Mock Version: 1.1.41 ENTER do(['bash', '--login', '-c', 'rpmbuild -bs --target x86_64 --nodeps builddir/build/SPECS/nexus.spec'], False, '/var/lib/mock/epel-7-x86_64-mockbuilder-1704/root/', None, 0, True, False, 500, 135, None, False, {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'CCACHE_DIR': '/tmp/ccache', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n ""', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'CCACHE_UMASK': '002'}, logger=) Executing command: ['bash', '--login', '-c', 'rpmbuild -bs --target x86_64 --nodeps builddir/build/SPECS/nexus.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'CCACHE_DIR': '/tmp/ccache', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n ""', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'CCACHE_UMASK': '002'} warning: Could not canonicalize hostname: i-0001ec58 Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/nexus-4.3.3-1.el7.centos.src.rpm Child return code was: 0 LEAVE do --> ENTER do(['bash', '--login', '-c', 'rpmbuild -bb --target x86_64 --nodeps builddir/build/SPECS/nexus.spec'], False, '/var/lib/mock/epel-7-x86_64-mockbuilder-1704/root/', None, 0, True, False, 500, 135, None, False, {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'CCACHE_DIR': '/tmp/ccache', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n ""', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'CCACHE_UMASK': '002'}, logger=) Executing command: ['bash', '--login', '-c', 'rpmbuild -bb --target x86_64 --nodeps builddir/build/SPECS/nexus.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'CCACHE_DIR': '/tmp/ccache', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n ""', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'CCACHE_UMASK': '002'} Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.QhZVEQ + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf nexus-4.3.3 + /usr/bin/gzip -dc /builddir/build/SOURCES/nexus-4.3.3.tar.gz + /usr/bin/tar -xf - + STATUS=0 + '[' 0 -ne 0 ']' + cd nexus-4.3.3 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.JuwobG + umask 022 + cd /builddir/build/BUILD + cd nexus-4.3.3 + test -z '' + ./configure --with-java-home=/usr/lib/jvm/java/ --with-f90=gfortran --with-f77=gfortran --prefix=/usr --libdir=/usr/lib64 checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking target system type... x86_64-unknown-linux-gnu checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking how to create a pax tar archive... gnutar checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking for C compiler option -fno-common... yes checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... gcc3 checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking for Fortran 77 compiler option -I/builddir/build/BUILD/nexus-4.3.3/bindings/f77... yes checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../.. -lgfortran -lm -lquadmath checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../.. -lgfortran -lm -lquadmath checking for matlab... no checking for __thread... yes configure: Java SDK home is /usr/lib/jvm/java/ checking for javac... /usr/lib/jvm/java//bin/javac checking for java... /usr/lib/jvm/java//bin/java checking for javah... /usr/lib/jvm/java//bin/javah checking for javadoc... /usr/lib/jvm/java//bin/javadoc checking for jar... /usr/lib/jvm/java//bin/jar checking for uudecode... no configure: WARNING: I have to compile Test.class from scratch checking if /usr/lib/jvm/java//bin/javac works... yes checking if /usr/lib/jvm/java//bin/java works... yes checking for junit.textui.TestRunner class... no checking for junit... checking for gcj... no checking dependency style of gcj... none checking whether gcc and cc understand -c and -o together... yes checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1966080 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking dependency style of gcj... (cached) none checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... no checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... no checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if gcj supports -fno-rtti -fno-exceptions... (cached) no checking for gcj option to produce PIC... -fPIC checking if gcj PIC flag -fPIC works... no checking if gcj static flag -static works... no checking if gcj supports -c -o file.o... no checking if gcj supports -c -o file.o... (cached) no checking whether the gcj linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking whether make sets $(MAKE)... (cached) yes checking for ranlib... (cached) ranlib checking for python root installation directory... /usr checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib64/python2.7/site-packages checking for python module numpy... found checking for python module ctypes... found checking for docbook2pdf... no checking for docbook2txt... no checking for tclsh... no checking for guile... no checking for latex... no checking for wget... no checking for xmllint... xmllint checking for svn2cl... no checking for LIB... no checking for xmlParseFile in -lxml2... yes looking for ant checking for ant... no checking for location of HDF4 libraries... /usr checking for location of HDF5 libraries... /usr checking for location of mxml package... /usr checking for fprintf in -lSystemStubs... no checking for log in -lm... yes checking for xdr_float in -lrpc... no checking for dlopen in -ldl... yes checking for pthread_create in -lpthread... yes checking for gzopen in -lz... yes checking for jpeg_CreateCompress in -ljpeg... yes checking for SZ_Compress in -lsz... no checking for Hopen in -ldf... yes checking for SDcreate in -lmfhdf... yes checking for H5open in -lhdf5... yes checking for tputs in -ltermcap... yes checking for readline in -lreadline... yes checking for ANSI C header files... (cached) yes checking for sys/wait.h that is POSIX.1 compatible... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for stdint.h... (cached) yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking for int8_t... yes checking for uint8_t... yes checking for int16_t... yes checking for uint16_t... yes checking for int32_t... yes checking for uint32_t... yes checking for int64_t... yes checking for uint64_t... yes checking for unsigned long long int... yes checking for long long int... yes checking for unsigned long long int... (cached) yes checking size of int... 4 checking size of long int... 8 checking size of long long int... 8 checking whether struct tm is in sys/time.h or time.h... time.h checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for ftime... yes checking for memset... yes checking for strchr... yes checking for strdup... yes checking for strrchr... yes checking for strstr... yes checking for tzset... yes checking for mkstemp... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating test/Makefile config.status: creating test/atlocal config.status: creating Makefile config.status: creating nexus.spec config.status: creating build_rpm config.status: creating include/Makefile config.status: creating src/Makefile config.status: creating applications/Makefile config.status: creating applications/NXdir/Makefile config.status: creating applications/NXbrowse/Makefile config.status: creating applications/NXtraverse/Makefile config.status: creating applications/NXconvert/Makefile config.status: creating applications/NXvalidate/Makefile config.status: creating applications/NXvalidate/nxvalidate config.status: creating applications/NXdump/Makefile config.status: creating applications/nxingest/Makefile config.status: creating applications/NXsummary/Makefile config.status: creating applications/NXtranslate/Makefile config.status: creating applications/NXtranslate/FRM2/Makefile config.status: creating applications/NXtranslate/opengenie/Makefile config.status: creating applications/NXtranslate/text_collist/Makefile config.status: creating applications/NXtranslate/text_plain/Makefile config.status: creating applications/NXtranslate/text_xml/Makefile config.status: creating applications/NXtranslate/sns_histogram/Makefile config.status: creating applications/NXtranslate/loopy/Makefile config.status: creating applications/NXtranslate/binary/Makefile config.status: creating applications/NXtranslate/spec/Makefile config.status: creating applications/NXtranslate/esrf_edf/Makefile config.status: creating applications/NXtranslate/docs/Makefile config.status: creating examples/Makefile config.status: creating doc/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/api/Makefile config.status: creating doc/nxdict/Makefile config.status: creating doc/tech_ref/Makefile config.status: creating bindings/Makefile config.status: creating bindings/cpp/Makefile config.status: creating bindings/f77/Makefile config.status: creating bindings/f90/Makefile config.status: creating bindings/java/Makefile config.status: creating bindings/swig/Makefile config.status: creating bindings/idl/Makefile config.status: creating bindings/python/Makefile config.status: creating third_party/Makefile config.status: creating third_party/tclap/Makefile config.status: creating contrib/Makefile config.status: creating contrib/applications/Makefile config.status: creating contrib/applications/NXextract/Makefile config.status: creating contrib/applications/NXextract/src/Makefile config.status: creating contrib/applications/CBFLib/Makefile config.status: creating contrib/bindings/Makefile config.status: creating contrib/bindings/python/Makefile config.status: creating macosx_install_kit/Makefile config.status: creating macosx_install_kit/pkg.config config.status: creating scripts/Makefile config.status: creating scripts/nexus-config config.status: creating scripts/nexus.pc config.status: creating scripts/nexus-cpp.pc config.status: creating scripts/nxbuild config.status: creating include/nxconfig.h config.status: executing depfiles commands config.status: executing libtool commands config.status: executing test/atconfig commands Configuration (NeXus): Install prefix: /usr Source code location: . Version: 4.3.3- Compiler: gcc,g++,gfortran,gfortran build: NeXus with: HDF4 support: yes (4.2.10) HDF5 support: yes (1.8.12) XML support: yes bindings: C++ : yes (--with-cxx=g++) F77 : yes (--with-f77=gfortran) F90/F95 : yes (--with-f90=gfortran) JAVA: yes (--with-java-home=/usr/lib/jvm/java/, JAVA=/usr/lib/jvm/java//bin/java, JAVAC=/usr/lib/jvm/java//bin/javac, JAVAH=/usr/lib/jvm/java//bin/javah) SWIG: no IDL: no (--with-idlroot=, --with-idldlm=${prefix}/lib) MATLAB: no (--with-matlabroot=) PYTHON: yes (PYTHONROOT=/usr, numpy found: yes, ctypes found: yes) application tools: ant: libxml2: yes readline: yes documentation: Doxygen: no --with-doxygen not specified Docbook: no - missing docbook2txt docbook2pdf Please check whether the configuration I detected matches what you would like to have. If not, re-run configure adding the appropriate --with option or setting the relevant environment variable. For a list of available options type ./configure --help + make Making all in third_party make[1]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/third_party' Making all in tclap make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/third_party/tclap' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/third_party/tclap' make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/third_party' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/third_party' make[1]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/third_party' Making all in include make[1]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/include' make all-am make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/include' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/include' make[1]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/include' Making all in src make[1]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/src' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -prefer-pic -g -O2 -fno-strict-aliasing -Wall -MT napi.lo -MD -MP -MF .deps/napi.Tpo -c -o napi.lo napi.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT napi.lo -MD -MP -MF .deps/napi.Tpo -c napi.c -fPIC -DPIC -o .libs/napi.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT napi.lo -MD -MP -MF .deps/napi.Tpo -c napi.c -fPIC -DPIC -o napi.o >/dev/null 2>&1 mv -f .deps/napi.Tpo .deps/napi.Plo /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -prefer-pic -g -O2 -fno-strict-aliasing -Wall -MT napiu.lo -MD -MP -MF .deps/napiu.Tpo -c -o napiu.lo napiu.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT napiu.lo -MD -MP -MF .deps/napiu.Tpo -c napiu.c -fPIC -DPIC -o .libs/napiu.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT napiu.lo -MD -MP -MF .deps/napiu.Tpo -c napiu.c -fPIC -DPIC -o napiu.o >/dev/null 2>&1 mv -f .deps/napiu.Tpo .deps/napiu.Plo /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -prefer-pic -g -O2 -fno-strict-aliasing -Wall -MT nxstack.lo -MD -MP -MF .deps/nxstack.Tpo -c -o nxstack.lo nxstack.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT nxstack.lo -MD -MP -MF .deps/nxstack.Tpo -c nxstack.c -fPIC -DPIC -o .libs/nxstack.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT nxstack.lo -MD -MP -MF .deps/nxstack.Tpo -c nxstack.c -fPIC -DPIC -o nxstack.o >/dev/null 2>&1 mv -f .deps/nxstack.Tpo .deps/nxstack.Plo /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -prefer-pic -g -O2 -fno-strict-aliasing -Wall -MT stptok.lo -MD -MP -MF .deps/stptok.Tpo -c -o stptok.lo stptok.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT stptok.lo -MD -MP -MF .deps/stptok.Tpo -c stptok.c -fPIC -DPIC -o .libs/stptok.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT stptok.lo -MD -MP -MF .deps/stptok.Tpo -c stptok.c -fPIC -DPIC -o stptok.o >/dev/null 2>&1 mv -f .deps/stptok.Tpo .deps/stptok.Plo /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -prefer-pic -g -O2 -fno-strict-aliasing -Wall -MT nxdataset.lo -MD -MP -MF .deps/nxdataset.Tpo -c -o nxdataset.lo nxdataset.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT nxdataset.lo -MD -MP -MF .deps/nxdataset.Tpo -c nxdataset.c -fPIC -DPIC -o .libs/nxdataset.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT nxdataset.lo -MD -MP -MF .deps/nxdataset.Tpo -c nxdataset.c -fPIC -DPIC -o nxdataset.o >/dev/null 2>&1 mv -f .deps/nxdataset.Tpo .deps/nxdataset.Plo /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -prefer-pic -g -O2 -fno-strict-aliasing -Wall -MT napi4.lo -MD -MP -MF .deps/napi4.Tpo -c -o napi4.lo napi4.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT napi4.lo -MD -MP -MF .deps/napi4.Tpo -c napi4.c -fPIC -DPIC -o .libs/napi4.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT napi4.lo -MD -MP -MF .deps/napi4.Tpo -c napi4.c -fPIC -DPIC -o napi4.o >/dev/null 2>&1 mv -f .deps/napi4.Tpo .deps/napi4.Plo /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -prefer-pic -g -O2 -fno-strict-aliasing -Wall -MT napi5.lo -MD -MP -MF .deps/napi5.Tpo -c -o napi5.lo napi5.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT napi5.lo -MD -MP -MF .deps/napi5.Tpo -c napi5.c -fPIC -DPIC -o .libs/napi5.o napi5.c: In function 'NX5getdata': napi5.c:1806:13: warning: unused variable 'len' [-Wunused-variable] size_t len; ^ napi5.c: In function 'NX5getslab64': napi5.c:1928:13: warning: unused variable 'dims' [-Wunused-variable] size_t dims; ^ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT napi5.lo -MD -MP -MF .deps/napi5.Tpo -c napi5.c -fPIC -DPIC -o napi5.o >/dev/null 2>&1 mv -f .deps/napi5.Tpo .deps/napi5.Plo /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -prefer-pic -g -O2 -fno-strict-aliasing -Wall -MT nxxml.lo -MD -MP -MF .deps/nxxml.Tpo -c -o nxxml.lo nxxml.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT nxxml.lo -MD -MP -MF .deps/nxxml.Tpo -c nxxml.c -fPIC -DPIC -o .libs/nxxml.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT nxxml.lo -MD -MP -MF .deps/nxxml.Tpo -c nxxml.c -fPIC -DPIC -o nxxml.o >/dev/null 2>&1 mv -f .deps/nxxml.Tpo .deps/nxxml.Plo /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -prefer-pic -g -O2 -fno-strict-aliasing -Wall -MT nxio.lo -MD -MP -MF .deps/nxio.Tpo -c -o nxio.lo nxio.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT nxio.lo -MD -MP -MF .deps/nxio.Tpo -c nxio.c -fPIC -DPIC -o .libs/nxio.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../include -I../include -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -DIN_NEXUS_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT nxio.lo -MD -MP -MF .deps/nxio.Tpo -c nxio.c -fPIC -DPIC -o nxio.o >/dev/null 2>&1 mv -f .deps/nxio.Tpo .deps/nxio.Plo cp ./nexus_symbols.txt nexus_symbols.sym /bin/sh ../libtool --tag=CC --mode=link gcc -prefer-pic -g -O2 -fno-strict-aliasing -Wall -export-symbols nexus_symbols.sym -L/usr/lib64/hdf -lmfhdf -ldf -L/usr/lib64 -L/usr/lib -lhdf5 -lz -L/usr/lib -lmxml -version-info 5:0:5 -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libNeXus.la -rpath /usr/lib64 napi.lo napiu.lo nxstack.lo stptok.lo nxdataset.lo napi4.lo napi5.lo nxxml.lo nxio.lo -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: echo "{ global:" > .libs/libNeXus.ver libtool: link: cat nexus_symbols.sym | sed -e "s/$.*$/\1;/" >> .libs/libNeXus.ver libtool: link: echo "local: *; };" >> .libs/libNeXus.ver libtool: link: gcc -shared -fPIC -DPIC .libs/napi.o .libs/napiu.o .libs/nxstack.o .libs/stptok.o .libs/nxdataset.o .libs/napi4.o .libs/napi5.o .libs/nxxml.o .libs/nxio.o -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -lmxml -L/usr/local/lib -lhdf5 /usr/lib64/hdf/libmfhdf.a /usr/lib64/hdf/libdf.a -ljpeg -lz -lpthread -ldl -lm -O2 -Wl,-soname -Wl,libNeXus.so.0 -Wl,-version-script -Wl,.libs/libNeXus.ver -o .libs/libNeXus.so.0.5.0 libtool: link: (cd ".libs" && rm -f "libNeXus.so.0" && ln -s "libNeXus.so.0.5.0" "libNeXus.so.0") libtool: link: (cd ".libs" && rm -f "libNeXus.so" && ln -s "libNeXus.so.0.5.0" "libNeXus.so") libtool: link: ar cru .libs/libNeXus.a napi.o napiu.o nxstack.o stptok.o nxdataset.o napi4.o napi5.o nxxml.o nxio.o libtool: link: ranlib .libs/libNeXus.a libtool: link: ( cd ".libs" && rm -f "libNeXus.la" && ln -s "../libNeXus.la" "libNeXus.la" ) make[1]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/src' Making all in bindings make[1]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/bindings' Making all in cpp make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/bindings/cpp' /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -DIN_NEXUS_CPP_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -prefer-pic -g -O2 -fno-strict-aliasing -Wall -MT NeXusFile.lo -MD -MP -MF .deps/NeXusFile.Tpo -c -o NeXusFile.lo NeXusFile.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -DIN_NEXUS_CPP_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT NeXusFile.lo -MD -MP -MF .deps/NeXusFile.Tpo -c NeXusFile.cpp -fPIC -DPIC -o .libs/NeXusFile.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -DIN_NEXUS_CPP_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT NeXusFile.lo -MD -MP -MF .deps/NeXusFile.Tpo -c NeXusFile.cpp -fPIC -DPIC -o NeXusFile.o >/dev/null 2>&1 mv -f .deps/NeXusFile.Tpo .deps/NeXusFile.Plo /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -DIN_NEXUS_CPP_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -prefer-pic -g -O2 -fno-strict-aliasing -Wall -MT NeXusException.lo -MD -MP -MF .deps/NeXusException.Tpo -c -o NeXusException.lo NeXusException.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -DIN_NEXUS_CPP_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT NeXusException.lo -MD -MP -MF .deps/NeXusException.Tpo -c NeXusException.cpp -fPIC -DPIC -o .libs/NeXusException.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -DIN_NEXUS_CPP_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT NeXusException.lo -MD -MP -MF .deps/NeXusException.Tpo -c NeXusException.cpp -fPIC -DPIC -o NeXusException.o >/dev/null 2>&1 mv -f .deps/NeXusException.Tpo .deps/NeXusException.Plo /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -DIN_NEXUS_CPP_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -prefer-pic -g -O2 -fno-strict-aliasing -Wall -MT NeXusStream.lo -MD -MP -MF .deps/NeXusStream.Tpo -c -o NeXusStream.lo NeXusStream.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -DIN_NEXUS_CPP_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT NeXusStream.lo -MD -MP -MF .deps/NeXusStream.Tpo -c NeXusStream.cpp -fPIC -DPIC -o .libs/NeXusStream.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -DIN_NEXUS_CPP_LIBRARY=1 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT NeXusStream.lo -MD -MP -MF .deps/NeXusStream.Tpo -c NeXusStream.cpp -fPIC -DPIC -o NeXusStream.o >/dev/null 2>&1 mv -f .deps/NeXusStream.Tpo .deps/NeXusStream.Plo /bin/sh ../../libtool --tag=CXX --mode=link g++ -prefer-pic -g -O2 -fno-strict-aliasing -Wall -version-info 5:0:5 -L../../src/.libs -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libNeXusCPP.la -rpath /usr/lib64 NeXusFile.lo NeXusException.lo NeXusStream.lo ../../src/libNeXus.la -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.2/crtbeginS.o .libs/NeXusFile.o .libs/NeXusException.o .libs/NeXusStream.o -Wl,-rpath -Wl,/builddir/build/BUILD/nexus-4.3.3/src/.libs -L../../src/.libs -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib ../../src/.libs/libNeXus.so -lmxml -lhdf5 /usr/lib64/hdf/libmfhdf.a /usr/lib64/hdf/libdf.a -ljpeg -lz -lpthread -ldl -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/4.8.2/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../../../lib64/crtn.o -O2 -Wl,-soname -Wl,libNeXusCPP.so.0 -o .libs/libNeXusCPP.so.0.5.0 libtool: link: (cd ".libs" && rm -f "libNeXusCPP.so.0" && ln -s "libNeXusCPP.so.0.5.0" "libNeXusCPP.so.0") libtool: link: (cd ".libs" && rm -f "libNeXusCPP.so" && ln -s "libNeXusCPP.so.0.5.0" "libNeXusCPP.so") libtool: link: ar cru .libs/libNeXusCPP.a NeXusFile.o NeXusException.o NeXusStream.o libtool: link: ranlib .libs/libNeXusCPP.a libtool: link: ( cd ".libs" && rm -f "libNeXusCPP.la" && ln -s "../libNeXusCPP.la" "libNeXusCPP.la" ) make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/bindings/cpp' Making all in f77 make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/bindings/f77' /bin/sh ../../libtool --tag=F77 --mode=compile gfortran -g -O2 -I/builddir/build/BUILD/nexus-4.3.3/bindings/f77 -g -c -o napif.lo napif.f libtool: compile: gfortran -g -O2 -I/builddir/build/BUILD/nexus-4.3.3/bindings/f77 -g -c napif.f -fPIC -o .libs/napif.o libtool: compile: gfortran -g -O2 -I/builddir/build/BUILD/nexus-4.3.3/bindings/f77 -g -c napif.f -o napif.o >/dev/null 2>&1 /bin/sh ../../libtool --tag=F77 --mode=link gfortran -g -O2 -I/builddir/build/BUILD/nexus-4.3.3/bindings/f77 -g -version-info 5:0:5 -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libNeXus77.la -rpath /usr/lib64 napif.lo ../../src/libNeXus.la -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: gfortran -shared -fPIC .libs/napif.o -Wl,-rpath -Wl,/builddir/build/BUILD/nexus-4.3.3/src/.libs -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib ../../src/.libs/libNeXus.so -lmxml -lhdf5 /usr/lib64/hdf/libmfhdf.a /usr/lib64/hdf/libdf.a -ljpeg -lz -lpthread -ldl -lm -O2 -Wl,-soname -Wl,libNeXus77.so.0 -o .libs/libNeXus77.so.0.5.0 libtool: link: (cd ".libs" && rm -f "libNeXus77.so.0" && ln -s "libNeXus77.so.0.5.0" "libNeXus77.so.0") libtool: link: (cd ".libs" && rm -f "libNeXus77.so" && ln -s "libNeXus77.so.0.5.0" "libNeXus77.so") libtool: link: ar cru .libs/libNeXus77.a napif.o libtool: link: ranlib .libs/libNeXus77.a libtool: link: ( cd ".libs" && rm -f "libNeXus77.la" && ln -s "../libNeXus77.la" "libNeXus77.la" ) make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/bindings/f77' Making all in f90 make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/bindings/f90' /bin/sh ../../libtool --mode=compile --tag=F77 gfortran -g -I/builddir/build/BUILD/nexus-4.3.3/bindings/f90 -c -o NXmodule.lo `test -f 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-ldl -lm libtool: link: gcc -shared -fPIC -DPIC .libs/NXmodule.o .libs/NXUmodule.o -Wl,-rpath -Wl,/builddir/build/BUILD/nexus-4.3.3/src/.libs -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib ../../src/.libs/libNeXus.so -lmxml -lhdf5 /usr/lib64/hdf/libmfhdf.a /usr/lib64/hdf/libdf.a -ljpeg -lz -lpthread -ldl -lm -Wl,-soname -Wl,libNeXus90.so.0 -o .libs/libNeXus90.so.0.0.0 libtool: link: (cd ".libs" && rm -f "libNeXus90.so.0" && ln -s "libNeXus90.so.0.0.0" "libNeXus90.so.0") libtool: link: (cd ".libs" && rm -f "libNeXus90.so" && ln -s "libNeXus90.so.0.0.0" "libNeXus90.so") libtool: link: ar cru .libs/libNeXus90.a NXmodule.o NXUmodule.o libtool: link: ranlib .libs/libNeXus90.a libtool: link: ( cd ".libs" && rm -f "libNeXus90.la" && ln -s "../libNeXus90.la" "libNeXus90.la" ) make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/bindings/f90' Making all in java make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/bindings/java' /usr/lib/jvm/java//bin/javac -d . -classpath . ncsa/hdf/hdflib/HDFException.java /usr/lib/jvm/java//bin/javac -d . -classpath . ncsa/hdf/hdflib/HDFJavaException.java /usr/lib/jvm/java//bin/javac -d . -classpath . ncsa/hdf/hdflib/HDFConstants.java /usr/lib/jvm/java//bin/javac -d . -classpath . ncsa/hdf/hdflib/HDFNativeData.java /usr/lib/jvm/java//bin/javac -d . -classpath . ncsa/hdf/hdflib/HDFArray.java /usr/lib/jvm/java//bin/javac -d . -classpath . ncsa/hdf/hdflib/HDFNotImplementedException.java /usr/lib/jvm/java//bin/javac -d . -classpath . org/nexusformat/AttributeEntry.java /usr/lib/jvm/java//bin/javac -d . -classpath . org/nexusformat/NexusException.java /usr/lib/jvm/java//bin/javac -d . -classpath . org/nexusformat/NXlink.java /usr/lib/jvm/java//bin/javac -d . -classpath . org/nexusformat/NeXusFileInterface.java /usr/lib/jvm/java//bin/javac -d . -classpath . org/nexusformat/NexusFile.java Note: org/nexusformat/NexusFile.java uses unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. test -d apidoc || mkdir apidoc /usr/lib/jvm/java//bin/javadoc -d apidoc -windowtitle jnexus -doctitle jnexus -classpath . \ -sourcepath . org.nexusformat ncsa.hdf.hdflib Loading source files for package org.nexusformat... Loading source files for package ncsa.hdf.hdflib... Constructing Javadoc information... Standard Doclet version 1.7.0_71 Building tree for all the packages and classes... Generating apidoc/org/nexusformat/AttributeEntry.html... Generating apidoc/org/nexusformat/NexusException.html... Generating apidoc/org/nexusformat/NexusFile.html... Generating apidoc/org/nexusformat/NeXusFileInterface.html... Generating apidoc/org/nexusformat/NXlink.html... Generating apidoc/ncsa/hdf/hdflib/HDFArray.html... Generating apidoc/ncsa/hdf/hdflib/HDFConstants.html... Generating apidoc/ncsa/hdf/hdflib/HDFException.html... Generating apidoc/ncsa/hdf/hdflib/HDFJavaException.html... Generating apidoc/ncsa/hdf/hdflib/HDFNativeData.html... ./ncsa/hdf/hdflib/HDFNativeData.java:128: warning - @returns is an unknown tag. ./ncsa/hdf/hdflib/HDFNativeData.java:128: warning - Tag @see: reference not found: ncsa.hdf.hdfobject.HDFGR ./ncsa/hdf/hdflib/HDFNativeData.java:128: warning - Tag @see: reference not found: ncsa.hdf.hdfobject.HDFSDS Generating apidoc/ncsa/hdf/hdflib/HDFNotImplementedException.html... Generating apidoc/overview-frame.html... Generating apidoc/ncsa/hdf/hdflib/package-frame.html... Generating apidoc/ncsa/hdf/hdflib/package-summary.html... Generating apidoc/ncsa/hdf/hdflib/package-tree.html... Generating apidoc/org/nexusformat/package-frame.html... Generating apidoc/org/nexusformat/package-summary.html... Generating apidoc/org/nexusformat/package-tree.html... Generating apidoc/constant-values.html... Generating apidoc/serialized-form.html... Building index for all the packages and classes... Generating apidoc/overview-tree.html... Generating apidoc/index-all.html... Generating apidoc/deprecated-list.html... Building index for all classes... Generating apidoc/allclasses-frame.html... Generating apidoc/allclasses-noframe.html... Generating apidoc/index.html... Generating apidoc/overview-summary.html... Generating apidoc/help-doc.html... 3 warnings /usr/lib/jvm/java//bin/jar cvf jnexus.jar ncsa/hdf/hdflib/HDFException.class ncsa/hdf/hdflib/HDFJavaException.class ncsa/hdf/hdflib/HDFConstants.class ncsa/hdf/hdflib/HDFNativeData.class ncsa/hdf/hdflib/HDFArray.class ncsa/hdf/hdflib/HDFNotImplementedException.class org/nexusformat/AttributeEntry.class org/nexusformat/NexusException.class org/nexusformat/NXlink.class org/nexusformat/NeXusFileInterface.class org/nexusformat/NexusFile.class \ ncsa/hdf/hdflib/ArrayDescriptor.class added manifest adding: ncsa/hdf/hdflib/HDFException.class(in = 749) (out= 430)(deflated 42%) adding: ncsa/hdf/hdflib/HDFJavaException.class(in = 643) (out= 381)(deflated 40%) adding: ncsa/hdf/hdflib/HDFConstants.class(in = 5354) (out= 2268)(deflated 57%) adding: ncsa/hdf/hdflib/HDFNativeData.class(in = 3501) (out= 1699)(deflated 51%) adding: ncsa/hdf/hdflib/HDFArray.class(in = 13915) (out= 5712)(deflated 58%) adding: ncsa/hdf/hdflib/HDFNotImplementedException.class(in = 699) (out= 421)(deflated 39%) adding: org/nexusformat/AttributeEntry.class(in = 254) (out= 205)(deflated 19%) adding: org/nexusformat/NexusException.class(in = 759) (out= 434)(deflated 42%) adding: org/nexusformat/NXlink.class(in = 388) (out= 280)(deflated 27%) adding: org/nexusformat/NeXusFileInterface.class(in = 2118) (out= 693)(deflated 67%) adding: org/nexusformat/NexusFile.class(in = 13005) (out= 5218)(deflated 59%) adding: ncsa/hdf/hdflib/ArrayDescriptor.class(in = 3821) (out= 2210)(deflated 42%) test -d native || mkdir native /usr/lib/jvm/java//bin/javah -jni -d native -classpath . org.nexusformat.NexusFile make all-am make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/bindings/java' /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -I../../include -Inative -I/usr/lib/jvm/java//include -I/usr/lib/jvm/java//include/linux -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -g -O2 -fno-strict-aliasing -Wall -MT libjnexus_la-hdfnativeImp.lo -MD -MP -MF .deps/libjnexus_la-hdfnativeImp.Tpo -c -o libjnexus_la-hdfnativeImp.lo `test -f 'native/hdfnativeImp.c' || echo './'`native/hdfnativeImp.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -I../../include -Inative -I/usr/lib/jvm/java//include -I/usr/lib/jvm/java//include/linux -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -g -O2 -fno-strict-aliasing -Wall -MT libjnexus_la-hdfnativeImp.lo -MD -MP -MF .deps/libjnexus_la-hdfnativeImp.Tpo -c native/hdfnativeImp.c -fPIC -DPIC -o .libs/libjnexus_la-hdfnativeImp.o native/hdfnativeImp.c:34:24: warning: "/*" within comment [-Wcomment] /* #include "hdf.h" /* this only seems to be needed to define "intn" */ ^ native/hdfnativeImp.c: In function 'Java_ncsa_hdf_hdflib_HDFNativeData_byteToInt___3B': native/hdfnativeImp.c:46:7: warning: unused variable 'rval' [-Wunused-variable] intn rval; ^ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -I../../include -Inative -I/usr/lib/jvm/java//include -I/usr/lib/jvm/java//include/linux -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -g -O2 -fno-strict-aliasing -Wall -MT libjnexus_la-hdfnativeImp.lo -MD -MP -MF .deps/libjnexus_la-hdfnativeImp.Tpo -c native/hdfnativeImp.c -o libjnexus_la-hdfnativeImp.o >/dev/null 2>&1 mv -f .deps/libjnexus_la-hdfnativeImp.Tpo .deps/libjnexus_la-hdfnativeImp.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -I../../include -Inative -I/usr/lib/jvm/java//include -I/usr/lib/jvm/java//include/linux -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -g -O2 -fno-strict-aliasing -Wall -MT libjnexus_la-hdfexceptionImp.lo -MD -MP -MF .deps/libjnexus_la-hdfexceptionImp.Tpo -c -o libjnexus_la-hdfexceptionImp.lo `test -f 'native/hdfexceptionImp.c' || echo './'`native/hdfexceptionImp.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -I../../include -Inative -I/usr/lib/jvm/java//include -I/usr/lib/jvm/java//include/linux -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -g -O2 -fno-strict-aliasing -Wall -MT libjnexus_la-hdfexceptionImp.lo -MD -MP -MF .deps/libjnexus_la-hdfexceptionImp.Tpo -c native/hdfexceptionImp.c -fPIC -DPIC -o .libs/libjnexus_la-hdfexceptionImp.o native/hdfexceptionImp.c: In function 'buildException': native/hdfexceptionImp.c:30:5: warning: variable 'rval' set but not used [-Wunused-but-set-variable] int rval; ^ native/hdfexceptionImp.c: In function 'NotImplemented': native/hdfexceptionImp.c:58:5: warning: variable 'rval' set but not used [-Wunused-but-set-variable] int rval; ^ native/hdfexceptionImp.c: In function 'outOfMemory': native/hdfexceptionImp.c:87:5: warning: variable 'rval' set but not used [-Wunused-but-set-variable] int rval; ^ native/hdfexceptionImp.c: In function 'JNIFatalError': native/hdfexceptionImp.c:119:5: warning: variable 'rval' set but not used [-Wunused-but-set-variable] int rval; ^ native/hdfexceptionImp.c: In function 'raiseException': native/hdfexceptionImp.c:147:5: warning: variable 'rval' set but not used [-Wunused-but-set-variable] int rval; ^ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -I../../include -Inative -I/usr/lib/jvm/java//include -I/usr/lib/jvm/java//include/linux -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -g -O2 -fno-strict-aliasing -Wall -MT libjnexus_la-hdfexceptionImp.lo -MD -MP -MF .deps/libjnexus_la-hdfexceptionImp.Tpo -c native/hdfexceptionImp.c -o libjnexus_la-hdfexceptionImp.o >/dev/null 2>&1 mv -f .deps/libjnexus_la-hdfexceptionImp.Tpo .deps/libjnexus_la-hdfexceptionImp.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -I../../include -Inative -I/usr/lib/jvm/java//include -I/usr/lib/jvm/java//include/linux -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -g -O2 -fno-strict-aliasing -Wall -MT libjnexus_la-handle.lo -MD -MP -MF .deps/libjnexus_la-handle.Tpo -c -o libjnexus_la-handle.lo `test -f 'native/handle.c' || echo './'`native/handle.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -I../../include -Inative -I/usr/lib/jvm/java//include -I/usr/lib/jvm/java//include/linux -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -g -O2 -fno-strict-aliasing -Wall -MT libjnexus_la-handle.lo -MD -MP -MF .deps/libjnexus_la-handle.Tpo -c native/handle.c -fPIC -DPIC -o .libs/libjnexus_la-handle.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -I../../include -Inative -I/usr/lib/jvm/java//include -I/usr/lib/jvm/java//include/linux -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -g -O2 -fno-strict-aliasing -Wall -MT libjnexus_la-handle.lo -MD -MP -MF .deps/libjnexus_la-handle.Tpo -c native/handle.c -o libjnexus_la-handle.o >/dev/null 2>&1 mv -f .deps/libjnexus_la-handle.Tpo .deps/libjnexus_la-handle.Plo /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -I../../include -Inative -I/usr/lib/jvm/java//include -I/usr/lib/jvm/java//include/linux -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -g -O2 -fno-strict-aliasing -Wall -MT libjnexus_la-NexusFile.lo -MD -MP -MF .deps/libjnexus_la-NexusFile.Tpo -c -o libjnexus_la-NexusFile.lo `test -f 'native/NexusFile.c' || echo './'`native/NexusFile.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -I../../include -Inative -I/usr/lib/jvm/java//include -I/usr/lib/jvm/java//include/linux -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -g -O2 -fno-strict-aliasing -Wall -MT libjnexus_la-NexusFile.lo -MD -MP -MF .deps/libjnexus_la-NexusFile.Tpo -c native/NexusFile.c -fPIC -DPIC -o .libs/libjnexus_la-NexusFile.o native/NexusFile.c: In function 'Java_org_nexusformat_NexusFile_nxgetpath': native/NexusFile.c:317:9: warning: unused variable 'iRet' [-Wunused-variable] int iRet; ^ native/NexusFile.c: In function 'Java_org_nexusformat_NexusFile_nxclosegroup': native/NexusFile.c:340:9: warning: unused variable 'iRet' [-Wunused-variable] int iRet; ^ native/NexusFile.c: In function 'Java_org_nexusformat_NexusFile_nxclosedata': native/NexusFile.c:535:9: warning: unused variable 'iRet' [-Wunused-variable] int iRet; ^ native/NexusFile.c: In function 'Java_org_nexusformat_NexusFile_nxcompress': native/NexusFile.c:554:9: warning: unused variable 'iRet' [-Wunused-variable] int iRet; ^ native/NexusFile.c: In function 'Java_org_nexusformat_NexusFile_initattrdir': native/NexusFile.c:1546:9: warning: unused variable 'iRet' [-Wunused-variable] int iRet; ^ native/NexusFile.c: In function 'Java_org_nexusformat_NexusFile_initgroupdir': native/NexusFile.c:1563:9: warning: unused variable 'iRet' [-Wunused-variable] int iRet; ^ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -I../../include -Inative -I/usr/lib/jvm/java//include -I/usr/lib/jvm/java//include/linux -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -g -O2 -fno-strict-aliasing -Wall -MT libjnexus_la-NexusFile.lo -MD -MP -MF .deps/libjnexus_la-NexusFile.Tpo -c native/NexusFile.c -o libjnexus_la-NexusFile.o >/dev/null 2>&1 mv -f .deps/libjnexus_la-NexusFile.Tpo .deps/libjnexus_la-NexusFile.Plo /bin/sh ../../libtool --tag=CC --mode=link gcc -I../../include -Inative -I/usr/lib/jvm/java//include -I/usr/lib/jvm/java//include/linux -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -g -O2 -fno-strict-aliasing -Wall -version-info 5:0:5 -L../../src/.libs -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libjnexus.la -rpath /usr/lib64 libjnexus_la-hdfnativeImp.lo libjnexus_la-hdfexceptionImp.lo libjnexus_la-handle.lo libjnexus_la-NexusFile.lo ../../src/libNeXus.la -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: gcc -shared -fPIC -DPIC .libs/libjnexus_la-hdfnativeImp.o .libs/libjnexus_la-hdfexceptionImp.o .libs/libjnexus_la-handle.o .libs/libjnexus_la-NexusFile.o -Wl,-rpath -Wl,/builddir/build/BUILD/nexus-4.3.3/src/.libs -L../../src/.libs -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib ../../src/.libs/libNeXus.so -lmxml -lhdf5 /usr/lib64/hdf/libmfhdf.a /usr/lib64/hdf/libdf.a -ljpeg -lz -lpthread -ldl -lm -O2 -Wl,-soname -Wl,libjnexus.so.0 -o .libs/libjnexus.so.0.5.0 libtool: link: (cd ".libs" && rm -f "libjnexus.so.0" && ln -s "libjnexus.so.0.5.0" "libjnexus.so.0") libtool: link: (cd ".libs" && rm -f "libjnexus.so" && ln -s "libjnexus.so.0.5.0" "libjnexus.so") libtool: link: ar cru .libs/libjnexus.a libjnexus_la-hdfnativeImp.o libjnexus_la-hdfexceptionImp.o libjnexus_la-handle.o libjnexus_la-NexusFile.o libtool: link: ranlib .libs/libjnexus.a libtool: link: ( cd ".libs" && rm -f "libjnexus.la" && ln -s "../libjnexus.la" "libjnexus.la" ) CLASSPATH=.:./.${CLASSPATH:+":$CLASSPATH"} /usr/lib/jvm/java//bin/javac -d . -classpath . ncsa/hdf/hdflib/HDFArray.java ncsa/hdf/hdflib/HDFConstants.java ncsa/hdf/hdflib/HDFException.java ncsa/hdf/hdflib/HDFJavaException.java ncsa/hdf/hdflib/HDFNativeData.java ncsa/hdf/hdflib/HDFNotImplementedException.java org/nexusformat/AttributeEntry.java org/nexusformat/NXlink.java org/nexusformat/NeXusFileInterface.java org/nexusformat/NexusException.java org/nexusformat/NexusFile.java test/TestJapi.java Note: org/nexusformat/NexusFile.java uses unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. echo timestamp > classnoinst.stamp /usr/lib/jvm/java//bin/jar cvf jnexus.jar ncsa/hdf/hdflib/HDFException.class ncsa/hdf/hdflib/HDFJavaException.class ncsa/hdf/hdflib/HDFConstants.class ncsa/hdf/hdflib/HDFNativeData.class ncsa/hdf/hdflib/HDFArray.class ncsa/hdf/hdflib/HDFNotImplementedException.class org/nexusformat/AttributeEntry.class org/nexusformat/NexusException.class org/nexusformat/NXlink.class org/nexusformat/NeXusFileInterface.class org/nexusformat/NexusFile.class \ ncsa/hdf/hdflib/ArrayDescriptor.class added manifest adding: ncsa/hdf/hdflib/HDFException.class(in = 749) (out= 430)(deflated 42%) adding: ncsa/hdf/hdflib/HDFJavaException.class(in = 643) (out= 381)(deflated 40%) adding: ncsa/hdf/hdflib/HDFConstants.class(in = 5354) (out= 2268)(deflated 57%) adding: ncsa/hdf/hdflib/HDFNativeData.class(in = 3501) (out= 1699)(deflated 51%) adding: ncsa/hdf/hdflib/HDFArray.class(in = 13920) (out= 5716)(deflated 58%) adding: ncsa/hdf/hdflib/HDFNotImplementedException.class(in = 699) (out= 421)(deflated 39%) adding: org/nexusformat/AttributeEntry.class(in = 254) (out= 205)(deflated 19%) adding: org/nexusformat/NexusException.class(in = 759) (out= 434)(deflated 42%) adding: org/nexusformat/NXlink.class(in = 388) (out= 280)(deflated 27%) adding: org/nexusformat/NeXusFileInterface.class(in = 2118) (out= 693)(deflated 67%) adding: org/nexusformat/NexusFile.class(in = 13010) (out= 5225)(deflated 59%) adding: ncsa/hdf/hdflib/ArrayDescriptor.class(in = 3826) (out= 2212)(deflated 42%) test -d native || mkdir native /usr/lib/jvm/java//bin/javah -jni -d native -classpath . org.nexusformat.NexusFile make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/bindings/java' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/bindings/java' Making all in python make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/bindings/python' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/bindings/python' make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/bindings' make[2]: Nothing to be done for `all-am'. make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/bindings' make[1]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/bindings' Making all in applications make[1]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications' Making all in NXbrowse make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXbrowse' gcc -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -I/usr/include/readline -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT NXbrowse.o -MD -MP -MF .deps/NXbrowse.Tpo -c -o NXbrowse.o NXbrowse.c mv -f .deps/NXbrowse.Tpo .deps/NXbrowse.Po /bin/sh ../../libtool --tag=CC --mode=link gcc -g -O2 -fno-strict-aliasing -Wall -static -L/usr/lib64/hdf -lmfhdf -ldf -L/usr/lib64 -L/usr/lib -lhdf5 -lz -L/usr/lib -lmxml -lreadline -ltermcap -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o nxbrowse NXbrowse.o ../../src/libNeXus.la -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: gcc -g -O2 -fno-strict-aliasing -Wall -o nxbrowse NXbrowse.o -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -lreadline -ltermcap -L/usr/local/lib ../../src/.libs/libNeXus.a -lmxml -lhdf5 /usr/lib64/hdf/libmfhdf.a /usr/lib64/hdf/libdf.a -ljpeg -lz -lpthread -ldl -lm make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXbrowse' Making all in NXdir make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXdir' g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT main.o -MD -MP -MF .deps/main.Tpo -c -o main.o main.cpp mv -f .deps/main.Tpo .deps/main.Po g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT string_util.o -MD -MP -MF .deps/string_util.Tpo -c -o string_util.o string_util.cpp mv -f .deps/string_util.Tpo .deps/string_util.Po g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT tree.o -MD -MP -MF .deps/tree.Tpo -c -o tree.o tree.cpp tree.cpp: In function 'Tree build_res_rel_tree(NXhandle, Path, StrVecIter, StrVecIter)': tree.cpp:439:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if(num_open!=path.size()){ ^ tree.cpp:450:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if(num_close!=path.size()) ^ tree.cpp: In function 'bool has_all_res(const Path&, const StringVector&)': tree.cpp:626:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] return (restrict.size()==num); ^ tree.cpp: In function 'bool path_is_okay(Path, StringVector)': tree.cpp:694:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i=0 ; i/dev/null 2>&1 mv -f .deps/nxconvert_common.Tpo .deps/nxconvert_common.Plo /bin/sh ../../libtool --tag=CXX --mode=link g++ -g -O2 -fno-strict-aliasing -Wall -L../../bindings/cpp/.libs -L../../src/.libs -L/usr/lib64/hdf -lmfhdf -ldf -L/usr/lib64 -L/usr/lib -lhdf5 -lz -L/usr/lib -lmxml -version-info 5:0:5 -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libnxconvert.la -rpath /usr/lib64 nxconvert_common.lo ../../bindings/cpp/libNeXusCPP.la ../../src/libNeXus.la -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.2/crtbeginS.o .libs/nxconvert_common.o -Wl,-rpath -Wl,/builddir/build/BUILD/nexus-4.3.3/bindings/cpp/.libs -Wl,-rpath -Wl,/builddir/build/BUILD/nexus-4.3.3/src/.libs -L/builddir/build/BUILD/nexus-4.3.3/src/.libs -L../../bindings/cpp/.libs -L../../src/.libs -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib ../../bindings/cpp/.libs/libNeXusCPP.so /builddir/build/BUILD/nexus-4.3.3/src/.libs/libNeXus.so ../../src/.libs/libNeXus.so -lmxml -lhdf5 /usr/lib64/hdf/libmfhdf.a /usr/lib64/hdf/libdf.a -ljpeg -lz -lpthread -ldl -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/4.8.2/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../../../lib64/crtn.o -O2 -Wl,-soname -Wl,libnxconvert.so.0 -o .libs/libnxconvert.so.0.5.0 libtool: link: (cd ".libs" && rm -f "libnxconvert.so.0" && ln -s "libnxconvert.so.0.5.0" "libnxconvert.so.0") libtool: link: (cd ".libs" && rm -f "libnxconvert.so" && ln -s "libnxconvert.so.0.5.0" "libnxconvert.so") libtool: link: ar cru .libs/libnxconvert.a nxconvert_common.o libtool: link: ranlib .libs/libnxconvert.a libtool: link: ( cd ".libs" && rm -f "libnxconvert.la" && ln -s "../libnxconvert.la" "libnxconvert.la" ) g++ -DHAVE_CONFIG_H -I. -I../../include -I. -DNXCONVERT_EXPORTS -I../../include -I../../bindings/cpp -I../../third_party -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT nxconvert.o -MD -MP -MF .deps/nxconvert.Tpo -c -o nxconvert.o nxconvert.cpp mv -f .deps/nxconvert.Tpo .deps/nxconvert.Po /bin/sh ../../libtool --tag=CXX --mode=link g++ -g -O2 -fno-strict-aliasing -Wall -static -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -L/usr/lib64/hdf -lmfhdf -ldf -L/usr/lib64 -L/usr/lib -lhdf5 -lz -L/usr/lib -lmxml -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o nxconvert nxconvert.o libnxconvert.la ../../src/libNeXus.la -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: g++ -g -O2 -fno-strict-aliasing -Wall -o nxconvert nxconvert.o -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib ./.libs/libnxconvert.a -L../../bindings/cpp/.libs -L../../src/.libs /builddir/build/BUILD/nexus-4.3.3/bindings/cpp/.libs/libNeXusCPP.a /builddir/build/BUILD/nexus-4.3.3/src/.libs/libNeXus.a ../../src/.libs/libNeXus.a -lmxml -lhdf5 /usr/lib64/hdf/libmfhdf.a /usr/lib64/hdf/libdf.a -ljpeg -lz -lpthread -ldl -lm make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXconvert' Making all in NXdump make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXdump' gfortran -I../../bindings/f90 -g -I/builddir/build/BUILD/nexus-4.3.3/bindings/f90 -c NXdump.f90 /bin/sh ../../libtool --mode=link --tag=CC gfortran -I../../bindings/f90 -g -I/builddir/build/BUILD/nexus-4.3.3/bindings/f90 -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o NXdump NXdump.o ../../bindings/f90/libNeXus90.la -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: gfortran -I../../bindings/f90 -g -I/builddir/build/BUILD/nexus-4.3.3/bindings/f90 -o .libs/NXdump NXdump.o -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib ../../bindings/f90/.libs/libNeXus90.so /builddir/build/BUILD/nexus-4.3.3/src/.libs/libNeXus.so -lmxml -lhdf5 /usr/lib64/hdf/libmfhdf.a /usr/lib64/hdf/libdf.a -ljpeg -lz -lpthread -ldl -lm make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXdump' Making all in NXtranslate make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate' Making all in text_collist make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_collist' /bin/sh ../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT collist_retriever.lo -MD -MP -MF .deps/collist_retriever.Tpo -c -o collist_retriever.lo collist_retriever.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT collist_retriever.lo -MD -MP -MF .deps/collist_retriever.Tpo -c collist_retriever.cpp -fPIC -DPIC -o .libs/collist_retriever.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT collist_retriever.lo -MD -MP -MF .deps/collist_retriever.Tpo -c collist_retriever.cpp -o collist_retriever.o >/dev/null 2>&1 mv -f .deps/collist_retriever.Tpo .deps/collist_retriever.Plo /bin/sh ../../../libtool --tag=CXX --mode=link g++ -g -O2 -fno-strict-aliasing -Wall -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libTextCollist.la collist_retriever.lo -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: ar cru .libs/libTextCollist.a .libs/collist_retriever.o libtool: link: ranlib .libs/libTextCollist.a libtool: link: ( cd ".libs" && rm -f "libTextCollist.la" && ln -s "../libTextCollist.la" "libTextCollist.la" ) make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_collist' Making all in text_plain make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_plain' /bin/sh ../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT retriever.lo -MD -MP -MF .deps/retriever.Tpo -c -o retriever.lo retriever.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT retriever.lo -MD -MP -MF .deps/retriever.Tpo -c retriever.cpp -fPIC -DPIC -o .libs/retriever.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT retriever.lo -MD -MP -MF .deps/retriever.Tpo -c retriever.cpp -o retriever.o >/dev/null 2>&1 mv -f .deps/retriever.Tpo .deps/retriever.Plo /bin/sh ../../../libtool --tag=CXX --mode=link g++ -g -O2 -fno-strict-aliasing -Wall -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libTextPlain.la retriever.lo -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: ar cru .libs/libTextPlain.a .libs/retriever.o libtool: link: ranlib .libs/libTextPlain.a libtool: link: ( cd ".libs" && rm -f "libTextPlain.la" && ln -s "../libTextPlain.la" "libTextPlain.la" ) make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_plain' Making all in text_xml make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_xml' /bin/sh ../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include `xml2-config --cflags` -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT xml_retriever.lo -MD -MP -MF .deps/xml_retriever.Tpo -c -o xml_retriever.lo xml_retriever.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -I/usr/include/libxml2 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT xml_retriever.lo -MD -MP -MF .deps/xml_retriever.Tpo -c xml_retriever.cpp -fPIC -DPIC -o .libs/xml_retriever.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -I/usr/include/libxml2 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT xml_retriever.lo -MD -MP -MF .deps/xml_retriever.Tpo -c xml_retriever.cpp -o xml_retriever.o >/dev/null 2>&1 mv -f .deps/xml_retriever.Tpo .deps/xml_retriever.Plo /bin/sh ../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include `xml2-config --cflags` -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT xml_retriever_dom.lo -MD -MP -MF .deps/xml_retriever_dom.Tpo -c -o xml_retriever_dom.lo xml_retriever_dom.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -I/usr/include/libxml2 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT xml_retriever_dom.lo -MD -MP -MF .deps/xml_retriever_dom.Tpo -c xml_retriever_dom.cpp -fPIC -DPIC -o .libs/xml_retriever_dom.o xml_retriever_dom.cpp: In function 'void my_error(void*, const char*, ...)': xml_retriever_dom.cpp:171:7: warning: unused variable 'num_out' [-Wunused-variable] int num_out=vsprintf(str,msg,args); ^ xml_retriever_dom.cpp: In function 'void my_fatalError(void*, const char*, ...)': xml_retriever_dom.cpp:194:7: warning: unused variable 'num_out' [-Wunused-variable] int num_out=vsprintf(str,msg,args); ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -I/usr/include/libxml2 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT xml_retriever_dom.lo -MD -MP -MF .deps/xml_retriever_dom.Tpo -c xml_retriever_dom.cpp -o xml_retriever_dom.o >/dev/null 2>&1 mv -f .deps/xml_retriever_dom.Tpo .deps/xml_retriever_dom.Plo /bin/sh ../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include `xml2-config --cflags` -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT void_copy.lo -MD -MP -MF .deps/void_copy.Tpo -c -o void_copy.lo void_copy.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -I/usr/include/libxml2 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT void_copy.lo -MD -MP -MF .deps/void_copy.Tpo -c void_copy.cpp -fPIC -DPIC -o .libs/void_copy.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -I/usr/include/libxml2 -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT void_copy.lo -MD -MP -MF .deps/void_copy.Tpo -c void_copy.cpp -o void_copy.o >/dev/null 2>&1 mv -f .deps/void_copy.Tpo .deps/void_copy.Plo /bin/sh ../../../libtool --tag=CXX --mode=link g++ -g -O2 -fno-strict-aliasing -Wall -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libTextXML.la xml_retriever.lo xml_retriever_dom.lo void_copy.lo -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: ar cru .libs/libTextXML.a .libs/xml_retriever.o .libs/xml_retriever_dom.o .libs/void_copy.o libtool: link: ranlib .libs/libTextXML.a libtool: link: ( cd ".libs" && rm -f "libTextXML.la" && ln -s "../libTextXML.la" "libTextXML.la" ) make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_xml' Making all in sns_histogram make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/sns_histogram' /bin/sh ../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT string_location_format.lo -MD -MP -MF .deps/string_location_format.Tpo -c -o string_location_format.lo string_location_format.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT string_location_format.lo -MD -MP -MF .deps/string_location_format.Tpo -c string_location_format.cpp -fPIC -DPIC -o .libs/string_location_format.o In file included from string_location_format.cpp:1:0: string_location_format.h:32:1: warning: "/*" within comment [-Wcomment] /*********************************/ ^ string_location_format.h:119:1: warning: "/*" within comment [-Wcomment] /*********************************/ ^ string_location_format.cpp:86:1: warning: "/*" within comment [-Wcomment] /*********************************/ ^ string_location_format.cpp:331:1: warning: "/*" within comment [-Wcomment] /*********************************/ ^ string_location_format.cpp: In function 'void DeclaDef_separator(std::string&, std::vector >&)': string_location_format.cpp:72:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (taille == Dposition+1) ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT string_location_format.lo -MD -MP -MF .deps/string_location_format.Tpo -c string_location_format.cpp -o string_location_format.o >/dev/null 2>&1 mv -f .deps/string_location_format.Tpo .deps/string_location_format.Plo /bin/sh ../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT SNS_retriever.lo -MD -MP -MF .deps/SNS_retriever.Tpo -c -o SNS_retriever.lo SNS_retriever.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT SNS_retriever.lo -MD -MP -MF .deps/SNS_retriever.Tpo -c SNS_retriever.cpp -fPIC -DPIC -o .libs/SNS_retriever.o In file included from retriever.hpp:15:0, from SNS_retriever.cpp:1: string_location_format.h:32:1: warning: "/*" within comment [-Wcomment] /*********************************/ ^ string_location_format.h:119:1: warning: "/*" within comment [-Wcomment] /*********************************/ ^ SNS_retriever.cpp:15:1: warning: "/*" within comment [-Wcomment] /*********************************/ ^ SNS_retriever.cpp:28:1: warning: "/*" within comment [-Wcomment] /*********************************/ ^ SNS_retriever.cpp:156:1: warning: "/*" within comment [-Wcomment] /*********************************/ ^ SNS_retriever.cpp: In member function 'virtual void SnsHistogramRetriever::getData(const string&, tree&)': SNS_retriever.cpp:123:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i=0; i&)': SNS_retriever.cpp:253:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] while (b <= def.size()) ^ SNS_retriever.cpp:260:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (b==def.size()) ^ SNS_retriever.cpp: In function 'void parse_declaration_array(std::vector >&, std::vector&, std::vector&)': SNS_retriever.cpp:290:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] while (b <= LocGlobArray[i].size()) ^ SNS_retriever.cpp:297:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (b==LocGlobArray[i].size()) ^ SNS_retriever.cpp:312:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] while (b <= LocGlobArray[i].size()) ^ SNS_retriever.cpp:319:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (b==LocGlobArray[i].size()) ^ SNS_retriever.cpp: In function 'void calculate_array(std::vector&, std::vector&, binary_type*, std::vector >, std::vector&, tree&, std::vector >&, std::vector >&, std::vector&, std::vector&, std::vector&)': SNS_retriever.cpp:373:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i=0 ; i&)': SNS_retriever.cpp:510:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i=0 ; i&, std::vector&, int)': SNS_retriever.cpp:1006:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int j=0 ; j&, std::vector&, int)': SNS_retriever.cpp:1032:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int j=0 ; j&, std::vector&, int)': SNS_retriever.cpp:1141:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int x=0 ; x&, std::vector&, int)': SNS_retriever.cpp:1171:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int x=0 ; x&, std::vector&, int)': SNS_retriever.cpp:1281:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int y=0 ; y&, std::vector&, int)': SNS_retriever.cpp:1312:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int y=0 ; y&, std::vector&, int)': SNS_retriever.cpp:1430:65: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int tbin=0 ; tbin&, std::vector&, int)': SNS_retriever.cpp:1460:65: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int tbin=0 ; tbin/dev/null 2>&1 mv -f .deps/SNS_retriever.Tpo .deps/SNS_retriever.Plo /bin/sh ../../../libtool --tag=CXX --mode=link g++ -g -O2 -fno-strict-aliasing -Wall -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libSNShistogram.la string_location_format.lo SNS_retriever.lo -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: ar cru .libs/libSNShistogram.a .libs/string_location_format.o .libs/SNS_retriever.o libtool: link: ranlib .libs/libSNShistogram.a libtool: link: ( cd ".libs" && rm -f "libSNShistogram.la" && ln -s "../libSNShistogram.la" "libSNShistogram.la" ) make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/sns_histogram' Making all in docs make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/docs' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/docs' Making all in FRM2 make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/FRM2' /bin/sh ../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT frm2_retriever.lo -MD -MP -MF .deps/frm2_retriever.Tpo -c -o frm2_retriever.lo frm2_retriever.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT frm2_retriever.lo -MD -MP -MF .deps/frm2_retriever.Tpo -c frm2_retriever.cpp -fPIC -DPIC -o .libs/frm2_retriever.o frm2_retriever.cpp: In function 'std::string read_line(std::ifstream&)': frm2_retriever.cpp:302:6: warning: unused variable 'state' [-Wunused-variable] int state = file.rdstate(); ^ frm2_retriever.cpp: In function 'int count_chars(std::string, char)': frm2_retriever.cpp:313:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i=0; i space_count) { ^ frm2_retriever.cpp: In member function 'void Frm2Retriever::extract_toflogheaders(std::ifstream&)': frm2_retriever.cpp:755:6: warning: unused variable 'i' [-Wunused-variable] int i=0; ^ frm2_retriever.cpp: In member function 'std::map, std::basic_string > Frm2Retriever::extract_dictarray(std::ifstream&, std::string, unsigned int)': frm2_retriever.cpp:889:6: warning: unused variable 'i' [-Wunused-variable] int i=0; ^ frm2_retriever.cpp: In member function 'std::vector > Frm2Retriever::extract_tofcts(std::ifstream&, std::string, unsigned int, bool)': frm2_retriever.cpp:989:6: warning: unused variable 'i' [-Wunused-variable] int i=0, count=0; ^ frm2_retriever.cpp: In member function 'std::vector Frm2Retriever::extract_toftof(std::ifstream&, std::string, unsigned int, bool)': frm2_retriever.cpp:1064:6: warning: unused variable 'i' [-Wunused-variable] int i=0; ^ frm2_retriever.cpp: In member function 'std::vector Frm2Retriever::extract_desc(std::ifstream&, std::string, unsigned int)': frm2_retriever.cpp:1137:6: warning: unused variable 'i' [-Wunused-variable] int i=0; ^ frm2_retriever.cpp: In member function 'std::map, std::basic_string > Frm2Retriever::extract_dictentry(std::ifstream&, std::string, unsigned int)': frm2_retriever.cpp:1266:6: warning: unused variable 'i' [-Wunused-variable] int i=0; ^ frm2_retriever.cpp: In member function 'std::vector Frm2Retriever::extract_dnr(std::ifstream&, std::string, unsigned int)': frm2_retriever.cpp:1476:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (count != monitor_number) { ^ frm2_retriever.cpp:1449:15: warning: unused variable 'i' [-Wunused-variable] unsigned int i=0, count=0; ^ frm2_retriever.cpp: In member function 'std::string Frm2Retriever::extract_header(std::ifstream&, std::string, unsigned int, unsigned int, unsigned int)': frm2_retriever.cpp:1533:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int j=word; j Frm2Retriever::extract_heidi_counts(std::ifstream&, int, bool)': frm2_retriever.cpp:1774:53: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (unsigned int i=0; i<((entry_num*(nlines+2))-1); i++) { ^ frm2_retriever.cpp:1803:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int j=0; j >, unsigned int, std::string)': frm2_retriever.cpp:2448:11: warning: unused variable 'ft' [-Wunused-variable] float ft = static_cast(string_util::str_to_float(values.at(i))); ^ frm2_retriever.cpp: In member function 'virtual void Frm2Retriever::getData(const string&, tree&)': frm2_retriever.cpp:2543:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (units.size()>unit_pos) { ^ frm2_retriever.cpp:2907:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int ii=0; ii< values.size(); ii++) { ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT frm2_retriever.lo -MD -MP -MF .deps/frm2_retriever.Tpo -c frm2_retriever.cpp -o frm2_retriever.o >/dev/null 2>&1 mv -f .deps/frm2_retriever.Tpo .deps/frm2_retriever.Plo /bin/sh ../../../libtool --tag=CXX --mode=link g++ -g -O2 -fno-strict-aliasing -Wall -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libFRM2.la frm2_retriever.lo -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: ar cru .libs/libFRM2.a .libs/frm2_retriever.o libtool: link: ranlib .libs/libFRM2.a libtool: link: ( cd ".libs" && rm -f "libFRM2.la" && ln -s "../libFRM2.la" "libFRM2.la" ) make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/FRM2' Making all in loopy make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/loopy' /bin/sh ../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT retriever.lo -MD -MP -MF .deps/retriever.Tpo -c -o retriever.lo retriever.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT retriever.lo -MD -MP -MF .deps/retriever.Tpo -c retriever.cpp -fPIC -DPIC -o .libs/retriever.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT retriever.lo -MD -MP -MF .deps/retriever.Tpo -c retriever.cpp -o retriever.o >/dev/null 2>&1 mv -f .deps/retriever.Tpo .deps/retriever.Plo /bin/sh ../../../libtool --tag=CXX --mode=link g++ -g -O2 -fno-strict-aliasing -Wall -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libLoopy.la retriever.lo -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: ar cru .libs/libLoopy.a .libs/retriever.o libtool: link: ranlib .libs/libLoopy.a libtool: link: ( cd ".libs" && rm -f "libLoopy.la" && ln -s "../libLoopy.la" "libLoopy.la" ) make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/loopy' Making all in binary make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/binary' /bin/sh ../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -I../../../applications/NXtranslate -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT BinaryRetriever.lo -MD -MP -MF .deps/BinaryRetriever.Tpo -c -o BinaryRetriever.lo BinaryRetriever.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -I../../../applications/NXtranslate -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT BinaryRetriever.lo -MD -MP -MF .deps/BinaryRetriever.Tpo -c BinaryRetriever.cpp -fPIC -DPIC -o .libs/BinaryRetriever.o BinaryRetriever.cpp: In member function 'virtual void BinaryRetriever::getData(const string&, tree&)': BinaryRetriever.cpp:204:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if(start.size()!=rank || size.size()!=rank) ^ BinaryRetriever.cpp:204:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if(start.size()!=rank || size.size()!=rank) ^ BinaryRetriever.cpp:210:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( size_t i=0 ; i/dev/null 2>&1 mv -f .deps/BinaryRetriever.Tpo .deps/BinaryRetriever.Plo /bin/sh ../../../libtool --tag=CXX --mode=link g++ -g -O2 -fno-strict-aliasing -Wall -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libBinaryRetriever.la BinaryRetriever.lo -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: ar cru .libs/libBinaryRetriever.a .libs/BinaryRetriever.o libtool: link: ranlib .libs/libBinaryRetriever.a libtool: link: ( cd ".libs" && rm -f "libBinaryRetriever.la" && ln -s "../libBinaryRetriever.la" "libBinaryRetriever.la" ) make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/binary' Making all in spec make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/spec' /bin/sh ../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT SPEClib.lo -MD -MP -MF .deps/SPEClib.Tpo -c -o SPEClib.lo SPEClib.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT SPEClib.lo -MD -MP -MF .deps/SPEClib.Tpo -c SPEClib.cpp -fPIC -DPIC -o .libs/SPEClib.o SPEClib.cpp: In function 'int get_label_position(std::ifstream&, char*, int)': SPEClib.cpp:341:9: warning: unused variable 'position' [-Wunused-variable] int position; ^ SPEClib.cpp: In function 'bool get_date(std::ifstream&, char*)': SPEClib.cpp:90:15: warning: 'a' is used uninitialized in this function [-Wuninitialized] while(!(a =='#' && b =='L')){ ^ SPEClib.cpp:90:26: warning: 'b' is used uninitialized in this function [-Wuninitialized] while(!(a =='#' && b =='L')){ ^ SPEClib.cpp: In function 'bool get_userID(std::ifstream&, char*)': SPEClib.cpp:146:15: warning: 'a' is used uninitialized in this function [-Wuninitialized] while(!(a =='#' && b =='S')){ ^ SPEClib.cpp:146:26: warning: 'b' is used uninitialized in this function [-Wuninitialized] while(!(a =='#' && b =='S')){ ^ SPEClib.cpp: In function 'bool refill_mode(std::ifstream&, char*)': SPEClib.cpp:204:15: warning: 'a' is used uninitialized in this function [-Wuninitialized] while(!(a =='#' && b =='L')){ ^ SPEClib.cpp:204:26: warning: 'b' is used uninitialized in this function [-Wuninitialized] while(!(a =='#' && b =='L')){ ^ SPEClib.cpp: In function 'bool refill_time(std::ifstream&, char*)': SPEClib.cpp:276:15: warning: 'a' is used uninitialized in this function [-Wuninitialized] while(!(a =='#' && b =='L')){ ^ SPEClib.cpp:276:26: warning: 'b' is used uninitialized in this function [-Wuninitialized] while(!(a =='#' && b =='L')){ ^ SPEClib.cpp: In function 'int motor_counter(std::ifstream&)': SPEClib.cpp:787:15: warning: 'a' is used uninitialized in this function [-Wuninitialized] while(!(a =='#' && b =='L')){ ^ SPEClib.cpp:787:26: warning: 'b' is used uninitialized in this function [-Wuninitialized] while(!(a =='#' && b =='L')){ ^ SPEClib.cpp: In function 'int m_label_counter(std::ifstream&, int)': SPEClib.cpp:849:15: warning: 'a' is used uninitialized in this function [-Wuninitialized] while(!(a =='#' && b =='L')){ ^ SPEClib.cpp:849:26: warning: 'b' is used uninitialized in this function [-Wuninitialized] while(!(a =='#' && b =='L')){ ^ SPEClib.cpp: In function 'bool is_motor(std::ifstream&)': SPEClib.cpp:922:15: warning: 'a' is used uninitialized in this function [-Wuninitialized] while(!(a =='#' && b =='P')){ ^ SPEClib.cpp:922:26: warning: 'b' is used uninitialized in this function [-Wuninitialized] while(!(a =='#' && b =='P')){ ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT SPEClib.lo -MD -MP -MF .deps/SPEClib.Tpo -c SPEClib.cpp -o SPEClib.o >/dev/null 2>&1 mv -f .deps/SPEClib.Tpo .deps/SPEClib.Plo /bin/sh ../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT spec_retriever.lo -MD -MP -MF .deps/spec_retriever.Tpo -c -o spec_retriever.lo spec_retriever.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT spec_retriever.lo -MD -MP -MF .deps/spec_retriever.Tpo -c spec_retriever.cpp -fPIC -DPIC -o .libs/spec_retriever.o spec_retriever.cpp: In member function 'virtual void SpecRetriever::getData(const string&, tree&)': spec_retriever.cpp:254:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for(int a=0; a&)': spec_retriever.cpp:892:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for(int a=0; a/dev/null 2>&1 mv -f .deps/spec_retriever.Tpo .deps/spec_retriever.Plo /bin/sh ../../../libtool --tag=CXX --mode=link g++ -g -O2 -fno-strict-aliasing -Wall -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libSpec.la SPEClib.lo spec_retriever.lo -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: ar cru .libs/libSpec.a .libs/SPEClib.o .libs/spec_retriever.o libtool: link: ranlib .libs/libSpec.a libtool: link: ( cd ".libs" && rm -f "libSpec.la" && ln -s "../libSpec.la" "libSpec.la" ) make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/spec' Making all in esrf_edf make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/esrf_edf' /bin/sh ../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT edf_reader.lo -MD -MP -MF .deps/edf_reader.Tpo -c -o edf_reader.lo edf_reader.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT edf_reader.lo -MD -MP -MF .deps/edf_reader.Tpo -c edf_reader.cpp -fPIC -DPIC -o .libs/edf_reader.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT edf_reader.lo -MD -MP -MF .deps/edf_reader.Tpo -c edf_reader.cpp -o edf_reader.o >/dev/null 2>&1 mv -f .deps/edf_reader.Tpo .deps/edf_reader.Plo /bin/sh ../../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT edf_retriever.lo -MD -MP -MF .deps/edf_retriever.Tpo -c -o edf_retriever.lo edf_retriever.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT edf_retriever.lo -MD -MP -MF .deps/edf_retriever.Tpo -c edf_retriever.cpp -fPIC -DPIC -o .libs/edf_retriever.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../../include -I. -I../../../include -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT edf_retriever.lo -MD -MP -MF .deps/edf_retriever.Tpo -c edf_retriever.cpp -o edf_retriever.o >/dev/null 2>&1 mv -f .deps/edf_retriever.Tpo .deps/edf_retriever.Plo /bin/sh ../../../libtool --tag=CXX --mode=link g++ -g -O2 -fno-strict-aliasing -Wall -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libEdf.la edf_reader.lo edf_retriever.lo -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm libtool: link: ar cru .libs/libEdf.a .libs/edf_reader.o .libs/edf_retriever.o libtool: link: ranlib .libs/libEdf.a libtool: link: ( cd ".libs" && rm -f "libEdf.la" && ln -s "../libEdf.la" "libEdf.la" ) make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/esrf_edf' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate' g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -DFRM2_RETRIEVER -DTEXT_COLLIST_RETRIEVER -DTEXT_PLAIN_RETRIEVER -DTEXT_XML_RETRIEVER -DDYNAMIC_RETRIEVER -DSNS_HISTOGRAM_RETRIEVER -DLOOPY_RETRIEVER -DBINARY_RETRIEVER -DEDF_RETRIEVER -DSPEC_RETRIEVER `xml2-config --cflags` -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT attr.o -MD -MP -MF .deps/attr.Tpo -c -o attr.o attr.cpp mv -f .deps/attr.Tpo .deps/attr.Po g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -DFRM2_RETRIEVER -DTEXT_COLLIST_RETRIEVER -DTEXT_PLAIN_RETRIEVER -DTEXT_XML_RETRIEVER -DDYNAMIC_RETRIEVER -DSNS_HISTOGRAM_RETRIEVER -DLOOPY_RETRIEVER -DBINARY_RETRIEVER -DEDF_RETRIEVER -DSPEC_RETRIEVER `xml2-config --cflags` -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT main.o -MD -MP -MF .deps/main.Tpo -c -o main.o main.cpp mv -f .deps/main.Tpo .deps/main.Po g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -DFRM2_RETRIEVER -DTEXT_COLLIST_RETRIEVER -DTEXT_PLAIN_RETRIEVER -DTEXT_XML_RETRIEVER -DDYNAMIC_RETRIEVER -DSNS_HISTOGRAM_RETRIEVER -DLOOPY_RETRIEVER -DBINARY_RETRIEVER -DEDF_RETRIEVER -DSPEC_RETRIEVER `xml2-config --cflags` -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT nexus_retriever.o -MD -MP -MF .deps/nexus_retriever.Tpo -c -o nexus_retriever.o nexus_retriever.cpp mv -f .deps/nexus_retriever.Tpo .deps/nexus_retriever.Po g++ -DHAVE_CONFIG_H -I. -I../../include -I. -I../../include -DFRM2_RETRIEVER -DTEXT_COLLIST_RETRIEVER -DTEXT_PLAIN_RETRIEVER -DTEXT_XML_RETRIEVER -DDYNAMIC_RETRIEVER -DSNS_HISTOGRAM_RETRIEVER -DLOOPY_RETRIEVER -DBINARY_RETRIEVER -DEDF_RETRIEVER -DSPEC_RETRIEVER `xml2-config --cflags` -I/usr/include/hdf -DHDF4 -I/usr/include -DHDF5 -DH5_NO_DEPRECATED_SYMBOLS -DH5Acreate_vers=2 -DH5Aiterate_vers=2 -DH5Dcreate_vers=2 -DH5Dopen_vers=2 -DH5Eclear_vers=2 -DH5Eprint_vers=2 -DH5Epush_vers=2 -DH5Eset_auto_vers=2 -DH5Eget_auto_vers=2 -DH5Ewalk_vers=2 -DH5Gcreate_vers=2 -DH5Gopen_vers=2 -DH5Pget_filter_vers=2 -DH5Pget_filter_by_id_vers=2 -DH5Pinsert_vers=2 -DH5Pregister_vers=2 -DH5Rget_obj_type_vers=2 -DH5Tarray_create_vers=2 -DH5Tcommit_vers=2 -DH5Tget_array_dims_vers=2 -DH5Topen_vers=2 -I/usr/include -DNXXML -fno-common -DHAVE_NAPICONFIG_H -g -O2 -fno-strict-aliasing -Wall -MT nexus_util.o -MD -MP -MF .deps/nexus_util.Tpo -c -o nexus_util.o nexus_util.cpp nexus_util.cpp: In function 'void nexus_util::open(void**, const Node&)': nexus_util.cpp:94:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( size_t i=0 ; i /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib/python2.7/site-packages/nxs/napi.py if test -z "/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64"; then \ ../../config/py-compile --basedir "/usr/lib/python2.7/site-packages/nxs" napi.py; \ else \ ../../config/py-compile --destdir "/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64" --basedir "/usr/lib/python2.7/site-packages/nxs" napi.py; \ fi Byte-compiling python modules... napi.py Byte-compiling python modules (optimized versions) ... napi.py make[4]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/bindings/python' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/bindings/python' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/bindings/python' make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/bindings' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/bindings' make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/bindings' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/bindings' make[1]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/bindings' Making install in applications make[1]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications' Making install in NXbrowse make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXbrowse' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXbrowse' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' /bin/sh ../../libtool --mode=install /usr/bin/install -c nxbrowse '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' libtool: install: /usr/bin/install -c nxbrowse /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/nxbrowse /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/man/man1' /usr/bin/install -c -m 644 nxbrowse.1 '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/man/man1' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXbrowse' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXbrowse' Making install in NXdir make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXdir' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXdir' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' /bin/sh ../../libtool --mode=install /usr/bin/install -c nxdir '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' libtool: install: /usr/bin/install -c nxdir /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/nxdir /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/man/man1' /usr/bin/install -c -m 644 nxdir.1 '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/man/man1' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXdir' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXdir' Making install in NXtraverse make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtraverse' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtraverse' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' /bin/sh ../../libtool --mode=install /usr/bin/install -c nxtraverse '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' libtool: install: /usr/bin/install -c nxtraverse /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/nxtraverse make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtraverse' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtraverse' Making install in NXconvert make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXconvert' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXconvert' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64' /bin/sh ../../libtool --mode=install /usr/bin/install -c libnxconvert.la '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64' libtool: install: warning: relinking `libnxconvert.la' libtool: install: (cd /builddir/build/BUILD/nexus-4.3.3/applications/NXconvert; /bin/sh /builddir/build/BUILD/nexus-4.3.3/libtool --tag CXX --mode=relink g++ -g -O2 -fno-strict-aliasing -Wall -L../../bindings/cpp/.libs -L../../src/.libs -L/usr/lib64/hdf -lmfhdf -ldf -L/usr/lib64 -L/usr/lib -lhdf5 -lz -L/usr/lib -lmxml -version-info 5:0:5 -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -o libnxconvert.la -rpath /usr/lib64 nxconvert_common.lo ../../bindings/cpp/libNeXusCPP.la ../../src/libNeXus.la -lhdf5 -lmfhdf -ldf -ljpeg -lz -lpthread -ldl -lm -inst-prefix-dir /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64) libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.8.2/crtbeginS.o .libs/nxconvert_common.o -L/builddir/build/BUILD/nexus-4.3.3/src/.libs -L../../bindings/cpp/.libs -L../../src/.libs -L/usr/lib64/hdf -L/usr/lib64 -L/usr/lib -L/usr/local/lib -L/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64 -lNeXusCPP -lNeXus -lmxml -lhdf5 /usr/lib64/hdf/libmfhdf.a /usr/lib64/hdf/libdf.a -ljpeg -lz -lpthread -ldl -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-redhat-linux/4.8.2/crtendS.o /usr/lib/gcc/x86_64-redhat-linux/4.8.2/../../../../lib64/crtn.o -O2 -Wl,-soname -Wl,libnxconvert.so.0 -o .libs/libnxconvert.so.0.5.0 libtool: install: /usr/bin/install -c .libs/libnxconvert.so.0.5.0T /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64/libnxconvert.so.0.5.0 libtool: install: (cd /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64 && { ln -s -f libnxconvert.so.0.5.0 libnxconvert.so.0 || { rm -f libnxconvert.so.0 && ln -s libnxconvert.so.0.5.0 libnxconvert.so.0; }; }) libtool: install: (cd /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64 && { ln -s -f libnxconvert.so.0.5.0 libnxconvert.so || { rm -f libnxconvert.so && ln -s libnxconvert.so.0.5.0 libnxconvert.so; }; }) libtool: install: /usr/bin/install -c .libs/libnxconvert.lai /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64/libnxconvert.la libtool: install: /usr/bin/install -c .libs/libnxconvert.a /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64/libnxconvert.a libtool: install: chmod 644 /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64/libnxconvert.a libtool: install: ranlib /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64/libnxconvert.a libtool: install: warning: remember to run `libtool --finish /usr/lib64' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' /bin/sh ../../libtool --mode=install /usr/bin/install -c nxconvert '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' libtool: install: /usr/bin/install -c nxconvert /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/nxconvert /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/man/man1' /usr/bin/install -c -m 644 nxconvert.1 '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/man/man1' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXconvert' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXconvert' Making install in NXdump make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXdump' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXdump' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' /bin/sh ../../libtool --mode=install /usr/bin/install -c NXdump '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' libtool: install: warning: `../../bindings/f90/libNeXus90.la' has not been installed in `/usr/lib64' libtool: install: warning: `/builddir/build/BUILD/nexus-4.3.3/src/libNeXus.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -c .libs/NXdump /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/NXdump make[3]: Nothing to be done for `install-data-am'. make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXdump' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXdump' Making install in NXtranslate make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate' Making install in text_collist make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_collist' make[4]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_collist' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_collist' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_collist' Making install in text_plain make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_plain' make[4]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_plain' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_plain' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_plain' Making install in text_xml make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_xml' make[4]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_xml' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_xml' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/text_xml' Making install in sns_histogram make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/sns_histogram' make[4]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/sns_histogram' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/sns_histogram' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/sns_histogram' Making install in docs make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/docs' make[4]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/docs' make[4]: Nothing to be done for `install-exec-am'. make[4]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/docs' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/docs' Making install in FRM2 make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/FRM2' make[4]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/FRM2' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/FRM2' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/FRM2' Making install in loopy make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/loopy' make[4]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/loopy' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/loopy' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/loopy' Making install in binary make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/binary' make[4]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/binary' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/binary' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/binary' Making install in spec make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/spec' make[4]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/spec' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/spec' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/spec' Making install in esrf_edf make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/esrf_edf' make[4]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/esrf_edf' make[4]: Nothing to be done for `install-exec-am'. make[4]: Nothing to be done for `install-data-am'. make[4]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/esrf_edf' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate/esrf_edf' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate' make[4]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' /bin/sh ../../libtool --mode=install /usr/bin/install -c nxtranslate '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' libtool: install: /usr/bin/install -c nxtranslate /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/nxtranslate /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/man/man1' /usr/bin/install -c -m 644 nxtranslate.1 '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/man/man1' make[4]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXtranslate' Making install in NXsummary make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXsummary' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXsummary' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' /bin/sh ../../libtool --mode=install /usr/bin/install -c nxsummary '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' libtool: install: /usr/bin/install -c nxsummary /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/nxsummary /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/man/man1' /usr/bin/install -c -m 644 nxsummary.1 '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/man/man1' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXsummary' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/NXsummary' Making install in nxingest make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/nxingest' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications/nxingest' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' /bin/sh ../../libtool --mode=install /usr/bin/install -c nxingest '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' libtool: install: /usr/bin/install -c nxingest /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/nxingest /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc/nxingest' /usr/bin/install -c -m 644 nxingest.txt gpl.txt '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc/nxingest' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/nxingest' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications/nxingest' make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/applications' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' /usr/bin/install -c nxdiff '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/man/man1' /usr/bin/install -c -m 644 nxdiff.1 '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/man/man1' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications' make[1]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/applications' Making install in test make[1]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/test' make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/test' make[2]: Nothing to be done for `install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/examples' /usr/bin/install -c -m 644 napi_test.c napif4_test.f napif5_test.f napif_test.f NXtest.f90 napi_test_cpp.cxx '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/examples' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/test' make[1]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/test' Making install in scripts make[1]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/scripts' make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/scripts' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' /usr/bin/install -c nxbuild nexus-config '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64/pkgconfig' /usr/bin/install -c -m 644 nexus.pc nexus-cpp.pc '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64/pkgconfig' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/scripts' make[1]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/scripts' Making install in examples make[1]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/examples' make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/examples' make[2]: Nothing to be done for `install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/examples' /usr/bin/install -c -m 644 README.examples '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/examples' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/examples' make[1]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/examples' Making install in doc make[1]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/doc' Making install in api make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/doc/api' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/doc/api' make[3]: Nothing to be done for `install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc/api' /usr/bin/install -c -m 644 napi.tex '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc/api' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/doc/api' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/doc/api' Making install in nxdict make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/doc/nxdict' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/doc/nxdict' make[3]: Nothing to be done for `install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc/nxdict' /usr/bin/install -c -m 644 NXdict.tex '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc/nxdict' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/doc/nxdict' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/doc/nxdict' Making install in tech_ref make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/doc/tech_ref' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/doc/tech_ref' make[3]: Nothing to be done for `install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc/tech_ref' /usr/bin/install -c -m 644 NeXus_definitions.pdf NeXus_definitions.txt '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc/tech_ref' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/doc/tech_ref' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/doc/tech_ref' Making install in doxygen make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/doc/doxygen' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/doc/doxygen' make[3]: Nothing to be done for `install-exec-am'. /bin/sh /builddir/build/BUILD/nexus-4.3.3/config/install-sh -d /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc/doxygen if test -f ./refman.pdf; then \ cp ./refman.pdf /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc/doxygen; \ fi if test -d ./html-c; then \ for i in ./html-*; do \ cp -r $i /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc/doxygen; \ done; \ find /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc/doxygen -type f -exec chmod 0644 {} \; ;\ find /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc/doxygen -type d -exec chmod 0755 {} \; ;\ fi make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/doc/doxygen' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/doc/doxygen' make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/doc' make[3]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/doc' make[3]: Nothing to be done for `install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc' /usr/bin/install -c -m 644 README.doc '/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/nexus/doc' make[3]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/doc' make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/doc' make[1]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/doc' Making install in macosx_install_kit make[1]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/macosx_install_kit' make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3/macosx_install_kit' make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/macosx_install_kit' make[1]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3/macosx_install_kit' make[1]: Entering directory `/builddir/build/BUILD/nexus-4.3.3' make[2]: Entering directory `/builddir/build/BUILD/nexus-4.3.3' make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. make[2]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3' make[1]: Leaving directory `/builddir/build/BUILD/nexus-4.3.3' + find /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64 -name '*.la' -exec rm -f '{}' ';' + /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 /builddir/build/BUILD/nexus-4.3.3 extracting debug info from /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/nxtranslate extracting debug info from /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/nxbrowse extracting debug info from /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/nxtraverse extracting debug info from /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/nxconvert extracting debug info from /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/nxdir extracting debug info from /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/nxingest extracting debug info from /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/NXdump extracting debug info from /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/bin/nxsummary extracting debug info from /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64/libnxconvert.so.0.5.0 extracting debug info from /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64/libjnexus.so.0.5.0 extracting debug info from /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64/libNeXusCPP.so.0.5.0 extracting debug info from /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64/libNeXus.so.0.5.0 extracting debug info from /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64/libNeXus90.so.0.0.0 extracting debug info from /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib64/libNeXus77.so.0.5.0 /usr/lib/rpm/sepdebugcrcfix: Updated 14 CRC32s, 0 CRC32s did match. symlinked /usr/lib/debug/usr/lib64/libjnexus.so.0.5.0.debug to /usr/lib/debug/usr/lib64/libjnexus.so.0.debug symlinked /usr/lib/debug/usr/lib64/libNeXus90.so.0.0.0.debug to /usr/lib/debug/usr/lib64/libNeXus90.so.debug symlinked /usr/lib/debug/usr/lib64/libNeXus.so.0.5.0.debug to /usr/lib/debug/usr/lib64/libNeXus.so.debug symlinked /usr/lib/debug/usr/lib64/libNeXusCPP.so.0.5.0.debug to /usr/lib/debug/usr/lib64/libNeXusCPP.so.0.debug symlinked /usr/lib/debug/usr/lib64/libNeXus.so.0.5.0.debug to /usr/lib/debug/usr/lib64/libNeXus.so.0.debug symlinked /usr/lib/debug/usr/lib64/libjnexus.so.0.5.0.debug to /usr/lib/debug/usr/lib64/libjnexus.so.debug symlinked /usr/lib/debug/usr/lib64/libNeXusCPP.so.0.5.0.debug to /usr/lib/debug/usr/lib64/libNeXusCPP.so.debug symlinked /usr/lib/debug/usr/lib64/libNeXus90.so.0.0.0.debug to /usr/lib/debug/usr/lib64/libNeXus90.so.0.debug symlinked /usr/lib/debug/usr/lib64/libnxconvert.so.0.5.0.debug to /usr/lib/debug/usr/lib64/libnxconvert.so.debug symlinked /usr/lib/debug/usr/lib64/libNeXus77.so.0.5.0.debug to /usr/lib/debug/usr/lib64/libNeXus77.so.0.debug symlinked /usr/lib/debug/usr/lib64/libNeXus77.so.0.5.0.debug to /usr/lib/debug/usr/lib64/libNeXus77.so.debug symlinked /usr/lib/debug/usr/lib64/libnxconvert.so.0.5.0.debug to /usr/lib/debug/usr/lib64/libnxconvert.so.0.debug 3010 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-compress + /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 Bytecompiling .py files below /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/lib/python2.7/ using /usr/bin/python2.7 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/lib/rpm/redhat/brp-java-repack-jars Processing files: nexus-4.3.3-1.el7.centos.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.PekioY + umask 022 + cd /builddir/build/BUILD + cd nexus-4.3.3 + DOCDIR=/builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/doc/nexus-4.3.3 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/doc/nexus-4.3.3 + cp -pr README /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/doc/nexus-4.3.3 + cp -pr NEWS /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/doc/nexus-4.3.3 + cp -pr ChangeLog /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/doc/nexus-4.3.3 + cp -pr AUTHORS /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/doc/nexus-4.3.3 + cp -pr COPYING /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/doc/nexus-4.3.3 + cp -pr INSTALL /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64/usr/share/doc/nexus-4.3.3 + exit 0 Provides: libNeXus.so.0()(64bit) libNeXus77.so.0()(64bit) libNeXus90.so.0()(64bit) libNeXusCPP.so.0()(64bit) libnxconvert.so.0()(64bit) nexus = 4.3.3-1.el7.centos nexus(x86-64) = 4.3.3-1.el7.centos Requires(interp): /bin/sh /bin/sh Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires(post): /bin/sh Requires(postun): /bin/sh Requires: libNeXus.so.0()(64bit) libNeXus77.so.0()(64bit) libNeXus90.so.0()(64bit) libNeXusCPP.so.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgfortran.so.3()(64bit) libgfortran.so.3(GFORTRAN_1.0)(64bit) libgfortran.so.3(GFORTRAN_1.4)(64bit) libhdf5.so.8()(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) libm.so.6()(64bit) libmxml.so.1()(64bit) libnxconvert.so.0()(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libquadmath.so.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: nexus-devel-4.3.3-1.el7.centos.x86_64 Provides: nexus-devel = 4.3.3-1.el7.centos nexus-devel(x86-64) = 4.3.3-1.el7.centos pkgconfig(nexus) = 4.3.3--1 pkgconfig(nexus-cpp) = 4.3.3--1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config Processing files: nexus-tools-4.3.3-1.el7.centos.x86_64 Provides: nexus-tools = 4.3.3-1.el7.centos nexus-tools(x86-64) = 4.3.3-1.el7.centos Requires(interp): /bin/sh Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires(post): /bin/sh Requires: /bin/sh /usr/bin/env libNeXus.so.0()(64bit) libNeXus90.so.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libdl.so.2()(64bit) libdl.so.2(GLIBC_2.2.5)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgfortran.so.3()(64bit) libgfortran.so.3(GFORTRAN_1.0)(64bit) libgfortran.so.3(GFORTRAN_1.4)(64bit) libhdf5.so.8()(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libmxml.so.1()(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libquadmath.so.0()(64bit) libreadline.so.6()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libtinfo.so.5()(64bit) libxml2.so.2()(64bit) libxml2.so.2(LIBXML2_2.4.30)(64bit) libxml2.so.2(LIBXML2_2.6.0)(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: nexus-doc-4.3.3-1.el7.centos.x86_64 Provides: nexus-doc = 4.3.3-1.el7.centos nexus-doc(x86-64) = 4.3.3-1.el7.centos Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: nexus-python-4.3.3-1.el7.centos.x86_64 Provides: nexus-python = 4.3.3-1.el7.centos nexus-python(x86-64) = 4.3.3-1.el7.centos Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 2.7 Processing files: nexus-java-4.3.3-1.el7.centos.x86_64 Provides: libjnexus.so.0()(64bit) nexus-java = 4.3.3-1.el7.centos nexus-java(x86-64) = 4.3.3-1.el7.centos Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libNeXus.so.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libdl.so.2()(64bit) libhdf5.so.8()(64bit) libjnexus.so.0()(64bit) libjpeg.so.62()(64bit) libm.so.6()(64bit) libmxml.so.1()(64bit) libpthread.so.0()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: nexus-debuginfo-4.3.3-1.el7.centos.x86_64 Provides: nexus-debuginfo = 4.3.3-1.el7.centos nexus-debuginfo(x86-64) = 4.3.3-1.el7.centos Requires(rpmlib): rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64 Wrote: /builddir/build/RPMS/nexus-4.3.3-1.el7.centos.x86_64.rpm Wrote: /builddir/build/RPMS/nexus-devel-4.3.3-1.el7.centos.x86_64.rpm Wrote: /builddir/build/RPMS/nexus-tools-4.3.3-1.el7.centos.x86_64.rpm Wrote: /builddir/build/RPMS/nexus-doc-4.3.3-1.el7.centos.x86_64.rpm Wrote: /builddir/build/RPMS/nexus-python-4.3.3-1.el7.centos.x86_64.rpm Wrote: /builddir/build/RPMS/nexus-java-4.3.3-1.el7.centos.x86_64.rpm Wrote: /builddir/build/RPMS/nexus-debuginfo-4.3.3-1.el7.centos.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.xrL1k4 + umask 022 + cd /builddir/build/BUILD + cd nexus-4.3.3 + test /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64 '!=' / + rm -fr /builddir/build/BUILDROOT/nexus-4.3.3-1.el7.centos.x86_64 + exit 0 Child return code was: 0 LEAVE do -->