/s | 25 kB 00:00 updates 465 kB/s | 21 kB 00:00 Package gcc-c++-14.1.1-4.fc41.x86_64 is already installed. Package neuron-devel-8.2.2-9.fc40.x86_64 is already installed. Package pyproject-rpm-macros-1.12.0-1.fc40.noarch is already installed. Package python3-devel-3.12.3-2.fc41.x86_64 is already installed. Package python3-devel-3.12.3-2.fc41.x86_64 is already installed. Package python3-dill-0.3.8-1.fc40.noarch is already installed. Package python3-neuron-8.2.2-9.fc40.x86_64 is already installed. Package python3-setuptools-69.2.0-3.fc41.noarch is already installed. Package python3-bokeh-2.3.0-13.fc40.noarch is already installed. Package python3-lfpykit-0.5.1-3.fc40.noarch is already installed. Package python3-matplotlib-3.9.0-2.fc41.x86_64 is already installed. Package python3-matplotlib-scalebar-0.8.1^20230706git2c57173-6.fc40.noarch is already installed. Package python3-numpy-1:1.26.4-4.fc41.x86_64 is already installed. Package python3-packaging-24.0-1.fc41.noarch is already installed. Package python3-pandas-2.2.1-3.fc41.x86_64 is already installed. Package python3-pip-24.0-2.fc41.noarch is already installed. Package python3-schema-0.7.7-1.fc41.noarch is already installed. Package python3-scipy-1.11.3-10.fc41.x86_64 is already installed. Package python3-setuptools-69.2.0-3.fc41.noarch is already installed. Package python3-wheel-1:0.43.0-1.fc41.noarch is already installed. Dependencies resolved. Nothing to do. Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1717113600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.LLvAzN + umask 022 + cd /builddir/build/BUILD/python-netpyne-1.0.6-build + cd netpyne-1.0.6 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/pyproject-wheeldir --output /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 69.2.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.43.0) running egg_info writing netpyne.egg-info/PKG-INFO writing dependency_links to netpyne.egg-info/dependency_links.txt writing requirements to netpyne.egg-info/requires.txt writing top-level names to netpyne.egg-info/top_level.txt reading manifest file 'netpyne.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 2: 'recursive-exclude' expects ... warning: no previously-included files matching '*' found under directory 'examples' warning: no previously-included files matching 'x86_64' found anywhere in distribution warning: no previously-included files matching 'x86_64/*' found anywhere in distribution warning: no previously-included files matching '.libs*' found anywhere in distribution warning: no previously-included files matching '.libs/*' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'netpyne.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) running dist_info writing netpyne.egg-info/PKG-INFO writing dependency_links to netpyne.egg-info/dependency_links.txt writing requirements to netpyne.egg-info/requires.txt writing top-level names to netpyne.egg-info/top_level.txt reading manifest file 'netpyne.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 2: 'recursive-exclude' expects ... warning: no previously-included files matching '*' found under directory 'examples' warning: no previously-included files matching 'x86_64' found anywhere in distribution warning: no previously-included files matching 'x86_64/*' found anywhere in distribution warning: no previously-included files matching '.libs*' found anywhere in distribution warning: no previously-included files matching '.libs/*' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'netpyne.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/netpyne-1.0.6.dist-info' Handling numpy from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: numpy (installed: numpy 1.26.4) Handling scipy from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: scipy (installed: scipy 1.11.3) Handling matplotlib from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: matplotlib (installed: matplotlib 3.9.0) Handling matplotlib-scalebar from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: matplotlib-scalebar (installed: matplotlib-scalebar 0.8.1) Handling pandas from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: pandas (installed: pandas 2.2.1) Handling bokeh from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: bokeh (installed: bokeh 2.3.0) Handling schema from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: schema (installed: schema 0.7.7) Handling lfpykit from hook generated metadata: Requires-Dist (netpyne) Requirement satisfied: lfpykit (installed: lfpykit 0.5.1) + cat /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-buildrequires + rm -rfv netpyne-1.0.6.dist-info/ removed 'netpyne-1.0.6.dist-info/LICENSE' removed 'netpyne-1.0.6.dist-info/METADATA' removed 'netpyne-1.0.6.dist-info/top_level.txt' removed directory 'netpyne-1.0.6.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.nL5QnS + umask 022 + cd /builddir/build/BUILD/python-netpyne-1.0.6-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd netpyne-1.0.6 + mkdir -p /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/pyproject-wheeldir Processing /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir/pip-modern-metadata-tkle88e5/netpyne.egg-info writing /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir/pip-modern-metadata-tkle88e5/netpyne.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir/pip-modern-metadata-tkle88e5/netpyne.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir/pip-modern-metadata-tkle88e5/netpyne.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir/pip-modern-metadata-tkle88e5/netpyne.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir/pip-modern-metadata-tkle88e5/netpyne.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir/pip-modern-metadata-tkle88e5/netpyne.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 2: 'recursive-exclude' expects ... warning: no previously-included files matching '*' found under directory 'examples' warning: no previously-included files matching 'x86_64' found anywhere in distribution warning: no previously-included files matching 'x86_64/*' found anywhere in distribution warning: no previously-included files matching '.libs*' found anywhere in distribution warning: no previously-included files matching '.libs/*' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution adding license file 'LICENSE' writing manifest file '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir/pip-modern-metadata-tkle88e5/netpyne.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir/pip-modern-metadata-tkle88e5/netpyne-1.0.6.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: netpyne Building wheel for netpyne (pyproject.toml): started Running command Building wheel for netpyne (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/netpyne copying netpyne/__init__.py -> build/lib/netpyne creating build/lib/netpyne/tests copying netpyne/tests/__init__.py -> build/lib/netpyne/tests copying netpyne/tests/checks.py -> build/lib/netpyne/tests copying netpyne/tests/tests.py -> build/lib/netpyne/tests copying netpyne/tests/validate_tests.py -> build/lib/netpyne/tests creating build/lib/netpyne/support copying netpyne/support/nml_reader.py -> build/lib/netpyne/support copying netpyne/support/__init__.py -> build/lib/netpyne/support copying netpyne/support/bsmart.py -> build/lib/netpyne/support copying netpyne/support/filter.py -> build/lib/netpyne/support copying netpyne/support/morlet.py -> build/lib/netpyne/support copying netpyne/support/morphology.py -> build/lib/netpyne/support copying netpyne/support/recxelectrode.py -> build/lib/netpyne/support copying netpyne/support/scalebar.py -> build/lib/netpyne/support copying netpyne/support/stackedBarGraph.py -> build/lib/netpyne/support creating build/lib/netpyne/specs copying netpyne/specs/__init__.py -> build/lib/netpyne/specs copying netpyne/specs/dicts.py -> build/lib/netpyne/specs copying netpyne/specs/netParams.py -> build/lib/netpyne/specs copying netpyne/specs/simConfig.py -> build/lib/netpyne/specs copying netpyne/specs/utils.py -> build/lib/netpyne/specs creating build/lib/netpyne/sim copying netpyne/sim/validator.py -> build/lib/netpyne/sim copying netpyne/sim/__init__.py -> build/lib/netpyne/sim copying netpyne/sim/gather.py -> build/lib/netpyne/sim copying netpyne/sim/load.py -> build/lib/netpyne/sim copying netpyne/sim/run.py -> build/lib/netpyne/sim copying netpyne/sim/save.py -> build/lib/netpyne/sim copying netpyne/sim/setup.py -> build/lib/netpyne/sim copying netpyne/sim/utils.py -> build/lib/netpyne/sim copying netpyne/sim/wrappers.py -> build/lib/netpyne/sim creating build/lib/netpyne/plotting copying netpyne/plotting/plotCSD.py -> build/lib/netpyne/plotting copying netpyne/plotting/plotLFPLocations.py -> build/lib/netpyne/plotting copying netpyne/plotting/plotLFPSpectrogram.py -> build/lib/netpyne/plotting copying netpyne/plotting/plotRaster.py -> build/lib/netpyne/plotting copying netpyne/plotting/plotSpikeFreq.py -> build/lib/netpyne/plotting copying netpyne/plotting/plotSpikeHist.py -> build/lib/netpyne/plotting copying netpyne/plotting/plotTimeSeries.py -> build/lib/netpyne/plotting copying netpyne/plotting/plotTimeSeriesPSD.py -> build/lib/netpyne/plotting copying netpyne/plotting/plotter.py -> build/lib/netpyne/plotting copying netpyne/plotting/__init__.py -> build/lib/netpyne/plotting copying netpyne/plotting/plotShape.py -> build/lib/netpyne/plotting creating build/lib/netpyne/network copying netpyne/network/__init__.py -> build/lib/netpyne/network copying netpyne/network/conn.py -> build/lib/netpyne/network copying netpyne/network/modify.py -> build/lib/netpyne/network copying netpyne/network/netrxd.py -> build/lib/netpyne/network copying netpyne/network/network.py -> build/lib/netpyne/network copying netpyne/network/pop.py -> build/lib/netpyne/network copying netpyne/network/shape.py -> build/lib/netpyne/network copying netpyne/network/stim.py -> build/lib/netpyne/network copying netpyne/network/subconn.py -> build/lib/netpyne/network creating build/lib/netpyne/metadata copying netpyne/metadata/__init__.py -> build/lib/netpyne/metadata copying netpyne/metadata/api.py -> build/lib/netpyne/metadata copying netpyne/metadata/metadata.py -> build/lib/netpyne/metadata creating build/lib/netpyne/conversion copying netpyne/conversion/sonataImport.py -> build/lib/netpyne/conversion copying netpyne/conversion/__init__.py -> build/lib/netpyne/conversion copying netpyne/conversion/excel.py -> build/lib/netpyne/conversion copying netpyne/conversion/neuromlFormat.py -> build/lib/netpyne/conversion copying netpyne/conversion/neuronPyHoc.py -> build/lib/netpyne/conversion copying netpyne/conversion/pythonScript.py -> build/lib/netpyne/conversion creating build/lib/netpyne/cell copying netpyne/cell/NML2Cell.py -> build/lib/netpyne/cell copying netpyne/cell/NML2SpikeSource.py -> build/lib/netpyne/cell copying netpyne/cell/__init__.py -> build/lib/netpyne/cell copying netpyne/cell/cell.py -> build/lib/netpyne/cell copying netpyne/cell/compartCell.py -> build/lib/netpyne/cell copying netpyne/cell/inputs.py -> build/lib/netpyne/cell copying netpyne/cell/pointCell.py -> build/lib/netpyne/cell creating build/lib/netpyne/batch copying netpyne/batch/__init__.py -> build/lib/netpyne/batch copying netpyne/batch/asd_parallel.py -> build/lib/netpyne/batch copying netpyne/batch/batch.py -> build/lib/netpyne/batch copying netpyne/batch/evol.py -> build/lib/netpyne/batch copying netpyne/batch/grid.py -> build/lib/netpyne/batch copying netpyne/batch/optuna_parallel.py -> build/lib/netpyne/batch copying netpyne/batch/sbi_parallel.py -> build/lib/netpyne/batch copying netpyne/batch/utils.py -> build/lib/netpyne/batch creating build/lib/netpyne/analysis copying netpyne/analysis/__init__.py -> build/lib/netpyne/analysis copying netpyne/analysis/mapping.py -> build/lib/netpyne/analysis copying netpyne/analysis/csd.py -> build/lib/netpyne/analysis copying netpyne/analysis/dipole.py -> build/lib/netpyne/analysis copying netpyne/analysis/filter.py -> build/lib/netpyne/analysis copying netpyne/analysis/info.py -> build/lib/netpyne/analysis copying netpyne/analysis/interactive.py -> build/lib/netpyne/analysis copying netpyne/analysis/lfp.py -> build/lib/netpyne/analysis copying netpyne/analysis/lfp_orig.py -> build/lib/netpyne/analysis copying netpyne/analysis/network.py -> build/lib/netpyne/analysis copying netpyne/analysis/rxd.py -> build/lib/netpyne/analysis copying netpyne/analysis/spikes.py -> build/lib/netpyne/analysis copying netpyne/analysis/spikes_legacy.py -> build/lib/netpyne/analysis copying netpyne/analysis/tools.py -> build/lib/netpyne/analysis copying netpyne/analysis/traces.py -> build/lib/netpyne/analysis copying netpyne/analysis/utils.py -> build/lib/netpyne/analysis copying netpyne/analysis/wrapper.py -> build/lib/netpyne/analysis installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/netpyne creating build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/wrapper.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/utils.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/traces.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/tools.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/spikes_legacy.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/spikes.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/rxd.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/network.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/lfp_orig.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/lfp.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/interactive.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/info.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/filter.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/dipole.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/csd.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/mapping.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis copying build/lib/netpyne/analysis/__init__.py -> build/bdist.linux-x86_64/wheel/netpyne/analysis creating build/bdist.linux-x86_64/wheel/netpyne/batch copying build/lib/netpyne/batch/utils.py -> build/bdist.linux-x86_64/wheel/netpyne/batch copying build/lib/netpyne/batch/sbi_parallel.py -> build/bdist.linux-x86_64/wheel/netpyne/batch copying build/lib/netpyne/batch/optuna_parallel.py -> build/bdist.linux-x86_64/wheel/netpyne/batch copying build/lib/netpyne/batch/grid.py -> build/bdist.linux-x86_64/wheel/netpyne/batch copying build/lib/netpyne/batch/evol.py -> build/bdist.linux-x86_64/wheel/netpyne/batch copying build/lib/netpyne/batch/batch.py -> build/bdist.linux-x86_64/wheel/netpyne/batch copying build/lib/netpyne/batch/asd_parallel.py -> build/bdist.linux-x86_64/wheel/netpyne/batch copying build/lib/netpyne/batch/__init__.py -> build/bdist.linux-x86_64/wheel/netpyne/batch creating build/bdist.linux-x86_64/wheel/netpyne/cell copying build/lib/netpyne/cell/pointCell.py -> build/bdist.linux-x86_64/wheel/netpyne/cell copying build/lib/netpyne/cell/inputs.py -> build/bdist.linux-x86_64/wheel/netpyne/cell copying build/lib/netpyne/cell/compartCell.py -> build/bdist.linux-x86_64/wheel/netpyne/cell copying build/lib/netpyne/cell/cell.py -> build/bdist.linux-x86_64/wheel/netpyne/cell copying build/lib/netpyne/cell/__init__.py -> build/bdist.linux-x86_64/wheel/netpyne/cell copying build/lib/netpyne/cell/NML2SpikeSource.py -> build/bdist.linux-x86_64/wheel/netpyne/cell copying build/lib/netpyne/cell/NML2Cell.py -> build/bdist.linux-x86_64/wheel/netpyne/cell creating build/bdist.linux-x86_64/wheel/netpyne/conversion copying build/lib/netpyne/conversion/pythonScript.py -> build/bdist.linux-x86_64/wheel/netpyne/conversion copying build/lib/netpyne/conversion/neuronPyHoc.py -> build/bdist.linux-x86_64/wheel/netpyne/conversion copying build/lib/netpyne/conversion/neuromlFormat.py -> build/bdist.linux-x86_64/wheel/netpyne/conversion copying build/lib/netpyne/conversion/excel.py -> build/bdist.linux-x86_64/wheel/netpyne/conversion copying build/lib/netpyne/conversion/__init__.py -> build/bdist.linux-x86_64/wheel/netpyne/conversion copying build/lib/netpyne/conversion/sonataImport.py -> build/bdist.linux-x86_64/wheel/netpyne/conversion creating build/bdist.linux-x86_64/wheel/netpyne/metadata copying build/lib/netpyne/metadata/metadata.py -> build/bdist.linux-x86_64/wheel/netpyne/metadata copying build/lib/netpyne/metadata/api.py -> build/bdist.linux-x86_64/wheel/netpyne/metadata copying build/lib/netpyne/metadata/__init__.py -> build/bdist.linux-x86_64/wheel/netpyne/metadata creating build/bdist.linux-x86_64/wheel/netpyne/network copying build/lib/netpyne/network/subconn.py -> build/bdist.linux-x86_64/wheel/netpyne/network copying build/lib/netpyne/network/stim.py -> build/bdist.linux-x86_64/wheel/netpyne/network copying build/lib/netpyne/network/shape.py -> build/bdist.linux-x86_64/wheel/netpyne/network copying build/lib/netpyne/network/pop.py -> build/bdist.linux-x86_64/wheel/netpyne/network copying build/lib/netpyne/network/network.py -> build/bdist.linux-x86_64/wheel/netpyne/network copying build/lib/netpyne/network/netrxd.py -> build/bdist.linux-x86_64/wheel/netpyne/network copying build/lib/netpyne/network/modify.py -> build/bdist.linux-x86_64/wheel/netpyne/network copying build/lib/netpyne/network/conn.py -> build/bdist.linux-x86_64/wheel/netpyne/network copying build/lib/netpyne/network/__init__.py -> build/bdist.linux-x86_64/wheel/netpyne/network creating build/bdist.linux-x86_64/wheel/netpyne/plotting copying build/lib/netpyne/plotting/plotShape.py -> build/bdist.linux-x86_64/wheel/netpyne/plotting copying build/lib/netpyne/plotting/__init__.py -> build/bdist.linux-x86_64/wheel/netpyne/plotting copying build/lib/netpyne/plotting/plotter.py -> build/bdist.linux-x86_64/wheel/netpyne/plotting copying build/lib/netpyne/plotting/plotTimeSeriesPSD.py -> build/bdist.linux-x86_64/wheel/netpyne/plotting copying build/lib/netpyne/plotting/plotTimeSeries.py -> build/bdist.linux-x86_64/wheel/netpyne/plotting copying build/lib/netpyne/plotting/plotSpikeHist.py -> build/bdist.linux-x86_64/wheel/netpyne/plotting copying build/lib/netpyne/plotting/plotSpikeFreq.py -> build/bdist.linux-x86_64/wheel/netpyne/plotting copying build/lib/netpyne/plotting/plotRaster.py -> build/bdist.linux-x86_64/wheel/netpyne/plotting copying build/lib/netpyne/plotting/plotLFPSpectrogram.py -> build/bdist.linux-x86_64/wheel/netpyne/plotting copying build/lib/netpyne/plotting/plotLFPLocations.py -> build/bdist.linux-x86_64/wheel/netpyne/plotting copying build/lib/netpyne/plotting/plotCSD.py -> build/bdist.linux-x86_64/wheel/netpyne/plotting creating build/bdist.linux-x86_64/wheel/netpyne/sim copying build/lib/netpyne/sim/wrappers.py -> build/bdist.linux-x86_64/wheel/netpyne/sim copying build/lib/netpyne/sim/utils.py -> build/bdist.linux-x86_64/wheel/netpyne/sim copying build/lib/netpyne/sim/setup.py -> build/bdist.linux-x86_64/wheel/netpyne/sim copying build/lib/netpyne/sim/save.py -> build/bdist.linux-x86_64/wheel/netpyne/sim copying build/lib/netpyne/sim/run.py -> build/bdist.linux-x86_64/wheel/netpyne/sim copying build/lib/netpyne/sim/load.py -> build/bdist.linux-x86_64/wheel/netpyne/sim copying build/lib/netpyne/sim/gather.py -> build/bdist.linux-x86_64/wheel/netpyne/sim copying build/lib/netpyne/sim/__init__.py -> build/bdist.linux-x86_64/wheel/netpyne/sim copying build/lib/netpyne/sim/validator.py -> build/bdist.linux-x86_64/wheel/netpyne/sim creating build/bdist.linux-x86_64/wheel/netpyne/specs copying build/lib/netpyne/specs/utils.py -> build/bdist.linux-x86_64/wheel/netpyne/specs copying build/lib/netpyne/specs/simConfig.py -> build/bdist.linux-x86_64/wheel/netpyne/specs copying build/lib/netpyne/specs/netParams.py -> build/bdist.linux-x86_64/wheel/netpyne/specs copying build/lib/netpyne/specs/dicts.py -> build/bdist.linux-x86_64/wheel/netpyne/specs copying build/lib/netpyne/specs/__init__.py -> build/bdist.linux-x86_64/wheel/netpyne/specs creating build/bdist.linux-x86_64/wheel/netpyne/support copying build/lib/netpyne/support/stackedBarGraph.py -> build/bdist.linux-x86_64/wheel/netpyne/support copying build/lib/netpyne/support/scalebar.py -> build/bdist.linux-x86_64/wheel/netpyne/support copying build/lib/netpyne/support/recxelectrode.py -> build/bdist.linux-x86_64/wheel/netpyne/support copying build/lib/netpyne/support/morphology.py -> build/bdist.linux-x86_64/wheel/netpyne/support copying build/lib/netpyne/support/morlet.py -> build/bdist.linux-x86_64/wheel/netpyne/support copying build/lib/netpyne/support/filter.py -> build/bdist.linux-x86_64/wheel/netpyne/support copying build/lib/netpyne/support/bsmart.py -> build/bdist.linux-x86_64/wheel/netpyne/support copying build/lib/netpyne/support/__init__.py -> build/bdist.linux-x86_64/wheel/netpyne/support copying build/lib/netpyne/support/nml_reader.py -> build/bdist.linux-x86_64/wheel/netpyne/support creating build/bdist.linux-x86_64/wheel/netpyne/tests copying build/lib/netpyne/tests/validate_tests.py -> build/bdist.linux-x86_64/wheel/netpyne/tests copying build/lib/netpyne/tests/tests.py -> build/bdist.linux-x86_64/wheel/netpyne/tests copying build/lib/netpyne/tests/checks.py -> build/bdist.linux-x86_64/wheel/netpyne/tests copying build/lib/netpyne/tests/__init__.py -> build/bdist.linux-x86_64/wheel/netpyne/tests copying build/lib/netpyne/__init__.py -> build/bdist.linux-x86_64/wheel/netpyne running install_egg_info running egg_info writing netpyne.egg-info/PKG-INFO writing dependency_links to netpyne.egg-info/dependency_links.txt writing requirements to netpyne.egg-info/requires.txt writing top-level names to netpyne.egg-info/top_level.txt reading manifest file 'netpyne.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 2: 'recursive-exclude' expects ... warning: no previously-included files matching '*' found under directory 'examples' warning: no previously-included files matching 'x86_64' found anywhere in distribution warning: no previously-included files matching 'x86_64/*' found anywhere in distribution warning: no previously-included files matching '.libs*' found anywhere in distribution warning: no previously-included files matching '.libs/*' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'netpyne.egg-info/SOURCES.txt' Copying netpyne.egg-info to build/bdist.linux-x86_64/wheel/netpyne-1.0.6-py3.12.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/netpyne-1.0.6.dist-info/WHEEL creating '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir/pip-wheel-zh_vs97h/.tmp-hh5gqghm/netpyne-1.0.6-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'netpyne/__init__.py' adding 'netpyne/analysis/__init__.py' adding 'netpyne/analysis/csd.py' adding 'netpyne/analysis/dipole.py' adding 'netpyne/analysis/filter.py' adding 'netpyne/analysis/info.py' adding 'netpyne/analysis/interactive.py' adding 'netpyne/analysis/lfp.py' adding 'netpyne/analysis/lfp_orig.py' adding 'netpyne/analysis/mapping.py' adding 'netpyne/analysis/network.py' adding 'netpyne/analysis/rxd.py' adding 'netpyne/analysis/spikes.py' adding 'netpyne/analysis/spikes_legacy.py' adding 'netpyne/analysis/tools.py' adding 'netpyne/analysis/traces.py' adding 'netpyne/analysis/utils.py' adding 'netpyne/analysis/wrapper.py' adding 'netpyne/batch/__init__.py' adding 'netpyne/batch/asd_parallel.py' adding 'netpyne/batch/batch.py' adding 'netpyne/batch/evol.py' adding 'netpyne/batch/grid.py' adding 'netpyne/batch/optuna_parallel.py' adding 'netpyne/batch/sbi_parallel.py' adding 'netpyne/batch/utils.py' adding 'netpyne/cell/NML2Cell.py' adding 'netpyne/cell/NML2SpikeSource.py' adding 'netpyne/cell/__init__.py' adding 'netpyne/cell/cell.py' adding 'netpyne/cell/compartCell.py' adding 'netpyne/cell/inputs.py' adding 'netpyne/cell/pointCell.py' adding 'netpyne/conversion/__init__.py' adding 'netpyne/conversion/excel.py' adding 'netpyne/conversion/neuromlFormat.py' adding 'netpyne/conversion/neuronPyHoc.py' adding 'netpyne/conversion/pythonScript.py' adding 'netpyne/conversion/sonataImport.py' adding 'netpyne/metadata/__init__.py' adding 'netpyne/metadata/api.py' adding 'netpyne/metadata/metadata.py' adding 'netpyne/network/__init__.py' adding 'netpyne/network/conn.py' adding 'netpyne/network/modify.py' adding 'netpyne/network/netrxd.py' adding 'netpyne/network/network.py' adding 'netpyne/network/pop.py' adding 'netpyne/network/shape.py' adding 'netpyne/network/stim.py' adding 'netpyne/network/subconn.py' adding 'netpyne/plotting/__init__.py' adding 'netpyne/plotting/plotCSD.py' adding 'netpyne/plotting/plotLFPLocations.py' adding 'netpyne/plotting/plotLFPSpectrogram.py' adding 'netpyne/plotting/plotRaster.py' adding 'netpyne/plotting/plotShape.py' adding 'netpyne/plotting/plotSpikeFreq.py' adding 'netpyne/plotting/plotSpikeHist.py' adding 'netpyne/plotting/plotTimeSeries.py' adding 'netpyne/plotting/plotTimeSeriesPSD.py' adding 'netpyne/plotting/plotter.py' adding 'netpyne/sim/__init__.py' adding 'netpyne/sim/gather.py' adding 'netpyne/sim/load.py' adding 'netpyne/sim/run.py' adding 'netpyne/sim/save.py' adding 'netpyne/sim/setup.py' adding 'netpyne/sim/utils.py' adding 'netpyne/sim/validator.py' adding 'netpyne/sim/wrappers.py' adding 'netpyne/specs/__init__.py' adding 'netpyne/specs/dicts.py' adding 'netpyne/specs/netParams.py' adding 'netpyne/specs/simConfig.py' adding 'netpyne/specs/utils.py' adding 'netpyne/support/__init__.py' adding 'netpyne/support/bsmart.py' adding 'netpyne/support/filter.py' adding 'netpyne/support/morlet.py' adding 'netpyne/support/morphology.py' adding 'netpyne/support/nml_reader.py' adding 'netpyne/support/recxelectrode.py' adding 'netpyne/support/scalebar.py' adding 'netpyne/support/stackedBarGraph.py' adding 'netpyne/tests/__init__.py' adding 'netpyne/tests/checks.py' adding 'netpyne/tests/tests.py' adding 'netpyne/tests/validate_tests.py' adding 'netpyne-1.0.6.dist-info/LICENSE' adding 'netpyne-1.0.6.dist-info/METADATA' adding 'netpyne-1.0.6.dist-info/WHEEL' adding 'netpyne-1.0.6.dist-info/top_level.txt' adding 'netpyne-1.0.6.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for netpyne (pyproject.toml): finished with status 'done' Created wheel for netpyne: filename=netpyne-1.0.6-py3-none-any.whl size=403022 sha256=5e1c2d607d68b5dc2230c708bb71547585dec3f19be2b33bad6ec4ebdfe9dfe4 Stored in directory: /builddir/.cache/pip/wheels/66/2d/bb/68be0b619a2fa761510f56e45995092d1a5b9dbbea9d71d14e Successfully built netpyne + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.WxBbYM + umask 022 + cd /builddir/build/BUILD/python-netpyne-1.0.6-build + '[' /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT ++ dirname /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT + mkdir -p /builddir/build/BUILD/python-netpyne-1.0.6-build + mkdir /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd netpyne-1.0.6 ++ ls /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/pyproject-wheeldir/netpyne-1.0.6-py3-none-any.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=netpyne==1.0.6 + '[' -z netpyne==1.0.6 ']' + TMPDIR=/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/pyproject-wheeldir netpyne==1.0.6 Using pip 24.0 from /usr/lib/python3.12/site-packages/pip (python 3.12) Looking in links: /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/pyproject-wheeldir Processing ./pyproject-wheeldir/netpyne-1.0.6-py3-none-any.whl Installing collected packages: netpyne Successfully installed netpyne-1.0.6 + '[' -d /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/bin ']' + rm -f /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages ']' + site_dirs+=("/usr/lib/python3.12/site-packages") + '[' /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib64/python3.12/site-packages '!=' /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages ']' + '[' -d /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib64/python3.12/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.12/site-packages/netpyne-1.0.6.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne-1.0.6.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT --record /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne-1.0.6.dist-info/RECORD --output /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-record + rm -fv /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne-1.0.6.dist-info/RECORD removed '/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne-1.0.6.dist-info/RECORD' + rm -fv /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne-1.0.6.dist-info/REQUESTED removed '/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne-1.0.6.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_PERCENTAGES_COUNT=2 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-modules --buildroot /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT --sitelib /usr/lib/python3.12/site-packages --sitearch /usr/lib64/python3.12/site-packages --python-version 3.12 --pyproject-record /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-record --prefix /usr -l netpyne + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12 using python3.12 /usr/lib/python3.12/site-packages/netpyne/analysis/dipole.py:127: SyntaxWarning: invalid escape sequence '\c' /usr/lib/python3.12/site-packages/netpyne/analysis/dipole.py:127: SyntaxWarning: invalid escape sequence '\c' /usr/lib/python3.12/site-packages/netpyne/analysis/lfp_orig.py:342: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.12/site-packages/netpyne/analysis/lfp_orig.py:353: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.12/site-packages/netpyne/analysis/lfp_orig.py:373: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.12/site-packages/netpyne/analysis/lfp_orig.py:342: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.12/site-packages/netpyne/analysis/lfp_orig.py:353: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.12/site-packages/netpyne/analysis/lfp_orig.py:373: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.12/site-packages/netpyne/analysis/spikes_legacy.py:586: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib/python3.12/site-packages/netpyne/analysis/spikes_legacy.py:586: SyntaxWarning: "is" with 'str' literal. Did you mean "=="? /usr/lib/python3.12/site-packages/netpyne/network/netrxd.py:669: SyntaxWarning: invalid escape sequence '\w' /usr/lib/python3.12/site-packages/netpyne/network/netrxd.py:669: SyntaxWarning: invalid escape sequence '\w' /usr/lib/python3.12/site-packages/netpyne/network/netrxd.py:669: SyntaxWarning: invalid escape sequence '\w' /usr/lib/python3.12/site-packages/netpyne/network/netrxd.py:669: SyntaxWarning: invalid escape sequence '\w' /usr/lib/python3.12/site-packages/netpyne/plotting/plotTimeSeries.py:592: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.12/site-packages/netpyne/plotting/plotTimeSeries.py:592: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.12/site-packages/netpyne/support/stackedBarGraph.py:189: SyntaxWarning: "is not" with 'str' literal. Did you mean "!="? /usr/lib/python3.12/site-packages/netpyne/support/stackedBarGraph.py:189: SyntaxWarning: "is not" with 'str' literal. Did you mean "!="? + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT Cannot initialize handler pyc: ModuleNotFoundError: No module named 'marshalparser' [src/multiprocess.rs:66:9] &cmd = Command { program: "/usr/bin/add-determinism", args: [ "/usr/bin/add-determinism", "--socket", "3", "--brp", "--handler", "ar,jar,javadoc", ], env: CommandEnv { clear: false, vars: { "SOURCE_DATE_EPOCH": Some( "1717113600", ), }, }, create_pidfd: false, } Bye! Bye! Bye! Bye! Reading /builddir/build/BUILD/python-netpyne-1.0.6-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.hi6I2A + umask 022 + cd /builddir/build/BUILD/python-netpyne-1.0.6-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd netpyne-1.0.6 + '[' '!' -f /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-modules ']' + PATH=/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib64/python3.12/site-packages:/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages + _PYTHONSITE=/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib64/python3.12/site-packages:/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/python-netpyne-1.0.6-build/python-netpyne-1.0.6-4.fc41.x86_64-pyproject-modules -e '*optuna*' -e '*sbi*' Check import: netpyne Warning: no DISPLAY environment variable. --No graphics will be displayed. Check import: netpyne.analysis Check import: netpyne.analysis.csd Check import: netpyne.analysis.dipole Check import: netpyne.analysis.filter Check import: netpyne.analysis.info Check import: netpyne.analysis.interactive Check import: netpyne.analysis.lfp Check import: netpyne.analysis.lfp_orig Check import: netpyne.analysis.mapping Check import: netpyne.analysis.network Check import: netpyne.analysis.rxd Check import: netpyne.analysis.spikes Check import: netpyne.analysis.spikes_legacy Check import: netpyne.analysis.tools Check import: netpyne.analysis.traces Check import: netpyne.analysis.utils Check import: netpyne.analysis.wrapper Check import: netpyne.batch Check import: netpyne.batch.asd_parallel Check import: netpyne.batch.batch Check import: netpyne.batch.evol Check import: netpyne.batch.grid Check import: netpyne.batch.utils Check import: netpyne.cell Check import: netpyne.cell.NML2Cell Check import: netpyne.cell.NML2SpikeSource Check import: netpyne.cell.cell Check import: netpyne.cell.compartCell Check import: netpyne.cell.inputs Check import: netpyne.cell.pointCell Check import: netpyne.conversion Check import: netpyne.conversion.excel Check import: netpyne.conversion.neuromlFormat Check import: netpyne.conversion.neuronPyHoc Check import: netpyne.conversion.pythonScript Check import: netpyne.conversion.sonataImport Check import: netpyne.metadata Check import: netpyne.metadata.api Check import: netpyne.metadata.metadata Check import: netpyne.network Check import: netpyne.network.conn Check import: netpyne.network.modify Check import: netpyne.network.netrxd Check import: netpyne.network.network Check import: netpyne.network.pop Check import: netpyne.network.shape Check import: netpyne.network.stim Check import: netpyne.network.subconn Check import: netpyne.plotting Check import: netpyne.plotting.plotCSD Check import: netpyne.plotting.plotLFPLocations Check import: netpyne.plotting.plotLFPSpectrogram Check import: netpyne.plotting.plotRaster Check import: netpyne.plotting.plotShape Check import: netpyne.plotting.plotSpikeFreq Check import: netpyne.plotting.plotSpikeHist Check import: netpyne.plotting.plotTimeSeries Check import: netpyne.plotting.plotTimeSeriesPSD Check import: netpyne.plotting.plotter Check import: netpyne.sim Check import: netpyne.sim.gather Check import: netpyne.sim.load Check import: netpyne.sim.run Check import: netpyne.sim.save Check import: netpyne.sim.setup Check import: netpyne.sim.utils Check import: netpyne.sim.validator Check import: netpyne.sim.wrappers Check import: netpyne.specs Check import: netpyne.specs.dicts Check import: netpyne.specs.netParams Check import: netpyne.specs.simConfig Check import: netpyne.specs.utils Check import: netpyne.support Check import: netpyne.support.bsmart Check import: netpyne.support.filter Check import: netpyne.support.morlet Check import: netpyne.support.morphology Check import: netpyne.support.nml_reader Check import: netpyne.support.recxelectrode Check import: netpyne.support.scalebar Check import: netpyne.support.stackedBarGraph Check import: netpyne.tests Check import: netpyne.tests.checks Check import: netpyne.tests.tests Check import: netpyne.tests.validate_tests Note: SONATA import failed; import/export functions for SONATA will not be available. To use this feature install these Python packages: ['tables', 'pyneuroml', 'neuroml'] ERROR: popParams->'cellModel': No cellModel specified in population parameters..Values provided are: {'cellType': 'PYR', 'numCells': 50} + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' PATH=/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin PYTHONPATH=/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib64/python3.12/site-packages:/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages PYTHONDONTWRITEBYTECODE=1 'PYTEST_ADDOPTS= --ignore=/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir' PYTEST_XDIST_AUTO_NUM_WORKERS=4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib64/python3.12/site-packages:/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + pushd doc/source/code ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 + nrnivmodl mod /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code Mod files: "mod/mod/A.mod" "mod/mod/AMPA.mod" "mod/mod/ElectSyn.mod" "mod/mod/GABAa.mod" "mod/mod/GradedSyn.mod" "mod/mod/MyExp2SynBB.mod" "mod/mod/MyExp2SynNMDABB.mod" "mod/mod/NMDA.mod" "mod/mod/Nca.mod" "mod/mod/OFThpo.mod" "mod/mod/OFThresh.mod" "mod/mod/ar.mod" "mod/mod/cad.mod" "mod/mod/cadad.mod" "mod/mod/cal.mod" "mod/mod/cat.mod" "mod/mod/expsynstdp.mod" "mod/mod/iholmw.mod" "mod/mod/izhi2003a.mod" "mod/mod/izhi2003b.mod" "mod/mod/izhi2007a.mod" "mod/mod/izhi2007b.mod" "mod/mod/k2.mod" "mod/mod/ka.mod" "mod/mod/kacurrent.mod" "mod/mod/kahp.mod" "mod/mod/kc.mod" "mod/mod/kca.mod" "mod/mod/kdr.mod" "mod/mod/kdrcurrent.mod" "mod/mod/km.mod" "mod/mod/km2.mod" "mod/mod/kv.mod" "mod/mod/nacurrent.mod" "mod/mod/naf.mod" "mod/mod/nap.mod" "mod/mod/naz.mod" "mod/mod/vecevent.mod" Creating 'x86_64' directory for .o files. -> Compiling mod_func.cpp -> NMODL ../mod/A.mod -> NMODL ../mod/AMPA.mod -> NMODL ../mod/ElectSyn.mod Translating A.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/A.c Translating AMPA.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/AMPA.c INCLUDEing ../netcon.inc INCLUDEing ofc.inc Translating ElectSyn.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/ElectSyn.c Thread Safe Thread Safe Thread Safe -> NMODL ../mod/GradedSyn.mod -> NMODL ../mod/GABAa.mod -> NMODL ../mod/MyExp2SynBB.mod Translating GABAa.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/GABAa.c Translating MyExp2SynBB.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/MyExp2SynBB.c INCLUDEing ../netcon.inc Thread Safe Translating GradedSyn.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/GradedSyn.c Thread Safe -> NMODL ../mod/MyExp2SynNMDABB.mod Thread Safe -> NMODL ../mod/NMDA.mod -> NMODL ../mod/Nca.mod Translating MyExp2SynNMDABB.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/MyExp2SynNMDABB.c Translating NMDA.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/NMDA.c INCLUDEing ../netcon.inc Translating Nca.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/Nca.c Thread Safe Notice: Assignment to the GLOBAL variable, "tadj", is not thread safe Thread Safe -> NMODL ../mod/OFThpo.mod -> NMODL ../mod/OFThresh.mod -> NMODL ../mod/ar.mod Translating OFThpo.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/OFThpo.c Translating ar.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/ar.c Thread Safe Translating OFThresh.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/OFThresh.c Thread Safe -> NMODL ../mod/cad.mod -> NMODL ../mod/cadad.mod Thread Safe -> NMODL ../mod/cal.mod Translating cad.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/cad.c Translating cadad.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/cadad.c Thread Safe Thread Safe -> NMODL ../mod/cat.mod Translating cal.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/cal.c Thread Safe -> NMODL ../mod/expsynstdp.mod -> NMODL ../mod/iholmw.mod Translating cat.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/cat.c Thread Safe Translating expsynstdp.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/expsynstdp.c Thread Safe -> NMODL ../mod/izhi2003a.mod Translating iholmw.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/iholmw.c INCLUDEing aux_fun.inc -> NMODL ../mod/izhi2003b.mod Thread Safe -> NMODL ../mod/izhi2007a.mod Translating izhi2003a.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/izhi2003a.c Translating izhi2003b.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/izhi2003b.c Thread Safe -> NMODL ../mod/izhi2007b.mod Thread Safe -> NMODL ../mod/k2.mod Translating izhi2007a.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/izhi2007a.c -> NMODL ../mod/ka.mod Translating izhi2007b.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/izhi2007b.c Notice: VERBATIM blocks are not thread safe Translating k2.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/k2.c Notice: VERBATIM blocks are not thread safe Translating ka.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/ka.c Thread Safe Thread Safe -> NMODL ../mod/kacurrent.mod -> NMODL ../mod/kahp.mod -> NMODL ../mod/kc.mod -> NMODL ../mod/kca.mod Translating kacurrent.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/kacurrent.c Translating kc.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/kc.c Translating kahp.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/kahp.c Thread Safe Thread Safe Translating kca.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/kca.c Thread Safe -> NMODL ../mod/kdr.mod Notice: Assignment to the GLOBAL variable, "tadj", is not thread safe -> NMODL ../mod/kdrcurrent.mod -> NMODL ../mod/km.mod -> NMODL ../mod/km2.mod Translating kdr.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/kdr.c Translating kdrcurrent.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/kdrcurrent.c Thread Safe Thread Safe Translating km2.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/km2.c -> NMODL ../mod/kv.mod Translating km.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/km.c -> NMODL ../mod/nacurrent.mod Thread Safe Thread Safe -> NMODL ../mod/naf.mod Translating nacurrent.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/nacurrent.c Translating kv.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/kv.c -> NMODL ../mod/nap.mod Notice: Assignment to the GLOBAL variable, "ntau", is not thread safe Thread Safe Notice: Assignment to the GLOBAL variable, "ninf", is not thread safe Notice: Assignment to the GLOBAL variable, "tadj", is not thread safe Translating naf.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/naf.c -> NMODL ../mod/naz.mod -> NMODL ../mod/vecevent.mod Thread Safe Translating nap.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/nap.c -> Compiling A.c Translating naz.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/naz.c Translating vecevent.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/doc/source/code/x86_64/vecevent.c Thread Safe Thread Safe Notice: ARTIFICIAL_CELL is a synonym for POINT_PROCESS which hints that it only affects and is affected by discrete events. As such it is not located in a section and is not associated with an integrator Notice: Assignment to the GLOBAL variable, "htau", is not thread safe Notice: Assignment to the GLOBAL variable, "hinf", is not thread safe Notice: Assignment to the GLOBAL variable, "mtau", is not thread safe Notice: Assignment to the GLOBAL variable, "minf", is not thread safe Notice: Assignment to the GLOBAL variable, "tadj", is not thread safe -> Compiling AMPA.c -> Compiling ElectSyn.c -> Compiling GABAa.c -> Compiling GradedSyn.c -> Compiling MyExp2SynBB.c -> Compiling MyExp2SynNMDABB.c -> Compiling NMDA.c -> Compiling Nca.c -> Compiling OFThpo.c -> Compiling OFThresh.c -> Compiling ar.c -> Compiling cad.c -> Compiling cadad.c -> Compiling cal.c -> Compiling cat.c -> Compiling expsynstdp.c -> Compiling iholmw.c -> Compiling izhi2003a.c -> Compiling izhi2003b.c -> Compiling izhi2007a.c -> Compiling izhi2007b.c -> Compiling k2.c -> Compiling ka.c -> Compiling kacurrent.c -> Compiling kahp.c -> Compiling kc.c -> Compiling kca.c -> Compiling kdr.c -> Compiling kdrcurrent.c -> Compiling km.c -> Compiling km2.c -> Compiling kv.c -> Compiling nacurrent.c -> Compiling naf.c -> Compiling nap.c -> Compiling naz.c -> Compiling vecevent.c => LINKING shared library ./libnrnmech.so => LINKING executable ./special LDFLAGS are: -lreadline -lcurses -lform -lpython3.12 -lX11 -lXext Successfully created x86_64/special + /usr/bin/python3 tut2.py --nogui Warning: no DISPLAY environment variable. --No graphics will be displayed. Start time: 2024-05-31 20:43:06.377224 Creating network of 2 cell populations on 1 hosts... Number of cells on node 0: 40 Done; cell creation time = 0.00 s. Making connections... Number of connections on node 0: 240 Done; cell connection time = 0.01 s. Adding stims... Number of stims on node 0: 40 Done; cell stims creation time = 0.00 s. Recording 1 traces of 1 types on node 0 Running simulation using NEURON for 1000.0 ms... Done; run time = 0.51 s; real-time ratio: 1.98. Gathering data... Done; gather time = 0.01 s. Analyzing... Cells: 40 Connections: 280 (7.00 per cell) Spikes: 931 (23.27 Hz) Simulated time: 1.0 s; 1 workers Run time: 0.51 s Saving output as tut2_data.json ... Finished saving! Done; saving time = 0.02 s. Preparing spike data... Plotting raster... Plotting recorded cell traces ... cell Plotting 2D representation of network cell locations and connections... Done; plotting time = 0.39 s Total time = 0.94 s + /usr/bin/python3 tut3.py --nogui Warning: no DISPLAY environment variable. --No graphics will be displayed. Start time: 2024-05-31 20:43:08.341405 Creating network of 2 cell populations on 1 hosts... Number of cells on node 0: 40 Done; cell creation time = 0.00 s. Making connections... Number of connections on node 0: 203 Done; cell connection time = 0.01 s. Adding stims... Number of stims on node 0: 40 Done; cell stims creation time = 0.00 s. Recording 1 traces of 1 types on node 0 Running simulation using NEURON for 1000.0 ms... Done; run time = 0.35 s; real-time ratio: 2.85. Gathering data... Done; gather time = 0.01 s. Analyzing... Cells: 40 Connections: 243 (6.08 per cell) Spikes: 560 (14.00 Hz) Simulated time: 1.0 s; 1 workers Run time: 0.35 s Warning: data won't be saved. No output format specified (consider sim.cfg.savePickle, sim.cfg.saveJson etc.) Preparing spike data... Plotting raster... Plotting recorded cell traces ... cell Plotting 2D representation of network cell locations and connections... Done; plotting time = 0.38 s Total time = 0.76 s + /usr/bin/python3 tut4.py --nogui Warning: no DISPLAY environment variable. --No graphics will be displayed. Start time: 2024-05-31 20:43:10.099314 Creating network of 2 cell populations on 1 hosts... Number of cells on node 0: 40 Done; cell creation time = 0.00 s. Making connections... Number of connections on node 0: 33 Done; cell connection time = 0.00 s. Adding stims... Number of stims on node 0: 40 Done; cell stims creation time = 0.00 s. Recording 1 traces of 1 types on node 0 Running simulation using NEURON for 1000.0 ms... Done; run time = 0.21 s; real-time ratio: 4.83. Gathering data... Done; gather time = 0.00 s. Analyzing... Cells: 40 Connections: 73 (1.82 per cell) Spikes: 1186 (29.65 Hz) Simulated time: 1.0 s; 1 workers Run time: 0.21 s Warning: data won't be saved. No output format specified (consider sim.cfg.savePickle, sim.cfg.saveJson etc.) Preparing spike data... Plotting raster... Plotting recorded cell traces ... cell Plotting 2D representation of network cell locations and connections... Done; plotting time = 0.29 s Total time = 0.51 s + /usr/bin/python3 tut5.py --nogui Warning: no DISPLAY environment variable. --No graphics will be displayed. Start time: 2024-05-31 20:43:11.749985 Creating network of 6 cell populations on 1 hosts... Number of cells on node 0: 300 Done; cell creation time = 0.02 s. Making connections... Number of connections on node 0: 6796 Done; cell connection time = 0.61 s. Adding stims... Number of stims on node 0: 300 Done; cell stims creation time = 0.02 s. Recording 0 traces of 0 types on node 0 Running simulation using NEURON for 1000.0 ms... Done; run time = 6.25 s; real-time ratio: 0.16. Gathering data... Done; gather time = 0.11 s. Analyzing... Cells: 300 Connections: 7096 (23.65 per cell) Spikes: 4808 (16.03 Hz) Simulated time: 1.0 s; 1 workers Run time: 6.25 s Warning: data won't be saved. No output format specified (consider sim.cfg.savePickle, sim.cfg.saveJson etc.) Preparing spike data... Plotting raster... Done; plotting time = 0.22 s Total time = 7.22 s + /usr/bin/python3 tut6.py --nogui Warning: no DISPLAY environment variable. --No graphics will be displayed. Start time: 2024-05-31 20:43:20.015572 Creating network of 2 cell populations on 1 hosts... Number of cells on node 0: 40 Done; cell creation time = 0.00 s. Making connections... Number of connections on node 0: 0 Done; cell connection time = 0.00 s. Adding stims... Number of stims on node 0: 48 Done; cell stims creation time = 0.00 s. Recording 2 traces of 1 types on node 0 Running simulation using NEURON for 1000.0 ms... Done; run time = 0.20 s; real-time ratio: 4.92. Gathering data... Done; gather time = 0.00 s. Analyzing... Cells: 40 Connections: 16 (0.40 per cell) Spikes: 134 (3.35 Hz) Simulated time: 1.0 s; 1 workers Run time: 0.20 s Warning: data won't be saved. No output format specified (consider sim.cfg.savePickle, sim.cfg.saveJson etc.) Preparing spike data... Plotting raster... Plotting recorded cell traces ... cell Done; plotting time = 0.22 s Total time = 0.44 s + /usr/bin/python3 tut7.py --nogui Warning: no DISPLAY environment variable. --No graphics will be displayed. Traceback (most recent call last): File "/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne/analysis/utils.py", line 75, in wrapper return function(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne/plotting/plotRaster.py", line 395, in plotRaster rasterPlotter.axis.vlines(spkTimes, 0, len(cellInds), 'red', linewidth=0.1) ^^^^^^^^ NameError: name 'cellInds' is not defined Traceback (most recent call last): File "/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne/analysis/utils.py", line 75, in wrapper return function(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne/plotting/plotRaster.py", line 395, in plotRaster rasterPlotter.axis.vlines(spkTimes, 0, len(cellInds), 'red', linewidth=0.1) ^^^^^^^^ NameError: name 'cellInds' is not defined Traceback (most recent call last): File "/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne/analysis/utils.py", line 75, in wrapper return function(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne/plotting/plotRaster.py", line 395, in plotRaster rasterPlotter.axis.vlines(spkTimes, 0, len(cellInds), 'red', linewidth=0.1) ^^^^^^^^ NameError: name 'cellInds' is not defined Start time: 2024-05-31 20:43:21.449908 Creating network of 1 cell populations on 1 hosts... Number of cells on node 0: 50 Done; cell creation time = 0.00 s. Making connections... Number of connections on node 0: 2450 Done; cell connection time = 0.12 s. Adding stims... Number of stims on node 0: 50 Done; cell stims creation time = 0.00 s. Recording 1 traces of 1 types on node 0 Running simulation using NEURON for 500.0 ms... Done; run time = 0.93 s; real-time ratio: 0.54. Gathering data... Done; gather time = 0.04 s. Analyzing... Cells: 50 Connections: 2500 (50.00 per cell) Spikes: 1261 (50.44 Hz) Simulated time: 0.5 s; 1 workers Run time: 0.93 s Warning: data won't be saved. No output format specified (consider sim.cfg.savePickle, sim.cfg.saveJson etc.) Preparing spike data... Plotting raster... There was an exception in plotRaster() Plotting recorded cell traces ... cell Plotting 2D representation of network cell locations and connections... Done; plotting time = 1.10 s Total time = 2.19 s Modfying connection parameters... Done; connections modification time = 0.00 s. Running simulation using NEURON for 500.0 ms... Done; run time = 1.24 s; real-time ratio: 0.40. Gathering data... Done; gather time = 0.04 s. Analyzing... Cells: 50 Connections: 2500 (50.00 per cell) Spikes: 583 (23.32 Hz) Simulated time: 0.5 s; 1 workers Run time: 1.24 s Warning: data won't be saved. No output format specified (consider sim.cfg.savePickle, sim.cfg.saveJson etc.) Preparing spike data... Plotting raster... There was an exception in plotRaster() Plotting recorded cell traces ... cell Plotting 2D representation of network cell locations and connections... Done; plotting time = 1.22 s Modfying cell parameters... Done; cells modification time = 0.00 s. Running simulation using NEURON for 500.0 ms... Done; run time = 1.32 s; real-time ratio: 0.38. Gathering data... Done; gather time = 0.04 s. Analyzing... Cells: 50 Connections: 2500 (50.00 per cell) Spikes: 332 (13.28 Hz) Simulated time: 0.5 s; 1 workers Run time: 1.32 s Preparing spike data... Plotting raster... There was an exception in plotRaster() Plotting recorded cell traces ... cell + popd + pushd examples/HHTut/src ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/HHTut/src ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 + /usr/bin/python3 init.py -nogui Warning: no DISPLAY environment variable. --No graphics will be displayed. -nogui passed, matplotlib is unavailable -nogui passed, matplotlib is unavailable Loading model from /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/HHTut/src/index.npjson ... Traceback (most recent call last): File "/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/HHTut/src/init.py", line 3, in cfg, netParams = sim.loadFromIndexFile('index.npjson') ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne/sim/load.py", line 471, in loadFromIndexFile return loadModel(index, loadMechs=False) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne/sim/load.py", line 494, in loadModel with open(index, 'r') as fileObj: ^^^^^^^^^^^^^^^^ FileNotFoundError: [Errno 2] No such file or directory: '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/HHTut/src/index.npjson' + true + popd ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/HybridTut/src ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 + pushd examples/HybridTut/src/ + nrnivmodl ../mod/ /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/HybridTut/src Mod files: "../mod/../mod//izhi2007b.mod" Creating 'x86_64' directory for .o files. -> Compiling mod_func.cpp -> NMODL ../../mod//izhi2007b.mod Translating izhi2007b.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/HybridTut/src/x86_64/izhi2007b.c Notice: VERBATIM blocks are not thread safe -> Compiling izhi2007b.c => LINKING shared library ./libnrnmech.so => LINKING executable ./special LDFLAGS are: -lreadline -lcurses -lform -lpython3.12 -lX11 -lXext Successfully created x86_64/special + /usr/bin/python3 init.py -nogui Warning: no DISPLAY environment variable. --No graphics will be displayed. -nogui passed, matplotlib is unavailable -nogui passed, matplotlib is unavailable Loading model from /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/HybridTut/src/index.npjson ... Traceback (most recent call last): File "/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/HybridTut/src/init.py", line 3, in cfg, netParams = sim.loadFromIndexFile('index.npjson') ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne/sim/load.py", line 471, in loadFromIndexFile return loadModel(index, loadMechs=False) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne/sim/load.py", line 494, in loadModel with open(index, 'r') as fileObj: ^^^^^^^^^^^^^^^^ FileNotFoundError: [Errno 2] No such file or directory: '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/HybridTut/src/index.npjson' + true + popd ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/M1/src ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 + pushd examples/M1/src + nrnivmodl ../mod /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/M1/src Mod files: "../mod/../mod/izhi2007b.mod" Creating 'x86_64' directory for .o files. -> Compiling mod_func.cpp -> NMODL ../../mod/izhi2007b.mod Translating izhi2007b.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/M1/src/x86_64/izhi2007b.c Notice: VERBATIM blocks are not thread safe -> Compiling izhi2007b.c => LINKING shared library ./libnrnmech.so => LINKING executable ./special LDFLAGS are: -lreadline -lcurses -lform -lpython3.12 -lX11 -lXext Successfully created x86_64/special + /usr/bin/python3 init.py -nogui Warning: no DISPLAY environment variable. --No graphics will be displayed. -nogui passed, matplotlib is unavailable -nogui passed, matplotlib is unavailable Loading model from /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/M1/src/index.npjson ... Traceback (most recent call last): File "/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/M1/src/init.py", line 3, in cfg, netParams = sim.loadFromIndexFile('index.npjson') ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne/sim/load.py", line 471, in loadFromIndexFile return loadModel(index, loadMechs=False) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne/sim/load.py", line 494, in loadModel with open(index, 'r') as fileObj: ^^^^^^^^^^^^^^^^ FileNotFoundError: [Errno 2] No such file or directory: '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/M1/src/index.npjson' + true + popd ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 + pushd examples/PTcell/src + nrnivmodl ../mod/ /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src Mod files: "../mod/../mod//HCN1.mod" "../mod/../mod//IC.mod" "../mod/../mod//IKsin.mod" "../mod/../mod//MyExp2SynBB.mod" "../mod/../mod//MyExp2SynNMDABB.mod" "../mod/../mod//ar_traub.mod" "../mod/../mod//cadad.mod" "../mod/../mod//cadyn.mod" "../mod/../mod//cagk.mod" "../mod/../mod//cal_mh.mod" "../mod/../mod//cal_mig.mod" "../mod/../mod//can_mig.mod" "../mod/../mod//canin.mod" "../mod/../mod//cat_mig.mod" "../mod/../mod//cat_traub.mod" "../mod/../mod//catcb.mod" "../mod/../mod//gabab.mod" "../mod/../mod//h_BS.mod" "../mod/../mod//h_harnett.mod" "../mod/../mod//h_kole.mod" "../mod/../mod//h_migliore.mod" "../mod/../mod//hin.mod" "../mod/../mod//ican_sidi.mod" "../mod/../mod//kBK.mod" "../mod/../mod//kap_BS.mod" "../mod/../mod//kapcb.mod" "../mod/../mod//kapin.mod" "../mod/../mod//kctin.mod" "../mod/../mod//kdmc_BS.mod" "../mod/../mod//kdr_BS.mod" "../mod/../mod//kdrin.mod" "../mod/../mod//nafx.mod" "../mod/../mod//nap_sidi.mod" "../mod/../mod//nax_BS.mod" "../mod/../mod//savedist.mod" "../mod/../mod//vecstim.mod" Creating 'x86_64' directory for .o files. -> Compiling mod_func.cpp -> NMODL ../../mod//HCN1.mod -> NMODL ../../mod//IC.mod -> NMODL ../../mod//IKsin.mod Translating IC.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/IC.c Translating IKsin.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/IKsin.c Translating HCN1.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/HCN1.c Thread Safe Thread Safe Thread Safe -> NMODL ../../mod//MyExp2SynBB.mod -> NMODL ../../mod//MyExp2SynNMDABB.mod -> NMODL ../../mod//ar_traub.mod Translating MyExp2SynNMDABB.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/MyExp2SynNMDABB.c Translating MyExp2SynBB.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/MyExp2SynBB.c Translating ar_traub.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/ar_traub.c INCLUDEing ghk.inc Thread Safe Thread Safe Warning: celsius undefined. (declared within VERBATIM?) Thread Safe -> NMODL ../../mod//cadad.mod -> NMODL ../../mod//cadyn.mod -> NMODL ../../mod//cagk.mod Translating cadad.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/cadad.c Translating cadyn.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/cadyn.c Translating cagk.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/cagk.c Thread Safe Thread Safe Thread Safe -> NMODL ../../mod//cal_mh.mod -> NMODL ../../mod//cal_mig.mod -> NMODL ../../mod//can_mig.mod Translating cal_mh.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/cal_mh.c Translating can_mig.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/can_mig.cTranslating cal_mig.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/cal_mig.c Thread Safe Thread Safe Warning: Default 2 of PARAMETER cao will be ignored and set by NEURON. Warning: Default 5e-05 of PARAMETER cai will be ignored and set by NEURON. -> NMODL ../../mod//canin.mod Thread Safe Warning: Default 2 of PARAMETER cao will be ignored and set by NEURON. Warning: Default 5e-05 of PARAMETER cai will be ignored and set by NEURON. -> NMODL ../../mod//cat_mig.mod -> NMODL ../../mod//cat_traub.mod Translating canin.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/canin.c Translating cat_mig.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/cat_mig.cThread Safe Translating cat_traub.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/cat_traub.c Thread Safe -> NMODL ../../mod//catcb.mod Warning: Default 2 of PARAMETER cao will be ignored and set by NEURON. Warning: Default 5e-05 of PARAMETER cai will be ignored and set by NEURON. Warning: Default 25 of PARAMETER celsius will be ignored and set by NEURON. Thread Safe -> NMODL ../../mod//gabab.mod -> NMODL ../../mod//h_BS.mod Translating catcb.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/catcb.c Notice: Assignment to the GLOBAL variable, "hinf", is not thread safe Notice: Assignment to the GLOBAL variable, "minf", is not thread safe Translating gabab.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/gabab.c Translating h_BS.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/h_BS.c -> NMODL ../../mod//h_harnett.mod Notice: Assignment to the GLOBAL variable, "warn", is not thread safe Thread Safe Warning: Default 34 of PARAMETER celsius will be ignored and set by NEURON. -> NMODL ../../mod//h_kole.mod Translating h_harnett.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/h_harnett.c -> NMODL ../../mod//h_migliore.mod -> NMODL ../../mod//hin.mod Thread Safe Translating h_kole.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/h_kole.c -> NMODL ../../mod//ican_sidi.mod Thread Safe Translating h_migliore.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/h_miglTranslating hin.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/hin.c iore.c -> NMODL ../../mod//kBK.mod Thread Safe Warning: Default -10 of PARAMETER ehi will be ignored and set by NEURON. Thread Safe -> NMODL ../../mod//kap_BS.mod Translating ican_sidi.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/ican_sidi.c -> NMODL ../../mod//kapcb.mod Translating kBK.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/kBK.c Thread Safe Warning: Default 36 of PARAMETER celsius will be ignored and set by NEURON. Translating kapcb.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/kapcb.c Translating kap_BS.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/kap_BS.c -> NMODL ../../mod//kapin.mod Thread Safe -> NMODL ../../mod//kctin.mod Thread Safe Thread Safe Translating kapin.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/kapin.c -> NMODL ../../mod//kdmc_BS.mod -> NMODL ../../mod//kdr_BS.mod Thread Safe Translating kctin.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/kctin.c Translating kdmc_BS.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/kdmc_BS.c NEURON's CVode method ignores conservation -> NMODL ../../mod//kdrin.mod Translating kdr_BS.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/kdr_BS.c Thread Safe Thread Safe Thread Safe -> NMODL ../../mod//nafx.mod Translating kdrin.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/kdrin.c -> NMODL ../../mod//nap_sidi.mod Thread Safe -> NMODL ../../mod//nax_BS.mod Translating nafx.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/nafx.c -> NMODL ../../mod//savedist.mod Translating nap_sidi.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/nap_sidi.c Translating nax_BS.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/nax_BS.c Thread Safe Warning: Default 55 of PARAMETER ena will be ignored and set by NEURON. Translating savedist.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/savedist.c Thread Safe Thread Safe Thread Safe -> NMODL ../../mod//vecstim.mod -> Compiling HCN1.c -> Compiling IC.c -> Compiling IKsin.c Translating vecstim.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/x86_64/vecstim.c Thread Safe -> Compiling MyExp2SynBB.c -> Compiling MyExp2SynNMDABB.c -> Compiling ar_traub.c -> Compiling cadad.c -> Compiling cadyn.c -> Compiling cagk.c -> Compiling cal_mh.c -> Compiling cal_mig.c -> Compiling can_mig.c -> Compiling canin.c -> Compiling cat_mig.c -> Compiling cat_traub.c -> Compiling catcb.c -> Compiling gabab.c -> Compiling h_BS.c -> Compiling h_harnett.c -> Compiling h_kole.c -> Compiling h_migliore.c -> Compiling hin.c -> Compiling ican_sidi.c -> Compiling kBK.c -> Compiling kap_BS.c -> Compiling kapcb.c -> Compiling kapin.c -> Compiling kctin.c -> Compiling kdmc_BS.c -> Compiling kdr_BS.c -> Compiling kdrin.c -> Compiling nafx.c -> Compiling nap_sidi.c -> Compiling nax_BS.c -> Compiling savedist.c -> Compiling vecstim.c => LINKING shared library ./libnrnmech.so => LINKING executable ./special LDFLAGS are: -lreadline -lcurses -lform -lpython3.12 -lX11 -lXext Successfully created x86_64/special + /usr/bin/python3 init.py -nogui Warning: no DISPLAY environment variable. --No graphics will be displayed. -nogui passed, matplotlib is unavailable -nogui passed, matplotlib is unavailable Loading model from /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/index.npjson ... Traceback (most recent call last): File "/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/init.py", line 17, in cfg, netParams = sim.loadFromIndexFile('index.npjson') ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne/sim/load.py", line 471, in loadFromIndexFile return loadModel(index, loadMechs=False) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/lib/python3.12/site-packages/netpyne/sim/load.py", line 494, in loadModel with open(index, 'r') as fileObj: ^^^^^^^^^^^^^^^^ FileNotFoundError: [Errno 2] No such file or directory: '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/PTcell/src/index.npjson' + true + popd ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 + pushd examples/LFPrecording + nrnivmodl mod /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording Mod files: "mod/mod/IC.mod" "mod/mod/cadad.mod" "mod/mod/cagk.mod" "mod/mod/cal_mig.mod" "mod/mod/can_mig.mod" "mod/mod/cat_mig.mod" "mod/mod/h_kole.mod" "mod/mod/h_migliore.mod" "mod/mod/ican_sidi.mod" "mod/mod/kBK.mod" "mod/mod/kap_BS.mod" "mod/mod/kdmc_BS.mod" "mod/mod/kdr_BS.mod" "mod/mod/nax_BS.mod" "mod/mod/savedist.mod" Creating 'x86_64' directory for .o files. -> Compiling mod_func.cpp -> NMODL ../mod/IC.mod -> NMODL ../mod/cadad.mod -> NMODL ../mod/cagk.mod Translating IC.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/IC.c Translating cadad.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/cadad.c Translating cagk.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/cagk.c Thread Safe Thread Safe Thread Safe -> NMODL ../mod/can_mig.mod -> NMODL ../mod/cal_mig.mod -> NMODL ../mod/cat_mig.mod Translating can_mig.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/can_mig.c Translating cal_mig.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/cal_mig.c Translating cat_mig.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/cat_mig.c Thread Safe Warning: Default 2 of PARAMETER cao will be ignored and set by NEURON. Warning: Default 5e-05 of PARAMETER cai will be ignored and set by NEURON. Warning: Default 2 of PARAMETER cao will be ignored and set by NEURON. Warning: Default 5e-05 of PARAMETER cai will be ignored and set by NEURON. Thread Safe Thread Safe Warning: Default 2 of PARAMETER cao will be ignored and set by NEURON. Warning: Default 5e-05 of PARAMETER cai will be ignored and set by NEURON. Warning: Default 25 of PARAMETER celsius will be ignored and set by NEURON. -> NMODL ../mod/h_kole.mod -> NMODL ../mod/h_migliore.mod -> NMODL ../mod/ican_sidi.mod Translating h_kole.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/h_kole.c Translating ican_sidi.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/ican_Translating h_migliore.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/h_migliore.c sidi.c Thread Safe Thread Safe Thread Safe Warning: Default 36 of PARAMETER celsius will be ignored and set by NEURON. -> NMODL ../mod/kBK.mod -> NMODL ../mod/kap_BS.mod -> NMODL ../mod/kdmc_BS.mod Translating kBK.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/kBK.c Translating kap_BS.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/kap_BS.c Translating kdmc_BS.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/kdmc_BSThread Safe .c Thread Safe -> NMODL ../mod/kdr_BS.mod Thread Safe -> NMODL ../mod/nax_BS.mod -> NMODL ../mod/savedist.mod Translating kdr_BS.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/kdr_BS.c Thread Safe Translating nax_BS.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/nax_BS.c Translating savedist.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/x86_64/savedist.c -> Compiling IC.c Thread Safe Thread Safe -> Compiling cadad.c -> Compiling cagk.c -> Compiling cal_mig.c -> Compiling can_mig.c -> Compiling cat_mig.c -> Compiling h_kole.c -> Compiling h_migliore.c -> Compiling ican_sidi.c -> Compiling kBK.c -> Compiling kap_BS.c -> Compiling kdmc_BS.c -> Compiling kdr_BS.c -> Compiling nax_BS.c -> Compiling savedist.c => LINKING shared library ./libnrnmech.so => LINKING executable ./special LDFLAGS are: -lreadline -lcurses -lform -lpython3.12 -lX11 -lXext Successfully created x86_64/special + /usr/bin/python3 cell_lfp.py -nogui /usr/bin/python3: can't open file '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/LFPrecording/cell_lfp.py': [Errno 2] No such file or directory + true ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 + popd + pushd examples/saving + /usr/bin/python3 init.py -nogui ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/saving ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 /usr/bin/python3: can't open file '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/saving/init.py': [Errno 2] No such file or directory + true + popd ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_buffering ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 + pushd examples/rxd_buffering + /usr/bin/python3 buffering.py -nogui /usr/bin/python3: can't open file '/builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_buffering/buffering.py': [Errno 2] No such file or directory + true ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 + popd + pushd examples/rxd_net/ + nrnivmodl mod /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net Mod files: "mod/mod/HCN1.mod" "mod/mod/IC.mod" "mod/mod/IKsin.mod" "mod/mod/ar_traub.mod" "mod/mod/cadad.mod" "mod/mod/cadyn.mod" "mod/mod/cagk.mod" "mod/mod/cal_mh.mod" "mod/mod/cal_mig.mod" "mod/mod/can_mig.mod" "mod/mod/canin.mod" "mod/mod/cat_mig.mod" "mod/mod/cat_traub.mod" "mod/mod/catcb.mod" "mod/mod/gabab.mod" "mod/mod/h_BS.mod" "mod/mod/h_harnett.mod" "mod/mod/h_kole.mod" "mod/mod/h_migliore.mod" "mod/mod/hin.mod" "mod/mod/ican_sidi.mod" "mod/mod/kBK.mod" "mod/mod/kap_BS.mod" "mod/mod/kapcb.mod" "mod/mod/kapin.mod" "mod/mod/kctin.mod" "mod/mod/kdmc_BS.mod" "mod/mod/kdr_BS.mod" "mod/mod/kdrin.mod" "mod/mod/nafx.mod" "mod/mod/nap_sidi.mod" "mod/mod/nax_BS.mod" "mod/mod/savedist.mod" "mod/mod/vecstim.mod" Creating 'x86_64' directory for .o files. -> Compiling mod_func.cpp -> NMODL ../mod/IKsin.mod -> NMODL ../mod/IC.mod -> NMODL ../mod/HCN1.mod Translating HCN1.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/HCN1.c Translating IKsin.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/IKsin.c Translating IC.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/IC.c Thread Safe Thread Safe Thread Safe -> NMODL ../mod/cadad.mod -> NMODL ../mod/ar_traub.mod -> NMODL ../mod/cadyn.mod Translating cadad.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/cadad.c Translating ar_traub.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/ar_traub.c Thread Safe Translating cadyn.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/cadyn.c Thread Safe Thread Safe -> NMODL ../mod/cagk.mod -> NMODL ../mod/cal_mh.mod -> NMODL ../mod/cal_mig.mod Translating cagk.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/cagk.c Translating cal_mh.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/cal_mh.c Translating cal_mig.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/cal_mig.c Thread Safe Thread Safe -> NMODL ../mod/can_mig.mod -> NMODL ../mod/canin.mod Warning: Default 2 of PARAMETER cao will be ignored and set by NEURON. Warning: Default 5e-05 of PARAMETER cai will be ignored and set by NEURON. Thread Safe -> NMODL ../mod/cat_mig.mod Translating can_mig.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/can_mig.c Translating canin.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/canin.c Thread Safe Warning: Default 2 of PARAMETER cao will be ignored and set by NEURON. Warning: Default 5e-05 of PARAMETER cai will be ignored and set by NEURON. Translating cat_mig.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/cat_mig.c Thread Safe -> NMODL ../mod/cat_traub.mod Thread Safe -> NMODL ../mod/catcb.mod Warning: Default 2 of PARAMETER cao will be ignored and set by NEURON. Warning: Default 5e-05 of PARAMETER cai will be ignored and set by NEURON. Warning: Default 25 of PARAMETER celsius will be ignored and set by NEURON. -> NMODL ../mod/gabab.mod Translating cat_traub.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/cat_traub.c Translating catcb.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/catcb.c Thread Safe Notice: Assignment to the GLOBAL variable, "hinf", is not thread safe Notice: Assignment to the GLOBAL variable, "minf", is not thread safe Translating gabab.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/gabab.c -> NMODL ../mod/h_BS.mod Notice: Assignment to the GLOBAL variable, "warn", is not thread safe -> NMODL ../mod/h_harnett.mod -> NMODL ../mod/h_kole.mod Translating h_BS.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/h_BS.c Translating h_harnett.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/h_harnett.c Thread Safe Warning: Default 34 of PARAMETER celsius will be ignored and set by NEURON. Thread Safe Translating h_kole.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/h_kole.c -> NMODL ../mod/h_migliore.mod Thread Safe -> NMODL ../mod/hin.mod -> NMODL ../mod/ican_sidi.mod Translating h_migliore.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/h_migliore.c -> NMODL ../mod/kBK.mod Thread Safe Translating hin.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/hin.c Thread Safe Translating ican_sidi.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/ican_sidi.c Warning: Default -10 of PARAMETER ehi will be ignored and set by NEURON. -> NMODL ../mod/kap_BS.mod Translating kBK.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/kBK.c -> NMODL ../mod/kapcb.mod Thread Safe Warning: Default 36 of PARAMETER celsius will be ignored and set by NEURON. Thread Safe -> NMODL ../mod/kapin.mod Translating kap_BS.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/kap_BS.c Translating kapcb.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/kapcb.c -> NMODL ../mod/kctin.mod Thread Safe Translating kapin.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/kapin.c -> NMODL ../mod/kdmc_BS.mod Thread Safe Translating kctin.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/kctin.c Thread Safe -> NMODL ../mod/kdr_BS.mod NEURON's CVode method ignores conservation Translating kdmc_BS.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/kdmc_BS.c -> NMODL ../mod/kdrin.mod Thread Safe -> NMODL ../mod/nafx.mod Thread Safe Translating kdr_BS.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/kdr_BS.c Translating kdrin.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/kdrin.c -> NMODL ../mod/nap_sidi.mod Thread Safe Thread Safe Translating nafx.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/nafx.c -> NMODL ../mod/nax_BS.mod Thread Safe -> NMODL ../mod/savedist.mod Warning: Default 55 of PARAMETER ena will be ignored and set by NEURON. Translating nap_sidi.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/nap_sidi.c Translating nax_BS.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/nax_BS.c -> NMODL ../mod/vecstim.mod Thread Safe -> Compiling HCN1.c Translating savedist.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/savedist.c Thread Safe Thread Safe Translating vecstim.mod into /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/x86_64/vecstim.c -> Compiling IC.c -> Compiling IKsin.c Thread Safe -> Compiling ar_traub.c -> Compiling cadad.c -> Compiling cadyn.c -> Compiling cagk.c -> Compiling cal_mh.c -> Compiling cal_mig.c -> Compiling can_mig.c -> Compiling canin.c -> Compiling cat_mig.c -> Compiling cat_traub.c -> Compiling catcb.c -> Compiling gabab.c -> Compiling h_BS.c -> Compiling h_harnett.c -> Compiling h_kole.c -> Compiling h_migliore.c -> Compiling hin.c -> Compiling ican_sidi.c -> Compiling kBK.c -> Compiling kap_BS.c -> Compiling kapcb.c -> Compiling kapin.c -> Compiling kctin.c -> Compiling kdmc_BS.c -> Compiling kdr_BS.c -> Compiling kdrin.c -> Compiling nafx.c -> Compiling nap_sidi.c -> Compiling nax_BS.c -> Compiling savedist.c -> Compiling vecstim.c => LINKING shared library ./libnrnmech.so => LINKING executable ./special LDFLAGS are: -lreadline -lcurses -lform -lpython3.12 -lX11 -lXext Successfully created x86_64/special + /usr/bin/python3 src/init.py -nogui Warning: no DISPLAY environment variable. --No graphics will be displayed. -nogui passed, matplotlib is unavailable -nogui passed, matplotlib is unavailable Loading model from /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/examples/rxd_net/index.npjson ... Loading simConfig: src/cfg.py ... Loading netParams: src/netParams.py ... Start time: 2024-05-31 20:43:35.314693 Creating network of 6 cell populations on 1 hosts... Number of cells on node 0: 60 Done; cell creation time = 0.03 s. Making connections... Number of connections on node 0: 309 Done; cell connection time = 0.03 s. Adding stims... Number of stims on node 0: 60 Done; cell stims creation time = 0.00 s. Adding RxD... Created Region cyt Created Region er Created Region cyt_er_membrane Created Extracellular Region ecs Created Species ca Created Species ip3 Created State ip3r_gate_state Created MultiCompartmentReaction serca Created MultiCompartmentReaction leak Created MultiCompartmentReaction ip3r Created Rate ip3rg Done; RxD setup time = 0.01 s. Recording 4 traces of 4 types on node 0 Running simulation using NEURON for 1000.0 ms... Done; run time = 36.23 s; real-time ratio: 0.03. Gathering data... Done; gather time = 0.03 s. Analyzing... Cells: 60 Connections: 369 (6.15 per cell) Spikes: 937 (15.62 Hz) Simulated time: 1.0 s; 1 workers Run time: 36.23 s Warning: data won't be saved. No output format specified (consider sim.cfg.savePickle, sim.cfg.saveJson etc.) + popd + RPM_EC=0 ~/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6 ++ jobs -p + exit 0 Processing files: python3-netpyne-1.0.6-4.fc41.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.kj7brL + umask 022 + cd /builddir/build/BUILD/python-netpyne-1.0.6-build + cd netpyne-1.0.6 + DOCDIR=/builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/share/doc/python3-netpyne + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/share/doc/python3-netpyne + cp -pr /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/README.md /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/share/doc/python3-netpyne + cp -pr /builddir/build/BUILD/python-netpyne-1.0.6-build/netpyne-1.0.6/CHANGES.md /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT/usr/share/doc/python3-netpyne + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-netpyne = 1.0.6-4.fc41 python3-netpyne = 1.0.6-4.fc41 python3.12-netpyne = 1.0.6-4.fc41 python3.12dist(netpyne) = 1.0.6 python3dist(netpyne) = 1.0.6 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(bokeh) python3.12dist(lfpykit) python3.12dist(matplotlib) python3.12dist(matplotlib-scalebar) python3.12dist(numpy) python3.12dist(pandas) python3.12dist(schema) python3.12dist(scipy) Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/python-netpyne-1.0.6-build/BUILDROOT Wrote: /builddir/build/SRPMS/python-netpyne-1.0.6-4.fc41.src.rpm Wrote: /builddir/build/RPMS/python3-netpyne-1.0.6-4.fc41.noarch.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.stqni4 + umask 022 + cd /builddir/build/BUILD/python-netpyne-1.0.6-build + test -d /builddir/build/BUILD/python-netpyne-1.0.6-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-netpyne-1.0.6-build + rm -rf /builddir/build/BUILD/python-netpyne-1.0.6-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild python-netpyne-1.0.6-4.fc41.src.rpm Finish: build phase for python-netpyne-1.0.6-4.fc41.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1717188061.300765/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-x86_64-1717188061.300765/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1717188061.300765/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/python-netpyne-1.0.6-4.fc41.src.rpm) Config(child) 1 minutes 37 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "python-netpyne", "epoch": null, "version": "1.0.6", "release": "4.fc41", "arch": "src" }, { "name": "python3-netpyne", "epoch": null, "version": "1.0.6", "release": "4.fc41", "arch": "noarch" } ] } RPMResults finished