Warning: Permanently added '163.109.91.101' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8801779-fedora-41-s390x --chroot fedora-41-s390x Version: 1.2 PID: 8826 Logging PID: 8827 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8801779, 'buildroot_pkgs': [], 'chroot': 'fedora-41-s390x', 'enable_net': False, 'fedora_review': False, 'git_hash': '222fe29595cf6ea34bc447e198447e13a0c96247', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3/snakemake', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'snakemake', 'package_version': '8.30.0-1', 'project_dirname': 'scipy-1.8.3', 'project_name': 'scipy-1.8.3', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/scipy-1.8.3/fedora-41-s390x/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/scipy-1.8.3--https://src.fedoraproject.org/user/music', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'https://src.fedoraproject.org/user/music', 'tags': [], 'task_id': '8801779-fedora-41-s390x', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3/snakemake /var/lib/copr-rpmbuild/workspace/workdir-6_utotv4/snakemake --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3/snakemake', '/var/lib/copr-rpmbuild/workspace/workdir-6_utotv4/snakemake', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-6_utotv4/snakemake'... Running: git checkout 222fe29595cf6ea34bc447e198447e13a0c96247 -- cmd: ['git', 'checkout', '222fe29595cf6ea34bc447e198447e13a0c96247', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-6_utotv4/snakemake rc: 0 stdout: stderr: Note: switching to '222fe29595cf6ea34bc447e198447e13a0c96247'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 222fe29 automatic import of snakemake Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-6_utotv4/snakemake rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading snakemake-8.30.0-assets.tar.zst INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o snakemake-8.30.0-assets.tar.zst --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/scipy-1.8.3/snakemake/snakemake-8.30.0-assets.tar.zst/md5/c3faec4a1171aee573d1c84121ca9631/snakemake-8.30.0-assets.tar.zst % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 572k 100 572k 0 0 569k 0 0:00:01 0:00:01 --:--:-- 569k INFO: Reading stdout from command: md5sum snakemake-8.30.0-assets.tar.zst INFO: Downloading snakemake-8.30.0.tar.gz INFO: Calling: curl -H Pragma: -o snakemake-8.30.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/scipy-1.8.3/snakemake/snakemake-8.30.0.tar.gz/md5/a0871722bed51cf3e3d69829ccc8d07e/snakemake-8.30.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 8637k 100 8637k 0 0 5230k 0 0:00:01 0:00:01 --:--:-- 5228k INFO: Reading stdout from command: md5sum snakemake-8.30.0.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-6_utotv4/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-6_utotv4/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1742578099.344400 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.1 starting (python version = 3.13.0, NVR = mock-6.1-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-6_utotv4/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-6_utotv4/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1742578099.344400 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-6_utotv4/snakemake/snakemake.spec) Config(fedora-41-s390x) Start: clean chroot Finish: clean chroot Mock Version: 6.1 INFO: Mock Version: 6.1 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-s390x-bootstrap-1742578099.344400/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:41 INFO: Pulling image: registry.fedoraproject.org/fedora:41 INFO: Tagging container image as mock-bootstrap-3f6a2e96-b918-47f9-9707-2b602a633f52 INFO: Checking that 5cd6f0c3fcbbee528e7cb6414207e1bc420e582114c4ab5d3ea9c0c1241d132d image matches host's architecture INFO: Copy content of container 5cd6f0c3fcbbee528e7cb6414207e1bc420e582114c4ab5d3ea9c0c1241d132d to /var/lib/mock/fedora-41-s390x-bootstrap-1742578099.344400/root INFO: mounting 5cd6f0c3fcbbee528e7cb6414207e1bc420e582114c4ab5d3ea9c0c1241d132d with podman image mount INFO: image 5cd6f0c3fcbbee528e7cb6414207e1bc420e582114c4ab5d3ea9c0c1241d132d as /var/lib/containers/storage/overlay/7754e409f3e55955bdf48fc2b4ebfc0d82ed2d49a366b437952617d77b01d4f5/merged INFO: umounting image 5cd6f0c3fcbbee528e7cb6414207e1bc420e582114c4ab5d3ea9c0c1241d132d (/var/lib/containers/storage/overlay/7754e409f3e55955bdf48fc2b4ebfc0d82ed2d49a366b437952617d77b01d4f5/merged) with podman image umount INFO: Removing image mock-bootstrap-3f6a2e96-b918-47f9-9707-2b602a633f52 INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-s390x-1742578099.344400/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.1-1.fc41.s390x rpm-sequoia-1.7.0-5.fc41.s390x dnf5-5.2.12.0-1.fc41.s390x dnf5-plugins-5.2.12.0-1.fc41.s390x Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 7.2 MiB/s | 10.3 MiB | 00m01s fedora 100% | 8.2 MiB/s | 32.8 MiB | 00m04s Copr repository 100% | 378.0 KiB/s | 334.5 KiB | 00m01s Additional repo http_kojipkgs_fedorapr 100% | 4.5 MiB/s | 13.8 MiB | 00m03s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash s390x 5.2.37-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.3 MiB bzip2 s390x 1.0.8-20.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 86.9 KiB coreutils s390x 9.6-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.7 MiB cpio s390x 2.15-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB diffutils s390x 3.10-9.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 MiB fedora-release-common noarch 43-0.7 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.3 KiB findutils s390x 1:4.10.0-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB gawk s390x 5.3.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB glibc-minimal-langpack s390x 2.41.9000-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B grep s390x 3.11-10.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB gzip s390x 1.13-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 396.6 KiB info s390x 7.2-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 397.0 KiB patch s390x 2.7.6-26.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 290.2 KiB redhat-rpm-config noarch 342-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 186.8 KiB rpm-build s390x 4.20.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 162.9 KiB sed s390x 4.9-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 865.0 KiB shadow-utils s390x 2:4.17.4-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.0 MiB tar s390x 2:1.35-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.0 MiB unzip s390x 6.0-66.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 393.5 KiB util-linux s390x 2.40.4-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.2 MiB which s390x 2.23-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 83.1 KiB xz s390x 1:5.6.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB Installing dependencies: add-determinism s390x 0.6.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.5 MiB alternatives s390x 1.32-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 62.0 KiB ansible-srpm-macros noarch 1-17.1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 35.7 KiB audit-libs s390x 4.0.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 362.9 KiB binutils s390x 2.44-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 27.3 MiB build-reproducibility-srpm-macros noarch 0.6.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 735.0 B bzip2-libs s390x 1.0.8-20.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.4 KiB ca-certificates noarch 2024.2.69_v8.0.401-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.6 MiB coreutils-common s390x 9.6-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.1 MiB crypto-policies noarch 20250305-1.gita35b0fa.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 136.4 KiB curl s390x 8.13.0~rc2-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 488.8 KiB cyrus-sasl-lib s390x 2.1.28-30.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB debugedit s390x 5.1-5.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 196.2 KiB dwz s390x 0.15-9.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 310.4 KiB ed s390x 1.21-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 146.3 KiB efi-srpm-macros noarch 6-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.1 KiB elfutils s390x 0.192-9.fc41 updates 3.0 MiB elfutils-debuginfod-client s390x 0.192-9.fc41 updates 75.7 KiB elfutils-default-yama-scope noarch 0.192-9.fc41 updates 1.8 KiB elfutils-libelf s390x 0.192-9.fc41 updates 1.2 MiB elfutils-libs s390x 0.192-9.fc41 updates 758.2 KiB fedora-gpg-keys noarch 43-0.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 128.2 KiB fedora-release noarch 43-0.7 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B fedora-release-identity-basic noarch 43-0.7 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 719.0 B fedora-repos noarch 43-0.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.9 KiB fedora-repos-rawhide noarch 43-0.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 KiB file s390x 5.46-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100.0 KiB file-libs s390x 5.46-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.9 MiB filesystem s390x 3.18-38.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.0 B filesystem-srpm-macros noarch 3.18-38.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38.2 KiB fonts-srpm-macros noarch 1:2.0.5-21.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 55.8 KiB forge-srpm-macros noarch 0.4.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38.9 KiB fpc-srpm-macros noarch 1.3-14.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144.0 B gdb-minimal s390x 16.2-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 15.2 MiB gdbm-libs s390x 1:1.23-9.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 125.4 KiB ghc-srpm-macros noarch 1.9.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 779.0 B glibc s390x 2.41.9000-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.1 MiB glibc-common s390x 2.41.9000-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB glibc-gconv-extra s390x 2.41.9000-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.7 MiB gmp s390x 1:6.3.0-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 769.8 KiB gnat-srpm-macros noarch 6-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 KiB go-srpm-macros noarch 3.6.0-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 60.8 KiB jansson s390x 2.14-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.8 KiB json-c s390x 0.18-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 82.4 KiB kernel-srpm-macros noarch 1.0-25.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB keyutils-libs s390x 1.6.3-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 50.1 KiB krb5-libs s390x 1.21.3-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB libacl s390x 2.3.2-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 34.1 KiB libarchive s390x 3.7.7-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB libattr s390x 2.5.2-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22.9 KiB libblkid s390x 2.40.4-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 278.3 KiB libbrotli s390x 1.1.0-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 908.7 KiB libcap s390x 2.73-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 209.0 KiB libcap-ng s390x 0.8.5-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 60.4 KiB libcom_err s390x 1.47.2-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 58.9 KiB libcurl s390x 8.13.0~rc2-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 902.3 KiB 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 69.7 KiB libunistring s390x 1.1-9.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB libuuid s390x 2.40.4-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 33.1 KiB libverto s390x 0.3.2-10.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 25.1 KiB libxcrypt s390x 4.4.38-6.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 288.2 KiB libxml2 s390x 2.12.10-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 MiB libzstd s390x 1.5.7-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 875.5 KiB lua-libs s390x 5.4.7-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 316.8 KiB lua-srpm-macros noarch 1-15.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 KiB lz4-libs s390x 1.10.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 197.2 KiB mpfr s390x 4.2.2-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 699.5 KiB ncurses-base noarch 6.5-5.20250125.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 326.8 KiB ncurses-libs s390x 6.5-5.20250125.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB ocaml-srpm-macros noarch 10-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB openblas-srpm-macros noarch 2-19.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.0 B openldap s390x 2.6.9-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 668.7 KiB openssl-libs s390x 1:3.2.4-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.1 MiB p11-kit s390x 0.25.5-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.5 MiB p11-kit-trust s390x 0.25.5-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 462.9 KiB package-notes-srpm-macros noarch 0.5-13.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 KiB pam-libs s390x 1.7.0-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 122.0 KiB pcre2 s390x 10.45-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 717.0 KiB pcre2-syntax noarch 10.45-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 273.9 KiB perl-srpm-macros noarch 1-57.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.0 B pkgconf s390x 2.3.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.2 KiB pkgconf-m4 noarch 2.3.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.4 KiB pkgconf-pkg-config s390x 2.3.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 988.0 B popt s390x 1.19-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 140.5 KiB publicsuffix-list-dafsa noarch 20250116-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 68.5 KiB pyproject-srpm-macros noarch 1.18.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB python-srpm-macros noarch 3.13-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51.0 KiB qt5-srpm-macros noarch 5.15.16-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.0 B qt6-srpm-macros noarch 6.8.2-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 464.0 B readline s390x 8.2-13.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 540.6 KiB rpm s390x 4.20.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.0 MiB rpm-build-libs s390x 4.20.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 214.3 KiB rpm-libs s390x 4.20.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 805.3 KiB rpm-sequoia s390x 1.7.0-5.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.2 MiB rust-srpm-macros noarch 26.3-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.15.0-23.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 724.7 KiB sqlite-libs s390x 3.49.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB systemd-libs s390x 257.4-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB systemd-standalone-sysusers s390x 257.4-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 281.2 KiB tree-sitter-srpm-macros noarch 0.2.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.9 KiB util-linux-core s390x 2.40.4-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB xxhash-libs s390x 0.8.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 65.7 KiB xz-libs s390x 1:5.6.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 218.0 KiB zig-srpm-macros noarch 1-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip s390x 3.0-43.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 729.6 KiB zlib-ng-compat s390x 2.2.4-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 109.1 KiB zstd s390x 1.5.7-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 148 packages Total size of inbound packages is 53 MiB. Need to download 53 MiB. After this operation, 181 MiB extra will be used (install 181 MiB, remove 0 B). [ 1/148] bzip2-0:1.0.8-20.fc42.s390x 100% | 56.8 KiB/s | 52.8 KiB | 00m01s [ 2/148] cpio-0:2.15-2.fc41.s390x 100% | 557.8 KiB/s | 290.0 KiB | 00m01s [ 3/148] coreutils-0:9.6-2.fc43.s390x 100% | 838.0 KiB/s | 1.2 MiB | 00m01s [ 4/148] bash-0:5.2.37-3.fc43.s390x 100% | 1.2 MiB/s | 1.8 MiB | 00m02s [ 5/148] diffutils-0:3.10-9.fc42.s390x 100% | 1.5 MiB/s | 409.6 KiB | 00m00s [ 6/148] fedora-release-common-0:43-0. 100% | 99.3 KiB/s | 25.7 KiB | 00m00s [ 7/148] findutils-1:4.10.0-5.fc42.s39 100% | 2.0 MiB/s | 548.9 KiB | 00m00s [ 8/148] glibc-minimal-langpack-0:2.41 100% | 484.0 KiB/s | 127.8 KiB | 00m00s [ 9/148] gawk-0:5.3.1-1.fc42.s390x 100% | 4.1 MiB/s | 1.1 MiB | 00m00s [ 10/148] grep-0:3.11-10.fc42.s390x 100% | 1.1 MiB/s | 294.4 KiB | 00m00s [ 11/148] gzip-0:1.13-3.fc42.s390x 100% | 653.3 KiB/s | 171.2 KiB | 00m00s [ 12/148] info-0:7.2-3.fc42.s390x 100% | 736.4 KiB/s | 192.9 KiB | 00m00s [ 13/148] patch-0:2.7.6-26.fc42.s390x 100% | 531.4 KiB/s | 139.2 KiB | 00m00s [ 14/148] redhat-rpm-config-0:342-2.fc4 100% | 286.9 KiB/s | 74.9 KiB | 00m00s [ 15/148] rpm-build-0:4.20.1-1.fc43.s39 100% | 285.2 KiB/s | 75.0 KiB | 00m00s [ 16/148] sed-0:4.9-4.fc42.s390x 100% | 1.2 MiB/s | 311.0 KiB | 00m00s [ 17/148] shadow-utils-2:4.17.4-1.fc43. 100% | 4.7 MiB/s | 1.3 MiB | 00m00s [ 18/148] unzip-0:6.0-66.fc42.s390x 100% | 735.8 KiB/s | 192.8 KiB | 00m00s [ 19/148] tar-2:1.35-5.fc42.s390x 100% | 2.2 MiB/s | 869.5 KiB | 00m00s [ 20/148] util-linux-0:2.40.4-7.fc43.s3 100% | 4.0 MiB/s | 1.1 MiB | 00m00s [ 21/148] which-0:2.23-1.fc42.s390x 100% | 164.1 KiB/s | 43.0 KiB | 00m00s [ 22/148] xz-1:5.6.3-3.fc42.s390x 100% | 1.7 MiB/s | 462.1 KiB | 00m00s [ 23/148] coreutils-common-0:9.6-2.fc43 100% | 7.6 MiB/s | 2.1 MiB | 00m00s [ 24/148] fedora-repos-0:43-0.1.noarch 100% | 35.7 KiB/s | 9.3 KiB | 00m00s [ 25/148] filesystem-0:3.18-38.fc43.s39 100% | 3.4 MiB/s | 1.3 MiB | 00m00s [ 26/148] glibc-0:2.41.9000-2.fc43.s390 100% | 7.0 MiB/s | 1.9 MiB | 00m00s [ 27/148] glibc-common-0:2.41.9000-2.fc 100% | 1.6 MiB/s | 426.7 KiB | 00m00s [ 28/148] filesystem-srpm-macros-0:3.18 100% | 97.4 KiB/s | 25.5 KiB | 00m00s [ 29/148] rpm-0:4.20.1-1.fc43.s390x 100% | 1.9 MiB/s | 518.9 KiB | 00m00s [ 30/148] libblkid-0:2.40.4-7.fc43.s390 100% | 483.2 KiB/s | 126.1 KiB | 00m00s [ 31/148] libfdisk-0:2.40.4-7.fc43.s390 100% | 613.9 KiB/s | 160.2 KiB | 00m00s [ 32/148] libmount-0:2.40.4-7.fc43.s390 100% | 589.8 KiB/s | 154.5 KiB | 00m00s [ 33/148] libsmartcols-0:2.40.4-7.fc43. 100% | 310.8 KiB/s | 82.0 KiB | 00m00s [ 34/148] libuuid-0:2.40.4-7.fc43.s390x 100% | 98.7 KiB/s | 25.7 KiB | 00m00s [ 35/148] util-linux-core-0:2.40.4-7.fc 100% | 1.9 MiB/s | 518.2 KiB | 00m00s [ 36/148] xz-libs-1:5.6.3-3.fc42.s390x 100% | 449.4 KiB/s | 117.7 KiB | 00m00s [ 37/148] fedora-gpg-keys-0:43-0.1.noar 100% | 475.9 KiB/s | 125.2 KiB | 00m00s [ 38/148] fedora-repos-rawhide-0:43-0.1 100% | 33.6 KiB/s | 8.8 KiB | 00m00s [ 39/148] glibc-gconv-extra-0:2.41.9000 100% | 6.1 MiB/s | 1.6 MiB | 00m00s [ 40/148] rpm-libs-0:4.20.1-1.fc43.s390 100% | 1.2 MiB/s | 324.6 KiB | 00m00s [ 41/148] rpm-build-libs-0:4.20.1-1.fc4 100% | 388.5 KiB/s | 101.8 KiB | 00m00s [ 42/148] libxcrypt-0:4.4.38-6.fc43.s39 100% | 502.0 KiB/s | 132.0 KiB | 00m00s [ 43/148] systemd-libs-0:257.4-3.fc43.s 100% | 2.9 MiB/s | 814.0 KiB | 00m00s [ 44/148] libselinux-0:3.8-1.fc42.s390x 100% | 383.8 KiB/s | 100.2 KiB | 00m00s [ 45/148] libsepol-0:3.8-1.fc42.s390x 100% | 1.3 MiB/s | 348.3 KiB | 00m00s [ 46/148] ncurses-libs-0:6.5-5.20250125 100% | 1.3 MiB/s | 358.5 KiB | 00m00s [ 47/148] ncurses-base-0:6.5-5.20250125 100% | 243.4 KiB/s | 63.5 KiB | 00m00s [ 48/148] audit-libs-0:4.0.3-2.fc42.s39 100% | 484.8 KiB/s | 126.5 KiB | 00m00s [ 49/148] pam-libs-0:1.7.0-4.fc42.s390x 100% | 226.6 KiB/s | 58.9 KiB | 00m00s [ 50/148] libeconf-0:0.7.6-1.fc43.s390x 100% | 139.3 KiB/s | 36.3 KiB | 00m00s [ 51/148] zlib-ng-compat-0:2.2.4-2.fc43 100% | 256.2 KiB/s | 66.9 KiB | 00m00s [ 52/148] libcap-ng-0:0.8.5-4.fc42.s390 100% | 125.4 KiB/s | 32.7 KiB | 00m00s [ 53/148] readline-0:8.2-13.fc43.s390x 100% | 873.1 KiB/s | 228.8 KiB | 00m00s [ 54/148] bzip2-libs-0:1.0.8-20.fc42.s3 100% | 182.8 KiB/s | 47.9 KiB | 00m00s [ 55/148] libacl-0:2.3.2-3.fc42.s390x 100% | 90.9 KiB/s | 23.6 KiB | 00m00s [ 56/148] libgcc-0:15.0.1-0.10.fc43.s39 100% | 300.9 KiB/s | 78.5 KiB | 00m00s [ 57/148] libcap-0:2.73-2.fc42.s390x 100% | 334.6 KiB/s | 87.3 KiB | 00m00s [ 58/148] setup-0:2.15.0-23.fc43.noarch 100% | 581.2 KiB/s | 151.1 KiB | 00m00s [ 59/148] libsemanage-0:3.8-1.fc42.s390 100% | 468.7 KiB/s | 122.3 KiB | 00m00s [ 60/148] libzstd-0:1.5.7-1.fc43.s390x 100% | 1.3 MiB/s | 351.0 KiB | 00m00s [ 61/148] lua-libs-0:5.4.7-3.fc43.s390x 100% | 539.0 KiB/s | 140.7 KiB | 00m00s [ 62/148] rpm-sequoia-0:1.7.0-5.fc43.s3 100% | 3.9 MiB/s | 1.0 MiB | 00m00s [ 63/148] sqlite-libs-0:3.49.0-1.fc43.s 100% | 3.0 MiB/s | 806.1 KiB | 00m00s [ 64/148] popt-0:1.19-8.fc42.s390x 100% | 235.6 KiB/s | 61.5 KiB | 00m00s [ 65/148] elfutils-libelf-0:0.192-9.fc4 100% | 158.8 KiB/s | 212.7 KiB | 00m01s [ 66/148] elfutils-libs-0:0.192-9.fc41. 100% | 207.1 KiB/s | 285.2 KiB | 00m01s [ 67/148] elfutils-debuginfod-client-0: 100% | 222.1 KiB/s | 47.3 KiB | 00m00s [ 68/148] elfutils-0:0.192-9.fc41.s390x 100% | 410.1 KiB/s | 595.5 KiB | 00m01s [ 69/148] libgomp-0:15.0.1-0.10.fc43.s3 100% | 909.9 KiB/s | 354.9 KiB | 00m00s [ 70/148] file-0:5.46-1.fc42.s390x 100% | 94.5 KiB/s | 49.0 KiB | 00m01s [ 71/148] file-libs-0:5.46-1.fc42.s390x 100% | 1.3 MiB/s | 853.8 KiB | 00m01s [ 72/148] alternatives-0:1.32-1.fc43.s3 100% | 161.3 KiB/s | 42.6 KiB | 00m00s [ 73/148] jansson-0:2.14-2.fc42.s390x 100% | 172.3 KiB/s | 45.2 KiB | 00m00s [ 74/148] binutils-0:2.44-3.fc43.s390x 100% | 9.2 MiB/s | 6.0 MiB | 00m01s [ 75/148] debugedit-0:5.1-5.fc43.s390x 100% | 309.6 KiB/s | 81.1 KiB | 00m00s [ 76/148] libarchive-0:3.7.7-4.fc43.s39 100% | 1.6 MiB/s | 444.3 KiB | 00m00s [ 77/148] pkgconf-pkg-config-0:2.3.0-2. 100% | 37.7 KiB/s | 9.8 KiB | 00m00s [ 78/148] pkgconf-0:2.3.0-2.fc42.s390x 100% | 176.2 KiB/s | 45.6 KiB | 00m00s [ 79/148] zstd-0:1.5.7-1.fc43.s390x 100% | 805.3 KiB/s | 522.7 KiB | 00m01s [ 80/148] pkgconf-m4-0:2.3.0-2.fc42.noa 100% | 55.0 KiB/s | 14.2 KiB | 00m00s [ 81/148] libpkgconf-0:2.3.0-2.fc42.s39 100% | 147.4 KiB/s | 38.5 KiB | 00m00s [ 82/148] curl-0:8.13.0~rc2-1.fc43.s390 100% | 884.0 KiB/s | 232.5 KiB | 00m00s [ 83/148] build-reproducibility-srpm-ma 100% | 44.9 KiB/s | 11.7 KiB | 00m00s [ 84/148] add-determinism-0:0.6.0-1.fc4 100% | 2.9 MiB/s | 1.1 MiB | 00m00s [ 85/148] efi-srpm-macros-0:6-3.fc43.no 100% | 85.5 KiB/s | 22.5 KiB | 00m00s [ 86/148] forge-srpm-macros-0:0.4.0-2.f 100% | 76.3 KiB/s | 19.9 KiB | 00m00s [ 87/148] go-srpm-macros-0:3.6.0-6.fc42 100% | 106.4 KiB/s | 27.7 KiB | 00m00s [ 88/148] pyproject-srpm-macros-0:1.18. 100% | 53.1 KiB/s | 13.9 KiB | 00m00s [ 89/148] qt6-srpm-macros-0:6.8.2-2.fc4 100% | 35.5 KiB/s | 9.3 KiB | 00m00s [ 90/148] tree-sitter-srpm-macros-0:0.2 100% | 45.2 KiB/s | 11.9 KiB | 00m00s [ 91/148] ansible-srpm-macros-0:1-17.1. 100% | 78.1 KiB/s | 20.3 KiB | 00m00s [ 92/148] dwz-0:0.15-9.fc42.s390x 100% | 543.0 KiB/s | 143.3 KiB | 00m00s [ 93/148] fonts-srpm-macros-1:2.0.5-21. 100% | 104.6 KiB/s | 27.1 KiB | 00m00s [ 94/148] fpc-srpm-macros-0:1.3-14.fc42 100% | 31.0 KiB/s | 8.0 KiB | 00m00s [ 95/148] ghc-srpm-macros-0:1.9.2-2.fc4 100% | 35.4 KiB/s | 9.2 KiB | 00m00s [ 96/148] gnat-srpm-macros-0:6-7.fc42.n 100% | 33.4 KiB/s | 8.6 KiB | 00m00s [ 97/148] kernel-srpm-macros-0:1.0-25.f 100% | 38.3 KiB/s | 9.9 KiB | 00m00s [ 98/148] lua-srpm-macros-0:1-15.fc42.n 100% | 34.4 KiB/s | 8.9 KiB | 00m00s [ 99/148] ocaml-srpm-macros-0:10-4.fc42 100% | 35.7 KiB/s | 9.2 KiB | 00m00s [100/148] openblas-srpm-macros-0:2-19.f 100% | 30.1 KiB/s | 7.8 KiB | 00m00s [101/148] package-notes-srpm-macros-0:0 100% | 35.8 KiB/s | 9.3 KiB | 00m00s [102/148] perl-srpm-macros-0:1-57.fc42. 100% | 33.0 KiB/s | 8.5 KiB | 00m00s [103/148] python-srpm-macros-0:3.13-4.f 100% | 89.1 KiB/s | 23.0 KiB | 00m00s [104/148] qt5-srpm-macros-0:5.15.16-1.f 100% | 33.7 KiB/s | 8.8 KiB | 00m00s [105/148] rust-srpm-macros-0:26.3-4.fc4 100% | 45.2 KiB/s | 11.7 KiB | 00m00s [106/148] zig-srpm-macros-0:1-4.fc42.no 100% | 31.8 KiB/s | 8.2 KiB | 00m00s [107/148] zip-0:3.0-43.fc42.s390x 100% | 1.0 MiB/s | 280.3 KiB | 00m00s [108/148] ed-0:1.21-2.fc42.s390x 100% | 320.5 KiB/s | 83.3 KiB | 00m00s [109/148] libattr-0:2.5.2-5.fc42.s390x 100% | 65.6 KiB/s | 17.0 KiB | 00m00s [110/148] pcre2-0:10.45-1.fc43.s390x 100% | 1.0 MiB/s | 278.5 KiB | 00m00s [111/148] pcre2-syntax-0:10.45-1.fc43.n 100% | 619.6 KiB/s | 161.7 KiB | 00m00s [112/148] libxml2-0:2.12.10-1.fc43.s390 100% | 2.6 MiB/s | 702.4 KiB | 00m00s [113/148] lz4-libs-0:1.10.0-2.fc42.s390 100% | 361.1 KiB/s | 95.0 KiB | 00m00s [114/148] openssl-libs-1:3.2.4-3.fc43.s 100% | 5.1 MiB/s | 2.0 MiB | 00m00s [115/148] gmp-1:6.3.0-3.fc43.s390x 100% | 1.2 MiB/s | 327.3 KiB | 00m00s [116/148] mpfr-0:4.2.2-1.fc43.s390x 100% | 1.1 MiB/s | 299.9 KiB | 00m00s [117/148] libstdc++-0:15.0.1-0.10.fc43. 100% | 3.6 MiB/s | 987.2 KiB | 00m00s [118/148] elfutils-default-yama-scope-0 100% | 35.7 KiB/s | 12.4 KiB | 00m00s [119/148] crypto-policies-0:20250305-1. 100% | 280.1 KiB/s | 72.6 KiB | 00m00s [120/148] json-c-0:0.18-2.fc42.s390x 100% | 168.1 KiB/s | 44.5 KiB | 00m00s [121/148] ca-certificates-0:2024.2.69_v 100% | 3.5 MiB/s | 945.0 KiB | 00m00s [122/148] libffi-0:3.4.7-2.fc43.s390x 100% | 145.2 KiB/s | 37.9 KiB | 00m00s [123/148] p11-kit-0:0.25.5-5.fc42.s390x 100% | 1.9 MiB/s | 516.0 KiB | 00m00s [124/148] p11-kit-trust-0:0.25.5-5.fc42 100% | 536.8 KiB/s | 141.2 KiB | 00m00s [125/148] fedora-release-0:43-0.7.noarc 100% | 56.7 KiB/s | 14.7 KiB | 00m00s [126/148] libtasn1-0:4.20.0-1.fc43.s390 100% | 295.1 KiB/s | 78.2 KiB | 00m00s [127/148] systemd-standalone-sysusers-0 100% | 596.4 KiB/s | 157.5 KiB | 00m00s [128/148] xxhash-libs-0:0.8.3-2.fc42.s3 100% | 139.9 KiB/s | 36.6 KiB | 00m00s [129/148] gdb-minimal-0:16.2-1.fc43.s39 100% | 11.5 MiB/s | 4.6 MiB | 00m00s [130/148] fedora-release-identity-basic 100% | 59.1 KiB/s | 15.5 KiB | 00m00s [131/148] libcurl-0:8.13.0~rc2-1.fc43.s 100% | 1.5 MiB/s | 396.3 KiB | 00m00s [132/148] libnghttp2-0:1.65.0-1.fc43.s3 100% | 286.7 KiB/s | 75.1 KiB | 00m00s [133/148] libssh-0:0.11.1-4.fc42.s390x 100% | 874.5 KiB/s | 229.1 KiB | 00m00s [134/148] libssh-config-0:0.11.1-4.fc42 100% | 34.8 KiB/s | 9.0 KiB | 00m00s [135/148] krb5-libs-0:1.21.3-5.fc42.s39 100% | 2.9 MiB/s | 775.4 KiB | 00m00s [136/148] libidn2-0:2.3.8-1.fc43.s390x 100% | 656.4 KiB/s | 171.3 KiB | 00m00s [137/148] openldap-0:2.6.9-3.fc42.s390x 100% | 993.9 KiB/s | 261.4 KiB | 00m00s [138/148] libbrotli-0:1.1.0-6.fc42.s390 100% | 1.4 MiB/s | 380.0 KiB | 00m00s [139/148] libpsl-0:0.21.5-5.fc42.s390x 100% | 243.4 KiB/s | 64.3 KiB | 00m00s [140/148] keyutils-libs-0:1.6.3-5.fc42. 100% | 119.3 KiB/s | 31.3 KiB | 00m00s [141/148] libcom_err-0:1.47.2-3.fc42.s3 100% | 103.4 KiB/s | 26.9 KiB | 00m00s [142/148] libverto-0:0.3.2-10.fc42.s390 100% | 79.0 KiB/s | 20.6 KiB | 00m00s [143/148] cyrus-sasl-lib-0:2.1.28-30.fc 100% | 3.0 MiB/s | 824.0 KiB | 00m00s [144/148] libevent-0:2.1.12-15.fc42.s39 100% | 990.0 KiB/s | 259.4 KiB | 00m00s [145/148] libtool-ltdl-0:2.5.4-4.fc42.s 100% | 139.6 KiB/s | 36.3 KiB | 00m00s [146/148] publicsuffix-list-dafsa-0:202 100% | 227.2 KiB/s | 58.8 KiB | 00m00s [147/148] libunistring-0:1.1-9.fc42.s39 100% | 2.1 MiB/s | 554.4 KiB | 00m00s [148/148] gdbm-libs-1:1.23-9.fc42.s390x 100% | 222.4 KiB/s | 57.8 KiB | 00m00s -------------------------------------------------------------------------------- [148/148] Total 100% | 3.2 MiB/s | 52.8 MiB | 00m17s Running transaction Importing OpenPGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. [ 1/150] Verify package files 100% | 758.0 B/s | 148.0 B | 00m00s [ 2/150] Prepare transaction 100% | 2.1 KiB/s | 148.0 B | 00m00s [ 3/150] Installing libgcc-0:15.0.1-0. 100% | 166.9 MiB/s | 170.9 KiB | 00m00s [ 4/150] Installing publicsuffix-list- 100% | 67.6 MiB/s | 69.2 KiB | 00m00s [ 5/150] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 6/150] Installing fedora-release-ide 100% | 0.0 B/s | 976.0 B | 00m00s [ 7/150] Installing fedora-repos-rawhi 100% | 2.4 MiB/s | 2.4 KiB | 00m00s [ 8/150] Installing fedora-gpg-keys-0: 100% | 28.4 MiB/s | 174.8 KiB | 00m00s [ 9/150] Installing fedora-repos-0:43- 100% | 5.6 MiB/s | 5.7 KiB | 00m00s [ 10/150] Installing fedora-release-com 100% | 24.0 MiB/s | 24.6 KiB | 00m00s [ 11/150] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/150] Installing setup-0:2.15.0-23. 100% | 44.6 MiB/s | 730.3 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 13/150] Installing filesystem-0:3.18- 100% | 2.3 MiB/s | 212.4 KiB | 00m00s [ 14/150] Installing pcre2-syntax-0:10. 100% | 135.0 MiB/s | 276.4 KiB | 00m00s [ 15/150] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [ 16/150] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [ 17/150] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [ 18/150] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [ 19/150] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [ 20/150] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [ 21/150] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [ 22/150] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [ 23/150] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 24/150] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [ 25/150] Installing ansible-srpm-macro 100% | 35.4 MiB/s | 36.2 KiB | 00m00s [ 26/150] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 740.0 B | 00m00s [ 27/150] Installing pkgconf-m4-0:2.3.0 100% | 14.5 MiB/s | 14.8 KiB | 00m00s [ 28/150] Installing ncurses-base-0:6.5 100% | 49.1 MiB/s | 352.2 KiB | 00m00s [ 29/150] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 30/150] Installing ncurses-libs-0:6.5 100% | 143.8 MiB/s | 1.0 MiB | 00m00s [ 31/150] Installing glibc-0:2.41.9000- 100% | 122.4 MiB/s | 5.1 MiB | 00m00s [ 32/150] Installing bash-0:5.2.37-3.fc 100% | 214.0 MiB/s | 8.3 MiB | 00m00s [ 33/150] Installing glibc-common-0:2.4 100% | 60.0 MiB/s | 1.1 MiB | 00m00s [ 34/150] Installing glibc-gconv-extra- 100% | 207.1 MiB/s | 6.8 MiB | 00m00s [ 35/150] Installing zlib-ng-compat-0:2 100% | 107.4 MiB/s | 109.9 KiB | 00m00s [ 36/150] Installing xz-libs-1:5.6.3-3. 100% | 214.0 MiB/s | 219.1 KiB | 00m00s [ 37/150] Installing bzip2-libs-0:1.0.8 100% | 87.4 MiB/s | 89.5 KiB | 00m00s [ 38/150] Installing libuuid-0:2.40.4-7 100% | 0.0 B/s | 34.2 KiB | 00m00s [ 39/150] Installing libblkid-0:2.40.4- 100% | 272.9 MiB/s | 279.4 KiB | 00m00s [ 40/150] Installing libxcrypt-0:4.4.38 100% | 142.0 MiB/s | 290.9 KiB | 00m00s [ 41/150] Installing readline-0:8.2-13. 100% | 265.0 MiB/s | 542.7 KiB | 00m00s [ 42/150] Installing libzstd-0:1.5.7-1. 100% | 214.1 MiB/s | 876.8 KiB | 00m00s [ 43/150] Installing elfutils-libelf-0: 100% | 294.4 MiB/s | 1.2 MiB | 00m00s [ 44/150] Installing popt-0:1.19-8.fc42 100% | 71.8 MiB/s | 147.1 KiB | 00m00s [ 45/150] Installing gmp-1:6.3.0-3.fc43 100% | 251.3 MiB/s | 772.0 KiB | 00m00s [ 46/150] Installing libstdc++-0:15.0.1 100% | 262.1 MiB/s | 3.1 MiB | 00m00s [ 47/150] Installing libattr-0:2.5.2-5. 100% | 0.0 B/s | 23.9 KiB | 00m00s [ 48/150] Installing libacl-0:2.3.2-3.f 100% | 0.0 B/s | 34.9 KiB | 00m00s [ 49/150] Installing mpfr-0:4.2.2-1.fc4 100% | 228.2 MiB/s | 701.2 KiB | 00m00s [ 50/150] Installing gawk-0:5.3.1-1.fc4 100% | 91.9 MiB/s | 1.7 MiB | 00m00s [ 51/150] Installing dwz-0:0.15-9.fc42. 100% | 23.4 MiB/s | 311.8 KiB | 00m00s [ 52/150] Installing unzip-0:6.0-66.fc4 100% | 29.8 MiB/s | 397.0 KiB | 00m00s [ 53/150] Installing file-libs-0:5.46-1 100% | 515.7 MiB/s | 11.9 MiB | 00m00s [ 54/150] Installing file-0:5.46-1.fc42 100% | 5.2 MiB/s | 101.5 KiB | 00m00s [ 55/150] Installing crypto-policies-0: 100% | 31.5 MiB/s | 161.4 KiB | 00m00s [ 56/150] Installing libsmartcols-0:2.4 100% | 180.9 MiB/s | 185.3 KiB | 00m00s [ 57/150] Installing libsepol-0:3.8-1.f 100% | 207.6 MiB/s | 850.5 KiB | 00m00s [ 58/150] Installing libeconf-0:0.7.6-1 100% | 64.5 MiB/s | 66.0 KiB | 00m00s [ 59/150] Installing libcap-ng-0:0.8.5- 100% | 60.8 MiB/s | 62.3 KiB | 00m00s [ 60/150] Installing audit-libs-0:4.0.3 100% | 178.2 MiB/s | 365.0 KiB | 00m00s [ 61/150] Installing pam-libs-0:1.7.0-4 100% | 121.5 MiB/s | 124.5 KiB | 00m00s [ 62/150] Installing libcap-0:2.73-2.fc 100% | 13.9 MiB/s | 214.0 KiB | 00m00s [ 63/150] Installing systemd-libs-0:257 100% | 226.8 MiB/s | 2.3 MiB | 00m00s [ 64/150] Installing lua-libs-0:5.4.7-3 100% | 155.2 MiB/s | 317.9 KiB | 00m00s [ 65/150] Installing alternatives-0:1.3 100% | 5.2 MiB/s | 63.5 KiB | 00m00s [ 66/150] Installing pcre2-0:10.45-1.fc 100% | 233.9 MiB/s | 718.4 KiB | 00m00s [ 67/150] Installing libselinux-0:3.8-1 100% | 201.4 MiB/s | 206.2 KiB | 00m00s [ 68/150] Installing grep-0:3.11-10.fc4 100% | 59.7 MiB/s | 1.0 MiB | 00m00s [ 69/150] Installing findutils-1:4.10.0 100% | 99.4 MiB/s | 1.9 MiB | 00m00s [ 70/150] Installing sed-0:4.9-4.fc42.s 100% | 53.3 MiB/s | 873.2 KiB | 00m00s [ 71/150] Installing xz-1:5.6.3-3.fc42. 100% | 68.5 MiB/s | 1.2 MiB | 00m00s [ 72/150] Installing libmount-0:2.40.4- 100% | 180.0 MiB/s | 368.6 KiB | 00m00s [ 73/150] Installing lz4-libs-0:1.10.0- 100% | 193.6 MiB/s | 198.3 KiB | 00m00s [ 74/150] Installing libffi-0:3.4.7-2.f 100% | 77.8 MiB/s | 79.6 KiB | 00m00s [ 75/150] Installing libtasn1-0:4.20.0- 100% | 181.6 MiB/s | 185.9 KiB | 00m00s [ 76/150] Installing p11-kit-0:0.25.5-5 100% | 103.8 MiB/s | 2.5 MiB | 00m00s [ 77/150] Installing libunistring-0:1.1 100% | 252.2 MiB/s | 1.8 MiB | 00m00s 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1.9 MiB | 00m00s [ 91/150] Installing add-determinism-0: 100% | 144.8 MiB/s | 3.5 MiB | 00m00s [ 92/150] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 93/150] Installing filesystem-srpm-ma 100% | 0.0 B/s | 38.9 KiB | 00m00s [ 94/150] Installing ed-0:1.21-2.fc42.s 100% | 11.2 MiB/s | 148.6 KiB | 00m00s [ 95/150] Installing patch-0:2.7.6-26.f 100% | 21.9 MiB/s | 291.7 KiB | 00m00s [ 96/150] Installing elfutils-default-y 100% | 340.5 KiB/s | 2.0 KiB | 00m00s [ 97/150] Installing elfutils-libs-0:0. 100% | 185.6 MiB/s | 760.0 KiB | 00m00s [ 98/150] Installing cpio-0:2.15-2.fc41 100% | 62.2 MiB/s | 1.1 MiB | 00m00s [ 99/150] Installing diffutils-0:3.10-9 100% | 89.1 MiB/s | 1.6 MiB | 00m00s [100/150] Installing sqlite-libs-0:3.49 100% | 238.4 MiB/s | 1.7 MiB | 00m00s [101/150] Installing libgomp-0:15.0.1-0 100% | 264.1 MiB/s | 540.9 KiB | 00m00s [102/150] Installing jansson-0:2.14-2.f 100% | 88.1 MiB/s | 90.2 KiB | 00m00s [103/150] Installing libpkgconf-0:2.3.0 100% | 80.9 MiB/s | 82.9 KiB | 00m00s [104/150] Installing pkgconf-0:2.3.0-2. 100% | 7.4 MiB/s | 90.7 KiB | 00m00s [105/150] Installing pkgconf-pkg-config 100% | 147.8 KiB/s | 1.8 KiB | 00m00s [106/150] Installing json-c-0:0.18-2.fc 100% | 81.7 MiB/s | 83.6 KiB | 00m00s [107/150] Installing xxhash-libs-0:0.8. 100% | 65.5 MiB/s | 67.1 KiB | 00m00s [108/150] Installing libnghttp2-0:1.65. 100% | 162.9 MiB/s | 166.8 KiB | 00m00s [109/150] Installing libbrotli-0:1.1.0- 100% | 222.4 MiB/s | 911.0 KiB | 00m00s [110/150] Installing keyutils-libs-0:1. 100% | 0.0 B/s | 51.5 KiB | 00m00s [111/150] Installing libcom_err-0:1.47. 100% | 0.0 B/s | 60.0 KiB | 00m00s [112/150] Installing libverto-0:0.3.2-1 100% | 0.0 B/s | 26.9 KiB | 00m00s [113/150] Installing libtool-ltdl-0:2.5 100% | 0.0 B/s | 70.9 KiB | 00m00s [114/150] Installing gdbm-libs-1:1.23-9 100% | 124.1 MiB/s | 127.1 KiB | 00m00s [115/150] Installing cyrus-sasl-lib-0:2 100% | 112.7 MiB/s | 2.4 MiB | 00m00s [116/150] Installing coreutils-common-0 100% | 301.5 MiB/s | 11.2 MiB | 00m00s [117/150] Installing openssl-libs-1:3.2 100% | 265.1 MiB/s | 6.1 MiB | 00m00s [118/150] Installing coreutils-0:9.6-2. 100% | 147.7 MiB/s | 5.8 MiB | 00m00s [119/150] Installing ca-certificates-0: 100% | 1.4 MiB/s | 2.4 MiB | 00m02s [120/150] Installing libarchive-0:3.7.7 100% | 198.5 MiB/s | 1.0 MiB | 00m00s [121/150] Installing krb5-libs-0:1.21.3 100% | 219.0 MiB/s | 2.4 MiB | 00m00s [122/150] Installing libssh-0:0.11.1-4. 100% | 189.9 MiB/s | 583.3 KiB | 00m00s [123/150] Installing gzip-0:1.13-3.fc42 100% | 26.2 MiB/s | 402.1 KiB | 00m00s [124/150] Installing rpm-sequoia-0:1.7. 100% | 263.3 MiB/s | 3.2 MiB | 00m00s [125/150] Installing rpm-libs-0:4.20.1- 100% | 197.0 MiB/s | 806.9 KiB | 00m00s [126/150] Installing rpm-build-libs-0:4 100% | 210.1 MiB/s | 215.1 KiB | 00m00s [127/150] Installing libevent-0:2.1.12- 100% | 224.1 MiB/s | 917.8 KiB | 00m00s [128/150] Installing openldap-0:2.6.9-3 100% | 164.2 MiB/s | 672.5 KiB | 00m00s [129/150] Installing libcurl-0:8.13.0~r 100% | 220.6 MiB/s | 903.4 KiB | 00m00s [130/150] Installing elfutils-debuginfo 100% | 5.9 MiB/s | 78.0 KiB | 00m00s [131/150] Installing elfutils-0:0.192-9 100% | 129.4 MiB/s | 3.0 MiB | 00m00s [132/150] Installing binutils-0:2.44-3. 100% | 253.3 MiB/s | 27.4 MiB | 00m00s [133/150] Installing gdb-minimal-0:16.2 100% | 227.4 MiB/s | 15.2 MiB | 00m00s [134/150] Installing debugedit-0:5.1-5. 100% | 13.9 MiB/s | 198.9 KiB | 00m00s [135/150] Installing curl-0:8.13.0~rc2- 100% | 21.8 MiB/s | 491.3 KiB | 00m00s [136/150] Installing rpm-0:4.20.1-1.fc4 100% | 85.8 MiB/s | 2.5 MiB | 00m00s [137/150] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.1 KiB | 00m00s [138/150] Installing tree-sitter-srpm-m 100% | 0.0 B/s | 7.9 KiB | 00m00s [139/150] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [140/150] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [141/150] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.3 KiB | 00m00s [142/150] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [143/150] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [144/150] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [145/150] Installing redhat-rpm-config- 100% | 94.5 MiB/s | 193.5 KiB | 00m00s [146/150] Installing rpm-build-0:4.20.1 100% | 11.2 MiB/s | 171.6 KiB | 00m00s [147/150] Installing pyproject-srpm-mac 100% | 2.4 MiB/s | 2.5 KiB | 00m00s [148/150] Installing util-linux-0:2.40. 100% | 86.7 MiB/s | 3.3 MiB | 00m00s [149/150] Installing which-0:2.23-1.fc4 100% | 6.4 MiB/s | 85.3 KiB | 00m00s [150/150] Installing info-0:7.2-3.fc42. 100% | 221.4 KiB/s | 397.4 KiB | 00m02s Warning: skipped OpenPGP checks for 143 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.6.0-1.fc43.s390x alternatives-1.32-1.fc43.s390x ansible-srpm-macros-1-17.1.fc42.noarch audit-libs-4.0.3-2.fc42.s390x bash-5.2.37-3.fc43.s390x binutils-2.44-3.fc43.s390x build-reproducibility-srpm-macros-0.6.0-1.fc43.noarch bzip2-1.0.8-20.fc42.s390x bzip2-libs-1.0.8-20.fc42.s390x ca-certificates-2024.2.69_v8.0.401-5.fc42.noarch coreutils-9.6-2.fc43.s390x coreutils-common-9.6-2.fc43.s390x cpio-2.15-2.fc41.s390x crypto-policies-20250305-1.gita35b0fa.fc43.noarch curl-8.13.0~rc2-1.fc43.s390x cyrus-sasl-lib-2.1.28-30.fc42.s390x debugedit-5.1-5.fc43.s390x diffutils-3.10-9.fc42.s390x dwz-0.15-9.fc42.s390x ed-1.21-2.fc42.s390x efi-srpm-macros-6-3.fc43.noarch elfutils-0.192-9.fc41.s390x elfutils-debuginfod-client-0.192-9.fc41.s390x elfutils-default-yama-scope-0.192-9.fc41.noarch elfutils-libelf-0.192-9.fc41.s390x elfutils-libs-0.192-9.fc41.s390x fedora-gpg-keys-43-0.1.noarch fedora-release-43-0.7.noarch fedora-release-common-43-0.7.noarch fedora-release-identity-basic-43-0.7.noarch fedora-repos-43-0.1.noarch fedora-repos-rawhide-43-0.1.noarch file-5.46-1.fc42.s390x file-libs-5.46-1.fc42.s390x filesystem-3.18-38.fc43.s390x filesystem-srpm-macros-3.18-38.fc43.noarch findutils-4.10.0-5.fc42.s390x fonts-srpm-macros-2.0.5-21.fc42.noarch forge-srpm-macros-0.4.0-2.fc42.noarch fpc-srpm-macros-1.3-14.fc42.noarch gawk-5.3.1-1.fc42.s390x gdb-minimal-16.2-1.fc43.s390x gdbm-libs-1.23-9.fc42.s390x ghc-srpm-macros-1.9.2-2.fc42.noarch glibc-2.41.9000-2.fc43.s390x glibc-common-2.41.9000-2.fc43.s390x glibc-gconv-extra-2.41.9000-2.fc43.s390x glibc-minimal-langpack-2.41.9000-2.fc43.s390x gmp-6.3.0-3.fc43.s390x gnat-srpm-macros-6-7.fc42.noarch go-srpm-macros-3.6.0-6.fc42.noarch gpg-pubkey-e99d6ad1-64d2612c grep-3.11-10.fc42.s390x gzip-1.13-3.fc42.s390x info-7.2-3.fc42.s390x jansson-2.14-2.fc42.s390x json-c-0.18-2.fc42.s390x kernel-srpm-macros-1.0-25.fc42.noarch keyutils-libs-1.6.3-5.fc42.s390x krb5-libs-1.21.3-5.fc42.s390x libacl-2.3.2-3.fc42.s390x libarchive-3.7.7-4.fc43.s390x libattr-2.5.2-5.fc42.s390x libblkid-2.40.4-7.fc43.s390x libbrotli-1.1.0-6.fc42.s390x libcap-2.73-2.fc42.s390x libcap-ng-0.8.5-4.fc42.s390x libcom_err-1.47.2-3.fc42.s390x libcurl-8.13.0~rc2-1.fc43.s390x libeconf-0.7.6-1.fc43.s390x libevent-2.1.12-15.fc42.s390x libfdisk-2.40.4-7.fc43.s390x libffi-3.4.7-2.fc43.s390x libgcc-15.0.1-0.10.fc43.s390x libgomp-15.0.1-0.10.fc43.s390x libidn2-2.3.8-1.fc43.s390x libmount-2.40.4-7.fc43.s390x libnghttp2-1.65.0-1.fc43.s390x libpkgconf-2.3.0-2.fc42.s390x libpsl-0.21.5-5.fc42.s390x libselinux-3.8-1.fc42.s390x libsemanage-3.8-1.fc42.s390x libsepol-3.8-1.fc42.s390x libsmartcols-2.40.4-7.fc43.s390x libssh-0.11.1-4.fc42.s390x libssh-config-0.11.1-4.fc42.noarch libstdc++-15.0.1-0.10.fc43.s390x libtasn1-4.20.0-1.fc43.s390x libtool-ltdl-2.5.4-4.fc42.s390x libunistring-1.1-9.fc42.s390x libuuid-2.40.4-7.fc43.s390x libverto-0.3.2-10.fc42.s390x libxcrypt-4.4.38-6.fc43.s390x libxml2-2.12.10-1.fc43.s390x libzstd-1.5.7-1.fc43.s390x lua-libs-5.4.7-3.fc43.s390x lua-srpm-macros-1-15.fc42.noarch lz4-libs-1.10.0-2.fc42.s390x mpfr-4.2.2-1.fc43.s390x ncurses-base-6.5-5.20250125.fc42.noarch ncurses-libs-6.5-5.20250125.fc42.s390x ocaml-srpm-macros-10-4.fc42.noarch openblas-srpm-macros-2-19.fc42.noarch openldap-2.6.9-3.fc42.s390x openssl-libs-3.2.4-3.fc43.s390x p11-kit-0.25.5-5.fc42.s390x p11-kit-trust-0.25.5-5.fc42.s390x package-notes-srpm-macros-0.5-13.fc42.noarch pam-libs-1.7.0-4.fc42.s390x patch-2.7.6-26.fc42.s390x pcre2-10.45-1.fc43.s390x pcre2-syntax-10.45-1.fc43.noarch perl-srpm-macros-1-57.fc42.noarch pkgconf-2.3.0-2.fc42.s390x pkgconf-m4-2.3.0-2.fc42.noarch pkgconf-pkg-config-2.3.0-2.fc42.s390x popt-1.19-8.fc42.s390x publicsuffix-list-dafsa-20250116-1.fc42.noarch pyproject-srpm-macros-1.18.1-1.fc43.noarch python-srpm-macros-3.13-4.fc42.noarch qt5-srpm-macros-5.15.16-1.fc43.noarch qt6-srpm-macros-6.8.2-2.fc43.noarch readline-8.2-13.fc43.s390x redhat-rpm-config-342-2.fc42.noarch rpm-4.20.1-1.fc43.s390x rpm-build-4.20.1-1.fc43.s390x rpm-build-libs-4.20.1-1.fc43.s390x rpm-libs-4.20.1-1.fc43.s390x rpm-sequoia-1.7.0-5.fc43.s390x rust-srpm-macros-26.3-4.fc42.noarch sed-4.9-4.fc42.s390x setup-2.15.0-23.fc43.noarch shadow-utils-4.17.4-1.fc43.s390x sqlite-libs-3.49.0-1.fc43.s390x systemd-libs-257.4-3.fc43.s390x systemd-standalone-sysusers-257.4-3.fc43.s390x tar-1.35-5.fc42.s390x tree-sitter-srpm-macros-0.2.0-1.fc43.noarch unzip-6.0-66.fc42.s390x util-linux-2.40.4-7.fc43.s390x util-linux-core-2.40.4-7.fc43.s390x which-2.23-1.fc42.s390x xxhash-libs-0.8.3-2.fc42.s390x xz-5.6.3-3.fc42.s390x xz-libs-5.6.3-3.fc42.s390x zig-srpm-macros-1-4.fc42.noarch zip-3.0-43.fc42.s390x zlib-ng-compat-2.2.4-2.fc43.s390x zstd-1.5.7-1.fc43.s390x Start: buildsrpm Start: rpmbuild -bs Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1742515200 Wrote: /builddir/build/SRPMS/snakemake-8.30.0-1.fc43.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-s390x-1742578099.344400/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-6_utotv4/snakemake/snakemake.spec) Config(child) 0 minutes 53 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/snakemake-8.30.0-1.fc43.src.rpm) Config(fedora-41-s390x) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-s390x-bootstrap-1742578099.344400/root. INFO: reusing tmpfs at /var/lib/mock/fedora-41-s390x-bootstrap-1742578099.344400/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-s390x-1742578099.344400/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.1-1.fc41.s390x rpm-sequoia-1.7.0-5.fc41.s390x dnf5-5.2.12.0-1.fc41.s390x dnf5-plugins-5.2.12.0-1.fc41.s390x Finish: chroot init Start: build phase for snakemake-8.30.0-1.fc43.src.rpm Start: build setup for snakemake-8.30.0-1.fc43.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1742515200 Wrote: /builddir/build/SRPMS/snakemake-8.30.0-1.fc43.src.rpm Updating and loading repositories: updates 100% | 15.6 KiB/s | 6.5 KiB | 00m00s fedora 100% | 13.5 KiB/s | 5.5 KiB | 00m00s Copr repository 100% | 3.2 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 5.8 KiB/s | 3.8 KiB | 00m01s Repositories loaded. Package Arch Version Repository Size Installing: R-core s390x 4.4.3-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 104.1 MiB environment-modules s390x 5.5.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB graphviz s390x 12.2.1-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21.0 MiB help2man noarch 1.49.3-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 415.6 KiB python-unversioned-command noarch 3.13.2-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 23.0 B python3-boto3 noarch 1.37.17-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 MiB python3-devel s390x 3.13.2-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB python3-flask noarch 1:3.1.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 872.9 KiB python3-google-cloud-storage noarch 2.14.0-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB python3-pandas s390x 2.2.3-1.fc42~bootstrap http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.9 MiB python3-pytest noarch 8.3.5-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21.0 MiB python3-pytest-mock noarch 3.14.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 114.9 KiB python3-snakemake-executor-plugin-cluster-generic noarch 1.0.9-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39.5 KiB python3-snakemake-storage-plugin-fs noarch 1.0.6-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 30.7 KiB python3-snakemake-storage-plugin-http noarch 0.2.3-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 28.0 KiB python3-snakemake-storage-plugin-s3 noarch 0.3.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.2 KiB singularity-ce s390x 4.3.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 216.6 MiB strace s390x 6.13-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.9 MiB stress-ng s390x 0.18.11-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.9 MiB vim-filesystem noarch 2:9.1.1227-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.0 B Installing dependencies: Judy s390x 1.0.5-38.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 405.5 KiB abattis-cantarell-vf-fonts noarch 0.301-14.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.7 KiB abseil-cpp s390x 20250127.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB adobe-mappings-cmap noarch 20231115-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 15.2 MiB adobe-mappings-cmap-deprecated noarch 20231115-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 582.1 KiB adobe-mappings-pdf noarch 20190401-9.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.4 MiB authselect s390x 1.5.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 153.6 KiB authselect-libs s390x 1.5.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 826.3 KiB avahi-libs s390x 0.9~rc2-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 165.5 KiB c-ares s390x 1.34.4-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 285.5 KiB cairo s390x 1.18.2-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB cairo-gobject s390x 1.18.2-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 34.9 KiB conmon s390x 2:2.1.13-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 170.0 KiB cracklib s390x 2.9.11-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 229.5 KiB crun s390x 1.20-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 533.9 KiB 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20200910-24.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 84.3 KiB urw-base35-fonts noarch 20200910-24.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.3 KiB urw-base35-fonts-common noarch 20200910-24.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37.4 KiB urw-base35-gothic-fonts noarch 20200910-24.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB urw-base35-nimbus-mono-ps-fonts noarch 20200910-24.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB urw-base35-nimbus-roman-fonts noarch 20200910-24.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB urw-base35-nimbus-sans-fonts noarch 20200910-24.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB urw-base35-p052-fonts noarch 20200910-24.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB urw-base35-standard-symbols-ps-fonts noarch 20200910-24.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 64.9 KiB urw-base35-z003-fonts noarch 20200910-24.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 390.8 KiB xdg-utils noarch 1.2.1-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 346.3 KiB xml-common noarch 0.6.3-66.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.4 KiB yajl s390x 2.1.0-25.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81.5 KiB Transaction Summary: Installing: 300 packages Total size of inbound packages is 262 MiB. Need to download 262 MiB. After this operation, 960 MiB extra will be used (install 960 MiB, remove 0 B). [ 1/300] environment-modules-0:5.5.0-3 100% | 575.2 KiB/s | 755.3 KiB | 00m01s [ 2/300] help2man-0:1.49.3-7.fc42.noar 100% | 832.8 KiB/s | 216.5 KiB | 00m00s [ 3/300] graphviz-0:12.2.1-3.fc42.s390 100% | 2.8 MiB/s | 4.8 MiB | 00m02s [ 4/300] python-unversioned-command-0: 100% | 44.7 KiB/s | 11.7 KiB | 00m00s [ 5/300] python3-devel-0:3.13.2-2.fc43 100% | 1.3 MiB/s | 358.8 KiB | 00m00s [ 6/300] python3-boto3-0:1.37.17-1.fc4 100% | 1.5 MiB/s | 398.5 KiB | 00m00s [ 7/300] python3-flask-1:3.1.0-3.fc42. 100% | 777.9 KiB/s | 204.6 KiB | 00m00s [ 8/300] python3-google-cloud-storage- 100% | 757.5 KiB/s | 200.0 KiB | 00m00s [ 9/300] python3-pytest-mock-0:3.14.0- 100% | 142.8 KiB/s | 37.4 KiB | 00m00s [ 10/300] python3-pandas-0:2.2.3-1.fc42 100% | 14.9 MiB/s | 8.1 MiB | 00m01s [ 11/300] python3-snakemake-executor-pl 100% | 91.6 KiB/s | 23.9 KiB | 00m00s [ 12/300] python3-snakemake-storage-plu 100% | 80.9 KiB/s | 21.2 KiB | 00m00s [ 13/300] python3-snakemake-storage-plu 100% | 80.9 KiB/s | 21.1 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perl-Pod-Usage-4:2.03-512.fc4 100% | 153.9 KiB/s | 40.0 KiB | 00m00s [206/300] perl-File-Basename-0:2.86-515 100% | 65.5 KiB/s | 17.2 KiB | 00m00s [207/300] perl-Getopt-Std-0:1.14-515.fc 100% | 60.6 KiB/s | 15.7 KiB | 00m00s [208/300] perl-vars-0:1.05-515.fc42.noa 100% | 50.2 KiB/s | 13.0 KiB | 00m00s [209/300] perl-MIME-Base64-0:3.16-512.f 100% | 114.8 KiB/s | 30.2 KiB | 00m00s [210/300] perl-Storable-1:3.32-512.fc42 100% | 380.9 KiB/s | 99.4 KiB | 00m00s [211/300] perl-parent-1:0.244-2.fc42.no 100% | 58.1 KiB/s | 15.2 KiB | 00m00s [212/300] fribidi-0:1.0.16-2.fc42.s390x 100% | 215.2 KiB/s | 56.2 KiB | 00m00s [213/300] nss-util-0:3.109.0-1.fc43.s39 100% | 354.5 KiB/s | 92.2 KiB | 00m00s [214/300] libthai-0:0.1.29-10.fc42.s390 100% | 802.7 KiB/s | 212.7 KiB | 00m00s [215/300] nss-softokn-0:3.109.0-1.fc43. 100% | 1.6 MiB/s | 431.8 KiB | 00m00s [216/300] nss-softokn-freebl-0:3.109.0- 100% | 1.2 MiB/s | 325.9 KiB | 00m00s [217/300] groff-base-0:1.23.0-8.fc42.s3 100% | 4.2 MiB/s | 1.1 MiB | 00m00s [218/300] libpipeline-0:1.5.8-2.fc42.s3 100% | 229.5 KiB/s | 61.0 KiB | 00m00s [219/300] libXau-0:1.0.12-2.fc42.s390x 100% | 123.0 KiB/s | 33.3 KiB | 00m00s [220/300] jbigkit-libs-0:2.1-31.fc42.s3 100% | 209.9 KiB/s | 55.6 KiB | 00m00s [221/300] liblerc-0:4.0.0-8.fc42.s390x 100% | 430.8 KiB/s | 114.2 KiB | 00m00s [222/300] libdatrie-0:0.2.13-11.fc42.s3 100% | 124.9 KiB/s | 33.0 KiB | 00m00s [223/300] cracklib-0:2.9.11-7.fc42.s390 100% | 314.6 KiB/s | 83.1 KiB | 00m00s [224/300] adobe-mappings-cmap-0:2023111 100% | 8.1 MiB/s | 2.2 MiB | 00m00s [225/300] adobe-mappings-cmap-deprecate 100% | 420.2 KiB/s | 110.5 KiB | 00m00s [226/300] cups-libs-1:2.4.11-13.fc43.s3 100% | 1.0 MiB/s | 278.2 KiB | 00m00s [227/300] cups-filesystem-1:2.4.11-13.f 100% | 52.3 KiB/s | 13.6 KiB | 00m00s [228/300] adobe-mappings-pdf-0:20190401 100% | 2.3 MiB/s | 616.8 KiB | 00m00s [229/300] jbig2dec-libs-0:0.20-6.fc42.s 100% | 293.1 KiB/s | 76.8 KiB | 00m00s [230/300] google-droid-sans-fonts-0:202 100% | 6.8 MiB/s | 2.7 MiB | 00m00s [231/300] libijs-0:0.35-24.fc42.s390x 100% | 110.3 KiB/s | 29.2 KiB | 00m00s [232/300] libpaper-1:2.1.1-8.fc42.s390x 100% | 102.8 KiB/s | 26.8 KiB | 00m00s [233/300] libaom-0:3.12.0-1.fc43.s390x 100% | 3.6 MiB/s | 1.4 MiB | 00m00s [234/300] libdav1d-0:1.5.1-1.fc42.s390x 100% | 1.2 MiB/s | 321.0 KiB | 00m00s [235/300] svt-av1-libs-0:2.3.0-1.fc43.s 100% | 3.9 MiB/s | 1.1 MiB | 00m00s [236/300] libyuv-0:0-0.56.20240704git96 100% | 545.4 KiB/s | 143.4 KiB | 00m00s [237/300] rav1e-libs-0:0.7.1-5.fc42.s39 100% | 3.3 MiB/s | 898.2 KiB | 00m00s [238/300] libICE-0:1.1.2-2.fc42.s390x 100% | 305.9 KiB/s | 80.2 KiB | 00m00s [239/300] graphite2-0:1.3.14-18.fc42.s3 100% | 590.5 KiB/s | 100.4 KiB | 00m00s [240/300] libSM-0:1.2.5-2.fc42.s390x 100% | 174.7 KiB/s | 45.8 KiB | 00m00s [241/300] netpbm-0:11.09.00-2.fc43.s390 100% | 744.5 KiB/s | 194.3 KiB | 00m00s [242/300] libassuan-0:2.5.7-3.fc42.s390 100% | 257.4 KiB/s | 67.2 KiB | 00m00s [243/300] libgpg-error-0:1.51-2.fc42.s3 100% | 886.1 KiB/s | 233.9 KiB | 00m00s [244/300] gnupg2-0:2.4.7-2.fc42.s390x 100% | 7.0 MiB/s | 2.8 MiB | 00m00s [245/300] libgcrypt-0:1.11.0-5.fc42.s39 100% | 2.0 MiB/s | 554.1 KiB | 00m00s [246/300] libksba-0:1.6.7-3.fc42.s390x 100% | 615.7 KiB/s | 163.2 KiB | 00m00s [247/300] npth-0:1.8-2.fc42.s390x 100% | 95.6 KiB/s | 25.1 KiB | 00m00s [248/300] tpm2-tss-0:4.1.3-6.fc42.s390x 100% | 1.6 MiB/s | 419.6 KiB | 00m00s [249/300] systemd-pam-0:257.4-3.fc43.s3 100% | 1.5 MiB/s | 414.3 KiB | 00m00s [250/300] systemd-0:257.4-3.fc43.s390x 100% | 9.7 MiB/s | 3.9 MiB | 00m00s [251/300] emacs-filesystem-1:30.0-4.fc4 100% | 27.9 KiB/s | 7.4 KiB | 00m00s [252/300] avahi-libs-0:0.9~rc2-3.fc43.s 100% | 255.3 KiB/s | 66.9 KiB | 00m00s [253/300] systemd-shared-0:257.4-3.fc43 100% | 3.3 MiB/s | 1.7 MiB | 00m01s [254/300] dbus-libs-1:1.16.0-3.fc42.s39 100% | 566.9 KiB/s | 149.1 KiB | 00m00s [255/300] libusb1-0:1.0.27-9.fc43.s390x 100% | 288.7 KiB/s | 75.6 KiB | 00m00s [256/300] dbus-1:1.16.0-3.fc42.s390x 100% | 29.5 KiB/s | 7.7 KiB | 00m00s [257/300] perl-mro-0:1.29-515.fc42.s390 100% | 112.7 KiB/s | 29.6 KiB | 00m00s [258/300] perl-overloading-0:0.02-515.f 100% | 49.5 KiB/s | 12.9 KiB | 00m00s [259/300] perl-IO-0:1.55-515.fc42.s390x 100% | 296.1 KiB/s | 77.3 KiB | 00m00s [260/300] perl-Pod-Perldoc-0:3.28.01-51 100% | 307.2 KiB/s | 80.2 KiB | 00m00s [261/300] perl-podlators-1:6.0.2-3.fc42 100% | 480.9 KiB/s | 124.6 KiB | 00m00s [262/300] perl-HTTP-Tiny-0:0.090-2.fc42 100% | 217.4 KiB/s | 56.5 KiB | 00m00s [263/300] perl-IPC-Open3-0:1.22-515.fc4 100% | 84.3 KiB/s | 21.8 KiB | 00m00s [264/300] perl-Symbol-0:1.09-515.fc42.n 100% | 55.1 KiB/s | 14.2 KiB | 00m00s [265/300] perl-File-Temp-1:0.231.100-51 100% | 229.3 KiB/s | 59.2 KiB | 00m00s [266/300] perl-Pod-Simple-1:3.45-512.fc 100% | 803.0 KiB/s | 209.6 KiB | 00m00s [267/300] perl-File-stat-0:1.14-515.fc4 100% | 66.1 KiB/s | 17.1 KiB | 00m00s [268/300] perl-SelectSaver-0:1.02-515.f 100% | 45.4 KiB/s | 11.7 KiB | 00m00s [269/300] perl-Socket-4:2.038-512.fc42. 100% | 211.1 KiB/s | 55.1 KiB | 00m00s [270/300] perl-IO-Socket-SSL-0:2.089-2. 100% | 885.5 KiB/s | 230.2 KiB | 00m00s [271/300] perl-Net-SSLeay-0:1.94-8.fc42 100% | 1.4 MiB/s | 370.0 KiB | 00m00s [272/300] perl-Time-Local-2:1.350-512.f 100% | 132.5 KiB/s | 34.5 KiB | 00m00s [273/300] perl-Class-Struct-0:0.68-515. 100% | 85.5 KiB/s | 22.1 KiB | 00m00s [274/300] perl-File-Path-0:2.18-512.fc4 100% | 136.3 KiB/s | 35.2 KiB | 00m00s [275/300] dbus-broker-0:36-7.fc43.s390x 100% | 648.6 KiB/s | 170.6 KiB | 00m00s [276/300] perl-Term-ANSIColor-0:5.01-51 100% | 184.9 KiB/s | 47.7 KiB | 00m00s [277/300] perl-Term-Cap-0:1.18-512.fc42 100% | 85.2 KiB/s | 22.2 KiB | 00m00s [278/300] ncurses-0:6.5-5.20250125.fc42 100% | 1.6 MiB/s | 427.2 KiB | 00m00s [279/300] perl-if-0:0.61.000-515.fc42.n 100% | 54.1 KiB/s | 14.0 KiB | 00m00s [280/300] perl-Pod-Escapes-1:1.07-512.f 100% | 76.8 KiB/s | 19.8 KiB | 00m00s [281/300] perl-AutoLoader-0:5.74-515.fc 100% | 81.7 KiB/s | 21.2 KiB | 00m00s [282/300] perl-IO-Socket-IP-0:0.43-2.fc 100% | 162.9 KiB/s | 42.4 KiB | 00m00s [283/300] perl-URI-0:5.31-2.fc42.noarch 100% | 483.2 KiB/s | 127.1 KiB | 00m00s [284/300] dbus-common-1:1.16.0-3.fc42.n 100% | 55.4 KiB/s | 14.5 KiB | 00m00s [285/300] perl-Data-Dumper-0:2.189-513. 100% | 221.3 KiB/s | 57.8 KiB | 00m00s [286/300] perl-MIME-Base32-0:1.303-23.f 100% | 79.5 KiB/s | 20.5 KiB | 00m00s [287/300] perl-libnet-0:3.15-513.fc42.n 100% | 472.7 KiB/s | 122.9 KiB | 00m00s [288/300] perl-B-0:1.89-515.fc42.s390x 100% | 686.6 KiB/s | 179.2 KiB | 00m00s [289/300] perl-FileHandle-0:2.05-515.fc 100% | 59.6 KiB/s | 15.5 KiB | 00m00s [290/300] perl-Digest-MD5-0:2.59-6.fc42 100% | 134.1 KiB/s | 35.4 KiB | 00m00s [291/300] perl-Digest-0:1.20-512.fc42.n 100% | 96.6 KiB/s | 24.9 KiB | 00m00s [292/300] systemd-rpm-macros-0:257.4-3. 100% | 133.9 KiB/s | 34.7 KiB | 00m00s [293/300] pyproject-rpm-macros-0:1.18.1 100% | 170.0 KiB/s | 44.9 KiB | 00m00s [294/300] python-rpm-macros-0:3.13-4.fc 100% | 65.1 KiB/s | 16.9 KiB | 00m00s [295/300] python3-rpm-macros-0:3.13-4.f 100% | 44.3 KiB/s | 11.7 KiB | 00m00s [296/300] pam-0:1.7.0-4.fc42.s390x 100% | 1.9 MiB/s | 525.1 KiB | 00m00s [297/300] gdbm-1:1.23-9.fc42.s390x 100% | 561.4 KiB/s | 149.3 KiB | 00m00s [298/300] authselect-libs-0:1.5.1-1.fc4 100% | 759.0 KiB/s | 203.4 KiB | 00m00s [299/300] authselect-0:1.5.1-1.fc43.s39 100% | 532.1 KiB/s | 141.0 KiB | 00m00s [300/300] python3-rpm-generators-0:14-1 100% | 111.0 KiB/s | 29.2 KiB | 00m00s -------------------------------------------------------------------------------- [300/300] Total 100% | 8.5 MiB/s | 262.2 MiB | 00m31s Running transaction [ 1/302] Verify package files 100% | 348.0 B/s | 300.0 B | 00m01s [ 2/302] Prepare transaction 100% | 1.3 KiB/s | 300.0 B | 00m00s [ 3/302] Installing libpng-2:1.6.47-1. 100% | 122.5 MiB/s | 250.8 KiB | 00m00s [ 4/302] Installing libjpeg-turbo-0:3. 100% | 252.5 MiB/s | 775.6 KiB | 00m00s [ 5/302] Installing nspr-0:4.36.0-5.fc 100% | 172.3 MiB/s | 352.8 KiB | 00m00s [ 6/302] Installing libgpg-error-0:1.5 100% | 51.9 MiB/s | 903.5 KiB | 00m00s [ 7/302] Installing fonts-filesystem-1 100% | 0.0 B/s | 788.0 B | 00m00s [ 8/302] Installing urw-base35-fonts-c 100% | 0.0 B/s | 38.4 KiB | 00m00s [ 9/302] Installing libseccomp-0:2.5.5 100% | 182.6 MiB/s | 187.0 KiB | 00m00s [ 10/302] Installing nss-util-0:3.109.0 100% | 236.0 MiB/s | 241.6 KiB | 00m00s [ 11/302] Installing expat-0:2.7.0-1.fc 100% | 23.6 MiB/s | 314.3 KiB | 00m00s [ 12/302] Installing libassuan-0:2.5.7- 100% | 161.5 MiB/s | 165.4 KiB | 00m00s [ 13/302] Installing python-rpm-macros- 100% | 0.0 B/s | 22.8 KiB | 00m00s [ 14/302] Installing less-0:668-2.fc42. 100% | 30.7 MiB/s | 440.4 KiB | 00m00s [ 15/302] Installing libwebp-0:1.5.0-2. 100% | 117.7 MiB/s | 723.2 KiB | 00m00s [ 16/302] Installing tzdata-0:2025a-1.f 100% | 52.3 MiB/s | 1.9 MiB | 00m00s [ 17/302] Installing python3-rpm-macros 100% | 0.0 B/s | 6.7 KiB | 00m00s [ 18/302] Installing libICE-0:1.1.2-2.f 100% | 198.7 MiB/s | 203.5 KiB | 00m00s [ 19/302] Installing adobe-mappings-cma 100% | 226.7 MiB/s | 15.2 MiB | 00m00s [ 20/302] Installing groff-base-0:1.23. 100% | 109.9 MiB/s | 4.3 MiB | 00m00s [ 21/302] Installing lcms2-0:2.16-5.fc4 100% | 147.9 MiB/s | 454.2 KiB | 00m00s [ 22/302] Installing openjpeg-0:2.5.3-6 100% | 237.1 MiB/s | 485.6 KiB | 00m00s [ 23/302] Installing fuse-libs-0:2.9.9- 100% | 147.6 MiB/s | 302.2 KiB | 00m00s [ 24/302] Installing libtirpc-0:1.3.6-1 100% | 103.6 MiB/s | 212.2 KiB | 00m00s [ 25/302] Installing tcl8-1:8.6.15-10.f 100% | 126.8 MiB/s | 4.4 MiB | 00m00s [ 26/302] Installing libgfortran-0:15.0 100% | 272.3 MiB/s | 2.5 MiB | 00m00s [ 27/302] Installing fuse-common-0:3.16 100% | 285.2 KiB/s | 292.0 B | 00m00s [ 28/302] Installing abseil-cpp-0:20250 100% | 132.2 MiB/s | 2.2 MiB | 00m00s [ 29/302] Installing libicu-0:76.1-4.fc 100% | 265.8 MiB/s | 36.7 MiB | 00m00s [ 30/302] Installing re2-1:20240702-30. 100% | 189.9 MiB/s | 583.3 KiB | 00m00s [ 31/302] Installing fuse-0:2.9.9-23.fc 100% | 15.7 MiB/s | 209.0 KiB | 00m00s [ 32/302] Installing squashfuse-libs-0: 100% | 112.9 MiB/s | 115.7 KiB | 00m00s [ 33/302] Installing squashfuse-0:0.5.2 100% | 7.5 MiB/s | 92.7 KiB | 00m00s [ 34/302] Installing adobe-mappings-cma 100% | 190.5 MiB/s | 585.2 KiB | 00m00s [ 35/302] Installing libSM-0:1.2.5-2.fc 100% | 103.7 MiB/s | 106.2 KiB | 00m00s [ 36/302] Installing pyproject-rpm-macr 100% | 113.7 MiB/s | 116.4 KiB | 00m00s [ 37/302] Installing graphviz-libs-0:12 100% | 225.2 MiB/s | 1.4 MiB | 00m00s [ 38/302] Installing nss-softokn-freebl 100% | 194.6 MiB/s | 797.3 KiB | 00m00s [ 39/302] Installing nss-softokn-0:3.10 100% | 290.9 MiB/s | 2.0 MiB | 00m00s [ 40/302] Installing nss-sysinit-0:3.10 100% | 1.5 MiB/s | 18.9 KiB | 00m00s [ 41/302] Installing nss-0:3.109.0-1.fc 100% | 139.0 MiB/s | 1.9 MiB | 00m00s [ 42/302] Installing systemd-shared-0:2 100% | 231.7 MiB/s | 4.6 MiB | 00m00s [ 43/302] Installing urw-base35-z003-fo 100% | 42.5 MiB/s | 391.8 KiB | 00m00s [ 44/302] Installing urw-base35-standar 100% | 12.9 MiB/s | 66.0 KiB | 00m00s [ 45/302] Installing urw-base35-p052-fo 100% | 148.7 MiB/s | 1.5 MiB | 00m00s [ 46/302] Installing urw-base35-nimbus- 100% | 184.2 MiB/s | 2.4 MiB | 00m00s [ 47/302] Installing urw-base35-nimbus- 100% | 136.6 MiB/s | 1.4 MiB | 00m00s [ 48/302] Installing urw-base35-nimbus- 100% | 131.5 MiB/s | 1.1 MiB | 00m00s [ 49/302] Installing urw-base35-gothic- 100% | 116.3 MiB/s | 1.2 MiB | 00m00s [ 50/302] Installing urw-base35-d050000 100% | 16.7 MiB/s | 85.4 KiB | 00m00s [ 51/302] Installing urw-base35-c059-fo 100% | 139.5 MiB/s | 1.4 MiB | 00m00s [ 52/302] Installing urw-base35-bookman 100% | 151.7 MiB/s | 1.4 MiB | 00m00s [ 53/302] Installing urw-base35-fonts-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [ 54/302] Installing abattis-cantarell- 100% | 94.9 MiB/s | 194.4 KiB | 00m00s [ 55/302] Installing google-droid-sans- 100% | 240.7 MiB/s | 6.3 MiB | 00m00s [ 56/302] Installing libgcrypt-0:1.11.0 100% | 203.9 MiB/s | 1.2 MiB | 00m00s [ 57/302] Installing libksba-0:1.6.7-3. 100% | 201.6 MiB/s | 412.9 KiB | 00m00s [ 58/302] Installing libyuv-0:0-0.56.20 100% | 202.4 MiB/s | 414.6 KiB | 00m00s [ 59/302] Installing authselect-libs-0: 100% | 164.3 MiB/s | 841.3 KiB | 00m00s [ 60/302] Installing gdbm-1:1.23-9.fc42 100% | 31.0 MiB/s | 476.2 KiB | 00m00s [ 61/302] Installing dbus-common-1:1.16 100% | 2.6 MiB/s | 13.6 KiB | 00m00s [ 62/302] Installing dbus-broker-0:36-7 100% | 18.1 MiB/s | 388.2 KiB | 00m00s [ 63/302] Installing dbus-1:1.16.0-3.fc 100% | 0.0 B/s | 124.0 B | 00m00s [ 64/302] Installing systemd-pam-0:257. 100% | 161.6 MiB/s | 1.1 MiB | 00m00s [ 65/302] Installing systemd-0:257.4-3. 100% | 81.7 MiB/s | 12.1 MiB | 00m00s >>> Running post-install scriptlet: systemd-0:257.4-3.fc43.s390x >>> Finished post-install scriptlet: systemd-0:257.4-3.fc43.s390x >>> Scriptlet output: >>> Creating group 'systemd-journal' with GID 190. >>> Creating group 'dbus' with GID 81. >>> Creating user 'dbus' (System Message Bus) with UID 81 and GID 81. >>> Creating group 'systemd-oom' with GID 999. >>> Creating user 'systemd-oom' (systemd Userspace OOM Killer) with UID 999 and >>> [ 66/302] Installing device-mapper-libs 100% | 214.5 MiB/s | 439.2 KiB | 00m00s [ 67/302] Installing device-mapper-0:1. 100% | 23.2 MiB/s | 356.3 KiB | 00m00s [ 68/302] Installing cryptsetup-libs-0: 100% | 292.9 MiB/s | 2.3 MiB | 00m00s [ 69/302] Installing ncurses-0:6.5-5.20 100% | 40.4 MiB/s | 620.9 KiB | 00m00s [ 70/302] Installing perl-Digest-0:1.20 100% | 0.0 B/s | 37.1 KiB | 00m00s [ 71/302] Installing perl-B-0:1.89-515. 100% | 252.5 MiB/s | 517.1 KiB | 00m00s [ 72/302] Installing perl-FileHandle-0: 100% | 0.0 B/s | 9.8 KiB | 00m00s [ 73/302] Installing perl-Digest-MD5-0: 100% | 56.0 MiB/s | 57.3 KiB | 00m00s [ 74/302] Installing perl-MIME-Base32-0 100% | 0.0 B/s | 32.2 KiB | 00m00s [ 75/302] Installing perl-Data-Dumper-0 100% | 110.6 MiB/s | 113.3 KiB | 00m00s [ 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| 00m00s [102/302] Installing perl-Text-ParseWor 100% | 0.0 B/s | 14.6 KiB | 00m00s [103/302] Installing perl-Fcntl-0:1.18- 100% | 0.0 B/s | 49.8 KiB | 00m00s [104/302] Installing perl-base-0:2.27-5 100% | 0.0 B/s | 12.9 KiB | 00m00s [105/302] Installing perl-mro-0:1.29-51 100% | 0.0 B/s | 42.4 KiB | 00m00s [106/302] Installing perl-overloading-0 100% | 0.0 B/s | 5.5 KiB | 00m00s [107/302] Installing perl-IO-0:1.55-515 100% | 147.3 MiB/s | 150.9 KiB | 00m00s [108/302] Installing perl-Pod-Usage-4:2 100% | 7.0 MiB/s | 86.3 KiB | 00m00s [109/302] Installing perl-Errno-0:1.38- 100% | 0.0 B/s | 8.7 KiB | 00m00s [110/302] Installing perl-Scalar-List-U 100% | 144.8 MiB/s | 148.3 KiB | 00m00s [111/302] Installing perl-constant-0:1. 100% | 0.0 B/s | 27.4 KiB | 00m00s [112/302] Installing perl-File-Basename 100% | 0.0 B/s | 14.6 KiB | 00m00s [113/302] Installing perl-Getopt-Std-0: 100% | 0.0 B/s | 11.7 KiB | 00m00s [114/302] Installing perl-vars-0:1.05-5 100% | 0.0 B/s | 4.3 KiB | 00m00s 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00m00s [128/302] Installing tpm2-tss-0:4.1.3-6 100% | 176.0 MiB/s | 1.6 MiB | 00m00s [129/302] Installing dbus-libs-1:1.16.0 100% | 179.0 MiB/s | 366.5 KiB | 00m00s [130/302] Installing avahi-libs-0:0.9~r 100% | 164.2 MiB/s | 168.1 KiB | 00m00s [131/302] Installing emacs-filesystem-1 100% | 0.0 B/s | 544.0 B | 00m00s [132/302] Installing npth-0:1.8-2.fc42. 100% | 45.2 MiB/s | 46.3 KiB | 00m00s [133/302] Installing netpbm-0:11.09.00- 100% | 197.4 MiB/s | 606.4 KiB | 00m00s [134/302] Installing graphite2-0:1.3.14 100% | 14.3 MiB/s | 205.3 KiB | 00m00s [135/302] Installing rav1e-libs-0:0.7.1 100% | 261.9 MiB/s | 2.6 MiB | 00m00s [136/302] Installing svt-av1-libs-0:2.3 100% | 248.8 MiB/s | 2.7 MiB | 00m00s [137/302] Installing libdav1d-0:1.5.1-1 100% | 209.2 MiB/s | 642.6 KiB | 00m00s [138/302] Installing libaom-0:3.12.0-1. 100% | 262.3 MiB/s | 3.4 MiB | 00m00s [139/302] Installing libavif-0:1.1.1-1. 100% | 214.0 MiB/s | 219.1 KiB | 00m00s [140/302] Installing libpaper-1:2.1.1-8 100% | 0.0 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libXau-0:1.0.12-2. 100% | 68.5 MiB/s | 70.2 KiB | 00m00s [154/302] Installing libxcb-0:1.17.0-5. 100% | 218.0 MiB/s | 1.1 MiB | 00m00s [155/302] Installing libpipeline-0:1.5. 100% | 14.3 MiB/s | 146.3 KiB | 00m00s [156/302] Installing man-db-0:2.13.0-2. 100% | 78.0 MiB/s | 2.9 MiB | 00m00s [157/302] Installing fribidi-0:1.0.16-2 100% | 12.8 MiB/s | 196.3 KiB | 00m00s [158/302] Installing poppler-data-0:0.4 100% | 247.8 MiB/s | 12.4 MiB | 00m00s [159/302] Installing google-crc32c-0:1. 100% | 0.0 B/s | 21.0 KiB | 00m00s [160/302] Installing c-ares-0:1.34.4-3. 100% | 140.1 MiB/s | 287.0 KiB | 00m00s [161/302] Installing rsync-0:3.4.1-3.fc 100% | 50.4 MiB/s | 825.8 KiB | 00m00s [162/302] Installing lzo-0:2.10-14.fc42 100% | 187.8 MiB/s | 192.3 KiB | 00m00s [163/302] Installing squashfs-tools-0:4 100% | 45.1 MiB/s | 692.3 KiB | 00m00s [164/302] Installing libtommath-0:1.3.1 100% | 136.1 MiB/s | 139.3 KiB | 00m00s [165/302] Installing tcl-1:9.0.0-8.fc43 100% | 139.6 MiB/s | 4.5 MiB | 00m00s 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00m00s [179/302] Installing flexiblas-openblas 100% | 0.0 B/s | 39.8 KiB | 00m00s [180/302] Installing flexiblas-netlib-0 100% | 198.4 MiB/s | 12.5 MiB | 00m00s [181/302] Installing xml-common-0:0.6.3 100% | 79.2 MiB/s | 81.1 KiB | 00m00s [182/302] Installing libimagequant-0:4. 100% | 220.3 MiB/s | 902.2 KiB | 00m00s [183/302] Installing nettle-0:3.10.1-1. 100% | 203.3 MiB/s | 832.8 KiB | 00m00s [184/302] Installing gnutls-0:3.8.9-5.f 100% | 238.8 MiB/s | 3.3 MiB | 00m00s [185/302] Installing glib2-0:2.84.0-1.f 100% | 234.2 MiB/s | 15.0 MiB | 00m00s [186/302] Installing freetype-0:2.13.3- 100% | 225.6 MiB/s | 924.2 KiB | 00m00s [187/302] Installing harfbuzz-0:10.4.0- 100% | 232.0 MiB/s | 2.8 MiB | 00m00s [188/302] Installing fontconfig-0:2.16. 100% | 655.0 KiB/s | 797.8 KiB | 00m01s [189/302] Installing conmon-2:2.1.13-1. 100% | 12.0 MiB/s | 171.4 KiB | 00m00s [190/302] Installing gts-0:0.7.6-50.201 100% | 35.6 MiB/s | 620.1 KiB | 00m00s [191/302] Installing shared-mime-info-0 100% | 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Finish: build setup for snakemake-8.30.0-1.fc43.src.rpm Start: rpmbuild snakemake-8.30.0-1.fc43.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1742515200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.8hRfal Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.LKsJdQ + umask 022 + cd /builddir/build/BUILD/snakemake-8.30.0-build + cd /builddir/build/BUILD/snakemake-8.30.0-build + rm -rf snakemake-8.30.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/snakemake-8.30.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd snakemake-8.30.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-Revert-chore-work-around-setuptools-76-hash-mismatch.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-chore-Add-license-texts-for-things-bundled-in-the-as.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/snakemake-8.30.0-modified-assets.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + cd /builddir/build/BUILD/snakemake-8.30.0-build + /usr/bin/mkdir -p snakemake-8.30.0 + cd snakemake-8.30.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/snakemake-8.30.0-assets.tar.zst + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP . recursedown('.') recursedown('./.github') recursedown('./.github/ISSUE_TEMPLATE') recursedown('./.github/workflows') recursedown('./.github/workflows/scripts') recursedown('./apidocs') recursedown('./apidocs/_templates') recursedown('./apidocs/api_reference') recursedown('./apidocs/api_reference/internal') recursedown('./docs') recursedown('./docs/_static') recursedown('./docs/executing') recursedown('./docs/getting_started') 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recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/simulations/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/scripts') recursedown('./tests/test_parser') recursedown('./tests/test_parser/expected-results') recursedown('./tests/test_parsing_terminal_comment_following_statement') recursedown('./tests/test_parsing_terminal_comment_following_statement/expected-results') recursedown('./tests/test_path with spaces') recursedown('./tests/test_path with spaces/expected-results') recursedown('./tests/test_pathlib') recursedown('./tests/test_pathlib/expected-results') recursedown('./tests/test_pathlib/expected-results/outdir') recursedown('./tests/test_pathlib/expected-results/outdir/function_unpacking') recursedown('./tests/test_pathlib_missing_file') recursedown('./tests/test_pathlib_missing_file/expected-results') recursedown('./tests/test_pep_pathlib') recursedown('./tests/test_pep_pathlib/expected-results') recursedown('./tests/test_pep_pathlib/pep') recursedown('./tests/test_pep_pathlib/workflow') recursedown('./tests/test_pep_pathlib/workflow/schemas') recursedown('./tests/test_peppy') recursedown('./tests/test_peppy/expected-results') recursedown('./tests/test_peppy/pep') recursedown('./tests/test_peppy/workflow') recursedown('./tests/test_peppy/workflow/schemas') recursedown('./tests/test_pipe_depend') recursedown('./tests/test_pipe_depend/expected-results') recursedown('./tests/test_pipes') recursedown('./tests/test_pipes/expected-results') recursedown('./tests/test_pipes2') recursedown('./tests/test_pipes2/expected-results') recursedown('./tests/test_pipes_fail') recursedown('./tests/test_pipes_fail/expected-results') recursedown('./tests/test_pipes_multiple') recursedown('./tests/test_pipes_multiple/expected-results') recursedown('./tests/test_prebuilt_conda_script') recursedown('./tests/test_prebuilt_conda_script/dummy_package') recursedown('./tests/test_prebuilt_conda_script/dummy_package/src') recursedown('./tests/test_prebuilt_conda_script/dummy_package/src/dummy') recursedown('./tests/test_prebuilt_conda_script/expected-results') recursedown('./tests/test_profile') recursedown('./tests/test_profile/expected-results') recursedown('./tests/test_protected_symlink_output') recursedown('./tests/test_protected_symlink_output/expected-results') recursedown('./tests/test_queue_input') recursedown('./tests/test_queue_input/expected-results') recursedown('./tests/test_r_wrapper') recursedown('./tests/test_remote_auto') recursedown('./tests/test_remote_auto/expected-results') recursedown('./tests/test_remote_azure') recursedown('./tests/test_remote_gs') recursedown('./tests/test_remote_gs/expected-results') recursedown('./tests/test_remote_irods') recursedown('./tests/test_remote_irods/expected-results') recursedown('./tests/test_remote_irods/setup-data') recursedown('./tests/test_remote_irods/test-data') recursedown('./tests/test_remote_log') recursedown('./tests/test_remote_log/expected-results') recursedown('./tests/test_remote_ncbi') recursedown('./tests/test_remote_ncbi/expected-results') recursedown('./tests/test_remote_ncbi_simple') recursedown('./tests/test_remote_ncbi_simple/expected-results') recursedown('./tests/test_remote_sftp') recursedown('./tests/test_remote_sftp/expected-results') recursedown('./tests/test_remote_zenodo') recursedown('./tests/test_remote_zenodo/expected-results') recursedown('./tests/test_report') recursedown('./tests/test_report/.snakemake') recursedown('./tests/test_report/.snakemake/metadata') recursedown('./tests/test_report/data') recursedown('./tests/test_report/envs') recursedown('./tests/test_report/expected-results') recursedown('./tests/test_report/report') recursedown('./tests/test_report/testdir') recursedown('./tests/test_report_dir') recursedown('./tests/test_report_dir/expected-results') recursedown('./tests/test_report_dir/test') recursedown('./tests/test_report_dir/test/js') recursedown('./tests/test_report_display_code') recursedown('./tests/test_report_display_code/expected-results') recursedown('./tests/test_report_href') recursedown('./tests/test_report_href/expected-results') recursedown('./tests/test_report_href/subdir') recursedown('./tests/test_report_href/subdir/subdir') recursedown('./tests/test_report_zip') recursedown('./tests/test_report_zip/.snakemake') recursedown('./tests/test_report_zip/.snakemake/metadata') recursedown('./tests/test_report_zip/data') recursedown('./tests/test_report_zip/envs') recursedown('./tests/test_report_zip/expected-results') recursedown('./tests/test_report_zip/report') recursedown('./tests/test_report_zip/testdir') recursedown('./tests/test_resource_string_in_cli_or_profile') recursedown('./tests/test_resource_string_in_cli_or_profile/expected-results') recursedown('./tests/test_resource_string_in_cli_or_profile/profiles') recursedown('./tests/test_resource_tbdstring') recursedown('./tests/test_restartable_job_cmd_exit_1') recursedown('./tests/test_restartable_job_cmd_exit_1/expected-results') recursedown('./tests/test_restartable_job_qsub_exit_1') recursedown('./tests/test_restartable_job_qsub_exit_1/expected-results') recursedown('./tests/test_retries') recursedown('./tests/test_retries/expected-results') recursedown('./tests/test_retries_not_overriden') recursedown('./tests/test_retries_not_overriden/expected-results') recursedown('./tests/test_rule_defined_in_for_loop') recursedown('./tests/test_rule_defined_in_for_loop/expected-results') recursedown('./tests/test_rule_inheritance_globals') recursedown('./tests/test_rule_inheritance_globals/.snakemake') recursedown('./tests/test_rule_inheritance_globals/.snakemake/metadata') recursedown('./tests/test_rule_inheritance_globals/expected-results') recursedown('./tests/test_ruledag') recursedown('./tests/test_ruledeps') recursedown('./tests/test_ruledeps/expected-results') recursedown('./tests/test_run_namedlist') recursedown('./tests/test_run_namedlist/expected-results') recursedown('./tests/test_runtime_conversion_from_workflow_profile') recursedown('./tests/test_runtime_conversion_from_workflow_profile/expected-results') recursedown('./tests/test_runtime_conversion_from_workflow_profile/workflow') recursedown('./tests/test_runtime_conversion_from_workflow_profile/workflow/profiles') recursedown('./tests/test_runtime_conversion_from_workflow_profile/workflow/profiles/default') recursedown('./tests/test_same_wildcard') recursedown('./tests/test_same_wildcard/expected-results') recursedown('./tests/test_scatter_gather') recursedown('./tests/test_scatter_gather/expected-results') recursedown('./tests/test_scatter_gather/expected-results/gathered') recursedown('./tests/test_scatter_gather/expected-results/splitted') recursedown('./tests/test_scatter_gather_multiple_processes') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/gathered') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/split_a') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/split_b') recursedown('./tests/test_scheduler_sequential_all_cores') recursedown('./tests/test_scheduler_sequential_all_cores/expected-results') recursedown('./tests/test_script') recursedown('./tests/test_script/envs') recursedown('./tests/test_script/expected-results') recursedown('./tests/test_script/scripts') recursedown('./tests/test_script_pre_py39') recursedown('./tests/test_script_pre_py39/expected-results') recursedown('./tests/test_script_py') recursedown('./tests/test_script_py/expected-results') recursedown('./tests/test_script_py/scripts') recursedown('./tests/test_script_rs') recursedown('./tests/test_script_rs/envs') recursedown('./tests/test_script_rs/expected-results') recursedown('./tests/test_script_rs/scripts') recursedown('./tests/test_script_xsh') recursedown('./tests/test_script_xsh/envs') recursedown('./tests/test_script_xsh/expected-results') recursedown('./tests/test_script_xsh/scripts') recursedown('./tests/test_service_jobs') recursedown('./tests/test_service_jobs/expected-results') recursedown('./tests/test_set_resources') recursedown('./tests/test_set_resources/expected-results') recursedown('./tests/test_set_resources_complex') recursedown('./tests/test_set_resources_complex/expected-results') recursedown('./tests/test_set_resources_complex/test-profile') recursedown('./tests/test_set_threads') recursedown('./tests/test_set_threads/expected-results') recursedown('./tests/test_shadow') recursedown('./tests/test_shadow/expected-results') recursedown('./tests/test_shadow_copy') recursedown('./tests/test_shadow_copy/expected-results') recursedown('./tests/test_shadow_prefix') recursedown('./tests/test_shadow_prefix/expected-results') recursedown('./tests/test_shadowed_log') recursedown('./tests/test_shadowed_log/expected-results') recursedown('./tests/test_shell') recursedown('./tests/test_shell/expected-results') recursedown('./tests/test_shell_exec') recursedown('./tests/test_shell_exec/expected-results') recursedown('./tests/test_singularity') recursedown('./tests/test_singularity/expected-results') recursedown('./tests/test_singularity_conda') recursedown('./tests/test_singularity_conda/expected-results') recursedown('./tests/test_singularity_global') recursedown('./tests/test_singularity_global/expected-results') recursedown('./tests/test_singularity_module') recursedown('./tests/test_singularity_module/expected-results') recursedown('./tests/test_singularity_none') recursedown('./tests/test_singularity_none/expected-results') recursedown('./tests/test_slurm_mpi') recursedown('./tests/test_slurm_mpi/envs') recursedown('./tests/test_slurm_mpi/expected-results') recursedown('./tests/test_solver') recursedown('./tests/test_solver/expected-results') recursedown('./tests/test_source_path') recursedown('./tests/test_source_path/expected-results') recursedown('./tests/test_source_path/workflow') recursedown('./tests/test_source_path/workflow/resources') recursedown('./tests/test_spaces_in_fnames') recursedown('./tests/test_spaces_in_fnames/expected-results') recursedown('./tests/test_speed') recursedown('./tests/test_storage') recursedown('./tests/test_storage/expected-results') recursedown('./tests/test_storage_cleanup_local') recursedown('./tests/test_storage_cleanup_local/expected-results') recursedown('./tests/test_storage_cleanup_local/expected-results/fs-storage') recursedown('./tests/test_storage_localrule') recursedown('./tests/test_storage_localrule/expected-results') recursedown('./tests/test_storage_localrule/expected-results/fs-storage') recursedown('./tests/test_storage_noretrieve_dryrun') recursedown('./tests/test_storage_noretrieve_dryrun/expected-results') recursedown('./tests/test_storage_noretrieve_dryrun/fs') recursedown('./tests/test_strict_mode') recursedown('./tests/test_strict_mode/expected-results') recursedown('./tests/test_string_resources') recursedown('./tests/test_string_resources/expected-results') recursedown('./tests/test_subpath') recursedown('./tests/test_subpath/expected-results') recursedown('./tests/test_subpath/expected-results/results') recursedown('./tests/test_subpath/expected-results/results/foo') recursedown('./tests/test_subpath/expected-results/results/foo/bar') recursedown('./tests/test_subworkflow_config') recursedown('./tests/test_subworkflow_config/expected-results') recursedown('./tests/test_subworkflows') recursedown('./tests/test_subworkflows/expected-results') recursedown('./tests/test_symlink_temp') recursedown('./tests/test_symlink_temp/expected-results') recursedown('./tests/test_symlink_time_handling') recursedown('./tests/test_symlink_time_handling/expected-results') recursedown('./tests/test_temp') recursedown('./tests/test_temp/expected-results') recursedown('./tests/test_temp_expand') recursedown('./tests/test_temp_expand/expected-results') recursedown('./tests/test_template_engine') recursedown('./tests/test_template_engine/expected-results') recursedown('./tests/test_tes') recursedown('./tests/test_tes/expected-results') recursedown('./tests/test_threads') recursedown('./tests/test_threads/expected-results') recursedown('./tests/test_threads0') recursedown('./tests/test_threads0/expected-results') recursedown('./tests/test_tibanna') recursedown('./tests/test_tibanna/expected-results') recursedown('./tests/test_tibanna/scripts') recursedown('./tests/test_tmpdir') recursedown('./tests/test_tmpdir/expected-results') recursedown('./tests/test_toposort') recursedown('./tests/test_touch') recursedown('./tests/test_touch/expected-results') recursedown('./tests/test_touch_pipeline_with_temp_dir') recursedown('./tests/test_touch_pipeline_with_temp_dir/expected-results') recursedown('./tests/test_touch_remote_prefix') recursedown('./tests/test_touch_remote_prefix/expected-results') recursedown('./tests/test_touch_with_directories') recursedown('./tests/test_touch_with_directories/expected-results') recursedown('./tests/test_unpack_dict') recursedown('./tests/test_unpack_dict/expected-results') recursedown('./tests/test_unpack_list') recursedown('./tests/test_unpack_list/expected-results') recursedown('./tests/test_until') recursedown('./tests/test_until/expected-results') recursedown('./tests/test_update_config') recursedown('./tests/test_update_config/expected-results') recursedown('./tests/test_update_flag') recursedown('./tests/test_update_flag/expected-results') recursedown('./tests/test_url_include') recursedown('./tests/test_url_include/expected-results') recursedown('./tests/test_use_rule_same_module') recursedown('./tests/test_use_rule_same_module/expected-results') recursedown('./tests/test_validate') recursedown('./tests/test_validate/expected-results') recursedown('./tests/test_validate/module-test') recursedown('./tests/test_wildcard_count_ambiguity') recursedown('./tests/test_wildcard_count_ambiguity/expected-results') recursedown('./tests/test_wildcard_keyword') recursedown('./tests/test_wildcard_keyword/expected-results') recursedown('./tests/test_workflow_profile') recursedown('./tests/test_workflow_profile/dummy-general-profile') recursedown('./tests/test_workflow_profile/expected-results') recursedown('./tests/test_workflow_profile/workflow') recursedown('./tests/test_workflow_profile/workflow/profiles') recursedown('./tests/test_workflow_profile/workflow/profiles/default') recursedown('./tests/test_wrapper') recursedown('./tests/test_wrapper/expected-results') recursedown('./tests/test_xrootd') recursedown('./tests/test_yaml_config') recursedown('./tests/test_yaml_config/expected-results') ./tests/test_script_rs/scripts/test.py: no change ./tests/test_singularity/script.py: no change ./tests/test_singularity_module/script.py: no change ./tests/test_string_resources/qsub.py: updating ./tests/test_tibanna/cleanup.py: no change ./tests/test_tibanna/scripts/step2.py: no change 'misc/nano/README.md' -> 'README-nano.md' 'misc/vim/README.md' -> 'README-vim.md' + sed -r -i '1{/^#!/d}' snakemake/executors/jobscript.sh snakemake/executors/google_lifesciences_helper.py + for editor in nano vim + cp -vp misc/nano/README.md README-nano.md + for editor in nano vim + cp -vp misc/vim/README.md README-vim.md + cat ++ sha256sum -b snakemake/assets/data/tailwindcss/tailwind.css ++ awk '{print $1}' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.RJGIDZ + umask 022 + cd /builddir/build/BUILD/snakemake-8.30.0-build + cd snakemake-8.30.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir + RPM_TOXENV=py313 + FEDORA=43 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 74.1.3) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info creating snakemake.egg-info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt writing manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/snakemake-8.30.0.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: appdirs Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: immutables Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: connection-pool >=0.0.3 Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: docutils Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: gitpython Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: humanfriendly Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.6) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: jsonschema Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: nbformat Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 24.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: psutil Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pulp <2.10,>=2.3.1 Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pyyaml Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests <3.0,>=2.8.1 (installed: requests 2.32.3) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: smart-open <8.0,>=4.0 Handling snakemake-interface-executor-plugins <10.0,>=9.3.2 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.3.2 (installed: snakemake-interface-executor-plugins 9.3.3) Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0 (installed: snakemake-interface-common 1.17.4) Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3 (installed: snakemake-interface-storage-plugins 3.5.0) Handling snakemake-interface-report-plugins <2.0.0,>=1.1.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: snakemake-interface-report-plugins <2.0.0,>=1.1.0 Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: tabulate Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.17.1) Handling yte <2.0,>=1.5.5 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: yte <2.0,>=1.5.5 Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: dpath <3.0.0,>=2.1.6 Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: conda-inject <2.0,>=1.3.1 Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: slack-sdk ; extra == 'messaging' Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pygments ; extra == 'reports' + cat /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-buildrequires + rm -rfv snakemake-8.30.0.dist-info/ removed 'snakemake-8.30.0.dist-info/entry_points.txt' removed 'snakemake-8.30.0.dist-info/top_level.txt' removed 'snakemake-8.30.0.dist-info/METADATA' removed 'snakemake-8.30.0.dist-info/LICENSE.md' removed directory 'snakemake-8.30.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-8.30.0-1.fc43.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: updates 100% | 5.9 KiB/s | 6.5 KiB | 00m01s fedora 100% | 13.6 KiB/s | 5.5 KiB | 00m00s Copr repository 100% | 4.0 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 4.8 KiB/s | 3.8 KiB | 00m01s Repositories loaded. Package "R-core-4.4.3-1.fc43.s390x" is already installed. Package "environment-modules-5.5.0-3.fc42.s390x" is already installed. Package "graphviz-12.2.1-3.fc42.s390x" is already installed. Package "help2man-1.49.3-7.fc42.noarch" is already installed. Package "pyproject-rpm-macros-1.18.1-1.fc43.noarch" is already installed. Package "python-unversioned-command-3.13.2-2.fc43.noarch" is already installed. Package "python3-devel-3.13.2-2.fc43.s390x" is already installed. Package "python3-boto3-1.37.17-1.fc43.noarch" is already installed. Package "python3-configargparse-1.7-6.fc42.noarch" is already installed. Package "python3-flask-1:3.1.0-3.fc42.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-7.fc42.noarch" is already installed. Package "python3-packaging-24.2-3.fc42.noarch" is already installed. Package "python3-pandas-2.2.3-1.fc42~bootstrap.s390x" is already installed. Package "python3-pytest-8.3.5-2.fc43.noarch" is already installed. Package "python3-pytest-mock-3.14.0-3.fc42.noarch" is already installed. Package "python3-reretry-0.11.8-12.fc42.noarch" is already installed. Package "python3-setuptools-74.1.3-5.fc42.noarch" is already installed. Package "python3-snakemake-executor-plugin-cluster-generic-1.0.9-5.fc42.noarch" is already installed. Package "python3-snakemake-storage-plugin-fs-1.0.6-3.fc42.noarch" is already installed. Package "python3-snakemake-storage-plugin-http-0.2.3-8.fc42.noarch" is already installed. Package "python3-snakemake-storage-plugin-s3-0.3.1-1.fc43.noarch" is already installed. Package "python3-throttler-1.2.2-14.fc42.noarch" is already installed. Package "python3-wrapt-1.17.1-2.fc42.s390x" is already installed. Package "strace-6.13-1.fc42.s390x" is already installed. Package "stress-ng-0.18.11-1.fc43.s390x" is already installed. Package "vim-filesystem-2:9.1.1227-1.fc43.noarch" is already installed. Package Arch Version Repository Size Installing: python3-GitPython noarch 3.1.43-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB python3-appdirs noarch 1.4.4-26.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.9 KiB python3-conda-inject noarch 1.3.2-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 23.6 KiB python3-connection_pool noarch 0.0.3-14.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21.1 KiB python3-docutils noarch 0.21.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.9 MiB python3-dpath noarch 2.2.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 93.0 KiB python3-humanfriendly noarch 10.0-14.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 542.5 KiB python3-immutables s390x 0.21-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 185.6 KiB python3-jsonschema noarch 4.23.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 886.2 KiB python3-nbformat noarch 5.10.4-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 549.7 KiB python3-pip noarch 24.3.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.3 MiB python3-psutil s390x 6.1.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB python3-pulp noarch 2.9.0-16.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB python3-pygments noarch 2.19.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10.8 MiB python3-pyyaml s390x 6.0.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 784.7 KiB python3-slackclient noarch 3.35.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.9 MiB python3-smart_open noarch 7.1.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 495.9 KiB python3-snakemake-interface-report-plugins noarch 1.1.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 32.4 KiB python3-tabulate noarch 0.9.0-11.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 341.1 KiB python3-yte noarch 1.7.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 70.6 KiB Installing dependencies: MUMPS s390x 5.7.3-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10.0 MiB MUMPS-common noarch 5.7.3-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 988.4 KiB asl s390x 20241122-2.20241212gitae937db.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.5 MiB cliquer-libs s390x 1.22-10.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 75.4 KiB coin-or-Cbc s390x 2.10.12-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB coin-or-Cgl s390x 0.60.9-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB coin-or-Clp s390x 1.17.10-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.8 MiB coin-or-CoinUtils s390x 2.11.12-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 MiB coin-or-Osi s390x 0.108.11-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.9 MiB git-core s390x 2.49.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 23.3 MiB glpk s390x 5.0-13.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 946.5 KiB libcbor s390x 0.11.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 77.6 KiB libedit s390x 3.1-55.20250104cvs.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 271.9 KiB libfido2 s390x 1.15.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 234.1 KiB libnauty s390x 2.8.9-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.8 MiB libyaml s390x 0.2.5-16.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 126.2 KiB metis s390x 5.1.0.3-7.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB openssh s390x 9.9p1-14.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB openssh-clients s390x 9.9p1-14.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.7 MiB python3-attrs noarch 25.3.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 402.5 KiB python3-boto noarch 2.49.0-25.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.5 MiB python3-fastjsonschema noarch 2.21.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 189.1 KiB python3-gitdb noarch 4.0.11-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.1 KiB python3-jsonschema-specifications noarch 2024.10.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 46.2 KiB python3-jupyter-core noarch 5.7.2-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 196.8 KiB python3-plac noarch 1.4.3-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 228.4 KiB python3-platformdirs noarch 4.2.2-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 162.0 KiB python3-referencing noarch 0.36.2-2.fc41 updates 326.1 KiB python3-rpds-py s390x 0.23.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 956.6 KiB python3-smmap noarch 5.0.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 198.0 KiB python3-traitlets noarch 5.14.3-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 954.6 KiB python3-zombie-imp noarch 0.0.3-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 58.2 KiB scotch s390x 7.0.6-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 826.3 KiB suitesparse s390x 7.10.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 52.5 MiB zlib-ng s390x 2.2.4-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 128.5 KiB Transaction Summary: Installing: 55 packages Total size of inbound packages is 40 MiB. Need to download 40 MiB. After this operation, 168 MiB extra will be used (install 168 MiB, remove 0 B). [ 1/55] python3-conda-inject-0:1.3.2-5. 100% | 23.8 KiB/s | 18.9 KiB | 00m01s [ 2/55] python3-snakemake-interface-rep 100% | 27.6 KiB/s | 22.0 KiB | 00m01s [ 3/55] python3-dpath-0:2.2.0-3.fc42.no 100% | 41.7 KiB/s | 37.9 KiB | 00m01s [ 4/55] python3-smart_open-0:7.1.0-2.fc 100% | 304.0 KiB/s | 119.5 KiB | 00m00s [ 5/55] python3-yte-0:1.7.0-1.fc43.noar 100% | 91.2 KiB/s | 35.6 KiB | 00m00s [ 6/55] python3-pulp-0:2.9.0-16.fc43.no 100% | 452.0 KiB/s | 234.1 KiB | 00m01s [ 7/55] python3-appdirs-0:1.4.4-26.fc42 100% | 90.6 KiB/s | 23.7 KiB | 00m00s [ 8/55] python3-connection_pool-0:0.0.3 100% | 65.1 KiB/s | 17.1 KiB | 00m00s [ 9/55] python3-GitPython-0:3.1.43-2.fc 100% | 978.0 KiB/s | 384.4 KiB | 00m00s [10/55] python3-humanfriendly-0:10.0-14 100% | 352.8 KiB/s | 137.9 KiB | 00m00s [11/55] python3-docutils-0:0.21.2-2.fc4 100% | 1.6 MiB/s | 1.0 MiB | 00m01s [12/55] python3-immutables-0:0.21-2.fc4 100% | 226.1 KiB/s | 59.9 KiB | 00m00s [13/55] python3-jsonschema-0:4.23.0-2.f 100% | 753.8 KiB/s | 198.3 KiB | 00m00s [14/55] python3-nbformat-0:5.10.4-1.fc4 100% | 475.1 KiB/s | 124.0 KiB | 00m00s [15/55] python3-psutil-0:6.1.1-2.fc42.s 100% | 1.0 MiB/s | 267.9 KiB | 00m00s [16/55] python3-pip-0:24.3.1-2.fc42.noa 100% | 4.8 MiB/s | 2.5 MiB | 00m01s [17/55] python3-pyyaml-0:6.0.2-2.fc42.s 100% | 835.9 KiB/s | 221.5 KiB | 00m00s [18/55] python3-pygments-0:2.19.1-1.fc4 100% | 4.6 MiB/s | 2.4 MiB | 00m01s [19/55] python3-slackclient-0:3.35.0-1. 100% | 1.9 MiB/s | 511.0 KiB | 00m00s [20/55] python3-tabulate-0:0.9.0-11.fc4 100% | 271.8 KiB/s | 71.5 KiB | 00m00s [21/55] python3-plac-0:1.4.3-5.fc42.noa 100% | 237.9 KiB/s | 62.3 KiB | 00m00s [22/55] python3-boto-0:2.49.0-25.fc42.n 100% | 6.3 MiB/s | 1.7 MiB | 00m00s [23/55] libyaml-0:0.2.5-16.fc42.s390x 100% | 234.2 KiB/s | 61.4 KiB | 00m00s [24/55] coin-or-Cbc-0:2.10.12-6.fc42.s3 100% | 3.3 MiB/s | 901.8 KiB | 00m00s [25/55] python3-fastjsonschema-0:2.21.1 100% | 222.8 KiB/s | 58.8 KiB | 00m00s [26/55] python3-jupyter-core-0:5.7.2-8. 100% | 272.2 KiB/s | 71.3 KiB | 00m00s [27/55] python3-traitlets-0:5.14.3-4.fc 100% | 766.7 KiB/s | 200.9 KiB | 00m00s [28/55] python3-platformdirs-0:4.2.2-4. 100% | 157.1 KiB/s | 41.2 KiB | 00m00s [29/55] python3-attrs-0:25.3.0-1.fc43.n 100% | 456.5 KiB/s | 120.1 KiB | 00m00s [30/55] python3-jsonschema-specificatio 100% | 78.8 KiB/s | 21.7 KiB | 00m00s [31/55] python3-rpds-py-0:0.23.1-1.fc43 100% | 1.2 MiB/s | 350.5 KiB | 00m00s [32/55] python3-gitdb-0:4.0.11-2.fc42.n 100% | 475.4 KiB/s | 131.2 KiB | 00m00s [33/55] python3-referencing-0:0.36.2-2. 100% | 103.4 KiB/s | 85.3 KiB | 00m01s [34/55] git-core-0:2.49.0-1.fc43.s390x 100% | 12.1 MiB/s | 5.0 MiB | 00m00s [35/55] openssh-clients-0:9.9p1-14.fc43 100% | 2.8 MiB/s | 760.5 KiB | 00m00s [36/55] openssh-0:9.9p1-14.fc43.s390x 100% | 1.3 MiB/s | 350.7 KiB | 00m00s [37/55] coin-or-Cgl-0:0.60.9-3.fc42.s39 100% | 1.7 MiB/s | 474.3 KiB | 00m00s [38/55] asl-0:20241122-2.20241212gitae9 100% | 1.1 MiB/s | 586.9 KiB | 00m01s [39/55] coin-or-Clp-0:1.17.10-5.fc42.s3 100% | 2.8 MiB/s | 1.1 MiB | 00m00s [40/55] MUMPS-0:5.7.3-3.fc43.s390x 100% | 8.6 MiB/s | 2.4 MiB | 00m00s [41/55] MUMPS-common-0:5.7.3-3.fc43.noa 100% | 3.4 MiB/s | 920.2 KiB | 00m00s [42/55] scotch-0:7.0.6-2.fc42.s390x 100% | 1.2 MiB/s | 319.1 KiB | 00m00s [43/55] coin-or-CoinUtils-0:2.11.12-2.f 100% | 2.0 MiB/s | 558.6 KiB | 00m00s [44/55] coin-or-Osi-0:0.108.11-3.fc42.s 100% | 5.4 MiB/s | 2.2 MiB | 00m00s [45/55] libnauty-0:2.8.9-3.fc42.s390x 100% | 2.4 MiB/s | 1.0 MiB | 00m00s [46/55] metis-0:5.1.0.3-7.fc42.s390x 100% | 2.1 MiB/s | 598.8 KiB | 00m00s [47/55] python3-smmap-0:5.0.1-2.fc42.no 100% | 205.2 KiB/s | 56.2 KiB | 00m00s [48/55] libedit-0:3.1-55.20250104cvs.fc 100% | 431.7 KiB/s | 114.8 KiB | 00m00s [49/55] libfido2-0:1.15.0-3.fc42.s390x 100% | 348.9 KiB/s | 93.5 KiB | 00m00s [50/55] cliquer-libs-0:1.22-10.fc42.s39 100% | 158.0 KiB/s | 41.4 KiB | 00m00s [51/55] libcbor-0:0.11.0-3.fc42.s390x 100% | 124.6 KiB/s | 32.5 KiB | 00m00s [52/55] zlib-ng-0:2.2.4-2.fc43.s390x 100% | 286.1 KiB/s | 74.7 KiB | 00m00s [53/55] glpk-0:5.0-13.fc42.s390x 100% | 1.6 MiB/s | 428.8 KiB | 00m00s [54/55] python3-zombie-imp-0:0.0.3-1.fc 100% | 112.6 KiB/s | 29.7 KiB | 00m00s [55/55] suitesparse-0:7.10.0-1.fc43.s39 100% | 13.2 MiB/s | 10.7 MiB | 00m01s -------------------------------------------------------------------------------- [55/55] Total 100% | 5.3 MiB/s | 39.7 MiB | 00m07s Running transaction [ 1/57] Verify package files 100% | 423.0 B/s | 55.0 B | 00m00s [ 2/57] Prepare transaction 100% | 462.0 B/s | 55.0 B | 00m00s [ 3/57] Installing suitesparse-0:7.10.0 100% | 360.1 MiB/s | 52.6 MiB | 00m00s [ 4/57] Installing zlib-ng-0:2.2.4-2.fc 100% | 126.8 MiB/s | 129.9 KiB | 00m00s [ 5/57] Installing asl-0:20241122-2.202 100% | 353.3 MiB/s | 2.5 MiB | 00m00s [ 6/57] Installing python3-rpds-py-0:0. 100% | 234.5 MiB/s | 960.6 KiB | 00m00s [ 7/57] Installing python3-attrs-0:25.3 100% | 135.7 MiB/s | 416.7 KiB | 00m00s [ 8/57] Installing python3-referencing- 100% | 163.9 MiB/s | 335.7 KiB | 00m00s [ 9/57] Installing python3-traitlets-0: 100% | 237.2 MiB/s | 971.7 KiB | 00m00s [10/57] Installing python3-jsonschema-s 100% | 27.1 MiB/s | 55.5 KiB | 00m00s [11/57] Installing python3-jsonschema-0 100% | 52.2 MiB/s | 908.9 KiB | 00m00s [12/57] Installing glpk-0:5.0-13.fc42.s 100% | 231.4 MiB/s | 947.9 KiB | 00m00s [13/57] Installing coin-or-CoinUtils-0: 100% | 260.2 MiB/s | 1.3 MiB | 00m00s [14/57] Installing coin-or-Osi-0:0.108. 100% | 267.4 MiB/s | 5.9 MiB | 00m00s [15/57] Installing python3-zombie-imp-0 100% | 20.2 MiB/s | 62.2 KiB | 00m00s [16/57] Installing python3-boto-0:2.49. 100% | 207.4 MiB/s | 9.7 MiB | 00m00s [17/57] Installing libcbor-0:0.11.0-3.f 100% | 0.0 B/s | 79.0 KiB | 00m00s [18/57] Installing libfido2-0:1.15.0-3. 100% | 230.1 MiB/s | 235.6 KiB | 00m00s [19/57] Installing cliquer-libs-0:1.22- 100% | 75.2 MiB/s | 77.0 KiB | 00m00s [20/57] Installing libnauty-0:2.8.9-3.f 100% | 383.9 MiB/s | 5.8 MiB | 00m00s [21/57] Installing libedit-0:3.1-55.202 100% | 267.1 MiB/s | 273.6 KiB | 00m00s [22/57] Installing python3-smmap-0:5.0. 100% | 100.4 MiB/s | 205.7 KiB | 00m00s [23/57] Installing python3-gitdb-0:4.0. 100% | 126.1 MiB/s | 516.6 KiB | 00m00s [24/57] Installing metis-0:5.1.0.3-7.fc 100% | 64.4 MiB/s | 1.0 MiB | 00m00s [25/57] Installing scotch-0:7.0.6-2.fc4 100% | 202.7 MiB/s | 830.3 KiB | 00m00s [26/57] Installing MUMPS-common-0:5.7.3 100% | 483.1 MiB/s | 989.4 KiB | 00m00s [27/57] Installing MUMPS-0:5.7.3-3.fc43 100% | 311.5 MiB/s | 10.0 MiB | 00m00s [28/57] Installing coin-or-Cgl-0:0.60.9 100% | 215.7 MiB/s | 1.1 MiB | 00m00s [29/57] Installing coin-or-Clp-0:1.17.1 100% | 117.0 MiB/s | 2.8 MiB | 00m00s [30/57] Installing coin-or-Cbc-0:2.10.1 100% | 81.6 MiB/s | 2.4 MiB | 00m00s >>> Running post-install scriptlet: coin-or-Cbc-0:2.10.12-6.fc42.s390x >>> Finished post-install scriptlet: coin-or-Cbc-0:2.10.12-6.fc42.s390x >>> Scriptlet output: >>> reading /var/lib/alternatives/CoinCbc >>> [31/57] Installing openssh-0:9.9p1-14.f 100% | 77.2 MiB/s | 1.4 MiB | 00m00s [32/57] Installing openssh-clients-0:9. 100% | 74.6 MiB/s | 2.7 MiB | 00m00s [33/57] Installing git-core-0:2.49.0-1. 100% | 274.5 MiB/s | 23.3 MiB | 00m00s [34/57] Installing python3-platformdirs 100% | 164.5 MiB/s | 168.4 KiB | 00m00s [35/57] Installing python3-jupyter-core 100% | 14.3 MiB/s | 205.3 KiB | 00m00s [36/57] Installing python3-fastjsonsche 100% | 96.2 MiB/s | 197.1 KiB | 00m00s [37/57] Installing libyaml-0:0.2.5-16.f 100% | 124.6 MiB/s | 127.6 KiB | 00m00s [38/57] Installing python3-pyyaml-0:6.0 100% | 156.0 MiB/s | 798.5 KiB | 00m00s [39/57] Installing python3-plac-0:1.4.3 100% | 17.4 MiB/s | 232.0 KiB | 00m00s [40/57] Installing python3-dpath-0:2.2. 100% | 96.3 MiB/s | 98.7 KiB | 00m00s [41/57] Installing python3-yte-0:1.7.0- 100% | 5.8 MiB/s | 76.9 KiB | 00m00s [42/57] Installing python3-conda-inject 100% | 25.7 MiB/s | 26.3 KiB | 00m00s [43/57] Installing python3-nbformat-0:5 100% | 33.2 MiB/s | 577.9 KiB | 00m00s [44/57] Installing python3-GitPython-0: 100% | 229.7 MiB/s | 1.8 MiB | 00m00s [45/57] Installing python3-pulp-0:2.9.0 100% | 61.8 MiB/s | 1.1 MiB | 00m00s [46/57] Installing python3-smart_open-0 100% | 165.4 MiB/s | 508.1 KiB | 00m00s [47/57] Installing python3-tabulate-0:0 100% | 24.0 MiB/s | 344.6 KiB | 00m00s [48/57] Installing python3-slackclient- 100% | 143.1 MiB/s | 3.0 MiB | 00m00s [49/57] Installing python3-pygments-0:2 100% | 172.4 MiB/s | 11.0 MiB | 00m00s [50/57] Installing python3-psutil-0:6.1 100% | 205.2 MiB/s | 1.4 MiB | 00m00s [51/57] Installing python3-pip-0:24.3.1 100% | 154.9 MiB/s | 11.6 MiB | 00m00s [52/57] Installing python3-immutables-0 100% | 187.1 MiB/s | 191.6 KiB | 00m00s [53/57] Installing python3-humanfriendl 100% | 36.1 MiB/s | 554.0 KiB | 00m00s [54/57] Installing python3-docutils-0:0 100% | 134.9 MiB/s | 5.0 MiB | 00m00s [55/57] Installing python3-connection_p 100% | 23.1 MiB/s | 23.7 KiB | 00m00s [56/57] Installing python3-appdirs-0:1. 100% | 0.0 B/s | 70.0 KiB | 00m00s [57/57] Installing python3-snakemake-in 100% | 449.1 KiB/s | 39.5 KiB | 00m00s Warning: skipped OpenPGP checks for 54 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1742515200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.4Trzvg + umask 022 + cd /builddir/build/BUILD/snakemake-8.30.0-build + cd snakemake-8.30.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir + RPM_TOXENV=py313 + FEDORA=43 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 74.1.3) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/snakemake-8.30.0.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: immutables (installed: immutables 0.21) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.21.2) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.43) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.6) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.23.0) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.10.4) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 24.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 6.1.1) Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp <2.10,>=2.3.1 (installed: pulp 2.9.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.2) Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests <3.0,>=2.8.1 (installed: requests 2.32.3) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open <8.0,>=4.0 (installed: smart-open 7.1.0) Handling snakemake-interface-executor-plugins <10.0,>=9.3.2 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.3.2 (installed: snakemake-interface-executor-plugins 9.3.3) Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0 (installed: snakemake-interface-common 1.17.4) Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3 (installed: snakemake-interface-storage-plugins 3.5.0) Handling snakemake-interface-report-plugins <2.0.0,>=1.1.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-report-plugins <2.0.0,>=1.1.0 (installed: snakemake-interface-report-plugins 1.1.0) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.17.1) Handling yte <2.0,>=1.5.5 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.5 (installed: yte 1.7.0) Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: dpath <3.0.0,>=2.1.6 (installed: dpath 2.2.0) Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: conda-inject <2.0,>=1.3.1 (installed: conda-inject 1.3.2) Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slack-sdk ; extra == 'messaging' (installed: slack-sdk 3.35.0) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.19.1) + cat /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-buildrequires + rm -rfv snakemake-8.30.0.dist-info/ removed 'snakemake-8.30.0.dist-info/entry_points.txt' removed 'snakemake-8.30.0.dist-info/top_level.txt' removed 'snakemake-8.30.0.dist-info/METADATA' removed 'snakemake-8.30.0.dist-info/LICENSE.md' removed directory 'snakemake-8.30.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-8.30.0-1.fc43.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: updates 100% | 11.1 KiB/s | 6.5 KiB | 00m01s fedora 100% | 13.5 KiB/s | 5.5 KiB | 00m00s Copr repository 100% | 3.2 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 5.8 KiB/s | 3.8 KiB | 00m01s Repositories loaded. Package "R-core-4.4.3-1.fc43.s390x" is already installed. Package "environment-modules-5.5.0-3.fc42.s390x" is already installed. Package "graphviz-12.2.1-3.fc42.s390x" is already installed. Package "help2man-1.49.3-7.fc42.noarch" is already installed. Package "pyproject-rpm-macros-1.18.1-1.fc43.noarch" is already installed. Package "python-unversioned-command-3.13.2-2.fc43.noarch" is already installed. Package "python3-devel-3.13.2-2.fc43.s390x" is already installed. Package "python3-appdirs-1.4.4-26.fc42.noarch" is already installed. Package "python3-boto3-1.37.17-1.fc43.noarch" is already installed. Package "python3-configargparse-1.7-6.fc42.noarch" is already installed. Package "python3-connection_pool-0.0.3-14.fc42.noarch" is already installed. Package "python3-docutils-0.21.2-2.fc42.noarch" is already installed. Package "python3-flask-1:3.1.0-3.fc42.noarch" is already installed. Package "python3-GitPython-3.1.43-2.fc42.noarch" is already installed. Package "python3-google-cloud-storage-2.14.0-7.fc42.noarch" is already installed. Package "python3-humanfriendly-10.0-14.fc42.noarch" is already installed. Package "python3-immutables-0.21-2.fc42.s390x" is already installed. Package "python3-jsonschema-4.23.0-2.fc42.noarch" is already installed. Package "python3-nbformat-5.10.4-1.fc43.noarch" is already installed. Package "python3-packaging-24.2-3.fc42.noarch" is already installed. Package "python3-pandas-2.2.3-1.fc42~bootstrap.s390x" is already installed. Package "python3-pip-24.3.1-2.fc42.noarch" is already installed. Package "python3-psutil-6.1.1-2.fc42.s390x" is already installed. Package "python3-pygments-2.19.1-1.fc43.noarch" is already installed. Package "python3-pytest-8.3.5-2.fc43.noarch" is already installed. Package "python3-pytest-mock-3.14.0-3.fc42.noarch" is already installed. Package "python3-pyyaml-6.0.2-2.fc42.s390x" is already installed. Package "python3-reretry-0.11.8-12.fc42.noarch" is already installed. Package "python3-setuptools-74.1.3-5.fc42.noarch" is already installed. Package "python3-slackclient-3.35.0-1.fc43.noarch" is already installed. Package "python3-snakemake-executor-plugin-cluster-generic-1.0.9-5.fc42.noarch" is already installed. Package "python3-snakemake-storage-plugin-fs-1.0.6-3.fc42.noarch" is already installed. Package "python3-snakemake-storage-plugin-http-0.2.3-8.fc42.noarch" is already installed. Package "python3-snakemake-storage-plugin-s3-0.3.1-1.fc43.noarch" is already installed. Package "python3-tabulate-0.9.0-11.fc42.noarch" is already installed. Package "python3-throttler-1.2.2-14.fc42.noarch" is already installed. Package "python3-wrapt-1.17.1-2.fc42.s390x" is already installed. Package "strace-6.13-1.fc42.s390x" is already installed. Package "stress-ng-0.18.11-1.fc43.s390x" is already installed. Package "vim-filesystem-2:9.1.1227-1.fc43.noarch" is already installed. Nothing to do. Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1742515200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.vsyqd6 + umask 022 + cd /builddir/build/BUILD/snakemake-8.30.0-build + cd snakemake-8.30.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir + RPM_TOXENV=py313 + FEDORA=43 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-buildrequires -x reports,messaging Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 74.1.3) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/snakemake-8.30.0.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling immutables from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: immutables (installed: immutables 0.21) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.21.2) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.43) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.6) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.23.0) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.10.4) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 24.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 6.1.1) Handling pulp <2.10,>=2.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp <2.10,>=2.3.1 (installed: pulp 2.9.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.2) Handling requests <3.0,>=2.8.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests <3.0,>=2.8.1 (installed: requests 2.32.3) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open <8.0,>=4.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open <8.0,>=4.0 (installed: smart-open 7.1.0) Handling snakemake-interface-executor-plugins <10.0,>=9.3.2 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-executor-plugins <10.0,>=9.3.2 (installed: snakemake-interface-executor-plugins 9.3.3) Handling snakemake-interface-common <2.0,>=1.17.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-common <2.0,>=1.17.0 (installed: snakemake-interface-common 1.17.4) Handling snakemake-interface-storage-plugins <4.0,>=3.2.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-storage-plugins <4.0,>=3.2.3 (installed: snakemake-interface-storage-plugins 3.5.0) Handling snakemake-interface-report-plugins <2.0.0,>=1.1.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: snakemake-interface-report-plugins <2.0.0,>=1.1.0 (installed: snakemake-interface-report-plugins 1.1.0) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.17.1) Handling yte <2.0,>=1.5.5 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.5 (installed: yte 1.7.0) Handling dpath <3.0.0,>=2.1.6 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: dpath <3.0.0,>=2.1.6 (installed: dpath 2.2.0) Handling conda-inject <2.0,>=1.3.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: conda-inject <2.0,>=1.3.1 (installed: conda-inject 1.3.2) Handling slack-sdk ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slack-sdk ; extra == 'messaging' (installed: slack-sdk 3.35.0) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.19.1) + cat /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-buildrequires + rm -rfv snakemake-8.30.0.dist-info/ removed 'snakemake-8.30.0.dist-info/entry_points.txt' removed 'snakemake-8.30.0.dist-info/top_level.txt' removed 'snakemake-8.30.0.dist-info/METADATA' removed 'snakemake-8.30.0.dist-info/LICENSE.md' removed directory 'snakemake-8.30.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.HGIqEb + umask 022 + cd /builddir/build/BUILD/snakemake-8.30.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.30.0 + mkdir -p /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/pyproject-wheeldir Processing /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir/pip-modern-metadata-tf7ml7y3/snakemake.egg-info writing /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir/pip-modern-metadata-tf7ml7y3/snakemake.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir/pip-modern-metadata-tf7ml7y3/snakemake.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir/pip-modern-metadata-tf7ml7y3/snakemake.egg-info/entry_points.txt writing requirements to /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir/pip-modern-metadata-tf7ml7y3/snakemake.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir/pip-modern-metadata-tf7ml7y3/snakemake.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir/pip-modern-metadata-tf7ml7y3/snakemake.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir/pip-modern-metadata-tf7ml7y3/snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file '/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir/pip-modern-metadata-tf7ml7y3/snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir/pip-modern-metadata-tf7ml7y3/snakemake-8.30.0.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: snakemake Building wheel for snakemake (pyproject.toml): started Running command Building wheel for snakemake (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/snakemake copying snakemake/__init__.py -> build/lib/snakemake copying snakemake/__main__.py -> build/lib/snakemake copying snakemake/_version.py -> build/lib/snakemake copying snakemake/api.py -> build/lib/snakemake copying snakemake/benchmark.py -> build/lib/snakemake copying snakemake/checkpoints.py -> build/lib/snakemake copying snakemake/cli.py -> build/lib/snakemake copying snakemake/cwl.py -> build/lib/snakemake copying snakemake/dag.py -> build/lib/snakemake copying snakemake/decorators.py -> build/lib/snakemake copying snakemake/exceptions.py -> build/lib/snakemake copying snakemake/gui.py -> build/lib/snakemake copying snakemake/io.py -> build/lib/snakemake copying snakemake/ioflags.py -> build/lib/snakemake copying snakemake/jobs.py -> build/lib/snakemake copying snakemake/logging.py -> build/lib/snakemake copying snakemake/modules.py -> build/lib/snakemake copying snakemake/notebook.py -> build/lib/snakemake copying snakemake/output_index.py -> build/lib/snakemake copying snakemake/parser.py -> build/lib/snakemake copying snakemake/path_modifier.py -> build/lib/snakemake copying snakemake/persistence.py -> build/lib/snakemake copying snakemake/profiles.py -> build/lib/snakemake copying snakemake/resources.py -> build/lib/snakemake copying snakemake/ruleinfo.py -> build/lib/snakemake copying snakemake/rules.py -> build/lib/snakemake copying snakemake/scheduler.py -> build/lib/snakemake copying snakemake/shell.py -> build/lib/snakemake copying snakemake/sourcecache.py -> build/lib/snakemake copying snakemake/spawn_jobs.py -> build/lib/snakemake copying snakemake/storage.py -> build/lib/snakemake copying snakemake/target_jobs.py -> build/lib/snakemake copying snakemake/utils.py -> build/lib/snakemake copying snakemake/workflow.py -> build/lib/snakemake copying snakemake/wrapper.py -> build/lib/snakemake creating build/lib/snakemake/assets copying snakemake/assets/__init__.py -> build/lib/snakemake/assets creating build/lib/snakemake/caching copying snakemake/caching/__init__.py -> build/lib/snakemake/caching copying snakemake/caching/hash.py -> build/lib/snakemake/caching copying snakemake/caching/local.py -> build/lib/snakemake/caching copying snakemake/caching/storage.py -> build/lib/snakemake/caching creating build/lib/snakemake/common copying snakemake/common/__init__.py -> build/lib/snakemake/common copying snakemake/common/argparse.py -> build/lib/snakemake/common copying snakemake/common/configfile.py -> build/lib/snakemake/common copying snakemake/common/git.py -> build/lib/snakemake/common copying snakemake/common/prefix_lookup.py -> build/lib/snakemake/common copying snakemake/common/tbdstring.py -> build/lib/snakemake/common copying snakemake/common/typing.py -> build/lib/snakemake/common copying snakemake/common/workdir_handler.py -> build/lib/snakemake/common creating build/lib/snakemake/deployment copying snakemake/deployment/__init__.py -> build/lib/snakemake/deployment copying snakemake/deployment/conda.py -> build/lib/snakemake/deployment copying snakemake/deployment/containerize.py -> build/lib/snakemake/deployment copying snakemake/deployment/env_modules.py -> build/lib/snakemake/deployment copying snakemake/deployment/singularity.py -> build/lib/snakemake/deployment creating build/lib/snakemake/executors copying snakemake/executors/__init__.py -> build/lib/snakemake/executors copying snakemake/executors/dryrun.py -> build/lib/snakemake/executors copying snakemake/executors/local.py -> build/lib/snakemake/executors copying snakemake/executors/touch.py -> build/lib/snakemake/executors copying snakemake/executors/google_lifesciences_helper.py -> build/lib/snakemake/executors creating build/lib/snakemake/ioutils copying snakemake/ioutils/__init__.py -> build/lib/snakemake/ioutils copying snakemake/ioutils/branch.py -> build/lib/snakemake/ioutils copying snakemake/ioutils/collect.py -> build/lib/snakemake/ioutils copying snakemake/ioutils/evaluate.py -> build/lib/snakemake/ioutils copying snakemake/ioutils/exists.py -> build/lib/snakemake/ioutils copying snakemake/ioutils/lookup.py -> build/lib/snakemake/ioutils copying snakemake/ioutils/rule_items_proxy.py -> build/lib/snakemake/ioutils copying snakemake/ioutils/subpath.py -> build/lib/snakemake/ioutils creating build/lib/snakemake/linting copying snakemake/linting/__init__.py -> build/lib/snakemake/linting copying snakemake/linting/links.py -> build/lib/snakemake/linting copying snakemake/linting/rules.py -> build/lib/snakemake/linting copying snakemake/linting/snakefiles.py -> build/lib/snakemake/linting creating build/lib/snakemake/remote copying snakemake/remote/AzBlob.py -> build/lib/snakemake/remote copying snakemake/remote/EGA.py -> build/lib/snakemake/remote copying snakemake/remote/FTP.py -> build/lib/snakemake/remote copying snakemake/remote/GS.py -> build/lib/snakemake/remote copying snakemake/remote/HTTP.py -> build/lib/snakemake/remote copying snakemake/remote/NCBI.py -> build/lib/snakemake/remote copying snakemake/remote/S3.py -> build/lib/snakemake/remote copying snakemake/remote/S3Mocked.py -> build/lib/snakemake/remote copying snakemake/remote/SFTP.py -> build/lib/snakemake/remote copying snakemake/remote/XRootD.py -> build/lib/snakemake/remote copying snakemake/remote/__init__.py -> build/lib/snakemake/remote copying snakemake/remote/dropbox.py -> build/lib/snakemake/remote copying snakemake/remote/gfal.py -> build/lib/snakemake/remote copying snakemake/remote/gridftp.py -> build/lib/snakemake/remote copying snakemake/remote/iRODS.py -> build/lib/snakemake/remote copying snakemake/remote/webdav.py -> build/lib/snakemake/remote copying snakemake/remote/zenodo.py -> build/lib/snakemake/remote creating build/lib/snakemake/report copying snakemake/report/__init__.py -> build/lib/snakemake/report copying snakemake/report/common.py -> build/lib/snakemake/report copying snakemake/report/rulegraph_spec.py -> build/lib/snakemake/report creating build/lib/snakemake/script copying snakemake/script/__init__.py -> build/lib/snakemake/script creating build/lib/snakemake/settings copying snakemake/settings/__init__.py -> build/lib/snakemake/settings copying snakemake/settings/enums.py -> build/lib/snakemake/settings copying snakemake/settings/types.py -> build/lib/snakemake/settings creating build/lib/snakemake/template_rendering copying snakemake/template_rendering/__init__.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/jinja2.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/yte.py -> build/lib/snakemake/template_rendering creating build/lib/snakemake/unit_tests copying snakemake/unit_tests/__init__.py -> build/lib/snakemake/unit_tests creating build/lib/snakemake/common/tests copying snakemake/common/tests/__init__.py -> build/lib/snakemake/common/tests creating build/lib/snakemake/common/tests/testcases copying snakemake/common/tests/testcases/__init__.py -> build/lib/snakemake/common/tests/testcases creating build/lib/snakemake/common/tests/testcases/groups copying snakemake/common/tests/testcases/groups/__init__.py -> build/lib/snakemake/common/tests/testcases/groups creating build/lib/snakemake/common/tests/testcases/simple copying snakemake/common/tests/testcases/simple/__init__.py -> build/lib/snakemake/common/tests/testcases/simple creating build/lib/snakemake/report/html_reporter copying snakemake/report/html_reporter/__init__.py -> build/lib/snakemake/report/html_reporter copying snakemake/report/html_reporter/common.py -> build/lib/snakemake/report/html_reporter creating build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/__init__.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/categories.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/common.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/configfiles.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/packages.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/results.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/rulegraph.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/rules.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/runtimes.py -> build/lib/snakemake/report/html_reporter/data copying snakemake/report/html_reporter/data/timeline.py -> build/lib/snakemake/report/html_reporter/data creating build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/__init__.py -> build/lib/snakemake/report/html_reporter/template creating build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/__init__.py -> build/lib/snakemake/report/html_reporter/template/components creating build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/__init__.py -> build/lib/snakemake/unit_tests/templates running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' writing manifest file 'snakemake.egg-info/SOURCES.txt' /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data' to be distributed and are already explicitly excluding 'snakemake.assets.data' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.clone' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.clone' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.clone' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.clone' to be distributed and are already explicitly excluding 'snakemake.assets.data.clone' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.delaunator' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.delaunator' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.delaunator' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.delaunator' to be distributed and are already explicitly excluding 'snakemake.assets.data.delaunator' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.esprima' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.esprima' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.esprima' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.esprima' to be distributed and are already explicitly excluding 'snakemake.assets.data.esprima' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.fabric' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.fabric' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.fabric' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.fabric' to be distributed and are already explicitly excluding 'snakemake.assets.data.fabric' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.hashlru' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.hashlru' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.hashlru' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.hashlru' to be distributed and are already explicitly excluding 'snakemake.assets.data.hashlru' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.heroicons' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.heroicons' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.heroicons' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.heroicons' to be distributed and are already explicitly excluding 'snakemake.assets.data.heroicons' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.pygments' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.pygments' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.pygments' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.pygments' to be distributed and are already explicitly excluding 'snakemake.assets.data.pygments' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.quickselect' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.quickselect' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.quickselect' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.quickselect' to be distributed and are already explicitly excluding 'snakemake.assets.data.quickselect' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.react' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.react' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.react' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.react' to be distributed and are already explicitly excluding 'snakemake.assets.data.react' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.regression' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.regression' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.regression' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.regression' to be distributed and are already explicitly excluding 'snakemake.assets.data.regression' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.science' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.science' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.science' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.science' to be distributed and are already explicitly excluding 'snakemake.assets.data.science' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.semver' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.semver' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.semver' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.semver' to be distributed and are already explicitly excluding 'snakemake.assets.data.semver' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.shapefile' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.shapefile' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.shapefile' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.shapefile' to be distributed and are already explicitly excluding 'snakemake.assets.data.shapefile' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.snakemake' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.snakemake' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.snakemake' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.snakemake' to be distributed and are already explicitly excluding 'snakemake.assets.data.snakemake' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.tailwindcss' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.tailwindcss' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.tailwindcss' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.tailwindcss' to be distributed and are already explicitly excluding 'snakemake.assets.data.tailwindcss' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:218: _Warning: Package 'snakemake.assets.data.vega' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'snakemake.assets.data.vega' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'snakemake.assets.data.vega' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'snakemake.assets.data.vega' to be distributed and are already explicitly excluding 'snakemake.assets.data.vega' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) creating build/lib/snakemake/assets/data creating build/lib/snakemake/assets/data/@types-clone copying snakemake/assets/data/@types-clone/LICENSE -> build/lib/snakemake/assets/data/@types-clone creating build/lib/snakemake/assets/data/@types-estree copying snakemake/assets/data/@types-estree/LICENSE -> build/lib/snakemake/assets/data/@types-estree creating build/lib/snakemake/assets/data/clone copying snakemake/assets/data/clone/LICENSE -> build/lib/snakemake/assets/data/clone creating build/lib/snakemake/assets/data/commons-math copying snakemake/assets/data/commons-math/LICENSE.txt -> build/lib/snakemake/assets/data/commons-math copying snakemake/assets/data/commons-math/NOTICE.txt -> build/lib/snakemake/assets/data/commons-math creating build/lib/snakemake/assets/data/d3-array copying snakemake/assets/data/d3-array/LICENSE -> build/lib/snakemake/assets/data/d3-array creating build/lib/snakemake/assets/data/d3-color copying snakemake/assets/data/d3-color/LICENSE -> build/lib/snakemake/assets/data/d3-color creating build/lib/snakemake/assets/data/d3-contour copying snakemake/assets/data/d3-contour/LICENSE -> build/lib/snakemake/assets/data/d3-contour creating build/lib/snakemake/assets/data/d3-delaunay copying snakemake/assets/data/d3-delaunay/LICENSE -> build/lib/snakemake/assets/data/d3-delaunay creating build/lib/snakemake/assets/data/d3-dispatch copying snakemake/assets/data/d3-dispatch/LICENSE -> build/lib/snakemake/assets/data/d3-dispatch creating build/lib/snakemake/assets/data/d3-dsv copying snakemake/assets/data/d3-dsv/LICENSE -> build/lib/snakemake/assets/data/d3-dsv creating build/lib/snakemake/assets/data/d3-force copying snakemake/assets/data/d3-force/LICENSE -> build/lib/snakemake/assets/data/d3-force creating build/lib/snakemake/assets/data/d3-format copying snakemake/assets/data/d3-format/LICENSE -> build/lib/snakemake/assets/data/d3-format creating build/lib/snakemake/assets/data/d3-geo copying snakemake/assets/data/d3-geo/LICENSE -> build/lib/snakemake/assets/data/d3-geo creating build/lib/snakemake/assets/data/d3-geo-projection copying snakemake/assets/data/d3-geo-projection/LICENSE -> build/lib/snakemake/assets/data/d3-geo-projection creating build/lib/snakemake/assets/data/d3-hierarchy copying snakemake/assets/data/d3-hierarchy/LICENSE -> build/lib/snakemake/assets/data/d3-hierarchy creating build/lib/snakemake/assets/data/d3-interpolate copying snakemake/assets/data/d3-interpolate/LICENSE -> build/lib/snakemake/assets/data/d3-interpolate creating build/lib/snakemake/assets/data/d3-path copying snakemake/assets/data/d3-path/LICENSE -> build/lib/snakemake/assets/data/d3-path creating build/lib/snakemake/assets/data/d3-quadtree copying snakemake/assets/data/d3-quadtree/LICENSE -> build/lib/snakemake/assets/data/d3-quadtree creating build/lib/snakemake/assets/data/d3-regression copying snakemake/assets/data/d3-regression/LICENSE -> build/lib/snakemake/assets/data/d3-regression creating build/lib/snakemake/assets/data/d3-scale copying snakemake/assets/data/d3-scale/LICENSE -> build/lib/snakemake/assets/data/d3-scale creating build/lib/snakemake/assets/data/d3-shape copying snakemake/assets/data/d3-shape/LICENSE -> build/lib/snakemake/assets/data/d3-shape creating build/lib/snakemake/assets/data/d3-time copying snakemake/assets/data/d3-time/LICENSE -> build/lib/snakemake/assets/data/d3-time creating build/lib/snakemake/assets/data/d3-time-format copying snakemake/assets/data/d3-time-format/LICENSE -> build/lib/snakemake/assets/data/d3-time-format creating build/lib/snakemake/assets/data/d3-timer copying snakemake/assets/data/d3-timer/LICENSE -> build/lib/snakemake/assets/data/d3-timer creating build/lib/snakemake/assets/data/delaunator copying snakemake/assets/data/delaunator/LICENSE -> build/lib/snakemake/assets/data/delaunator creating build/lib/snakemake/assets/data/esprima copying snakemake/assets/data/esprima/LICENSE.BSD -> build/lib/snakemake/assets/data/esprima creating build/lib/snakemake/assets/data/fabric copying snakemake/assets/data/fabric/LICENSE -> build/lib/snakemake/assets/data/fabric creating build/lib/snakemake/assets/data/fast-deep-equal copying snakemake/assets/data/fast-deep-equal/LICENSE -> build/lib/snakemake/assets/data/fast-deep-equal creating build/lib/snakemake/assets/data/fast-json-patch copying snakemake/assets/data/fast-json-patch/LICENSE -> build/lib/snakemake/assets/data/fast-json-patch creating build/lib/snakemake/assets/data/fast-json-stable-stringify copying snakemake/assets/data/fast-json-stable-stringify/LICENSE -> build/lib/snakemake/assets/data/fast-json-stable-stringify creating build/lib/snakemake/assets/data/hashlru copying snakemake/assets/data/hashlru/LICENSE -> build/lib/snakemake/assets/data/hashlru creating build/lib/snakemake/assets/data/heroicons copying snakemake/assets/data/heroicons/LICENSE -> build/lib/snakemake/assets/data/heroicons creating build/lib/snakemake/assets/data/json-stringify-pretty-compact copying snakemake/assets/data/json-stringify-pretty-compact/LICENSE -> build/lib/snakemake/assets/data/json-stringify-pretty-compact creating build/lib/snakemake/assets/data/prop-types copying snakemake/assets/data/prop-types/LICENSE -> build/lib/snakemake/assets/data/prop-types copying snakemake/assets/data/prop-types/prop-types.min.js -> build/lib/snakemake/assets/data/prop-types creating build/lib/snakemake/assets/data/pygments copying snakemake/assets/data/pygments/LICENSE -> build/lib/snakemake/assets/data/pygments creating build/lib/snakemake/assets/data/quickselect copying snakemake/assets/data/quickselect/LICENSE -> build/lib/snakemake/assets/data/quickselect creating build/lib/snakemake/assets/data/react copying snakemake/assets/data/react/LICENSE -> build/lib/snakemake/assets/data/react copying snakemake/assets/data/react/react-dom.production.min.js -> build/lib/snakemake/assets/data/react copying snakemake/assets/data/react/react.production.min.js -> build/lib/snakemake/assets/data/react creating build/lib/snakemake/assets/data/regression copying snakemake/assets/data/regression/LICENSE -> build/lib/snakemake/assets/data/regression creating build/lib/snakemake/assets/data/science copying snakemake/assets/data/science/LICENSE -> build/lib/snakemake/assets/data/science creating build/lib/snakemake/assets/data/semver copying snakemake/assets/data/semver/LICENSE -> build/lib/snakemake/assets/data/semver creating build/lib/snakemake/assets/data/shapefile copying snakemake/assets/data/shapefile/LICENSE -> build/lib/snakemake/assets/data/shapefile creating build/lib/snakemake/assets/data/snakemake copying snakemake/assets/data/snakemake/LICENSE.md -> build/lib/snakemake/assets/data/snakemake creating build/lib/snakemake/assets/data/tailwindcss copying snakemake/assets/data/tailwindcss/LICENSE -> build/lib/snakemake/assets/data/tailwindcss copying snakemake/assets/data/tailwindcss/tailwind.css -> build/lib/snakemake/assets/data/tailwindcss creating build/lib/snakemake/assets/data/topojson-client copying snakemake/assets/data/topojson-client/LICENSE -> build/lib/snakemake/assets/data/topojson-client creating build/lib/snakemake/assets/data/vega copying snakemake/assets/data/vega/LICENSE -> build/lib/snakemake/assets/data/vega copying snakemake/assets/data/vega/vega.js -> build/lib/snakemake/assets/data/vega creating build/lib/snakemake/assets/data/vega-embed copying snakemake/assets/data/vega-embed/LICENSE -> build/lib/snakemake/assets/data/vega-embed copying snakemake/assets/data/vega-embed/vega-embed.js -> build/lib/snakemake/assets/data/vega-embed creating build/lib/snakemake/assets/data/vega-lite copying snakemake/assets/data/vega-lite/LICENSE -> build/lib/snakemake/assets/data/vega-lite copying snakemake/assets/data/vega-lite/vega-lite.js -> build/lib/snakemake/assets/data/vega-lite creating build/lib/snakemake/assets/data/vega-schema-url-parser copying snakemake/assets/data/vega-schema-url-parser/LICENSE -> build/lib/snakemake/assets/data/vega-schema-url-parser creating build/lib/snakemake/assets/data/vega-themes copying snakemake/assets/data/vega-themes/LICENSE -> build/lib/snakemake/assets/data/vega-themes creating build/lib/snakemake/assets/data/vega-tooltip copying snakemake/assets/data/vega-tooltip/LICENSE -> build/lib/snakemake/assets/data/vega-tooltip copying snakemake/report/html_reporter/template/index.html.jinja2 -> build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/logo.svg -> build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/style.css -> build/lib/snakemake/report/html_reporter/template copying snakemake/report/html_reporter/template/components/abstract_menu.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/abstract_results.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/abstract_view_manager.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/app.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/breadcrumbs.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/button.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/category.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/common.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/content.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/icon.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/list_heading.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/list_item.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/menu.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/navbar.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/report_info.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/result_info.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/result_view_button.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/rule_graph.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/rule_info.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/search_results.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/stats.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/subcategory.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/report/html_reporter/template/components/toggle.js -> build/lib/snakemake/report/html_reporter/template/components copying snakemake/common/tests/testcases/groups/Snakefile -> build/lib/snakemake/common/tests/testcases/groups copying snakemake/common/tests/testcases/groups/caption.rst -> build/lib/snakemake/common/tests/testcases/groups copying snakemake/common/tests/testcases/simple/Snakefile -> build/lib/snakemake/common/tests/testcases/simple copying snakemake/common/tests/testcases/simple/caption.rst -> build/lib/snakemake/common/tests/testcases/simple copying snakemake/unit_tests/templates/common.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/lib/snakemake/unit_tests/templates UPDATING build/lib/snakemake/_version.py set build/lib/snakemake/_version.py to '8.30.0' installing to build/bdist.linux-s390x/wheel running install running install_lib creating build/bdist.linux-s390x creating build/bdist.linux-s390x/wheel creating build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/__main__.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/api.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/benchmark.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/checkpoints.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/cli.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/cwl.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/dag.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/decorators.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/exceptions.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/gui.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/io.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/ioflags.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/jobs.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/logging.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/modules.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/notebook.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/output_index.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/parser.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/path_modifier.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/persistence.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/profiles.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/resources.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/ruleinfo.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/rules.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/scheduler.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/shell.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/sourcecache.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/spawn_jobs.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/storage.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/target_jobs.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/utils.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/workflow.py -> build/bdist.linux-s390x/wheel/./snakemake copying build/lib/snakemake/wrapper.py -> build/bdist.linux-s390x/wheel/./snakemake creating build/bdist.linux-s390x/wheel/snakemake/assets copying build/lib/snakemake/assets/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/assets creating build/bdist.linux-s390x/wheel/snakemake/assets/data creating build/bdist.linux-s390x/wheel/snakemake/assets/data/@types-clone copying build/lib/snakemake/assets/data/@types-clone/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/@types-clone creating build/bdist.linux-s390x/wheel/snakemake/assets/data/@types-estree copying build/lib/snakemake/assets/data/@types-estree/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/@types-estree creating build/bdist.linux-s390x/wheel/snakemake/assets/data/clone copying build/lib/snakemake/assets/data/clone/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/clone creating build/bdist.linux-s390x/wheel/snakemake/assets/data/commons-math copying build/lib/snakemake/assets/data/commons-math/LICENSE.txt -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/commons-math copying build/lib/snakemake/assets/data/commons-math/NOTICE.txt -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/commons-math creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-array copying build/lib/snakemake/assets/data/d3-array/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-array creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-color copying build/lib/snakemake/assets/data/d3-color/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-color creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-contour copying build/lib/snakemake/assets/data/d3-contour/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-contour creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-delaunay copying build/lib/snakemake/assets/data/d3-delaunay/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-delaunay creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-dispatch copying build/lib/snakemake/assets/data/d3-dispatch/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-dispatch creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-dsv copying build/lib/snakemake/assets/data/d3-dsv/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-dsv creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-force copying build/lib/snakemake/assets/data/d3-force/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-force creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-format copying build/lib/snakemake/assets/data/d3-format/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-format creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-geo copying build/lib/snakemake/assets/data/d3-geo/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-geo creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-geo-projection copying build/lib/snakemake/assets/data/d3-geo-projection/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-geo-projection creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-hierarchy copying build/lib/snakemake/assets/data/d3-hierarchy/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-hierarchy creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-interpolate copying build/lib/snakemake/assets/data/d3-interpolate/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-interpolate creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-path copying build/lib/snakemake/assets/data/d3-path/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-path creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-quadtree copying build/lib/snakemake/assets/data/d3-quadtree/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-quadtree creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-regression copying build/lib/snakemake/assets/data/d3-regression/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-regression creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-scale copying build/lib/snakemake/assets/data/d3-scale/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-scale creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-shape copying build/lib/snakemake/assets/data/d3-shape/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-shape creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-time copying build/lib/snakemake/assets/data/d3-time/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-time creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-time-format copying build/lib/snakemake/assets/data/d3-time-format/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-time-format creating build/bdist.linux-s390x/wheel/snakemake/assets/data/d3-timer copying build/lib/snakemake/assets/data/d3-timer/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/d3-timer creating build/bdist.linux-s390x/wheel/snakemake/assets/data/delaunator copying build/lib/snakemake/assets/data/delaunator/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/delaunator creating build/bdist.linux-s390x/wheel/snakemake/assets/data/esprima copying build/lib/snakemake/assets/data/esprima/LICENSE.BSD -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/esprima creating build/bdist.linux-s390x/wheel/snakemake/assets/data/fabric copying build/lib/snakemake/assets/data/fabric/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/fabric creating build/bdist.linux-s390x/wheel/snakemake/assets/data/fast-deep-equal copying build/lib/snakemake/assets/data/fast-deep-equal/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/fast-deep-equal creating build/bdist.linux-s390x/wheel/snakemake/assets/data/fast-json-patch copying build/lib/snakemake/assets/data/fast-json-patch/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/fast-json-patch creating build/bdist.linux-s390x/wheel/snakemake/assets/data/fast-json-stable-stringify copying build/lib/snakemake/assets/data/fast-json-stable-stringify/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/fast-json-stable-stringify creating build/bdist.linux-s390x/wheel/snakemake/assets/data/hashlru copying build/lib/snakemake/assets/data/hashlru/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/hashlru creating build/bdist.linux-s390x/wheel/snakemake/assets/data/heroicons copying build/lib/snakemake/assets/data/heroicons/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/heroicons creating build/bdist.linux-s390x/wheel/snakemake/assets/data/json-stringify-pretty-compact copying build/lib/snakemake/assets/data/json-stringify-pretty-compact/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/json-stringify-pretty-compact creating build/bdist.linux-s390x/wheel/snakemake/assets/data/prop-types copying build/lib/snakemake/assets/data/prop-types/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/prop-types copying build/lib/snakemake/assets/data/prop-types/prop-types.min.js -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/prop-types creating build/bdist.linux-s390x/wheel/snakemake/assets/data/pygments copying build/lib/snakemake/assets/data/pygments/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/pygments creating build/bdist.linux-s390x/wheel/snakemake/assets/data/quickselect copying build/lib/snakemake/assets/data/quickselect/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/quickselect creating build/bdist.linux-s390x/wheel/snakemake/assets/data/react copying build/lib/snakemake/assets/data/react/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/react copying build/lib/snakemake/assets/data/react/react-dom.production.min.js -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/react copying build/lib/snakemake/assets/data/react/react.production.min.js -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/react creating build/bdist.linux-s390x/wheel/snakemake/assets/data/regression copying build/lib/snakemake/assets/data/regression/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/regression creating build/bdist.linux-s390x/wheel/snakemake/assets/data/science copying build/lib/snakemake/assets/data/science/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/science creating build/bdist.linux-s390x/wheel/snakemake/assets/data/semver copying build/lib/snakemake/assets/data/semver/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/semver creating build/bdist.linux-s390x/wheel/snakemake/assets/data/shapefile copying build/lib/snakemake/assets/data/shapefile/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/shapefile creating build/bdist.linux-s390x/wheel/snakemake/assets/data/snakemake copying build/lib/snakemake/assets/data/snakemake/LICENSE.md -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/snakemake creating build/bdist.linux-s390x/wheel/snakemake/assets/data/tailwindcss copying build/lib/snakemake/assets/data/tailwindcss/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/tailwindcss copying build/lib/snakemake/assets/data/tailwindcss/tailwind.css -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/tailwindcss creating build/bdist.linux-s390x/wheel/snakemake/assets/data/topojson-client copying build/lib/snakemake/assets/data/topojson-client/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/topojson-client creating build/bdist.linux-s390x/wheel/snakemake/assets/data/vega copying build/lib/snakemake/assets/data/vega/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/vega copying build/lib/snakemake/assets/data/vega/vega.js -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/vega creating build/bdist.linux-s390x/wheel/snakemake/assets/data/vega-embed copying build/lib/snakemake/assets/data/vega-embed/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/vega-embed copying build/lib/snakemake/assets/data/vega-embed/vega-embed.js -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/vega-embed creating build/bdist.linux-s390x/wheel/snakemake/assets/data/vega-lite copying build/lib/snakemake/assets/data/vega-lite/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/vega-lite copying build/lib/snakemake/assets/data/vega-lite/vega-lite.js -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/vega-lite creating build/bdist.linux-s390x/wheel/snakemake/assets/data/vega-schema-url-parser copying build/lib/snakemake/assets/data/vega-schema-url-parser/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/vega-schema-url-parser creating build/bdist.linux-s390x/wheel/snakemake/assets/data/vega-themes copying build/lib/snakemake/assets/data/vega-themes/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/vega-themes creating build/bdist.linux-s390x/wheel/snakemake/assets/data/vega-tooltip copying build/lib/snakemake/assets/data/vega-tooltip/LICENSE -> build/bdist.linux-s390x/wheel/./snakemake/assets/data/vega-tooltip creating build/bdist.linux-s390x/wheel/snakemake/caching copying build/lib/snakemake/caching/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/caching copying build/lib/snakemake/caching/hash.py -> build/bdist.linux-s390x/wheel/./snakemake/caching copying build/lib/snakemake/caching/local.py -> build/bdist.linux-s390x/wheel/./snakemake/caching copying build/lib/snakemake/caching/storage.py -> build/bdist.linux-s390x/wheel/./snakemake/caching creating build/bdist.linux-s390x/wheel/snakemake/common copying build/lib/snakemake/common/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/common copying build/lib/snakemake/common/argparse.py -> build/bdist.linux-s390x/wheel/./snakemake/common copying build/lib/snakemake/common/configfile.py -> build/bdist.linux-s390x/wheel/./snakemake/common copying build/lib/snakemake/common/git.py -> build/bdist.linux-s390x/wheel/./snakemake/common copying build/lib/snakemake/common/prefix_lookup.py -> build/bdist.linux-s390x/wheel/./snakemake/common copying build/lib/snakemake/common/tbdstring.py -> build/bdist.linux-s390x/wheel/./snakemake/common copying build/lib/snakemake/common/typing.py -> build/bdist.linux-s390x/wheel/./snakemake/common copying build/lib/snakemake/common/workdir_handler.py -> build/bdist.linux-s390x/wheel/./snakemake/common creating build/bdist.linux-s390x/wheel/snakemake/common/tests copying build/lib/snakemake/common/tests/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/common/tests creating build/bdist.linux-s390x/wheel/snakemake/common/tests/testcases copying build/lib/snakemake/common/tests/testcases/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/common/tests/testcases creating build/bdist.linux-s390x/wheel/snakemake/common/tests/testcases/groups copying build/lib/snakemake/common/tests/testcases/groups/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/common/tests/testcases/groups copying build/lib/snakemake/common/tests/testcases/groups/Snakefile -> build/bdist.linux-s390x/wheel/./snakemake/common/tests/testcases/groups copying build/lib/snakemake/common/tests/testcases/groups/caption.rst -> build/bdist.linux-s390x/wheel/./snakemake/common/tests/testcases/groups creating build/bdist.linux-s390x/wheel/snakemake/common/tests/testcases/simple copying build/lib/snakemake/common/tests/testcases/simple/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/common/tests/testcases/simple copying build/lib/snakemake/common/tests/testcases/simple/Snakefile -> build/bdist.linux-s390x/wheel/./snakemake/common/tests/testcases/simple copying build/lib/snakemake/common/tests/testcases/simple/caption.rst -> build/bdist.linux-s390x/wheel/./snakemake/common/tests/testcases/simple creating build/bdist.linux-s390x/wheel/snakemake/deployment copying build/lib/snakemake/deployment/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/deployment copying build/lib/snakemake/deployment/conda.py -> build/bdist.linux-s390x/wheel/./snakemake/deployment copying build/lib/snakemake/deployment/containerize.py -> build/bdist.linux-s390x/wheel/./snakemake/deployment copying build/lib/snakemake/deployment/env_modules.py -> build/bdist.linux-s390x/wheel/./snakemake/deployment copying build/lib/snakemake/deployment/singularity.py -> build/bdist.linux-s390x/wheel/./snakemake/deployment creating build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/executors copying build/lib/snakemake/executors/dryrun.py -> build/bdist.linux-s390x/wheel/./snakemake/executors copying build/lib/snakemake/executors/local.py -> build/bdist.linux-s390x/wheel/./snakemake/executors copying build/lib/snakemake/executors/touch.py -> build/bdist.linux-s390x/wheel/./snakemake/executors copying build/lib/snakemake/executors/google_lifesciences_helper.py -> build/bdist.linux-s390x/wheel/./snakemake/executors creating build/bdist.linux-s390x/wheel/snakemake/ioutils copying build/lib/snakemake/ioutils/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/ioutils copying build/lib/snakemake/ioutils/branch.py -> build/bdist.linux-s390x/wheel/./snakemake/ioutils copying build/lib/snakemake/ioutils/collect.py -> build/bdist.linux-s390x/wheel/./snakemake/ioutils copying build/lib/snakemake/ioutils/evaluate.py -> build/bdist.linux-s390x/wheel/./snakemake/ioutils copying build/lib/snakemake/ioutils/exists.py -> build/bdist.linux-s390x/wheel/./snakemake/ioutils copying build/lib/snakemake/ioutils/lookup.py -> build/bdist.linux-s390x/wheel/./snakemake/ioutils copying build/lib/snakemake/ioutils/rule_items_proxy.py -> build/bdist.linux-s390x/wheel/./snakemake/ioutils copying build/lib/snakemake/ioutils/subpath.py -> build/bdist.linux-s390x/wheel/./snakemake/ioutils creating build/bdist.linux-s390x/wheel/snakemake/linting copying build/lib/snakemake/linting/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/linting copying build/lib/snakemake/linting/links.py -> build/bdist.linux-s390x/wheel/./snakemake/linting copying build/lib/snakemake/linting/rules.py -> build/bdist.linux-s390x/wheel/./snakemake/linting copying build/lib/snakemake/linting/snakefiles.py -> build/bdist.linux-s390x/wheel/./snakemake/linting creating build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/AzBlob.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/EGA.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/FTP.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/GS.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/HTTP.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/NCBI.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/S3.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/S3Mocked.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/SFTP.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/XRootD.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/dropbox.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/gfal.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/gridftp.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/iRODS.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/webdav.py -> build/bdist.linux-s390x/wheel/./snakemake/remote copying build/lib/snakemake/remote/zenodo.py -> build/bdist.linux-s390x/wheel/./snakemake/remote creating build/bdist.linux-s390x/wheel/snakemake/report copying build/lib/snakemake/report/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/report copying build/lib/snakemake/report/common.py -> build/bdist.linux-s390x/wheel/./snakemake/report copying build/lib/snakemake/report/rulegraph_spec.py -> build/bdist.linux-s390x/wheel/./snakemake/report creating build/bdist.linux-s390x/wheel/snakemake/report/html_reporter copying build/lib/snakemake/report/html_reporter/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter copying build/lib/snakemake/report/html_reporter/common.py -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter creating build/bdist.linux-s390x/wheel/snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/categories.py -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/common.py -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/configfiles.py -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/packages.py -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/results.py -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/rulegraph.py -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/rules.py -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/runtimes.py -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/data copying build/lib/snakemake/report/html_reporter/data/timeline.py -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/data creating build/bdist.linux-s390x/wheel/snakemake/report/html_reporter/template copying build/lib/snakemake/report/html_reporter/template/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template creating build/bdist.linux-s390x/wheel/snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/abstract_menu.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/abstract_results.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/abstract_view_manager.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/app.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/breadcrumbs.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/button.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/category.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/common.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/content.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/icon.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/list_heading.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/list_item.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/menu.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/navbar.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/report_info.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/result_info.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/result_view_button.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/rule_graph.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/rule_info.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/search_results.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/stats.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/subcategory.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/components/toggle.js -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template/components copying build/lib/snakemake/report/html_reporter/template/index.html.jinja2 -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template copying build/lib/snakemake/report/html_reporter/template/logo.svg -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template copying build/lib/snakemake/report/html_reporter/template/style.css -> build/bdist.linux-s390x/wheel/./snakemake/report/html_reporter/template creating build/bdist.linux-s390x/wheel/snakemake/script copying build/lib/snakemake/script/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/script creating build/bdist.linux-s390x/wheel/snakemake/settings copying build/lib/snakemake/settings/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/settings copying build/lib/snakemake/settings/enums.py -> build/bdist.linux-s390x/wheel/./snakemake/settings copying build/lib/snakemake/settings/types.py -> build/bdist.linux-s390x/wheel/./snakemake/settings creating build/bdist.linux-s390x/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/template_rendering copying build/lib/snakemake/template_rendering/jinja2.py -> build/bdist.linux-s390x/wheel/./snakemake/template_rendering copying build/lib/snakemake/template_rendering/yte.py -> build/bdist.linux-s390x/wheel/./snakemake/template_rendering creating build/bdist.linux-s390x/wheel/snakemake/unit_tests copying build/lib/snakemake/unit_tests/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/unit_tests creating build/bdist.linux-s390x/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/__init__.py -> build/bdist.linux-s390x/wheel/./snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/common.py.jinja2 -> build/bdist.linux-s390x/wheel/./snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/bdist.linux-s390x/wheel/./snakemake/unit_tests/templates copying build/lib/snakemake/_version.py -> build/bdist.linux-s390x/wheel/./snakemake running install_egg_info Copying snakemake.egg-info to build/bdist.linux-s390x/wheel/./snakemake-8.30.0-py3.13.egg-info running install_scripts creating build/bdist.linux-s390x/wheel/snakemake-8.30.0.dist-info/WHEEL creating '/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir/pip-wheel-vn3bndjj/.tmp-91zmvfzk/snakemake-8.30.0-py3-none-any.whl' and adding 'build/bdist.linux-s390x/wheel' to it adding 'snakemake/__init__.py' adding 'snakemake/__main__.py' adding 'snakemake/_version.py' adding 'snakemake/api.py' adding 'snakemake/benchmark.py' adding 'snakemake/checkpoints.py' adding 'snakemake/cli.py' adding 'snakemake/cwl.py' adding 'snakemake/dag.py' adding 'snakemake/decorators.py' adding 'snakemake/exceptions.py' adding 'snakemake/gui.py' adding 'snakemake/io.py' adding 'snakemake/ioflags.py' adding 'snakemake/jobs.py' adding 'snakemake/logging.py' adding 'snakemake/modules.py' adding 'snakemake/notebook.py' adding 'snakemake/output_index.py' adding 'snakemake/parser.py' adding 'snakemake/path_modifier.py' adding 'snakemake/persistence.py' adding 'snakemake/profiles.py' adding 'snakemake/resources.py' adding 'snakemake/ruleinfo.py' adding 'snakemake/rules.py' adding 'snakemake/scheduler.py' adding 'snakemake/shell.py' adding 'snakemake/sourcecache.py' adding 'snakemake/spawn_jobs.py' adding 'snakemake/storage.py' adding 'snakemake/target_jobs.py' adding 'snakemake/utils.py' adding 'snakemake/workflow.py' adding 'snakemake/wrapper.py' adding 'snakemake/assets/__init__.py' adding 'snakemake/assets/data/@types-clone/LICENSE' adding 'snakemake/assets/data/@types-estree/LICENSE' adding 'snakemake/assets/data/clone/LICENSE' adding 'snakemake/assets/data/commons-math/LICENSE.txt' adding 'snakemake/assets/data/commons-math/NOTICE.txt' adding 'snakemake/assets/data/d3-array/LICENSE' adding 'snakemake/assets/data/d3-color/LICENSE' adding 'snakemake/assets/data/d3-contour/LICENSE' adding 'snakemake/assets/data/d3-delaunay/LICENSE' adding 'snakemake/assets/data/d3-dispatch/LICENSE' adding 'snakemake/assets/data/d3-dsv/LICENSE' adding 'snakemake/assets/data/d3-force/LICENSE' adding 'snakemake/assets/data/d3-format/LICENSE' adding 'snakemake/assets/data/d3-geo/LICENSE' adding 'snakemake/assets/data/d3-geo-projection/LICENSE' adding 'snakemake/assets/data/d3-hierarchy/LICENSE' adding 'snakemake/assets/data/d3-interpolate/LICENSE' adding 'snakemake/assets/data/d3-path/LICENSE' adding 'snakemake/assets/data/d3-quadtree/LICENSE' adding 'snakemake/assets/data/d3-regression/LICENSE' adding 'snakemake/assets/data/d3-scale/LICENSE' adding 'snakemake/assets/data/d3-shape/LICENSE' adding 'snakemake/assets/data/d3-time/LICENSE' adding 'snakemake/assets/data/d3-time-format/LICENSE' adding 'snakemake/assets/data/d3-timer/LICENSE' adding 'snakemake/assets/data/delaunator/LICENSE' adding 'snakemake/assets/data/esprima/LICENSE.BSD' adding 'snakemake/assets/data/fabric/LICENSE' adding 'snakemake/assets/data/fast-deep-equal/LICENSE' adding 'snakemake/assets/data/fast-json-patch/LICENSE' adding 'snakemake/assets/data/fast-json-stable-stringify/LICENSE' adding 'snakemake/assets/data/hashlru/LICENSE' adding 'snakemake/assets/data/heroicons/LICENSE' adding 'snakemake/assets/data/json-stringify-pretty-compact/LICENSE' adding 'snakemake/assets/data/prop-types/LICENSE' adding 'snakemake/assets/data/prop-types/prop-types.min.js' adding 'snakemake/assets/data/pygments/LICENSE' adding 'snakemake/assets/data/quickselect/LICENSE' adding 'snakemake/assets/data/react/LICENSE' adding 'snakemake/assets/data/react/react-dom.production.min.js' adding 'snakemake/assets/data/react/react.production.min.js' adding 'snakemake/assets/data/regression/LICENSE' adding 'snakemake/assets/data/science/LICENSE' adding 'snakemake/assets/data/semver/LICENSE' adding 'snakemake/assets/data/shapefile/LICENSE' adding 'snakemake/assets/data/snakemake/LICENSE.md' adding 'snakemake/assets/data/tailwindcss/LICENSE' adding 'snakemake/assets/data/tailwindcss/tailwind.css' adding 'snakemake/assets/data/topojson-client/LICENSE' adding 'snakemake/assets/data/vega/LICENSE' adding 'snakemake/assets/data/vega/vega.js' adding 'snakemake/assets/data/vega-embed/LICENSE' adding 'snakemake/assets/data/vega-embed/vega-embed.js' adding 'snakemake/assets/data/vega-lite/LICENSE' adding 'snakemake/assets/data/vega-lite/vega-lite.js' adding 'snakemake/assets/data/vega-schema-url-parser/LICENSE' adding 'snakemake/assets/data/vega-themes/LICENSE' adding 'snakemake/assets/data/vega-tooltip/LICENSE' adding 'snakemake/caching/__init__.py' adding 'snakemake/caching/hash.py' adding 'snakemake/caching/local.py' adding 'snakemake/caching/storage.py' adding 'snakemake/common/__init__.py' adding 'snakemake/common/argparse.py' adding 'snakemake/common/configfile.py' adding 'snakemake/common/git.py' adding 'snakemake/common/prefix_lookup.py' adding 'snakemake/common/tbdstring.py' adding 'snakemake/common/typing.py' adding 'snakemake/common/workdir_handler.py' adding 'snakemake/common/tests/__init__.py' adding 'snakemake/common/tests/testcases/__init__.py' adding 'snakemake/common/tests/testcases/groups/Snakefile' adding 'snakemake/common/tests/testcases/groups/__init__.py' adding 'snakemake/common/tests/testcases/groups/caption.rst' adding 'snakemake/common/tests/testcases/simple/Snakefile' adding 'snakemake/common/tests/testcases/simple/__init__.py' adding 'snakemake/common/tests/testcases/simple/caption.rst' adding 'snakemake/deployment/__init__.py' adding 'snakemake/deployment/conda.py' adding 'snakemake/deployment/containerize.py' adding 'snakemake/deployment/env_modules.py' adding 'snakemake/deployment/singularity.py' adding 'snakemake/executors/__init__.py' adding 'snakemake/executors/dryrun.py' adding 'snakemake/executors/google_lifesciences_helper.py' adding 'snakemake/executors/local.py' adding 'snakemake/executors/touch.py' adding 'snakemake/ioutils/__init__.py' adding 'snakemake/ioutils/branch.py' adding 'snakemake/ioutils/collect.py' adding 'snakemake/ioutils/evaluate.py' adding 'snakemake/ioutils/exists.py' adding 'snakemake/ioutils/lookup.py' adding 'snakemake/ioutils/rule_items_proxy.py' adding 'snakemake/ioutils/subpath.py' adding 'snakemake/linting/__init__.py' adding 'snakemake/linting/links.py' adding 'snakemake/linting/rules.py' adding 'snakemake/linting/snakefiles.py' adding 'snakemake/remote/AzBlob.py' adding 'snakemake/remote/EGA.py' adding 'snakemake/remote/FTP.py' adding 'snakemake/remote/GS.py' adding 'snakemake/remote/HTTP.py' adding 'snakemake/remote/NCBI.py' adding 'snakemake/remote/S3.py' adding 'snakemake/remote/S3Mocked.py' adding 'snakemake/remote/SFTP.py' adding 'snakemake/remote/XRootD.py' adding 'snakemake/remote/__init__.py' adding 'snakemake/remote/dropbox.py' adding 'snakemake/remote/gfal.py' adding 'snakemake/remote/gridftp.py' adding 'snakemake/remote/iRODS.py' adding 'snakemake/remote/webdav.py' adding 'snakemake/remote/zenodo.py' adding 'snakemake/report/__init__.py' adding 'snakemake/report/common.py' adding 'snakemake/report/rulegraph_spec.py' adding 'snakemake/report/html_reporter/__init__.py' adding 'snakemake/report/html_reporter/common.py' adding 'snakemake/report/html_reporter/data/__init__.py' adding 'snakemake/report/html_reporter/data/categories.py' adding 'snakemake/report/html_reporter/data/common.py' adding 'snakemake/report/html_reporter/data/configfiles.py' adding 'snakemake/report/html_reporter/data/packages.py' adding 'snakemake/report/html_reporter/data/results.py' adding 'snakemake/report/html_reporter/data/rulegraph.py' adding 'snakemake/report/html_reporter/data/rules.py' adding 'snakemake/report/html_reporter/data/runtimes.py' adding 'snakemake/report/html_reporter/data/timeline.py' adding 'snakemake/report/html_reporter/template/__init__.py' adding 'snakemake/report/html_reporter/template/index.html.jinja2' adding 'snakemake/report/html_reporter/template/logo.svg' adding 'snakemake/report/html_reporter/template/style.css' adding 'snakemake/report/html_reporter/template/components/__init__.py' adding 'snakemake/report/html_reporter/template/components/abstract_menu.js' adding 'snakemake/report/html_reporter/template/components/abstract_results.js' adding 'snakemake/report/html_reporter/template/components/abstract_view_manager.js' adding 'snakemake/report/html_reporter/template/components/app.js' adding 'snakemake/report/html_reporter/template/components/breadcrumbs.js' adding 'snakemake/report/html_reporter/template/components/button.js' adding 'snakemake/report/html_reporter/template/components/category.js' adding 'snakemake/report/html_reporter/template/components/common.js' adding 'snakemake/report/html_reporter/template/components/content.js' adding 'snakemake/report/html_reporter/template/components/icon.js' adding 'snakemake/report/html_reporter/template/components/list_heading.js' adding 'snakemake/report/html_reporter/template/components/list_item.js' adding 'snakemake/report/html_reporter/template/components/menu.js' adding 'snakemake/report/html_reporter/template/components/navbar.js' adding 'snakemake/report/html_reporter/template/components/report_info.js' adding 'snakemake/report/html_reporter/template/components/result_info.js' adding 'snakemake/report/html_reporter/template/components/result_view_button.js' adding 'snakemake/report/html_reporter/template/components/rule_graph.js' adding 'snakemake/report/html_reporter/template/components/rule_info.js' adding 'snakemake/report/html_reporter/template/components/search_results.js' adding 'snakemake/report/html_reporter/template/components/stats.js' adding 'snakemake/report/html_reporter/template/components/subcategory.js' adding 'snakemake/report/html_reporter/template/components/toggle.js' adding 'snakemake/script/__init__.py' adding 'snakemake/settings/__init__.py' adding 'snakemake/settings/enums.py' adding 'snakemake/settings/types.py' adding 'snakemake/template_rendering/__init__.py' adding 'snakemake/template_rendering/jinja2.py' adding 'snakemake/template_rendering/yte.py' adding 'snakemake/unit_tests/__init__.py' adding 'snakemake/unit_tests/templates/__init__.py' adding 'snakemake/unit_tests/templates/common.py.jinja2' adding 'snakemake/unit_tests/templates/ruletest.py.jinja2' adding 'snakemake-8.30.0.dist-info/LICENSE.md' adding 'snakemake-8.30.0.dist-info/METADATA' adding 'snakemake-8.30.0.dist-info/WHEEL' adding 'snakemake-8.30.0.dist-info/entry_points.txt' adding 'snakemake-8.30.0.dist-info/top_level.txt' adding 'snakemake-8.30.0.dist-info/RECORD' removing build/bdist.linux-s390x/wheel Building wheel for snakemake (pyproject.toml): finished with status 'done' Created wheel for snakemake: filename=snakemake-8.30.0-py3-none-any.whl size=1081211 sha256=758db8d67ae4aa963971bb14c3213e2e750c291513579610c10de47fea6ebadf Stored in directory: /builddir/.cache/pip/wheels/41/11/96/15a7921eaadfe671d643ceda633639d46c647e58da7547ef4a Successfully built snakemake + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.hgBODl + umask 022 + cd /builddir/build/BUILD/snakemake-8.30.0-build + '[' /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT ++ dirname /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT + mkdir -p /builddir/build/BUILD/snakemake-8.30.0-build + mkdir /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.30.0 ++ ls /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/pyproject-wheeldir/snakemake-8.30.0-py3-none-any.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=snakemake==8.30.0 + '[' -z snakemake==8.30.0 ']' + TMPDIR=/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/pyproject-wheeldir snakemake==8.30.0 Using pip 24.3.1 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/pyproject-wheeldir Processing ./pyproject-wheeldir/snakemake-8.30.0-py3-none-any.whl Installing collected packages: snakemake Creating /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/bin changing mode of /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/bin/snakemake to 755 Successfully installed snakemake-8.30.0 + '[' -d /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/bin/snakemake /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/bin/snakemake: updating + rm -rfv /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + site_dirs+=("/usr/lib/python3.13/site-packages") + '[' /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.13/site-packages/snakemake-8.30.0.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.30.0.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT --record /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.30.0.dist-info/RECORD --output /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-record + rm -fv /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.30.0.dist-info/RECORD removed '/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.30.0.dist-info/RECORD' + rm -fv /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.30.0.dist-info/REQUESTED removed '/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake-8.30.0.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-files --output-modules /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-modules --buildroot /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-record --prefix /usr -l snakemake + sed -r -i 's@^.*/(LICEN[CS]E|NOTICE)[^/]*$@%license &@' /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-files + install -d /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/man/man1 + PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/bin + PYTHONPATH=/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages + help2man --no-info '--name=Metapackage for snakemake: messaging extras' snakemake + install -t /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/nano -D -m 0644 -p misc/nano/syntax/snakemake.nanorc + install -d /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/vim/vimfiles + cp -vrp misc/vim/README.md misc/vim/ftdetect misc/vim/ftplugin misc/vim/syntax /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/vim/vimfiles 'misc/vim/README.md' -> '/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/vim/vimfiles/README.md' 'misc/vim/ftdetect' -> '/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/vim/vimfiles/ftdetect' 'misc/vim/ftdetect/snakemake.vim' -> '/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/vim/vimfiles/ftdetect/snakemake.vim' 'misc/vim/ftplugin' -> '/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin' 'misc/vim/ftplugin/snakemake' -> '/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake' 'misc/vim/ftplugin/snakemake/comment.vim' -> '/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake/comment.vim' 'misc/vim/ftplugin/snakemake/folding.vim' -> '/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake/folding.vim' 'misc/vim/ftplugin/snakemake/sections.vim' -> '/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/vim/vimfiles/ftplugin/snakemake/sections.vim' 'misc/vim/syntax' -> '/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/vim/vimfiles/syntax' 'misc/vim/syntax/snakemake.vim' -> '/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/vim/vimfiles/syntax/snakemake.vim' + find /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/vim/vimfiles -type f -name 'README.*' -print -delete /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/share/vim/vimfiles/README.md + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j2 /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/assets/__pycache__/__init__.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/__init__.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/assets/__pycache__/__init__.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/hash.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/local.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/storage.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/__init__.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/testcases/groups/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/testcases/simple/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/testcases/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/caching/__pycache__/hash.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/tests/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/argparse.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/configfile.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/__init__.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/git.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/prefix_lookup.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/typing.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/tbdstring.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/workdir_handler.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/common/__pycache__/__init__.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/containerize.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/env_modules.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/singularity.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/conda.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/singularity.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/executors/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/executors/__pycache__/dryrun.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/executors/__pycache__/google_lifesciences_helper.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/deployment/__pycache__/conda.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/executors/__pycache__/touch.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/ioutils/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/ioutils/__pycache__/branch.cpython-313.pyc: rewriting with normalized contents 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contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/html_reporter/__pycache__/common.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/__pycache__/common.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/__pycache__/rulegraph_spec.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/report/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/script/__pycache__/__init__.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/settings/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/settings/__pycache__/enums.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/script/__pycache__/__init__.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/settings/__pycache__/types.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/template_rendering/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/template_rendering/__pycache__/jinja2.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/template_rendering/__pycache__/yte.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/unit_tests/templates/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/unit_tests/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents 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/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/profiles.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/parser.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/ruleinfo.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/resources.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/rules.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/shell.cpython-313.pyc: replacing with 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/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/utils.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/wrapper.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/cli.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/workflow.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/dag.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/io.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/parser.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/notebook.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/path_modifier.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/jobs.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/persistence.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/shell.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/rules.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/scheduler.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/sourcecache.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/spawn_jobs.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/wrapper.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages/snakemake/__pycache__/workflow.cpython-313.opt-1.pyc: replacing with normalized version Scanned 114 directories and 455 files, processed 141 inodes, 140 modified (46 replaced + 94 rewritten), 0 unsupported format, 0 errors Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.Mq3eNr + umask 022 + cd /builddir/build/BUILD/snakemake-8.30.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-8.30.0 + '[' '!' -f /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-modules ']' + PATH=/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages + _PYTHONSITE=/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0-1.fc43.s390x-pyproject-modules -e '*.tests*' Check import: snakemake Check import: snakemake.api Check import: snakemake.assets Check import: snakemake.benchmark Check import: snakemake.caching Check import: snakemake.caching.hash Check import: snakemake.caching.local Check import: snakemake.caching.storage Check import: snakemake.checkpoints Check import: snakemake.cli Check import: snakemake.common Check import: snakemake.common.argparse Check import: snakemake.common.configfile Check import: snakemake.common.git Check import: snakemake.common.prefix_lookup Check import: snakemake.common.tbdstring Check import: snakemake.common.typing Check import: snakemake.common.workdir_handler Check import: snakemake.cwl Check import: snakemake.dag Check import: snakemake.decorators Check import: snakemake.deployment Check import: snakemake.deployment.conda Check import: snakemake.deployment.containerize Check import: snakemake.deployment.env_modules Check import: snakemake.deployment.singularity Check import: snakemake.exceptions Check import: snakemake.executors Check import: snakemake.executors.dryrun Check import: snakemake.executors.google_lifesciences_helper Check import: snakemake.executors.local Check import: snakemake.executors.touch Check import: snakemake.gui Check import: snakemake.io Check import: snakemake.ioflags Check import: snakemake.ioutils Check import: snakemake.ioutils.branch Check import: snakemake.ioutils.collect Check import: snakemake.ioutils.evaluate Check import: snakemake.ioutils.exists Check import: snakemake.ioutils.lookup Check import: snakemake.ioutils.rule_items_proxy Check import: snakemake.ioutils.subpath Check import: snakemake.jobs Check import: snakemake.linting Check import: snakemake.linting.links Check import: snakemake.linting.rules Check import: snakemake.linting.snakefiles Check import: snakemake.logging Check import: snakemake.modules Check import: snakemake.notebook Check import: snakemake.output_index Check import: snakemake.parser Check import: snakemake.path_modifier Check import: snakemake.persistence Check import: snakemake.profiles Check import: snakemake.remote Check import: snakemake.remote.AzBlob Check import: snakemake.remote.EGA Check import: snakemake.remote.FTP Check import: snakemake.remote.GS Check import: snakemake.remote.HTTP Check import: snakemake.remote.NCBI Check import: snakemake.remote.S3 Check import: snakemake.remote.S3Mocked Check import: snakemake.remote.SFTP Check import: snakemake.remote.XRootD Check import: snakemake.remote.dropbox Check import: snakemake.remote.gfal Check import: snakemake.remote.gridftp Check import: snakemake.remote.iRODS Check import: snakemake.remote.webdav Check import: snakemake.remote.zenodo Check import: snakemake.report Check import: snakemake.report.common Check import: snakemake.report.html_reporter Check import: snakemake.report.html_reporter.common Check import: snakemake.report.html_reporter.data Check import: snakemake.report.html_reporter.data.categories Check import: snakemake.report.html_reporter.data.common Check import: snakemake.report.html_reporter.data.configfiles Check import: snakemake.report.html_reporter.data.packages Check import: snakemake.report.html_reporter.data.results Check import: snakemake.report.html_reporter.data.rulegraph Check import: snakemake.report.html_reporter.data.rules Check import: snakemake.report.html_reporter.data.runtimes Check import: snakemake.report.html_reporter.data.timeline Check import: snakemake.report.html_reporter.template Check import: snakemake.report.html_reporter.template.components Check import: snakemake.report.rulegraph_spec Check import: snakemake.resources Check import: snakemake.ruleinfo Check import: snakemake.rules Check import: snakemake.scheduler Check import: snakemake.script Check import: snakemake.settings Check import: snakemake.settings.enums Check import: snakemake.settings.types Check import: snakemake.shell Check import: snakemake.sourcecache Check import: snakemake.spawn_jobs Check import: snakemake.storage Check import: snakemake.target_jobs Check import: snakemake.template_rendering Check import: snakemake.template_rendering.jinja2 Check import: snakemake.template_rendering.yte Check import: snakemake.unit_tests Check import: snakemake.unit_tests.templates Check import: snakemake.utils Check import: snakemake.workflow Check import: snakemake.wrapper + k='not test_ancient' + k='not test_ancient and not test_github_issue78' + k='not test_ancient and not test_github_issue78 and not test_issue1083' + k='not test_ancient and not test_github_issue78 and not test_issue1083 and not test_modules_prefix' + k='not test_ancient and not test_github_issue78 and not test_issue1083 and not test_modules_prefix and not test_shell_exec' + k='not test_ancient and not test_github_issue78 and not test_issue1083 and not test_modules_prefix and not test_shell_exec and not test_default_storage' + k='not test_ancient and not test_github_issue78 and not test_issue1083 and not test_modules_prefix and not test_shell_exec and not test_default_storage and not test_default_storage_local_job' + k='not test_ancient and not test_github_issue78 and not test_issue1083 and not test_modules_prefix and not test_shell_exec and not test_default_storage and not test_default_storage_local_job and not test_output_file_cache_storage' + k='not test_ancient and not test_github_issue78 and not test_issue1083 and not test_modules_prefix and not test_shell_exec and not test_default_storage and not test_default_storage_local_job and not test_output_file_cache_storage and not test_storage' + k='not test_ancient and not test_github_issue78 and not test_issue1083 and not test_modules_prefix and not test_shell_exec and not test_default_storage and not test_default_storage_local_job and not test_output_file_cache_storage and not test_storage and not test_cwl_singularity' + k='not test_ancient and not test_github_issue78 and not test_issue1083 and not test_modules_prefix and not test_shell_exec and not test_default_storage and not test_default_storage_local_job and not test_output_file_cache_storage and not test_storage and not test_cwl_singularity and not test_params_pickling' + k='not test_ancient and not test_github_issue78 and not test_issue1083 and not test_modules_prefix and not test_shell_exec and not test_default_storage and not test_default_storage_local_job and not test_output_file_cache_storage and not test_storage and not test_cwl_singularity and not test_params_pickling and not test_modules_peppy' + k='not test_ancient and not test_github_issue78 and not test_issue1083 and not test_modules_prefix and not test_shell_exec and not test_default_storage and not test_default_storage_local_job and not test_output_file_cache_storage and not test_storage and not test_cwl_singularity and not test_params_pickling and not test_modules_peppy and not test_pep_pathlib' + k='not test_ancient and not test_github_issue78 and not test_issue1083 and not test_modules_prefix and not test_shell_exec and not test_default_storage and not test_default_storage_local_job and not test_output_file_cache_storage and not test_storage and not test_cwl_singularity and not test_params_pickling and not test_modules_peppy and not test_pep_pathlib and not test_peppy' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/snakemake-8.30.0-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=2 + /usr/bin/pytest -v -k 'not test_ancient and not test_github_issue78 and not test_issue1083 and not test_modules_prefix and not test_shell_exec and not test_default_storage and not test_default_storage_local_job and not test_output_file_cache_storage and not test_storage and not test_cwl_singularity and not test_params_pickling and not test_modules_peppy and not test_pep_pathlib and not test_peppy' tests/tests.py tests/test_expand.py tests/test_io.py tests/test_schema.py tests/test_linting.py tests/test_executor_test_suite.py tests/test_internals.py ============================= test session starts ============================== platform linux -- Python 3.13.2, pytest-8.3.5, pluggy-1.5.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0 configfile: pyproject.toml plugins: mock-3.14.0 collecting ... collected 318 items / 21 deselected / 297 selected tests/tests.py::test_list_untracked PASSED [ 0%] tests/tests.py::test_delete_all_output PASSED [ 0%] tests/tests.py::test_github_issue_14 PASSED [ 1%] tests/tests.py::test_issue956 PASSED [ 1%] tests/tests.py::test01 PASSED [ 1%] tests/tests.py::test02 PASSED [ 2%] tests/tests.py::test03 PASSED [ 2%] tests/tests.py::test04 PASSED [ 2%] tests/tests.py::test05 PASSED [ 3%] tests/tests.py::test06 PASSED [ 3%] tests/tests.py::test07 PASSED [ 3%] tests/tests.py::test08 PASSED [ 4%] tests/tests.py::test09 PASSED [ 4%] tests/tests.py::test10 PASSED [ 4%] tests/tests.py::test11 PASSED [ 5%] tests/tests.py::test12 PASSED [ 5%] tests/tests.py::test13 PASSED [ 5%] tests/tests.py::test15 PASSED [ 6%] tests/tests.py::test_set_threads PASSED [ 6%] tests/tests.py::test_glpk_solver PASSED [ 6%] tests/tests.py::test_coin_solver PASSED [ 7%] tests/tests.py::test_directory PASSED [ 7%] tests/tests.py::test_directory2 PASSED [ 7%] tests/tests.py::test_set_resources_complex_profile PASSED [ 8%] tests/tests.py::test_set_resources_complex_cli PASSED [ 8%] tests/tests.py::test_subpath PASSED [ 8%] tests/tests.py::test_report PASSED [ 9%] tests/tests.py::test_report_href PASSED [ 9%] tests/tests.py::test_report_zip PASSED [ 9%] tests/tests.py::test_report_dir PASSED [ 10%] tests/tests.py::test_report_display_code PASSED [ 10%] tests/tests.py::test_params PASSED [ 10%] tests/tests.py::test_params_outdated_metadata PASSED [ 11%] tests/tests.py::test_same_wildcard PASSED [ 11%] tests/tests.py::test_conditional PASSED [ 11%] tests/tests.py::test_unpack_dict PASSED [ 12%] tests/tests.py::test_unpack_list PASSED [ 12%] tests/tests.py::test_shell PASSED [ 12%] tests/tests.py::test_temp PASSED [ 13%] tests/tests.py::test_keyword_list PASSED [ 13%] tests/tests.py::test_globwildcards PASSED [ 13%] tests/tests.py::test_ioutils PASSED [ 14%] tests/tests.py::test_local_import PASSED [ 14%] tests/tests.py::test_ruledeps PASSED [ 14%] tests/tests.py::test_url_include SKIPPED (no internet connection) [ 15%] tests/tests.py::test_touch PASSED [ 15%] tests/tests.py::test_touch_flag_with_directories PASSED [ 15%] tests/tests.py::test_config PASSED [ 16%] tests/tests.py::test_update_config PASSED [ 16%] tests/tests.py::test_config_merging PASSED [ 16%] tests/tests.py::test_wildcard_keyword PASSED [ 17%] tests/tests.py::test_benchmark PASSED [ 17%] tests/tests.py::test_benchmark_jsonl PASSED [ 17%] tests/tests.py::test_temp_expand PASSED [ 18%] tests/tests.py::test_wildcard_count_ambiguity PASSED [ 18%] tests/tests.py::test_multiple_includes PASSED [ 18%] tests/tests.py::test_name_override PASSED [ 19%] tests/tests.py::test_yaml_config PASSED [ 19%] tests/tests.py::test_symlink_temp SKIPPED (This does not work reliab...) [ 19%] tests/tests.py::test_empty_include PASSED [ 20%] tests/tests.py::test_script_python PASSED [ 20%] tests/tests.py::test_shadow PASSED [ 20%] tests/tests.py::test_shadow_copy PASSED [ 21%] tests/tests.py::test_shadow_prefix PASSED [ 21%] tests/tests.py::test_shadowed_log PASSED [ 21%] tests/tests.py::test_until PASSED [ 22%] tests/tests.py::test_omitfrom PASSED [ 22%] tests/tests.py::test_nonstr_params PASSED [ 22%] tests/tests.py::test_delete_output PASSED [ 23%] tests/tests.py::test_input_generator PASSED [ 23%] tests/tests.py::test_symlink_time_handling PASSED [ 23%] tests/tests.py::test_protected_symlink_output PASSED [ 24%] tests/tests.py::test_spaces_in_fnames PASSED [ 24%] tests/tests.py::test_deferred_func_eval PASSED [ 24%] tests/tests.py::test_format_params PASSED [ 25%] tests/tests.py::test_rule_defined_in_for_loop PASSED [ 25%] tests/tests.py::test_issue381 PASSED [ 25%] tests/tests.py::test_format_wildcards PASSED [ 26%] tests/tests.py::test_with_parentheses PASSED [ 26%] tests/tests.py::test_dup_out_patterns PASSED [ 26%] tests/tests.py::test_issue2826_failed_binary_logs PASSED [ 27%] tests/tests.py::test_threads PASSED [ 27%] tests/tests.py::test_threads0 PASSED [ 27%] tests/tests.py::test_run_namedlist PASSED [ 28%] tests/tests.py::test_profile PASSED [ 28%] tests/tests.py::test_singularity SKIPPED (no internet connection) [ 28%] tests/tests.py::test_singularity_cluster SKIPPED (no internet connec...) [ 29%] tests/tests.py::test_singularity_invalid PASSED [ 29%] tests/tests.py::test_singularity_module_invalid PASSED [ 29%] tests/tests.py::test_singularity_none SKIPPED (no internet connection) [ 30%] tests/tests.py::test_singularity_global SKIPPED (no internet connection) [ 30%] tests/tests.py::test_issue612 PASSED [ 30%] tests/tests.py::test_bash PASSED [ 31%] tests/tests.py::test_inoutput_is_path PASSED [ 31%] tests/tests.py::test_log_input PASSED [ 31%] tests/tests.py::test_issue805 PASSED [ 32%] tests/tests.py::test_issue823_1 PASSED [ 32%] tests/tests.py::test_issue823_2 PASSED [ 32%] tests/tests.py::test_issue823_3 PASSED [ 33%] tests/tests.py::test_pathlib PASSED [ 33%] tests/tests.py::test_pathlib_missing_file PASSED [ 34%] tests/tests.py::test_group_jobs PASSED [ 34%] tests/tests.py::test_group_jobs_attempts PASSED [ 34%] tests/tests.py::test_groups_out_of_jobs PASSED [ 35%] tests/tests.py::test_group_jobs_resources PASSED [ 35%] tests/tests.py::test_group_jobs_resources_with_max_threads PASSED [ 35%] tests/tests.py::test_group_jobs_resources_with_limited_resources PASSED [ 36%] tests/tests.py::test_global_resource_limits_limit_scheduling_of_groups PASSED [ 36%] tests/tests.py::test_new_resources_can_be_defined_as_local PASSED [ 36%] tests/tests.py::test_resources_can_be_overwritten_as_global PASSED [ 37%] tests/tests.py::test_scopes_submitted_to_cluster PASSED [ 37%] tests/tests.py::test_resources_submitted_to_cluster PASSED [ 37%] tests/tests.py::test_excluded_resources_not_submitted_to_cluster PASSED [ 38%] tests/tests.py::test_group_job_resources_with_pipe FAILED [ 38%] tests/tests.py::test_group_job_resources_with_pipe_with_too_much_constraint PASSED [ 38%] tests/tests.py::test_multicomp_group_jobs PASSED [ 39%] tests/tests.py::test_group_job_fail PASSED [ 39%] tests/tests.py::test_pipes_simple PASSED [ 39%] tests/tests.py::test_pipes_multiple PASSED [ 40%] tests/tests.py::test_pipes_fail PASSED [ 40%] tests/tests.py::test_validate PASSED [ 40%] tests/tests.py::test_validate_fail PASSED [ 41%] tests/tests.py::test_issue854 PASSED [ 41%] tests/tests.py::test_issue850 PASSED [ 41%] tests/tests.py::test_issue860 PASSED [ 42%] tests/tests.py::test_issue894 PASSED [ 42%] tests/tests.py::test_issue584 PASSED [ 42%] tests/tests.py::test_issue912 PASSED [ 43%] tests/tests.py::test_job_properties PASSED [ 43%] tests/tests.py::test_issue916 PASSED [ 43%] tests/tests.py::test_issue930 PASSED [ 44%] tests/tests.py::test_convert_to_cwl SKIPPED (Temporarily disable unt...) [ 44%] tests/tests.py::test_issue1037 PASSED [ 44%] tests/tests.py::test_checkpoints PASSED [ 45%] tests/tests.py::test_checkpoints_dir PASSED [ 45%] tests/tests.py::test_issue1092 PASSED [ 45%] tests/tests.py::test_issue958 PASSED [ 46%] tests/tests.py::test_issue471 PASSED [ 46%] tests/tests.py::test_issue1085 PASSED [ 46%] tests/tests.py::test_pipes2 PASSED [ 47%] tests/tests.py::test_expand_flag PASSED [ 47%] tests/tests.py::test_default_resources PASSED [ 47%] tests/tests.py::test_tmpdir PASSED [ 48%] tests/tests.py::test_tmpdir_default PASSED [ 48%] tests/tests.py::test_issue1284 PASSED [ 48%] tests/tests.py::test_issue1281 PASSED [ 49%] tests/tests.py::test_filegraph PASSED [ 49%] tests/tests.py::test_batch PASSED [ 49%] tests/tests.py::test_batch_final PASSED [ 50%] tests/tests.py::test_batch_fail PASSED [ 50%] tests/tests.py::test_github_issue52 PASSED [ 50%] tests/tests.py::test_envvars PASSED [ 51%] tests/tests.py::test_github_issue105 PASSED [ 51%] tests/tests.py::test_github_issue413 PASSED [ 51%] tests/tests.py::test_github_issue627 PASSED [ 52%] tests/tests.py::test_github_issue727 PASSED [ 52%] tests/tests.py::test_github_issue988 PASSED [ 52%] tests/tests.py::test_github_issue1062 SKIPPED (ftp connections curre...) 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=================================== FAILURES =================================== ______________________ test_group_job_resources_with_pipe ______________________ mocker = @skip_on_windows def test_group_job_resources_with_pipe(mocker): import copy from snakemake_interface_executor_plugins.executors.real import RealExecutor spy = mocker.spy(GroupResources, "basic_layered") # Cluster jobs normally get submitted with cores=all, but for testing purposes, # the system may not actually have enough cores to run the snakemake subprocess # (e.g. gh actions has only 2 cores). So cheat by patching over get_job_args get_job_args = copy.copy(RealExecutor.get_job_args) RealExecutor.get_job_args = lambda *args, **kwargs: get_job_args( *args, **{**kwargs, "cores": 6} ) > run( dpath("test_group_with_pipe"), cluster="./qsub", cores=6, resources={"mem_mb": 60000}, group_components={0: 5}, default_resources=DefaultResources(["mem_mb=0"]), ) tests/tests.py:1019: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ path = '/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/tests/test_group_with_pipe' shouldfail = False snakefile = '/tmp/snakemake-test_group_with_pipe-cbc9v1tt/Snakefile' subpath = None, no_tmpdir = False, check_md5 = True, check_results = True cores = 6, nodes = 3, set_pythonpath = True, cleanup = True conda_frontend = 'conda', config = {}, targets = set() container_image = 'snakemake/snakemake:latest', shellcmd = None sigint_after = None, overwrite_resource_scopes = None executor = 'cluster-generic' executor_settings = ExecutorSettings(submit_cmd='./qsub', status_cmd=None, cancel_cmd=None, cancel_nargs=20, sidecar_cmd=None) cleanup_scripts = True, scheduler_ilp_solver = None, report = None report_stylesheet = None, deployment_method = frozenset(), shadow_prefix = None until = frozenset(), omit_from = frozenset(), forcerun = frozenset() conda_list_envs = False, conda_create_envs = False, conda_prefix = None wrapper_prefix = None, printshellcmds = False, default_storage_provider = None default_storage_prefix = None local_storage_prefix = PosixPath('.snakemake/storage') remote_job_local_storage_prefix = None, archive = None, cluster = './qsub' cluster_status = None, retries = 0, resources = {'mem_mb': 60000} default_resources = group_components = {0: 5}, max_threads = None, overwrite_groups = {} configfiles = [], overwrite_resources = {}, batch = None, envvars = [] cache = None, edit_notebook = None, overwrite_scatter = {} generate_unit_tests = None, force_incomplete = False, containerize = False forceall = False, all_temp = False, cleanup_metadata = None rerun_triggers = frozenset({, , , , }) storage_provider_settings = None shared_fs_usage = frozenset({, , , , , }) benchmark_extended = False, apptainer_args = '' tmpdir = '/tmp/snakemake-test_group_with_pipe-cbc9v1tt' def run( path, shouldfail=False, snakefile="Snakefile", subpath=None, no_tmpdir=False, check_md5=True, check_results=None, cores=3, nodes=None, set_pythonpath=True, cleanup=True, conda_frontend="conda", config=dict(), targets=set(), container_image=os.environ.get("CONTAINER_IMAGE", "snakemake/snakemake:latest"), shellcmd=None, sigint_after=None, overwrite_resource_scopes=None, executor="local", executor_settings=None, cleanup_scripts=True, scheduler_ilp_solver=None, report=None, report_stylesheet=None, deployment_method=frozenset(), shadow_prefix=None, until=frozenset(), omit_from=frozenset(), forcerun=frozenset(), conda_list_envs=False, conda_create_envs=False, conda_prefix=None, wrapper_prefix=None, printshellcmds=False, default_storage_provider=None, default_storage_prefix=None, local_storage_prefix=Path(".snakemake/storage"), remote_job_local_storage_prefix=None, archive=None, cluster=None, cluster_status=None, retries=0, resources=dict(), default_resources=None, group_components=dict(), max_threads=None, overwrite_groups=dict(), configfiles=list(), overwrite_resources=dict(), batch=None, envvars=list(), cache=None, edit_notebook=None, overwrite_scatter=dict(), generate_unit_tests=None, force_incomplete=False, containerize=False, forceall=False, all_temp=False, cleanup_metadata=None, rerun_triggers=settings.RerunTrigger.all(), storage_provider_settings=None, shared_fs_usage=None, benchmark_extended=False, apptainer_args="", tmpdir=None, ): """ Test the Snakefile in the path. There must be a Snakefile in the path and a subdirectory named expected-results. If cleanup is False, we return the temporary directory to the calling test for inspection, and the test should clean it up. """ if check_results is None: if not shouldfail: check_results = True else: check_results = False if set_pythonpath: # Enforce current workdir (the snakemake source dir) to also be in PYTHONPATH # when subprocesses are invoked in the tempdir defined below. os.environ["PYTHONPATH"] = os.getcwd() elif "PYTHONPATH" in os.environ: del os.environ["PYTHONPATH"] results_dir = join(path, "expected-results") original_snakefile = join(path, snakefile) original_dirname = os.path.basename(os.path.dirname(original_snakefile)) assert os.path.exists(original_snakefile) if check_results: assert os.path.exists(results_dir) and os.path.isdir( results_dir ), "{} does not exist".format(results_dir) if tmpdir is None: # If we need to further check results, we won't cleanup tmpdir tmpdir = next(tempfile._get_candidate_names()) tmpdir = os.path.join( tempfile.gettempdir(), f"snakemake-{original_dirname}-{tmpdir}" ) os.mkdir(tmpdir) # copy files for f in os.listdir(path): copy(os.path.join(path, f), tmpdir) # Snakefile is now in temporary directory snakefile = join(tmpdir, snakefile) snakemake_api = None exception = None config = dict(config) # run snakemake if shellcmd: if not shellcmd.startswith("snakemake"): raise ValueError("shellcmd does not start with snakemake") shellcmd = "{} -m {}".format(sys.executable, shellcmd) try: if sigint_after is None: res = subprocess.run( shellcmd, cwd=path if no_tmpdir else tmpdir, check=True, shell=True, stderr=subprocess.STDOUT, stdout=subprocess.PIPE, ) print(res.stdout.decode()) success = True else: with subprocess.Popen( shlex.split(shellcmd), cwd=path if no_tmpdir else tmpdir, stderr=subprocess.STDOUT, stdout=subprocess.PIPE, ) as process: time.sleep(sigint_after) process.send_signal(signal.SIGINT) time.sleep(2) success = process.returncode == 0 if success: print(process.stdout.read().decode()) except subprocess.CalledProcessError as e: success = False print(e.stdout.decode(), file=sys.stderr) else: assert sigint_after is None, "Cannot sent SIGINT when calling directly" if cluster is not None: executor = "cluster-generic" plugin = ExecutorPluginRegistry().get_plugin(executor) executor_settings = plugin.settings_cls( submit_cmd=cluster, status_cmd=cluster_status ) nodes = 3 if shared_fs_usage is None: shared_fs_usage = SharedFSUsage.all() success = True with api.SnakemakeApi( settings.OutputSettings( verbose=True, printshellcmds=printshellcmds, show_failed_logs=True, ), ) as snakemake_api: try: workflow_api = snakemake_api.workflow( resource_settings=settings.ResourceSettings( cores=cores, nodes=nodes, overwrite_resource_scopes=( ResourceScopes(overwrite_resource_scopes) if overwrite_resource_scopes is not None else dict() ), overwrite_resources=overwrite_resources, resources=resources, default_resources=default_resources, max_threads=max_threads, overwrite_scatter=overwrite_scatter, ), config_settings=settings.ConfigSettings( config=config, configfiles=configfiles, ), storage_settings=settings.StorageSettings( default_storage_provider=default_storage_provider, default_storage_prefix=default_storage_prefix, all_temp=all_temp, shared_fs_usage=shared_fs_usage, local_storage_prefix=local_storage_prefix, remote_job_local_storage_prefix=remote_job_local_storage_prefix, ), storage_provider_settings=storage_provider_settings, workflow_settings=settings.WorkflowSettings( wrapper_prefix=wrapper_prefix, cache=cache, ), deployment_settings=settings.DeploymentSettings( conda_frontend=conda_frontend, conda_prefix=conda_prefix, deployment_method=deployment_method, apptainer_args=apptainer_args, ), snakefile=Path(original_snakefile if no_tmpdir else snakefile), workdir=Path(path if no_tmpdir else tmpdir), ) dag_api = workflow_api.dag( dag_settings=settings.DAGSettings( targets=targets, until=until, omit_from=omit_from, forcerun=forcerun, batch=batch, force_incomplete=force_incomplete, forceall=forceall, rerun_triggers=rerun_triggers, ), ) if report is not None: if report_stylesheet is not None: report_stylesheet = Path(report_stylesheet) report_settings = ReportSettings( path=Path(report), stylesheet_path=report_stylesheet ) dag_api.create_report( reporter="html", report_settings=report_settings, ) elif conda_create_envs: dag_api.conda_create_envs() elif conda_list_envs: dag_api.conda_list_envs() elif archive is not None: dag_api.archive(Path(archive)) elif generate_unit_tests is not None: dag_api.generate_unit_tests(Path(generate_unit_tests)) elif containerize: dag_api.containerize() elif cleanup_metadata: dag_api.cleanup_metadata(cleanup_metadata) else: dag_api.execute_workflow( executor=executor, execution_settings=settings.ExecutionSettings( cleanup_scripts=cleanup_scripts, shadow_prefix=shadow_prefix, retries=retries, edit_notebook=edit_notebook, ), remote_execution_settings=settings.RemoteExecutionSettings( container_image=container_image, seconds_between_status_checks=0, envvars=envvars, ), scheduling_settings=settings.SchedulingSettings( ilp_solver=scheduler_ilp_solver, ), group_settings=settings.GroupSettings( group_components=group_components, overwrite_groups=overwrite_groups, ), executor_settings=executor_settings, ) except Exception as e: success = False exception = e if shouldfail: assert not success, "expected error on execution" else: if not success: if snakemake_api is not None and exception is not None: snakemake_api.print_exception(exception) print("Workdir:") print_tree(tmpdir, exclude=".snakemake/conda") assert success, "expected successful execution" if check_results: for resultfile in get_expected_files(results_dir): if resultfile in [".gitignore", ".gitkeep"] or not os.path.isfile( os.path.join(results_dir, resultfile) ): # this means tests cannot use directories as output files continue targetfile = join(tmpdir, resultfile) expectedfile = join(results_dir, resultfile) if ON_WINDOWS: if os.path.exists(join(results_dir, resultfile + "_WIN")): continue # Skip test if a Windows specific file exists if resultfile.endswith("_WIN"): targetfile = join(tmpdir, resultfile[:-4]) elif resultfile.endswith("_WIN"): # Skip win specific result files on Posix platforms continue assert os.path.exists(targetfile), 'expected file "{}" not produced'.format( resultfile ) if check_md5: md5expected = md5sum(expectedfile, ignore_newlines=ON_WINDOWS) md5target = md5sum(targetfile, ignore_newlines=ON_WINDOWS) if md5target != md5expected: with open(expectedfile) as expected: expected_content = expected.read().strip() with open(targetfile) as target: content = target.read().strip() assert ( > False ), "wrong result produced for file '{resultfile}':\n------found------\n{content}\n-----expected-----\n{expected_content}\n-----------------".format( resultfile=resultfile, content=content, expected_content=expected_content, ) E AssertionError: wrong result produced for file 'test.0.out': E ------found------ E 0 E 0 E -----expected----- E 0 E 0 E 0 E ----------------- tests/common.py:470: AssertionError ----------------------------- Captured stderr call ----------------------------- host: 2dca7f2611bb4fc4b53c6adf76f741f8 Building DAG of jobs... shared_storage_local_copies: True remote_exec: False Using shell: /usr/bin/bash Provided remote nodes: 3 Provided resources: mem_mb=60000 Job stats: job count ----- ------- a 2 a_1 2 all 1 b 2 c 1 total 8 Resources before job selection: {'mem_mb': 60000, '_cores': 9223372036854775807, '_nodes': 3, '_job_count': 9223372036854775807} Ready jobs: 1 Select jobs to execute... Selecting jobs to run using greedy solver. Selected jobs: 1 Resources after job selection: {'mem_mb': 60000, '_cores': 9223372036854775801, '_nodes': 2, '_job_count': 9223372036854775807} Execute 1 jobs... [Fri Mar 21 17:31:47 2025] group job 0 (jobs in lexicogr. order): [Fri Mar 21 17:31:47 2025] rule a: output: a/0.out jobid: 3 reason: Missing output files: a/0.out wildcards: sample=0 threads: 4 resources: mem_mb=20000, mem_mib=19074, disk_mb=1000, disk_mib=954, tmpdir=, runtime=80 [Fri Mar 21 17:31:47 2025] rule a: output: a/1.out jobid: 6 reason: Missing output files: a/1.out wildcards: sample=1 threads: 4 resources: mem_mb=20000, mem_mib=19074, disk_mb=1000, disk_mib=954, tmpdir=, runtime=80 [Fri Mar 21 17:31:47 2025] rule a_1: output: test.0.txt (pipe) jobid: 4 reason: Missing output files: test.0.txt wildcards: sample=0 threads: 4 resources: mem_mb=40000, mem_mib=38147, disk_mb=1000, disk_mib=954, tmpdir=, runtime=40 [Fri Mar 21 17:31:47 2025] rule a_1: output: test.1.txt (pipe) jobid: 7 reason: Missing output files: test.1.txt wildcards: sample=1 threads: 4 resources: mem_mb=40000, mem_mib=38147, disk_mb=1000, disk_mib=954, tmpdir=, runtime=40 [Fri Mar 21 17:31:47 2025] rule b: input: a/0.out, test.0.txt output: test.0.out jobid: 2 reason: Missing output files: test.0.out; Input files updated by another job: a/0.out, test.0.txt wildcards: sample=0 threads: 2 resources: mem_mb=10000, mem_mib=9537, disk_mb=, tmpdir=, runtime=20 [Fri Mar 21 17:31:47 2025] rule b: input: a/1.out, test.1.txt output: test.1.out jobid: 5 reason: Missing output files: test.1.out; Input files updated by another job: test.1.txt, a/1.out wildcards: sample=1 threads: 2 resources: mem_mb=10000, mem_mib=9537, disk_mb=, tmpdir=, runtime=20 [Fri Mar 21 17:31:47 2025] rule c: input: test.0.out, test.1.out output: test.out jobid: 1 reason: Missing output files: test.out; Input files updated by another job: test.0.out, test.1.out resources: mem_mb=0, mem_mib=0, disk_mb=, tmpdir= General args: ['--force', '--target-files-omit-workdir-adjustment', '--keep-storage-local-copies', '--max-inventory-time 0', '--nocolor', '--notemp', '--no-hooks', '--nolock', '--ignore-incomplete', '', '--verbose ', '--rerun-triggers params input software-env mtime code', '', '', '', "--conda-frontend 'conda'", '', '', '', '', '', '--shared-fs-usage input-output software-deployment storage-local-copies sources source-cache persistence', '', '', '', '', '', '', '', '--latency-wait 3', "--scheduler 'ilp'", '', '--local-storage-prefix .snakemake/storage', "--scheduler-solver-path '/usr/bin'", '', '', '', '', '', '', '--default-resources base64//bWVtX21iPTA= base64//ZGlza19tYj1tYXgoMippbnB1dC5zaXplX21iLCAxMDAwKQ== base64//dG1wZGlyPXN5c3RlbV90bXBkaXI='] Jobscript: #!/bin/sh # properties = {"type": "group", "groupid": 0, "local": false, "input": [], "output": ["test.out"], "threads": 6, "resources": {"runtime": 240, "mem_mib": 47684, "disk_mb": 1000, "mem_mb": 50000, "disk_mib": 954}, "jobid": "ca808728-0a56-52cc-af22-f1ba7bd8f8d6"} cd /tmp/snakemake-test_group_with_pipe-cbc9v1tt && /usr/bin/python3 -m snakemake --snakefile '/tmp/snakemake-test_group_with_pipe-cbc9v1tt/Snakefile' --target-jobs 'c:' 'b:sample=0' 'b:sample=1' 'a:sample=0' 'a_1:sample=0' 'a:sample=1' 'a_1:sample=1' --allowed-rules a_1 c a b --local-groupid 'ca808728-0a56-52cc-af22-f1ba7bd8f8d6' --cores 6 --attempt 1 --resources 'mem_mib=47684' 'disk_mb=1000' 'mem_mb=50000' 'disk_mib=954' --wait-for-files '/tmp/snakemake-test_group_with_pipe-cbc9v1tt/.snakemake/tmp.0kfv3d_x' --force --target-files-omit-workdir-adjustment --keep-storage-local-copies --max-inventory-time 0 --nocolor --notemp --no-hooks --nolock --ignore-incomplete --verbose --rerun-triggers params input software-env mtime code --conda-frontend 'conda' --shared-fs-usage input-output software-deployment storage-local-copies sources source-cache persistence --latency-wait 3 --scheduler 'ilp' --local-storage-prefix .snakemake/storage --scheduler-solver-path '/usr/bin' --default-resources base64//bWVtX21iPTA= base64//ZGlza19tYj1tYXgoMippbnB1dC5zaXplX21iLCAxMDAwKQ== base64//dG1wZGlyPXN5c3RlbV90bXBkaXI= --mode 'remote' && touch '/tmp/snakemake-test_group_with_pipe-cbc9v1tt/.snakemake/tmp.0kfv3d_x/ca808728-0a56-52cc-af22-f1ba7bd8f8d6.jobfinished' || (touch '/tmp/snakemake-test_group_with_pipe-cbc9v1tt/.snakemake/tmp.0kfv3d_x/ca808728-0a56-52cc-af22-f1ba7bd8f8d6.jobfailed'; exit 1) host: 2dca7f2611bb4fc4b53c6adf76f741f8 Building DAG of jobs... shared_storage_local_copies: True remote_exec: True Using shell: /usr/bin/bash Provided cores: 6 Rules claiming more threads will be scaled down. Provided resources: mem_mib=47684, disk_mb=1000, mem_mb=50000, disk_mib=954 Resources before job selection: {'mem_mib': 47684, 'disk_mb': 1000, 'mem_mb': 50000, 'disk_mib': 954, '_cores': 6, '_nodes': 9223372036854775807, '_job_count': 9223372036854775807} Ready jobs: 2 Select jobs to execute... Selected jobs: 1 Resources after job selection: {'mem_mib': 28610, 'disk_mb': 0, 'mem_mb': 30000, 'disk_mib': 0, '_cores': 2, '_nodes': 9223372036854775806, '_job_count': 9223372036854775807} Execute 1 jobs... [Fri Mar 21 17:31:47 2025] localrule a: output: a/1.out jobid: 5 reason: Forced execution wildcards: sample=1 threads: 4 resources: mem_mb=20000, mem_mib=19074, disk_mb=1000, disk_mib=954, tmpdir=/tmp, runtime=80 [Fri Mar 21 17:31:47 2025] Finished job 5. 1 of 7 steps (14%) done Resources before job selection: {'mem_mib': 47684, 'disk_mb': 1000, 'mem_mb': 50000, 'disk_mib': 954, '_cores': 6, '_nodes': 9223372036854775807, '_job_count': 9223372036854775807} Ready jobs: 2 Select jobs to execute... Selected jobs: 1 Resources after job selection: {'mem_mib': 0, 'disk_mb': 0, 'mem_mb': 0, 'disk_mib': 0, '_cores': 0, '_nodes': 9223372036854775806, '_job_count': 9223372036854775807} Execute 1 jobs... [Fri Mar 21 17:31:47 2025] group job 46a637cc-02c9-4c0c-a48e-8be579087c78 (jobs in lexicogr. order): [Fri Mar 21 17:31:47 2025] localrule a_1: output: test.1.txt (pipe) jobid: 6 reason: Forced execution wildcards: sample=1 threads: 4 resources: mem_mb=40000, mem_mib=38147, disk_mb=1000, disk_mib=954, tmpdir=/tmp, runtime=40 [Fri Mar 21 17:31:47 2025] localrule b: input: a/1.out, test.1.txt output: test.1.out jobid: 4 reason: Forced execution wildcards: sample=1 threads: 2 resources: mem_mb=10000, mem_mib=9537, disk_mb=, tmpdir=/tmp, runtime=20 Job inside group is finished. Job inside group is finished. [Fri Mar 21 17:31:49 2025] Finished job 6. [Fri Mar 21 17:31:49 2025] Finished job 4. 3 of 7 steps (43%) done Resources before job selection: {'mem_mib': 47684, 'disk_mb': 1000, 'mem_mb': 50000, 'disk_mib': 954, '_cores': 6, '_nodes': 9223372036854775807, '_job_count': 9223372036854775807} Ready jobs: 1 Select jobs to execute... Selecting jobs to run using greedy solver. Selected jobs: 1 Resources after job selection: {'mem_mib': 28610, 'disk_mb': 0, 'mem_mb': 30000, 'disk_mib': 0, '_cores': 2, '_nodes': 9223372036854775806, '_job_count': 9223372036854775807} Execute 1 jobs... [Fri Mar 21 17:31:49 2025] localrule a: output: a/0.out jobid: 2 reason: Forced execution wildcards: sample=0 threads: 4 resources: mem_mb=20000, mem_mib=19074, disk_mb=1000, disk_mib=954, tmpdir=/tmp, runtime=80 [Fri Mar 21 17:31:49 2025] Finished job 2. 4 of 7 steps (57%) done Resources before job selection: {'mem_mib': 47684, 'disk_mb': 1000, 'mem_mb': 50000, 'disk_mib': 954, '_cores': 6, '_nodes': 9223372036854775807, '_job_count': 9223372036854775807} Ready jobs: 1 Select jobs to execute... Selecting jobs to run using greedy solver. Selected jobs: 1 Resources after job selection: {'mem_mib': 0, 'disk_mb': 0, 'mem_mb': 0, 'disk_mib': 0, '_cores': 0, '_nodes': 9223372036854775806, '_job_count': 9223372036854775807} Execute 1 jobs... [Fri Mar 21 17:31:49 2025] group job e7c9f8d6-7835-432a-82b1-9ebc04d2f3d6 (jobs in lexicogr. order): [Fri Mar 21 17:31:49 2025] localrule a_1: output: test.0.txt (pipe) jobid: 3 reason: Forced execution wildcards: sample=0 threads: 4 resources: mem_mb=40000, mem_mib=38147, disk_mb=1000, disk_mib=954, tmpdir=/tmp, runtime=40 [Fri Mar 21 17:31:49 2025] localrule b: input: a/0.out, test.0.txt output: test.0.out jobid: 1 reason: Forced execution wildcards: sample=0 threads: 2 resources: mem_mb=10000, mem_mib=9537, disk_mb=, tmpdir=/tmp, runtime=20 Job inside group is finished. Job inside group is finished. [Fri Mar 21 17:31:51 2025] Finished job 3. [Fri Mar 21 17:31:51 2025] Finished job 1. 6 of 7 steps (86%) done Resources before job selection: {'mem_mib': 47684, 'disk_mb': 1000, 'mem_mb': 50000, 'disk_mib': 954, '_cores': 6, '_nodes': 9223372036854775807, '_job_count': 9223372036854775807} Ready jobs: 1 Select jobs to execute... Selecting jobs to run using greedy solver. Selected jobs: 1 Resources after job selection: {'mem_mib': 47684, 'disk_mb': 0, 'mem_mb': 50000, 'disk_mib': 0, '_cores': 5, '_nodes': 9223372036854775806, '_job_count': 9223372036854775807} Execute 1 jobs... [Fri Mar 21 17:31:51 2025] localrule c: input: test.0.out, test.1.out output: test.out jobid: 0 reason: Forced execution resources: mem_mb=0, mem_mib=0, disk_mb=1000, disk_mib=954, tmpdir=/tmp [Fri Mar 21 17:31:51 2025] Finished job 0. 7 of 7 steps (100%) done Storing output in storage. Submitted group job ca808728-0a56-52cc-af22-f1ba7bd8f8d6 with external jobid '6438'. [Fri Mar 21 17:31:52 2025] Finished job 6. [Fri Mar 21 17:31:52 2025] Finished job 3. [Fri Mar 21 17:31:52 2025] Finished job 7. [Fri Mar 21 17:31:52 2025] Finished job 5. [Fri Mar 21 17:31:52 2025] Finished job 4. [Fri Mar 21 17:31:52 2025] Finished job 2. [Fri Mar 21 17:31:52 2025] Finished job 1. 7 of 8 steps (88%) done Resources before job selection: {'mem_mb': 60000, '_cores': 9223372036854775807, '_nodes': 3, '_job_count': 9223372036854775807} Ready jobs: 1 Select jobs to execute... Selecting jobs to run using greedy solver. Selected jobs: 1 Resources after job selection: {'mem_mb': 60000, '_cores': 9223372036854775806, '_nodes': 2, '_job_count': 9223372036854775807} Execute 1 jobs... [Fri Mar 21 17:31:52 2025] localrule all: input: test.out jobid: 0 reason: Input files updated by another job: test.out resources: mem_mb=0, mem_mib=0, disk_mb=1000, disk_mib=954, tmpdir=/tmp [Fri Mar 21 17:31:52 2025] Finished job 0. 8 of 8 steps (100%) done Complete log: .snakemake/log/2025-03-21T173147.257327.snakemake.log unlocking removing lock removing lock removed all locks ------------------------------ Captured log call ------------------------------- INFO snakemake.logging:logging.py:540 host: 2dca7f2611bb4fc4b53c6adf76f741f8 WARNING snakemake.logging:logging.py:625 Building DAG of jobs... DEBUG snakemake.logging:logging.py:631 shared_storage_local_copies: True DEBUG snakemake.logging:logging.py:631 remote_exec: False WARNING snakemake.logging:logging.py:625 Using shell: /usr/bin/bash WARNING snakemake.logging:logging.py:633 Provided remote nodes: 3 WARNING snakemake.logging:logging.py:633 Provided resources: mem_mb=60000 WARNING snakemake.logging:logging.py:635 Job stats: job count ----- ------- a 2 a_1 2 all 1 b 2 c 1 total 8 DEBUG snakemake.logging:logging.py:631 Resources before job selection: {'mem_mb': 60000, '_cores': 9223372036854775807, '_nodes': 3, '_job_count': 9223372036854775807} DEBUG snakemake.logging:logging.py:631 Ready jobs: 1 WARNING snakemake.logging:logging.py:625 Select jobs to execute... DEBUG snakemake.logging:logging.py:631 Selecting jobs to run using greedy solver. DEBUG snakemake.logging:logging.py:631 Selected jobs: 1 DEBUG snakemake.logging:logging.py:631 Resources after job selection: {'mem_mb': 60000, '_cores': 9223372036854775801, '_nodes': 2, '_job_count': 9223372036854775807} WARNING snakemake.logging:logging.py:625 Execute 1 jobs... INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:47 2025] INFO snakemake.logging:logging.py:565 group job 0 (jobs in lexicogr. order): INFO snakemake.logging:logging.py:543 INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:47 2025] INFO snakemake.logging:logging.py:550 rule a: output: a/0.out jobid: 3 reason: Missing output files: a/0.out wildcards: sample=0 threads: 4 resources: mem_mb=20000, mem_mib=19074, disk_mb=1000, disk_mib=954, tmpdir=, runtime=80 INFO snakemake.logging:logging.py:557 INFO snakemake.logging:logging.py:543 INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:47 2025] INFO snakemake.logging:logging.py:550 rule a: output: a/1.out jobid: 6 reason: Missing output files: a/1.out wildcards: sample=1 threads: 4 resources: mem_mb=20000, mem_mib=19074, disk_mb=1000, disk_mib=954, tmpdir=, runtime=80 INFO snakemake.logging:logging.py:557 INFO snakemake.logging:logging.py:543 INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:47 2025] INFO snakemake.logging:logging.py:550 rule a_1: output: test.0.txt (pipe) jobid: 4 reason: Missing output files: test.0.txt wildcards: sample=0 threads: 4 resources: mem_mb=40000, mem_mib=38147, disk_mb=1000, disk_mib=954, tmpdir=, runtime=40 INFO snakemake.logging:logging.py:557 INFO snakemake.logging:logging.py:543 INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:47 2025] INFO snakemake.logging:logging.py:550 rule a_1: output: test.1.txt (pipe) jobid: 7 reason: Missing output files: test.1.txt wildcards: sample=1 threads: 4 resources: mem_mb=40000, mem_mib=38147, disk_mb=1000, disk_mib=954, tmpdir=, runtime=40 INFO snakemake.logging:logging.py:557 INFO snakemake.logging:logging.py:543 INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:47 2025] INFO snakemake.logging:logging.py:550 rule b: input: a/0.out, test.0.txt output: test.0.out jobid: 2 reason: Missing output files: test.0.out; Input files updated by another job: a/0.out, test.0.txt wildcards: sample=0 threads: 2 resources: mem_mb=10000, mem_mib=9537, disk_mb=, tmpdir=, runtime=20 INFO snakemake.logging:logging.py:557 INFO snakemake.logging:logging.py:543 INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:47 2025] INFO snakemake.logging:logging.py:550 rule b: input: a/1.out, test.1.txt output: test.1.out jobid: 5 reason: Missing output files: test.1.out; Input files updated by another job: test.1.txt, a/1.out wildcards: sample=1 threads: 2 resources: mem_mb=10000, mem_mib=9537, disk_mb=, tmpdir=, runtime=20 INFO snakemake.logging:logging.py:557 INFO snakemake.logging:logging.py:543 INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:47 2025] INFO snakemake.logging:logging.py:550 rule c: input: test.0.out, test.1.out output: test.out jobid: 1 reason: Missing output files: test.out; Input files updated by another job: test.0.out, test.1.out resources: mem_mb=0, mem_mib=0, disk_mb=, tmpdir= INFO snakemake.logging:logging.py:557 DEBUG snakemake.logging:logging.py:631 General args: ['--force', '--target-files-omit-workdir-adjustment', '--keep-storage-local-copies', '--max-inventory-time 0', '--nocolor', '--notemp', '--no-hooks', '--nolock', '--ignore-incomplete', '', '--verbose ', '--rerun-triggers params input software-env mtime code', '', '', '', "--conda-frontend 'conda'", '', '', '', '', '', '--shared-fs-usage input-output software-deployment storage-local-copies sources source-cache persistence', '', '', '', '', '', '', '', '--latency-wait 3', "--scheduler 'ilp'", '', '--local-storage-prefix .snakemake/storage', "--scheduler-solver-path '/usr/bin'", '', '', '', '', '', '', '--default-resources base64//bWVtX21iPTA= base64//ZGlza19tYj1tYXgoMippbnB1dC5zaXplX21iLCAxMDAwKQ== base64//dG1wZGlyPXN5c3RlbV90bXBkaXI='] DEBUG snakemake.logging:logging.py:631 Jobscript: #!/bin/sh # properties = {"type": "group", "groupid": 0, "local": false, "input": [], "output": ["test.out"], "threads": 6, "resources": {"runtime": 240, "mem_mib": 47684, "disk_mb": 1000, "mem_mb": 50000, "disk_mib": 954}, "jobid": "ca808728-0a56-52cc-af22-f1ba7bd8f8d6"} cd /tmp/snakemake-test_group_with_pipe-cbc9v1tt && /usr/bin/python3 -m snakemake --snakefile '/tmp/snakemake-test_group_with_pipe-cbc9v1tt/Snakefile' --target-jobs 'c:' 'b:sample=0' 'b:sample=1' 'a:sample=0' 'a_1:sample=0' 'a:sample=1' 'a_1:sample=1' --allowed-rules a_1 c a b --local-groupid 'ca808728-0a56-52cc-af22-f1ba7bd8f8d6' --cores 6 --attempt 1 --resources 'mem_mib=47684' 'disk_mb=1000' 'mem_mb=50000' 'disk_mib=954' --wait-for-files '/tmp/snakemake-test_group_with_pipe-cbc9v1tt/.snakemake/tmp.0kfv3d_x' --force --target-files-omit-workdir-adjustment --keep-storage-local-copies --max-inventory-time 0 --nocolor --notemp --no-hooks --nolock --ignore-incomplete --verbose --rerun-triggers params input software-env mtime code --conda-frontend 'conda' --shared-fs-usage input-output software-deployment storage-local-copies sources source-cache persistence --latency-wait 3 --scheduler 'ilp' --local-storage-prefix .snakemake/storage --scheduler-solver-path '/usr/bin' --default-resources base64//bWVtX21iPTA= base64//ZGlza19tYj1tYXgoMippbnB1dC5zaXplX21iLCAxMDAwKQ== base64//dG1wZGlyPXN5c3RlbV90bXBkaXI= --mode 'remote' && touch '/tmp/snakemake-test_group_with_pipe-cbc9v1tt/.snakemake/tmp.0kfv3d_x/ca808728-0a56-52cc-af22-f1ba7bd8f8d6.jobfinished' || (touch '/tmp/snakemake-test_group_with_pipe-cbc9v1tt/.snakemake/tmp.0kfv3d_x/ca808728-0a56-52cc-af22-f1ba7bd8f8d6.jobfailed'; exit 1) WARNING snakemake.logging:logging.py:625 Submitted group job ca808728-0a56-52cc-af22-f1ba7bd8f8d6 with external jobid '6438'. INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:52 2025] INFO snakemake.logging:logging.py:649 Finished job 6. INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:52 2025] INFO snakemake.logging:logging.py:649 Finished job 3. INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:52 2025] INFO snakemake.logging:logging.py:649 Finished job 7. INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:52 2025] INFO snakemake.logging:logging.py:649 Finished job 5. INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:52 2025] INFO snakemake.logging:logging.py:649 Finished job 4. INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:52 2025] INFO snakemake.logging:logging.py:649 Finished job 2. INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:52 2025] INFO snakemake.logging:logging.py:649 Finished job 1. INFO snakemake.logging:logging.py:639 7 of 8 steps (88%) done DEBUG snakemake.logging:logging.py:631 Resources before job selection: {'mem_mb': 60000, '_cores': 9223372036854775807, '_nodes': 3, '_job_count': 9223372036854775807} DEBUG snakemake.logging:logging.py:631 Ready jobs: 1 WARNING snakemake.logging:logging.py:625 Select jobs to execute... DEBUG snakemake.logging:logging.py:631 Selecting jobs to run using greedy solver. DEBUG snakemake.logging:logging.py:631 Selected jobs: 1 DEBUG snakemake.logging:logging.py:631 Resources after job selection: {'mem_mb': 60000, '_cores': 9223372036854775806, '_nodes': 2, '_job_count': 9223372036854775807} WARNING snakemake.logging:logging.py:625 Execute 1 jobs... INFO snakemake.logging:logging.py:543 INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:52 2025] INFO snakemake.logging:logging.py:550 localrule all: input: test.out jobid: 0 reason: Input files updated by another job: test.out resources: mem_mb=0, mem_mib=0, disk_mb=1000, disk_mib=954, tmpdir=/tmp INFO snakemake.logging:logging.py:557 INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:31:52 2025] INFO snakemake.logging:logging.py:649 Finished job 0. INFO snakemake.logging:logging.py:639 8 of 8 steps (100%) done WARNING snakemake.logging:logging.py:625 Complete log: .snakemake/log/2025-03-21T173147.257327.snakemake.log DEBUG snakemake.logging:logging.py:631 unlocking DEBUG snakemake.logging:logging.py:631 removing lock DEBUG snakemake.logging:logging.py:631 removing lock DEBUG snakemake.logging:logging.py:631 removed all locks _______________________________ test_update_flag _______________________________ @skip_on_windows # OS agnostic def test_update_flag(): > run(dpath("test_update_flag")) tests/tests.py:1967: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ path = '/builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/tests/test_update_flag' shouldfail = False snakefile = '/tmp/snakemake-test_update_flag-7qgz2ke6/Snakefile', subpath = None no_tmpdir = False, check_md5 = True, check_results = True, cores = 3 nodes = None, set_pythonpath = True, cleanup = True, conda_frontend = 'conda' config = {}, targets = set(), container_image = 'snakemake/snakemake:latest' shellcmd = None, sigint_after = None, overwrite_resource_scopes = None executor = 'local', executor_settings = None, cleanup_scripts = True scheduler_ilp_solver = None, report = None, report_stylesheet = None deployment_method = frozenset(), shadow_prefix = None, until = frozenset() omit_from = frozenset(), forcerun = frozenset(), conda_list_envs = False conda_create_envs = False, conda_prefix = None, wrapper_prefix = None printshellcmds = False, default_storage_provider = None default_storage_prefix = None local_storage_prefix = PosixPath('.snakemake/storage') remote_job_local_storage_prefix = None, archive = None, cluster = None cluster_status = None, retries = 0, resources = {}, default_resources = None group_components = {}, max_threads = None, overwrite_groups = {} configfiles = [], overwrite_resources = {}, batch = None, envvars = [] cache = None, edit_notebook = None, overwrite_scatter = {} generate_unit_tests = None, force_incomplete = False, containerize = False forceall = False, all_temp = False, cleanup_metadata = None rerun_triggers = frozenset({, , , , }) storage_provider_settings = None shared_fs_usage = frozenset({, , , , , }) benchmark_extended = False, apptainer_args = '' tmpdir = '/tmp/snakemake-test_update_flag-7qgz2ke6' def run( path, shouldfail=False, snakefile="Snakefile", subpath=None, no_tmpdir=False, check_md5=True, check_results=None, cores=3, nodes=None, set_pythonpath=True, cleanup=True, conda_frontend="conda", config=dict(), targets=set(), container_image=os.environ.get("CONTAINER_IMAGE", "snakemake/snakemake:latest"), shellcmd=None, sigint_after=None, overwrite_resource_scopes=None, executor="local", executor_settings=None, cleanup_scripts=True, scheduler_ilp_solver=None, report=None, report_stylesheet=None, deployment_method=frozenset(), shadow_prefix=None, until=frozenset(), omit_from=frozenset(), forcerun=frozenset(), conda_list_envs=False, conda_create_envs=False, conda_prefix=None, wrapper_prefix=None, printshellcmds=False, default_storage_provider=None, default_storage_prefix=None, local_storage_prefix=Path(".snakemake/storage"), remote_job_local_storage_prefix=None, archive=None, cluster=None, cluster_status=None, retries=0, resources=dict(), default_resources=None, group_components=dict(), max_threads=None, overwrite_groups=dict(), configfiles=list(), overwrite_resources=dict(), batch=None, envvars=list(), cache=None, edit_notebook=None, overwrite_scatter=dict(), generate_unit_tests=None, force_incomplete=False, containerize=False, forceall=False, all_temp=False, cleanup_metadata=None, rerun_triggers=settings.RerunTrigger.all(), storage_provider_settings=None, shared_fs_usage=None, benchmark_extended=False, apptainer_args="", tmpdir=None, ): """ Test the Snakefile in the path. There must be a Snakefile in the path and a subdirectory named expected-results. If cleanup is False, we return the temporary directory to the calling test for inspection, and the test should clean it up. """ if check_results is None: if not shouldfail: check_results = True else: check_results = False if set_pythonpath: # Enforce current workdir (the snakemake source dir) to also be in PYTHONPATH # when subprocesses are invoked in the tempdir defined below. os.environ["PYTHONPATH"] = os.getcwd() elif "PYTHONPATH" in os.environ: del os.environ["PYTHONPATH"] results_dir = join(path, "expected-results") original_snakefile = join(path, snakefile) original_dirname = os.path.basename(os.path.dirname(original_snakefile)) assert os.path.exists(original_snakefile) if check_results: assert os.path.exists(results_dir) and os.path.isdir( results_dir ), "{} does not exist".format(results_dir) if tmpdir is None: # If we need to further check results, we won't cleanup tmpdir tmpdir = next(tempfile._get_candidate_names()) tmpdir = os.path.join( tempfile.gettempdir(), f"snakemake-{original_dirname}-{tmpdir}" ) os.mkdir(tmpdir) # copy files for f in os.listdir(path): copy(os.path.join(path, f), tmpdir) # Snakefile is now in temporary directory snakefile = join(tmpdir, snakefile) snakemake_api = None exception = None config = dict(config) # run snakemake if shellcmd: if not shellcmd.startswith("snakemake"): raise ValueError("shellcmd does not start with snakemake") shellcmd = "{} -m {}".format(sys.executable, shellcmd) try: if sigint_after is None: res = subprocess.run( shellcmd, cwd=path if no_tmpdir else tmpdir, check=True, shell=True, stderr=subprocess.STDOUT, stdout=subprocess.PIPE, ) print(res.stdout.decode()) success = True else: with subprocess.Popen( shlex.split(shellcmd), cwd=path if no_tmpdir else tmpdir, stderr=subprocess.STDOUT, stdout=subprocess.PIPE, ) as process: time.sleep(sigint_after) process.send_signal(signal.SIGINT) time.sleep(2) success = process.returncode == 0 if success: print(process.stdout.read().decode()) except subprocess.CalledProcessError as e: success = False print(e.stdout.decode(), file=sys.stderr) else: assert sigint_after is None, "Cannot sent SIGINT when calling directly" if cluster is not None: executor = "cluster-generic" plugin = ExecutorPluginRegistry().get_plugin(executor) executor_settings = plugin.settings_cls( submit_cmd=cluster, status_cmd=cluster_status ) nodes = 3 if shared_fs_usage is None: shared_fs_usage = SharedFSUsage.all() success = True with api.SnakemakeApi( settings.OutputSettings( verbose=True, printshellcmds=printshellcmds, show_failed_logs=True, ), ) as snakemake_api: try: workflow_api = snakemake_api.workflow( resource_settings=settings.ResourceSettings( cores=cores, nodes=nodes, overwrite_resource_scopes=( ResourceScopes(overwrite_resource_scopes) if overwrite_resource_scopes is not None else dict() ), overwrite_resources=overwrite_resources, resources=resources, default_resources=default_resources, max_threads=max_threads, overwrite_scatter=overwrite_scatter, ), config_settings=settings.ConfigSettings( config=config, configfiles=configfiles, ), storage_settings=settings.StorageSettings( default_storage_provider=default_storage_provider, default_storage_prefix=default_storage_prefix, all_temp=all_temp, shared_fs_usage=shared_fs_usage, local_storage_prefix=local_storage_prefix, remote_job_local_storage_prefix=remote_job_local_storage_prefix, ), storage_provider_settings=storage_provider_settings, workflow_settings=settings.WorkflowSettings( wrapper_prefix=wrapper_prefix, cache=cache, ), deployment_settings=settings.DeploymentSettings( conda_frontend=conda_frontend, conda_prefix=conda_prefix, deployment_method=deployment_method, apptainer_args=apptainer_args, ), snakefile=Path(original_snakefile if no_tmpdir else snakefile), workdir=Path(path if no_tmpdir else tmpdir), ) dag_api = workflow_api.dag( dag_settings=settings.DAGSettings( targets=targets, until=until, omit_from=omit_from, forcerun=forcerun, batch=batch, force_incomplete=force_incomplete, forceall=forceall, rerun_triggers=rerun_triggers, ), ) if report is not None: if report_stylesheet is not None: report_stylesheet = Path(report_stylesheet) report_settings = ReportSettings( path=Path(report), stylesheet_path=report_stylesheet ) dag_api.create_report( reporter="html", report_settings=report_settings, ) elif conda_create_envs: dag_api.conda_create_envs() elif conda_list_envs: dag_api.conda_list_envs() elif archive is not None: dag_api.archive(Path(archive)) elif generate_unit_tests is not None: dag_api.generate_unit_tests(Path(generate_unit_tests)) elif containerize: dag_api.containerize() elif cleanup_metadata: dag_api.cleanup_metadata(cleanup_metadata) else: dag_api.execute_workflow( executor=executor, execution_settings=settings.ExecutionSettings( cleanup_scripts=cleanup_scripts, shadow_prefix=shadow_prefix, retries=retries, edit_notebook=edit_notebook, ), remote_execution_settings=settings.RemoteExecutionSettings( container_image=container_image, seconds_between_status_checks=0, envvars=envvars, ), scheduling_settings=settings.SchedulingSettings( ilp_solver=scheduler_ilp_solver, ), group_settings=settings.GroupSettings( group_components=group_components, overwrite_groups=overwrite_groups, ), executor_settings=executor_settings, ) except Exception as e: success = False exception = e if shouldfail: assert not success, "expected error on execution" else: if not success: if snakemake_api is not None and exception is not None: snakemake_api.print_exception(exception) print("Workdir:") print_tree(tmpdir, exclude=".snakemake/conda") assert success, "expected successful execution" if check_results: for resultfile in get_expected_files(results_dir): if resultfile in [".gitignore", ".gitkeep"] or not os.path.isfile( os.path.join(results_dir, resultfile) ): # this means tests cannot use directories as output files continue targetfile = join(tmpdir, resultfile) expectedfile = join(results_dir, resultfile) if ON_WINDOWS: if os.path.exists(join(results_dir, resultfile + "_WIN")): continue # Skip test if a Windows specific file exists if resultfile.endswith("_WIN"): targetfile = join(tmpdir, resultfile[:-4]) elif resultfile.endswith("_WIN"): # Skip win specific result files on Posix platforms continue assert os.path.exists(targetfile), 'expected file "{}" not produced'.format( resultfile ) if check_md5: md5expected = md5sum(expectedfile, ignore_newlines=ON_WINDOWS) md5target = md5sum(targetfile, ignore_newlines=ON_WINDOWS) if md5target != md5expected: with open(expectedfile) as expected: expected_content = expected.read().strip() with open(targetfile) as target: content = target.read().strip() assert ( > False ), "wrong result produced for file '{resultfile}':\n------found------\n{content}\n-----expected-----\n{expected_content}\n-----------------".format( resultfile=resultfile, content=content, expected_content=expected_content, ) E AssertionError: wrong result produced for file 'test.txt': E ------found------ E foo E -----expected----- E foo E bar E ----------------- tests/common.py:470: AssertionError ----------------------------- Captured stderr call ----------------------------- Assuming unrestricted shared filesystem usage. host: 2dca7f2611bb4fc4b53c6adf76f741f8 Building DAG of jobs... shared_storage_local_copies: True remote_exec: False Using shell: /usr/bin/bash Provided cores: 3 Rules claiming more threads will be scaled down. Job stats: job count ----- ------- all 1 b 1 total 2 Resources before job selection: {'_cores': 3, '_nodes': 9223372036854775807, '_job_count': 9223372036854775807} Ready jobs: 1 Select jobs to execute... Selecting jobs to run using greedy solver. Selected jobs: 1 Resources after job selection: {'_cores': 2, '_nodes': 9223372036854775806, '_job_count': 9223372036854775807} Execute 1 jobs... [Fri Mar 21 17:36:39 2025] localrule b: input: test.txt (before update) output: out.txt jobid: 1 reason: Missing output files: out.txt resources: tmpdir=/tmp [Fri Mar 21 17:36:39 2025] Finished job 1. 1 of 2 steps (50%) done Resources before job selection: {'_cores': 3, '_nodes': 9223372036854775807, '_job_count': 9223372036854775807} Ready jobs: 1 Select jobs to execute... Selecting jobs to run using greedy solver. Selected jobs: 1 Resources after job selection: {'_cores': 2, '_nodes': 9223372036854775806, '_job_count': 9223372036854775807} Execute 1 jobs... [Fri Mar 21 17:36:39 2025] localrule all: input: out.txt, test.txt jobid: 0 reason: Input files updated by another job: out.txt resources: tmpdir=/tmp [Fri Mar 21 17:36:39 2025] Finished job 0. 2 of 2 steps (100%) done Complete log: .snakemake/log/2025-03-21T173639.765633.snakemake.log unlocking removing lock removing lock removed all locks ------------------------------ Captured log call ------------------------------- WARNING snakemake.logging:logging.py:625 Assuming unrestricted shared filesystem usage. INFO snakemake.logging:logging.py:540 host: 2dca7f2611bb4fc4b53c6adf76f741f8 WARNING snakemake.logging:logging.py:625 Building DAG of jobs... DEBUG snakemake.logging:logging.py:631 shared_storage_local_copies: True DEBUG snakemake.logging:logging.py:631 remote_exec: False WARNING snakemake.logging:logging.py:625 Using shell: /usr/bin/bash WARNING snakemake.logging:logging.py:633 Provided cores: 3 WARNING snakemake.logging:logging.py:633 Rules claiming more threads will be scaled down. WARNING snakemake.logging:logging.py:635 Job stats: job count ----- ------- all 1 b 1 total 2 DEBUG snakemake.logging:logging.py:631 Resources before job selection: {'_cores': 3, '_nodes': 9223372036854775807, '_job_count': 9223372036854775807} DEBUG snakemake.logging:logging.py:631 Ready jobs: 1 WARNING snakemake.logging:logging.py:625 Select jobs to execute... DEBUG snakemake.logging:logging.py:631 Selecting jobs to run using greedy solver. DEBUG snakemake.logging:logging.py:631 Selected jobs: 1 DEBUG snakemake.logging:logging.py:631 Resources after job selection: {'_cores': 2, '_nodes': 9223372036854775806, '_job_count': 9223372036854775807} WARNING snakemake.logging:logging.py:625 Execute 1 jobs... INFO snakemake.logging:logging.py:543 INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:36:39 2025] INFO snakemake.logging:logging.py:550 localrule b: input: test.txt (before update) output: out.txt jobid: 1 reason: Missing output files: out.txt resources: tmpdir=/tmp INFO snakemake.logging:logging.py:557 INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:36:39 2025] INFO snakemake.logging:logging.py:649 Finished job 1. INFO snakemake.logging:logging.py:639 1 of 2 steps (50%) done DEBUG snakemake.logging:logging.py:631 Resources before job selection: {'_cores': 3, '_nodes': 9223372036854775807, '_job_count': 9223372036854775807} DEBUG snakemake.logging:logging.py:631 Ready jobs: 1 WARNING snakemake.logging:logging.py:625 Select jobs to execute... DEBUG snakemake.logging:logging.py:631 Selecting jobs to run using greedy solver. DEBUG snakemake.logging:logging.py:631 Selected jobs: 1 DEBUG snakemake.logging:logging.py:631 Resources after job selection: {'_cores': 2, '_nodes': 9223372036854775806, '_job_count': 9223372036854775807} WARNING snakemake.logging:logging.py:625 Execute 1 jobs... INFO snakemake.logging:logging.py:543 INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:36:39 2025] INFO snakemake.logging:logging.py:550 localrule all: input: out.txt, test.txt jobid: 0 reason: Input files updated by another job: out.txt resources: tmpdir=/tmp INFO snakemake.logging:logging.py:557 INFO snakemake.logging:logging.py:535 [Fri Mar 21 17:36:39 2025] INFO snakemake.logging:logging.py:649 Finished job 0. INFO snakemake.logging:logging.py:639 2 of 2 steps (100%) done WARNING snakemake.logging:logging.py:625 Complete log: .snakemake/log/2025-03-21T173639.765633.snakemake.log DEBUG snakemake.logging:logging.py:631 unlocking DEBUG snakemake.logging:logging.py:631 removing lock DEBUG snakemake.logging:logging.py:631 removing lock DEBUG snakemake.logging:logging.py:631 removed all locks =============================== warnings summary =============================== tests/tests.py::test_list_untracked :488: DeprecationWarning: Type google.protobuf.pyext._message.ScalarMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/tests.py::test_list_untracked :488: DeprecationWarning: Type google.protobuf.pyext._message.MessageMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/tests.py::test_list_untracked /usr/lib64/python3.13/site-packages/google/protobuf/internal/well_known_types.py:92: DeprecationWarning: datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.fromtimestamp(timestamp, datetime.UTC). _EPOCH_DATETIME = datetime.utcfromtimestamp(0) tests/tests.py: 6 warnings tests/test_schema.py: 12 warnings /builddir/build/BUILD/snakemake-8.30.0-build/snakemake-8.30.0/snakemake/utils.py:52: DeprecationWarning: jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need. from jsonschema import validators, RefResolver -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========================== short test summary info ============================ FAILED tests/tests.py::test_group_job_resources_with_pipe - AssertionError: w... FAILED tests/tests.py::test_update_flag - AssertionError: wrong result produc... = 2 failed, 278 passed, 17 skipped, 21 deselected, 21 warnings in 409.96s (0:06:49) = cannot schedule new futures after shutdown RPM build errors: error: Bad exit status from /var/tmp/rpm-tmp.Mq3eNr (%check) Bad exit status from /var/tmp/rpm-tmp.Mq3eNr (%check) Finish: rpmbuild snakemake-8.30.0-1.fc43.src.rpm Finish: build phase for snakemake-8.30.0-1.fc43.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-s390x-1742578099.344400/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names ERROR: Exception(/var/lib/copr-rpmbuild/results/snakemake-8.30.0-1.fc43.src.rpm) Config(fedora-41-s390x) 8 minutes 4 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_failure=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot ERROR: Command failed: # /usr/bin/systemd-nspawn -q -M 2dca7f2611bb4fc4b53c6adf76f741f8 -D /var/lib/mock/fedora-41-s390x-1742578099.344400/root -a -u mockbuild --capability=cap_ipc_lock --rlimit=RLIMIT_NOFILE=10240 --capability=cap_ipc_lock --bind=/tmp/mock-resolv.9ocsc0ol:/etc/resolv.conf --bind=/dev/btrfs-control --bind=/dev/mapper/control --bind=/dev/fuse --bind=/dev/loop-control --bind=/dev/loop0 --bind=/dev/loop1 --bind=/dev/loop2 --bind=/dev/loop3 --bind=/dev/loop4 --bind=/dev/loop5 --bind=/dev/loop6 --bind=/dev/loop7 --bind=/dev/loop8 --bind=/dev/loop9 --bind=/dev/loop10 --bind=/dev/loop11 --console=pipe --setenv=TERM=vt100 --setenv=SHELL=/bin/bash --setenv=HOME=/builddir --setenv=HOSTNAME=mock --setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin '--setenv=PROMPT_COMMAND=printf "\033]0;\007"' '--setenv=PS1= \s-\v\$ ' --setenv=LANG=C.UTF-8 --resolv-conf=off bash --login -c '/usr/bin/rpmbuild -ba --noprep --target s390x /builddir/build/originals/snakemake.spec' Copr build error: Build failed