Warning: Permanently added '35.171.157.252' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8220424-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64 Version: 1.1 PID: 14519 Logging PID: 14520 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8220424, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '71d6d3dc504de937450247061bf6af06a8ad03c7', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/thrnciar/python-pip-24.3.1/python-pynwb', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'python-pynwb', 'package_version': '2.7.0-4', 'project_dirname': 'python-pip-24.3.1', 'project_name': 'python-pip-24.3.1', 'project_owner': 'thrnciar', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/thrnciar/python-pip-24.3.1/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'thrnciar/python-pip-24.3.1--thrnciar', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 0, 'submitter': 'thrnciar', 'tags': [], 'task_id': '8220424-fedora-rawhide-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/thrnciar/python-pip-24.3.1/python-pynwb /var/lib/copr-rpmbuild/workspace/workdir-ujywb8vh/python-pynwb --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/thrnciar/python-pip-24.3.1/python-pynwb', '/var/lib/copr-rpmbuild/workspace/workdir-ujywb8vh/python-pynwb', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-ujywb8vh/python-pynwb'... Running: git checkout 71d6d3dc504de937450247061bf6af06a8ad03c7 -- cmd: ['git', 'checkout', '71d6d3dc504de937450247061bf6af06a8ad03c7', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-ujywb8vh/python-pynwb rc: 0 stdout: stderr: Note: switching to '71d6d3dc504de937450247061bf6af06a8ad03c7'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 71d6d3d automatic import of python-pynwb Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-ujywb8vh/python-pynwb rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading pynwb-2.7.0.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o pynwb-2.7.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/thrnciar/python-pip-24.3.1/python-pynwb/pynwb-2.7.0.tar.gz/md5/9f1ea4e4a17fa0d0935828217814549d/pynwb-2.7.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 33.1M 100 33.1M 0 0 442M 0 --:--:-- --:--:-- --:--:-- 448M INFO: Reading stdout from command: md5sum pynwb-2.7.0.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-ujywb8vh/python-pynwb/python-pynwb.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-ujywb8vh/python-pynwb --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1730891782.604074 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.12.1, NVR = mock-5.9-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-ujywb8vh/python-pynwb/python-pynwb.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-ujywb8vh/python-pynwb --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1730891782.604074 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-ujywb8vh/python-pynwb/python-pynwb.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1730891782.604074/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1730891782.604074/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/9df49db1da9a4d9e5cc4a79ed2fbf8d5788f27e41b827b871d471669cff1a558/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/9df49db1da9a4d9e5cc4a79ed2fbf8d5788f27e41b827b871d471669cff1a558/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1730891782.604074/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.6.2-1.fc42.x86_64 dnf5-plugins-5.2.6.2-1.fc42.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 502.4 KiB/s | 27.6 KiB | 00m00s Copr repository 100% | 90.1 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 159.5 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 55.6 MiB/s | 1.2 MiB | 00m00s Repositories loaded. 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB debugedit x86_64 5.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.7 KiB dwz x86_64 0.15-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 299.2 KiB ed x86_64 1.20.2-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 146.9 KiB efi-srpm-macros noarch 5-12.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.1 KiB elfutils x86_64 0.192-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.7 MiB elfutils-debuginfod-client x86_64 0.192-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 76.0 KiB elfutils-default-yama-scope noarch 0.192-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 KiB elfutils-libelf x86_64 0.192-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB elfutils-libs x86_64 0.192-3.fc42 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 145.5 KiB mpfr x86_64 4.2.1-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 832.1 KiB ncurses-base noarch 6.5-2.20240629.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 326.3 KiB ncurses-libs x86_64 6.5-2.20240629.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 975.2 KiB ocaml-srpm-macros noarch 10-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.0 B openldap x86_64 2.6.8-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 644.2 KiB openssl-libs x86_64 1:3.2.2-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.8 MiB p11-kit x86_64 0.25.5-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB p11-kit-trust x86_64 0.25.5-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 403.8 KiB package-notes-srpm-macros noarch 0.5-12.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 KiB pam x86_64 1.7.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB pam-libs x86_64 1.7.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 127.7 KiB pcre2 x86_64 10.44-1.fc41.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 653.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 251.6 KiB perl-srpm-macros noarch 1-56.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.0 B pkgconf x86_64 2.3.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.6 KiB pkgconf-m4 noarch 2.3.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 989.0 B popt x86_64 1.19-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 136.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.5 KiB pyproject-srpm-macros noarch 1.15.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.0 B qt6-srpm-macros noarch 6.8.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.0 B readline x86_64 8.2-11.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 493.1 KiB rpm x86_64 4.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.1 MiB rpm-build-libs x86_64 4.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 206.7 KiB rpm-libs x86_64 4.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 726.1 KiB rpm-sequoia x86_64 1.7.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB rust-srpm-macros noarch 26.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.15.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.7 KiB sqlite-libs x86_64 3.46.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB systemd-libs x86_64 256.7-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 MiB util-linux-core x86_64 2.40.2-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB xxhash-libs x86_64 0.8.2-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 88.4 KiB xz-libs x86_64 1:5.6.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 218.4 KiB zig-srpm-macros noarch 1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip x86_64 3.0-41.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 703.2 KiB zlib-ng-compat x86_64 2.2.2-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 134.0 KiB zstd x86_64 1.5.6-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 154 packages Total size of inbound packages is 53 MiB. Need to download 0 B. After this operation, 180 MiB extra will be used (install 180 MiB, remove 0 B). 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redhat-rpm-config- 100% | 188.7 MiB/s | 193.2 KiB | 00m00s [151/156] Installing rpm-build-0:4.20.0 100% | 99.1 MiB/s | 202.9 KiB | 00m00s [152/156] Installing pyproject-srpm-mac 100% | 2.4 MiB/s | 2.5 KiB | 00m00s [153/156] Installing util-linux-0:2.40. 100% | 218.5 MiB/s | 3.7 MiB | 00m00s [154/156] Installing authselect-0:1.5.0 100% | 158.1 MiB/s | 161.9 KiB | 00m00s [155/156] Installing which-0:2.21-42.fc 100% | 80.5 MiB/s | 82.4 KiB | 00m00s [156/156] Installing info-0:7.1.1-2.fc4 100% | 252.6 KiB/s | 362.2 KiB | 00m01s Warning: skipped PGP checks for 154 packages from repository: http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.4.3-1.fc42.x86_64 alternatives-1.30-1.fc41.x86_64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.x86_64 authselect-1.5.0-8.fc42.x86_64 authselect-libs-1.5.0-8.fc42.x86_64 basesystem-11-21.fc41.noarch bash-5.2.32-2.fc42.x86_64 binutils-2.43.50-5.fc42.x86_64 build-reproducibility-srpm-macros-0.4.3-1.fc42.noarch bzip2-1.0.8-19.fc41.x86_64 bzip2-libs-1.0.8-19.fc41.x86_64 ca-certificates-2024.2.69_v8.0.401-2.fc42.noarch coreutils-9.5-10.fc42.x86_64 coreutils-common-9.5-10.fc42.x86_64 cpio-2.15-2.fc41.x86_64 cracklib-2.9.11-6.fc41.x86_64 crypto-policies-20241104-1.git4983c10.fc42.noarch curl-8.10.1-2.fc42.x86_64 cyrus-sasl-lib-2.1.28-27.fc41.x86_64 debugedit-5.1-1.fc42.x86_64 diffutils-3.10-8.fc41.x86_64 dwz-0.15-8.fc42.x86_64 ed-1.20.2-2.fc41.x86_64 efi-srpm-macros-5-12.fc41.noarch elfutils-0.192-3.fc42.x86_64 elfutils-debuginfod-client-0.192-3.fc42.x86_64 elfutils-default-yama-scope-0.192-3.fc42.noarch elfutils-libelf-0.192-3.fc42.x86_64 elfutils-libs-0.192-3.fc42.x86_64 fedora-gpg-keys-42-0.3.noarch fedora-release-42-0.8.noarch fedora-release-common-42-0.8.noarch fedora-release-identity-basic-42-0.8.noarch fedora-repos-42-0.3.noarch fedora-repos-rawhide-42-0.3.noarch file-5.45-7.fc41.x86_64 file-libs-5.45-7.fc41.x86_64 filesystem-3.18-29.fc42.x86_64 findutils-4.10.0-4.fc41.x86_64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc42.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.x86_64 gdb-minimal-15.2-1.fc42.x86_64 gdbm-1.23-7.fc41.x86_64 gdbm-libs-1.23-7.fc41.x86_64 ghc-srpm-macros-1.9.2-1.fc42.noarch glibc-2.40.9000-16.fc42.x86_64 glibc-common-2.40.9000-16.fc42.x86_64 glibc-gconv-extra-2.40.9000-16.fc42.x86_64 glibc-minimal-langpack-2.40.9000-16.fc42.x86_64 gmp-6.3.0-2.fc41.x86_64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch grep-3.11-9.fc41.x86_64 gzip-1.13-2.fc41.x86_64 info-7.1.1-2.fc42.x86_64 jansson-2.14-1.fc42.x86_64 json-c-0.17-4.fc41.x86_64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.x86_64 krb5-libs-1.21.3-3.fc42.x86_64 libacl-2.3.2-2.fc41.x86_64 libarchive-3.7.6-1.fc42.x86_64 libattr-2.5.2-4.fc41.x86_64 libblkid-2.40.2-8.fc42.x86_64 libbrotli-1.1.0-5.fc41.x86_64 libcap-2.71-1.fc42.x86_64 libcap-ng-0.8.5-3.fc41.x86_64 libcom_err-1.47.1-6.fc42.x86_64 libcurl-8.10.1-2.fc42.x86_64 libeconf-0.7.4-2.fc42.x86_64 libevent-2.1.12-14.fc41.x86_64 libfdisk-2.40.2-8.fc42.x86_64 libffi-3.4.6-3.fc42.x86_64 libgcc-14.2.1-5.fc42.x86_64 libgomp-14.2.1-5.fc42.x86_64 libidn2-2.3.7-2.fc41.x86_64 libmount-2.40.2-8.fc42.x86_64 libnghttp2-1.64.0-1.fc42.x86_64 libnsl2-2.0.1-2.fc41.x86_64 libpkgconf-2.3.0-1.fc42.x86_64 libpsl-0.21.5-4.fc41.x86_64 libpwquality-1.4.5-11.fc41.x86_64 libselinux-3.7-6.fc42.x86_64 libsemanage-3.7-3.fc42.x86_64 libsepol-3.7-3.fc42.x86_64 libsmartcols-2.40.2-8.fc42.x86_64 libssh-0.11.1-1.fc42.x86_64 libssh-config-0.11.1-1.fc42.noarch libstdc++-14.2.1-5.fc42.x86_64 libtasn1-4.19.0-9.fc41.x86_64 libtirpc-1.3.6-0.fc42.x86_64 libtool-ltdl-2.4.7-12.fc41.x86_64 libunistring-1.1-8.fc41.x86_64 libuuid-2.40.2-8.fc42.x86_64 libverto-0.3.2-9.fc41.x86_64 libxcrypt-4.4.36-8.fc42.x86_64 libxml2-2.12.8-2.fc41.x86_64 libzstd-1.5.6-2.fc41.x86_64 lua-libs-5.4.7-1.fc42.x86_64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.x86_64 mpfr-4.2.1-5.fc41.x86_64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.x86_64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.x86_64 openssl-libs-3.2.2-8.fc42.x86_64 p11-kit-0.25.5-4.fc42.x86_64 p11-kit-trust-0.25.5-4.fc42.x86_64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.7.0-1.fc42.x86_64 pam-libs-1.7.0-1.fc42.x86_64 patch-2.7.6-25.fc41.x86_64 pcre2-10.44-1.fc41.1.x86_64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.x86_64 pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.x86_64 popt-1.19-7.fc41.x86_64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.15.1-1.fc42.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.8.0-1.fc42.noarch readline-8.2-11.fc42.x86_64 redhat-rpm-config-296-1.fc42.noarch rpm-4.20.0-1.fc42.x86_64 rpm-build-4.20.0-1.fc42.x86_64 rpm-build-libs-4.20.0-1.fc42.x86_64 rpm-libs-4.20.0-1.fc42.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.x86_64 setup-2.15.0-5.fc41.noarch shadow-utils-4.16.0-6.fc42.x86_64 sqlite-libs-3.46.1-1.fc42.x86_64 systemd-libs-256.7-1.fc42.x86_64 tar-1.35-4.fc41.x86_64 unzip-6.0-64.fc41.x86_64 util-linux-2.40.2-8.fc42.x86_64 util-linux-core-2.40.2-8.fc42.x86_64 which-2.21-42.fc41.x86_64 xxhash-libs-0.8.2-4.fc42.x86_64 xz-5.6.3-2.fc42.x86_64 xz-libs-5.6.3-2.fc42.x86_64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.x86_64 zlib-ng-compat-2.2.2-1.fc42.x86_64 zstd-1.5.6-2.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1721347200 Wrote: /builddir/build/SRPMS/python-pynwb-2.7.0-4.fc42.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1730891782.604074/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-ujywb8vh/python-pynwb/python-pynwb.spec) Config(child) 0 minutes 11 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/python-pynwb-2.7.0-4.fc42.src.rpm) Config(fedora-rawhide-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1730891782.604074/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1730891782.604074/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1730891782.604074/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.6.2-1.fc42.x86_64 dnf5-plugins-5.2.6.2-1.fc42.x86_64 Finish: chroot init Start: build phase for python-pynwb-2.7.0-4.fc42.src.rpm Start: build setup for python-pynwb-2.7.0-4.fc42.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1721347200 Wrote: /builddir/build/SRPMS/python-pynwb-2.7.0-4.fc42.src.rpm Updating and loading repositories: fedora 100% | 268.3 KiB/s | 27.6 KiB | 00m00s Copr repository 100% | 73.0 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 67.2 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 39.0 MiB/s | 1.2 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: python3-devel x86_64 3.13.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB python3-matplotlib x86_64 3.9.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21.1 MiB python3-pytest noarch 8.3.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20.8 MiB Installing dependencies: abattis-cantarell-vf-fonts noarch 0.301-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.7 KiB cairo x86_64 1.18.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB default-fonts-core-sans noarch 4.2-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.9 KiB dejavu-sans-fonts noarch 2.37-24.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.5 MiB expat x86_64 2.6.3-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 291.5 KiB flexiblas x86_64 3.4.4-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 48.5 KiB flexiblas-netlib x86_64 3.4.4-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10.7 MiB flexiblas-openblas-openmp x86_64 3.4.4-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43.3 KiB fontconfig x86_64 2.15.0-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 791.9 KiB fonts-filesystem noarch 1:2.0.5-17.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B freetype x86_64 2.13.3-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 850.5 KiB fribidi x86_64 1.0.16-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 194.5 KiB glib2 x86_64 2.82.2-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.7 MiB gnutls x86_64 3.8.8-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.2 MiB google-noto-fonts-common noarch 20240901-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 17.5 KiB google-noto-sans-vf-fonts noarch 20240901-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB graphite2 x86_64 1.3.14-16.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.0 KiB harfbuzz x86_64 10.0.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.7 MiB jbigkit-libs x86_64 2.1-30.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 117.6 KiB lcms2 x86_64 2.16-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 424.9 KiB libX11 x86_64 1.8.10-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 MiB libX11-common noarch 1.8.10-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 MiB libXau x86_64 1.0.11-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 66.9 KiB libXext x86_64 1.3.6-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 90.1 KiB libXft x86_64 2.3.8-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 164.5 KiB libXrender x86_64 0.9.11-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 50.1 KiB libb2 x86_64 0.98.1-12.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 42.2 KiB libgfortran x86_64 14.2.1-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.0 MiB libimagequant x86_64 4.0.3-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 666.7 KiB libjpeg-turbo x86_64 3.0.4-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 789.1 KiB liblerc x86_64 4.0.0-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 607.5 KiB libpng x86_64 2:1.6.44-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 245.8 KiB libqhull_r x86_64 1:8.0.2-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 483.4 KiB libquadmath x86_64 14.2.1-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 325.9 KiB libraqm x86_64 0.10.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 32.7 KiB libtiff x86_64 4.6.0-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 606.0 KiB libwebp x86_64 1.4.0-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 822.6 KiB libxcb x86_64 1.17.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB mpdecimal x86_64 2.5.1-16.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 204.9 KiB nettle x86_64 3.10-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 793.0 KiB openblas x86_64 0.3.26-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 96.0 KiB openblas-openmp x86_64 0.3.26-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39.4 MiB openjpeg x86_64 2.5.2-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 445.7 KiB pixman x86_64 0.43.4-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 718.1 KiB pyproject-rpm-macros noarch 1.15.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 109.2 KiB python-pip-wheel noarch 24.3.1-1.fc42 copr_base 1.2 MiB python-rpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22.1 KiB python3 x86_64 3.13.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 31.8 KiB python3-cairo x86_64 1.25.1-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 492.5 KiB python3-contourpy x86_64 1.3.0-2.fc42 copr_base 803.9 KiB python3-cycler noarch 0.11.0-14.fc42 copr_base 37.2 KiB python3-dateutil noarch 1:2.8.2-16.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 879.2 KiB python3-fonttools x86_64 4.54.1-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 18.0 MiB python3-iniconfig noarch 1.1.1-24.fc42 copr_base 20.6 KiB python3-kiwisolver x86_64 1.4.7-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 153.9 KiB python3-libs x86_64 3.13.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40.4 MiB python3-matplotlib-data noarch 3.9.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 741.5 KiB python3-matplotlib-data-fonts noarch 3.9.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.9 MiB python3-matplotlib-tk x86_64 3.9.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 262.7 KiB python3-numpy x86_64 1:1.26.4-8.fc42 copr_base 43.4 MiB python3-olefile noarch 0.47-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 340.4 KiB python3-packaging noarch 24.1-2.fc42 copr_base 420.3 KiB python3-pillow x86_64 11.0.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.9 MiB python3-pillow-tk x86_64 11.0.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 73.0 KiB python3-pluggy noarch 1.5.0-1.fc42 copr_base 192.7 KiB python3-pyparsing noarch 3.1.2-7.fc42 copr_base 996.2 KiB python3-rpm-generators noarch 14-11.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81.7 KiB python3-rpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.4 KiB python3-six noarch 1.16.0-23.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 118.3 KiB python3-tkinter x86_64 3.13.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 MiB tcl x86_64 1:8.6.15-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.2 MiB tk x86_64 1:8.6.15-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.6 MiB tzdata noarch 2024a-9.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB xml-common noarch 0.6.3-65.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 78.4 KiB Transaction Summary: Installing: 77 packages Total size of inbound packages is 58 MiB. Need to download 47 MiB. After this operation, 272 MiB extra will be used (install 272 MiB, remove 0 B). [1/1] python3-devel-0:3.13.0-1.fc42.x86 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/4] python3-0:3.13.0-1.fc42.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [2/6] python3-packaging-0:24.1-2.fc42.n 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 3/22] python3-libs-0:3.13.0-1.fc42.x8 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 4/24] tzdata-0:2024a-9.fc41.noarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 5/47] expat-0:2.6.3-1.fc42.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 6/48] libb2-0:0.98.1-12.fc41.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 7/49] mpdecimal-0:2.5.1-16.fc41.x86_6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 8/50] python-pip-wheel-0:24.3.1-1.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 9/74] 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| 00m00s [72/79] Installing pixman-0:0.43.4-2.fc 100% | 351.2 MiB/s | 719.2 KiB | 00m00s [73/79] Installing cairo-0:1.18.0-4.fc4 100% | 435.9 MiB/s | 1.7 MiB | 00m00s [74/79] Installing python3-cairo-0:1.25 100% | 242.5 MiB/s | 496.6 KiB | 00m00s [75/79] Installing libqhull_r-1:8.0.2-5 100% | 472.9 MiB/s | 484.2 KiB | 00m00s [76/79] Installing python3-matplotlib-t 100% | 86.4 MiB/s | 265.3 KiB | 00m00s [77/79] Installing python3-matplotlib-0 100% | 402.5 MiB/s | 21.3 MiB | 00m00s [78/79] Installing python3-pytest-0:8.3 100% | 523.9 MiB/s | 21.0 MiB | 00m00s [79/79] Installing python3-devel-0:3.13 100% | 23.6 MiB/s | 1.8 MiB | 00m00s Warning: skipped PGP checks for 77 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: build setup for python-pynwb-2.7.0-4.fc42.src.rpm Start: rpmbuild python-pynwb-2.7.0-4.fc42.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.SzyWa2 + umask 022 + cd /builddir/build/BUILD/python-pynwb-2.7.0-build + test -d /builddir/build/BUILD/python-pynwb-2.7.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-pynwb-2.7.0-build + /usr/bin/rm -rf /builddir/build/BUILD/python-pynwb-2.7.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-pynwb-2.7.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-pynwb-2.7.0-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.CBVZjV + umask 022 + cd /builddir/build/BUILD/python-pynwb-2.7.0-build + cd /builddir/build/BUILD/python-pynwb-2.7.0-build + rm -rf pynwb-2.7.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/pynwb-2.7.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd pynwb-2.7.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/1902.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + sed -r -i 's@"coverage", "run", "-p"@"/usr/bin/python3"@' tests/validation/test_validate.py + sed -r -i 's/==.*//' requirements.txt + tee requirements-unpinned.txt + sed -r -i '1{s/^/from unittest import skip\n/}' tests/validation/test_validate.py + for n in test_validate_file_cached test_validate_file_cached_extension test_validate_file_cached_extension_pass_ns test_validate_file_cached_ignore test_validate_file_list_namespaces_core test_validate_file_list_namespaces_extension + sed -r -i 's/^([[:blank:]]*)(def test_validate_file_cached\()/\1@skip('\''Re-import issues'\'')\n\1\2/' tests/validation/test_validate.py + for n in test_validate_file_cached test_validate_file_cached_extension test_validate_file_cached_extension_pass_ns test_validate_file_cached_ignore test_validate_file_list_namespaces_core test_validate_file_list_namespaces_extension + sed -r -i 's/^([[:blank:]]*)(def test_validate_file_cached_extension\()/\1@skip('\''Re-import issues'\'')\n\1\2/' tests/validation/test_validate.py + for n in test_validate_file_cached test_validate_file_cached_extension test_validate_file_cached_extension_pass_ns test_validate_file_cached_ignore test_validate_file_list_namespaces_core test_validate_file_list_namespaces_extension + sed -r -i 's/^([[:blank:]]*)(def test_validate_file_cached_extension_pass_ns\()/\1@skip('\''Re-import issues'\'')\n\1\2/' tests/validation/test_validate.py + for n in test_validate_file_cached test_validate_file_cached_extension test_validate_file_cached_extension_pass_ns test_validate_file_cached_ignore test_validate_file_list_namespaces_core test_validate_file_list_namespaces_extension + sed -r -i 's/^([[:blank:]]*)(def test_validate_file_cached_ignore\()/\1@skip('\''Re-import issues'\'')\n\1\2/' tests/validation/test_validate.py + for n in test_validate_file_cached test_validate_file_cached_extension test_validate_file_cached_extension_pass_ns test_validate_file_cached_ignore test_validate_file_list_namespaces_core test_validate_file_list_namespaces_extension + sed -r -i 's/^([[:blank:]]*)(def test_validate_file_list_namespaces_core\()/\1@skip('\''Re-import issues'\'')\n\1\2/' tests/validation/test_validate.py + for n in test_validate_file_cached test_validate_file_cached_extension test_validate_file_cached_extension_pass_ns test_validate_file_cached_ignore test_validate_file_list_namespaces_core test_validate_file_list_namespaces_extension + sed -r -i 's/^([[:blank:]]*)(def test_validate_file_list_namespaces_extension\()/\1@skip('\''Re-import issues'\'')\n\1\2/' tests/validation/test_validate.py + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.aKN3YZ + umask 022 + cd /builddir/build/BUILD/python-pynwb-2.7.0-build + cd pynwb-2.7.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/pyproject-wheeldir --output /builddir/build/BUILD/python-pynwb-2.7.0-build/python-pynwb-2.7.0-4.fc42.x86_64-pyproject-buildrequires requirements-unpinned.txt Handling hatchling from build-system.requires Requirement not satisfied: hatchling Handling hatch-vcs from build-system.requires Requirement not satisfied: hatch-vcs Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/python-pynwb-2.7.0-build/python-pynwb-2.7.0-4.fc42.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pynwb-2.7.0-4.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 119.7 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 76.6 KiB/s | 1.5 KiB | 00m00s fedora 100% | 276.3 KiB/s | 27.6 KiB | 00m00s Copr repository 100% | 25.5 MiB/s | 1.2 MiB | 00m00s Repositories loaded. Package "pyproject-rpm-macros-1.15.1-1.fc42.noarch" is already installed. Package "python3-devel-3.13.0-1.fc42.x86_64" is already installed. Package "python3-matplotlib-3.9.1-2.fc41.x86_64" is already installed. Package "python3-pytest-8.3.3-3.fc42.noarch" is already installed. Package "python3-packaging-24.1-2.fc42.noarch" is already installed. Package Arch Version Repository Size Installing: python3-hatch-vcs noarch 0.4.0-6.fc42 copr_base 33.6 KiB python3-hatchling noarch 1.25.0-3.fc42 copr_base 697.8 KiB python3-pip noarch 24.3.1-1.fc42 copr_base 11.3 MiB Installing dependencies: python3-pathspec noarch 0.12.1-7.fc42 copr_base 194.6 KiB python3-setuptools noarch 69.2.0-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.2 MiB python3-setuptools_scm noarch 8.1.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 320.0 KiB python3-trove-classifiers noarch 2024.10.21.16-2.fc42 copr_base 92.1 KiB Transaction Summary: Installing: 7 packages Total size of inbound packages is 4 MiB. Need to download 315 KiB. After this operation, 20 MiB extra will be used (install 20 MiB, remove 0 B). [1/3] python3-pip-0:24.3.1-1.fc42.noarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [2/6] python3-setuptools_scm-0:8.1.0-1. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [3/7] python3-setuptools-0:69.2.0-8.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [4/7] python3-hatch-vcs-0:0.4.0-6.fc42. 100% | 2.9 MiB/s | 23.5 KiB | 00m00s [5/7] python3-trove-classifiers-0:2024. 100% | 27.0 MiB/s | 27.6 KiB | 00m00s [6/7] python3-pathspec-0:0.12.1-7.fc42. 100% | 5.6 MiB/s | 56.9 KiB | 00m00s [7/7] python3-hatchling-0:1.25.0-3.fc42 100% | 18.4 MiB/s | 207.4 KiB | 00m00s -------------------------------------------------------------------------------- [7/7] Total 100% | 20.5 MiB/s | 315.5 KiB | 00m00s Running transaction [1/9] Verify package files 100% | 500.0 B/s | 7.0 B | 00m00s [2/9] Prepare transaction 100% | 368.0 B/s | 7.0 B | 00m00s [3/9] Installing python3-setuptools-0:6 100% | 271.5 MiB/s | 7.3 MiB | 00m00s [4/9] Installing python3-setuptools_scm 100% | 165.9 MiB/s | 339.7 KiB | 00m00s [5/9] Installing python3-trove-classifi 100% | 93.1 MiB/s | 95.3 KiB | 00m00s [6/9] Installing python3-pathspec-0:0.1 100% | 196.8 MiB/s | 201.5 KiB | 00m00s [7/9] Installing python3-hatchling-0:1. 100% | 104.2 MiB/s | 746.9 KiB | 00m00s [8/9] Installing python3-hatch-vcs-0:0. 100% | 12.9 MiB/s | 39.7 KiB | 00m00s [9/9] Installing python3-pip-0:24.3.1-1 100% | 196.9 MiB/s | 11.6 MiB | 00m00s Warning: skipped PGP checks for 7 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.ZBHdhh + umask 022 + cd /builddir/build/BUILD/python-pynwb-2.7.0-build + cd pynwb-2.7.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/pyproject-wheeldir --output /builddir/build/BUILD/python-pynwb-2.7.0-build/python-pynwb-2.7.0-4.fc42.x86_64-pyproject-buildrequires requirements-unpinned.txt Handling hatchling from build-system.requires Requirement satisfied: hatchling (installed: hatchling 1.25.0) Handling hatch-vcs from build-system.requires Requirement satisfied: hatch-vcs (installed: hatch-vcs 0.4.0) Handling h5py>=2.10 from hook generated metadata: Requires-Dist (pynwb) Requirement not satisfied: h5py>=2.10 Handling hdmf>=3.12.2 from hook generated metadata: Requires-Dist (pynwb) Requirement not satisfied: hdmf>=3.12.2 Handling numpy<2.0,>=1.18 from hook generated metadata: Requires-Dist (pynwb) Requirement satisfied: numpy<2.0,>=1.18 (installed: numpy 1.26.4) Handling pandas>=1.1.5 from hook generated metadata: Requires-Dist (pynwb) Requirement not satisfied: pandas>=1.1.5 Handling python-dateutil>=2.7.3 from hook generated metadata: Requires-Dist (pynwb) Requirement satisfied: python-dateutil>=2.7.3 (installed: python-dateutil 2.8.2) + cat /builddir/build/BUILD/python-pynwb-2.7.0-build/python-pynwb-2.7.0-4.fc42.x86_64-pyproject-buildrequires + rm -rfv pynwb-2.7.0.dist-info/ removed 'pynwb-2.7.0.dist-info/METADATA' removed directory 'pynwb-2.7.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pynwb-2.7.0-4.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 310.5 KiB/s | 27.6 KiB | 00m00s Copr repository 100% | 117.9 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 112.6 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Package "pyproject-rpm-macros-1.15.1-1.fc42.noarch" is already installed. Package "python3-devel-3.13.0-1.fc42.x86_64" is already installed. Package "python3-matplotlib-3.9.1-2.fc41.x86_64" is already installed. Package "python3-pytest-8.3.3-3.fc42.noarch" is already installed. Package "python3-hatch-vcs-0.4.0-6.fc42.noarch" is already installed. Package "python3-hatchling-1.25.0-3.fc42.noarch" is already installed. Package "python3-packaging-24.1-2.fc42.noarch" is already installed. Package "python3-pip-24.3.1-1.fc42.noarch" is already installed. Package "python3-dateutil-1:2.8.2-16.fc41.noarch" is already installed. Package Arch Version Repository Size Installing: python3-h5py x86_64 3.12.1-3.fc42 copr_base 4.4 MiB python3-hdmf noarch 3.14.3-1.fc42 copr_base 1.9 MiB python3-pandas x86_64 2.2.1-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 42.0 MiB Installing dependencies: hdf5 x86_64 1.14.5-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.1 MiB hdmf-common-schema noarch 1:1.8.0-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 18.6 KiB libaec x86_64 1.1.3-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 98.1 KiB liblzf x86_64 3.6-29.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 53.8 KiB python3-Bottleneck x86_64 1.3.7-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 627.3 KiB python3-attrs noarch 24.2.0-1.fc42 copr_base 394.7 KiB python3-cached_property noarch 2.0.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 34.8 KiB python3-charset-normalizer noarch 3.4.0-1.fc42 copr_base 319.9 KiB python3-idna noarch 3.9-1.fc42 copr_base 638.7 KiB python3-jsonschema noarch 4.19.1-6.fc42 copr_base 838.0 KiB python3-jsonschema-specifications noarch 2023.11.2-6.fc42 copr_base 45.8 KiB python3-numexpr x86_64 2.8.5-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 574.8 KiB python3-numpy-f2py x86_64 1:1.26.4-8.fc42 copr_base 2.8 MiB python3-platformdirs noarch 4.2.2-3.fc42 copr_base 162.0 KiB python3-pooch noarch 1.8.2-4.fc42 copr_base 621.1 KiB python3-pytz noarch 2024.2-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 223.7 KiB python3-referencing noarch 0.35.1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 326.0 KiB python3-requests noarch 2.32.3-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 485.9 KiB python3-rpds-py x86_64 0.20.0-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 688.2 KiB python3-ruamel-yaml noarch 0.18.5-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB python3-ruamel-yaml-clib x86_64 0.2.7-8.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 369.7 KiB python3-scipy x86_64 1.14.1-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.1 MiB python3-urllib3 noarch 2.2.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB Transaction Summary: Installing: 26 packages Total size of inbound packages is 32 MiB. Need to download 31 MiB. After this operation, 134 MiB extra will be used (install 134 MiB, remove 0 B). [ 1/19] python3-requests-0:2.32.3-3.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 2/26] python3-urllib3-0:2.2.3-3.fc42. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 3/26] python3-h5py-0:3.12.1-3.fc42.x8 100% | 94.1 MiB/s | 1.1 MiB | 00m00s [ 4/26] python3-Bottleneck-0:1.3.7-7.fc 100% | 3.0 MiB/s | 165.0 KiB | 00m00s [ 5/26] python3-hdmf-0:3.14.3-1.fc42.no 100% | 6.0 MiB/s | 453.0 KiB | 00m00s [ 6/26] python3-numexpr-0:2.8.5-7.fc41. 100% | 12.1 MiB/s | 161.7 KiB | 00m00s [ 7/26] python3-pytz-0:2024.2-1.fc42.no 100% | 3.9 MiB/s | 59.8 KiB | 00m00s [ 8/26] python3-numpy-f2py-1:1.26.4-8.f 100% | 122.5 MiB/s | 501.9 KiB | 00m00s [ 9/26] python3-pandas-0:2.2.1-7.fc41.x 100% | 74.7 MiB/s | 7.9 MiB | 00m00s [10/26] hdmf-common-schema-1:1.8.0-6.fc 100% | 1.1 MiB/s | 16.0 KiB | 00m00s [11/26] python3-jsonschema-0:4.19.1-6.f 100% | 184.3 MiB/s | 188.8 KiB | 00m00s [12/26] python3-ruamel-yaml-0:0.18.5-6. 100% | 14.1 MiB/s | 289.7 KiB | 00m00s [13/26] liblzf-0:3.6-29.fc41.x86_64 100% | 2.1 MiB/s | 28.0 KiB | 00m00s [14/26] python3-cached_property-0:2.0.1 100% | 2.4 MiB/s | 19.9 KiB | 00m00s [15/26] hdf5-0:1.14.5-1.fc42.x86_64 100% | 47.8 MiB/s | 2.1 MiB | 00m00s [16/26] python3-pooch-0:1.8.2-4.fc42.no 100% | 41.1 MiB/s | 126.3 KiB | 00m00s [17/26] libaec-0:1.1.3-1.fc42.x86_64 100% | 4.6 MiB/s | 37.4 KiB | 00m00s [18/26] python3-platformdirs-0:4.2.2-3. 100% | 40.6 MiB/s | 41.6 KiB | 00m00s [19/26] python3-attrs-0:24.2.0-1.fc42.n 100% | 116.0 MiB/s | 118.8 KiB | 00m00s [20/26] python3-jsonschema-specificatio 100% | 0.0 B/s | 21.8 KiB | 00m00s [21/26] python3-ruamel-yaml-clib-0:0.2. 100% | 9.4 MiB/s | 145.0 KiB | 00m00s [22/26] python3-referencing-0:0.35.1-3. 100% | 6.3 MiB/s | 77.3 KiB | 00m00s [23/26] python3-rpds-py-0:0.20.0-1.fc42 100% | 25.7 MiB/s | 289.8 KiB | 00m00s [24/26] python3-charset-normalizer-0:3. 100% | 7.1 MiB/s | 101.8 KiB | 00m00s [25/26] python3-idna-0:3.9-1.fc42.noarc 100% | 7.9 MiB/s | 113.2 KiB | 00m00s [26/26] python3-scipy-0:1.14.1-1.fc42.x 100% | 80.1 MiB/s | 17.1 MiB | 00m00s -------------------------------------------------------------------------------- [26/26] Total 100% | 105.4 MiB/s | 31.1 MiB | 00m00s Running transaction [ 1/28] Verify package files 100% | 292.0 B/s | 26.0 B | 00m00s [ 2/28] Prepare transaction 100% | 702.0 B/s | 26.0 B | 00m00s [ 3/28] Installing python3-ruamel-yaml- 100% | 181.9 MiB/s | 372.6 KiB | 00m00s [ 4/28] Installing python3-ruamel-yaml- 100% | 426.5 MiB/s | 1.7 MiB | 00m00s [ 5/28] Installing python3-idna-0:3.9-1 100% | 314.9 MiB/s | 645.0 KiB | 00m00s [ 6/28] Installing python3-rpds-py-0:0. 100% | 338.0 MiB/s | 692.2 KiB | 00m00s [ 7/28] Installing python3-attrs-0:24.2 100% | 199.8 MiB/s | 409.3 KiB | 00m00s [ 8/28] Installing python3-referencing- 100% | 327.8 MiB/s | 335.6 KiB | 00m00s [ 9/28] Installing python3-jsonschema-s 100% | 53.9 MiB/s | 55.1 KiB | 00m00s [10/28] Installing python3-jsonschema-0 100% | 279.4 MiB/s | 858.4 KiB | 00m00s [11/28] Installing python3-urllib3-0:2. 100% | 250.4 MiB/s | 1.0 MiB | 00m00s [12/28] Installing python3-charset-norm 100% | 161.0 MiB/s | 329.8 KiB | 00m00s [13/28] Installing python3-requests-0:2 100% | 243.2 MiB/s | 498.0 KiB | 00m00s [14/28] Installing python3-platformdirs 100% | 164.5 MiB/s | 168.4 KiB | 00m00s [15/28] Installing python3-pooch-0:1.8. 100% | 207.0 MiB/s | 636.0 KiB | 00m00s [16/28] Installing libaec-0:1.1.3-1.fc4 100% | 98.1 MiB/s | 100.5 KiB | 00m00s [17/28] Installing hdf5-0:1.14.5-1.fc42 100% | 355.9 MiB/s | 7.1 MiB | 00m00s [18/28] Installing python3-cached_prope 100% | 0.0 B/s | 37.5 KiB | 00m00s [19/28] Installing liblzf-0:3.6-29.fc41 100% | 54.8 MiB/s | 56.2 KiB | 00m00s [20/28] Installing python3-h5py-0:3.12. 100% | 369.6 MiB/s | 4.4 MiB | 00m00s [21/28] Installing hdmf-common-schema-1 100% | 20.3 MiB/s | 20.8 KiB | 00m00s [22/28] Installing python3-numpy-f2py-1 100% | 216.4 MiB/s | 2.8 MiB | 00m00s [23/28] Installing python3-scipy-0:1.14 100% | 421.7 MiB/s | 67.5 MiB | 00m00s [24/28] Installing python3-Bottleneck-0 100% | 159.1 MiB/s | 651.8 KiB | 00m00s [25/28] Installing python3-pytz-0:2024. 100% | 223.6 MiB/s | 229.0 KiB | 00m00s [26/28] Installing python3-numexpr-0:2. 100% | 142.3 MiB/s | 582.9 KiB | 00m00s [27/28] Installing python3-pandas-0:2.2 100% | 444.2 MiB/s | 42.2 MiB | 00m00s [28/28] Installing python3-hdmf-0:3.14. 100% | 76.7 MiB/s | 1.9 MiB | 00m00s Warning: skipped PGP checks for 26 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.ukV1AD + umask 022 + cd /builddir/build/BUILD/python-pynwb-2.7.0-build + cd pynwb-2.7.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/pyproject-wheeldir --output /builddir/build/BUILD/python-pynwb-2.7.0-build/python-pynwb-2.7.0-4.fc42.x86_64-pyproject-buildrequires requirements-unpinned.txt Handling hatchling from build-system.requires Requirement satisfied: hatchling (installed: hatchling 1.25.0) Handling hatch-vcs from build-system.requires Requirement satisfied: hatch-vcs (installed: hatch-vcs 0.4.0) Handling h5py>=2.10 from hook generated metadata: Requires-Dist (pynwb) Requirement satisfied: h5py>=2.10 (installed: h5py 3.12.1) Handling hdmf>=3.12.2 from hook generated metadata: Requires-Dist (pynwb) Requirement satisfied: hdmf>=3.12.2 (installed: hdmf 3.14.3) Handling numpy<2.0,>=1.18 from hook generated metadata: Requires-Dist (pynwb) Requirement satisfied: numpy<2.0,>=1.18 (installed: numpy 1.26.4) Handling pandas>=1.1.5 from hook generated metadata: Requires-Dist (pynwb) Requirement satisfied: pandas>=1.1.5 (installed: pandas 2.2.1) Handling python-dateutil>=2.7.3 from hook generated metadata: Requires-Dist (pynwb) Requirement satisfied: python-dateutil>=2.7.3 (installed: python-dateutil 2.8.2) + cat /builddir/build/BUILD/python-pynwb-2.7.0-build/python-pynwb-2.7.0-4.fc42.x86_64-pyproject-buildrequires + rm -rfv pynwb-2.7.0.dist-info/ removed 'pynwb-2.7.0.dist-info/METADATA' removed directory 'pynwb-2.7.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pynwb-2.7.0-4.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 160.7 KiB/s | 27.6 KiB | 00m00s Copr repository 100% | 95.8 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 81.5 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Package "pyproject-rpm-macros-1.15.1-1.fc42.noarch" is already installed. Package "python3-devel-3.13.0-1.fc42.x86_64" is already installed. Package "python3-matplotlib-3.9.1-2.fc41.x86_64" is already installed. Package "python3-pytest-8.3.3-3.fc42.noarch" is already installed. Package "python3-h5py-3.12.1-3.fc42.x86_64" is already installed. Package "python3-hatch-vcs-0.4.0-6.fc42.noarch" is already installed. Package "python3-hatchling-1.25.0-3.fc42.noarch" is already installed. Package "python3-hdmf-3.14.3-1.fc42.noarch" is already installed. Package "python3-packaging-24.1-2.fc42.noarch" is already installed. Package "python3-pandas-2.2.1-7.fc41.x86_64" is already installed. Package "python3-pip-24.3.1-1.fc42.noarch" is already installed. Package "python3-dateutil-1:2.8.2-16.fc41.noarch" is already installed. Nothing to do. Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.0pYWrM + umask 022 + cd /builddir/build/BUILD/python-pynwb-2.7.0-build + cd pynwb-2.7.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/pyproject-wheeldir --output /builddir/build/BUILD/python-pynwb-2.7.0-build/python-pynwb-2.7.0-4.fc42.x86_64-pyproject-buildrequires requirements-unpinned.txt Handling hatchling from build-system.requires Requirement satisfied: hatchling (installed: hatchling 1.25.0) Handling hatch-vcs from build-system.requires Requirement satisfied: hatch-vcs (installed: hatch-vcs 0.4.0) Handling h5py>=2.10 from hook generated metadata: Requires-Dist (pynwb) Requirement satisfied: h5py>=2.10 (installed: h5py 3.12.1) Handling hdmf>=3.12.2 from hook generated metadata: Requires-Dist (pynwb) Requirement satisfied: hdmf>=3.12.2 (installed: hdmf 3.14.3) Handling numpy<2.0,>=1.18 from hook generated metadata: Requires-Dist (pynwb) Requirement satisfied: numpy<2.0,>=1.18 (installed: numpy 1.26.4) Handling pandas>=1.1.5 from hook generated metadata: Requires-Dist (pynwb) Requirement satisfied: pandas>=1.1.5 (installed: pandas 2.2.1) Handling python-dateutil>=2.7.3 from hook generated metadata: Requires-Dist (pynwb) Requirement satisfied: python-dateutil>=2.7.3 (installed: python-dateutil 2.8.2) + cat /builddir/build/BUILD/python-pynwb-2.7.0-build/python-pynwb-2.7.0-4.fc42.x86_64-pyproject-buildrequires + rm -rfv pynwb-2.7.0.dist-info/ removed 'pynwb-2.7.0.dist-info/METADATA' removed directory 'pynwb-2.7.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.rwZm9w + umask 022 + cd /builddir/build/BUILD/python-pynwb-2.7.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd pynwb-2.7.0 + mkdir -p /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/pyproject-wheeldir Processing /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: pynwb Building wheel for pynwb (pyproject.toml): started Running command Building wheel for pynwb (pyproject.toml) Building wheel for pynwb (pyproject.toml): finished with status 'done' Created wheel for pynwb: filename=pynwb-2.7.0-py3-none-any.whl size=1382023 sha256=87d6e6d27678527826fff13fc9e695b5d7b077f146ef026cd5f05c51be0a1a57 Stored in directory: /builddir/.cache/pip/wheels/8f/8c/8d/7cc94970f3c51cc4ebaf53e1ebabf151f11817c959865fcc12 Successfully built pynwb + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.au5iPb + umask 022 + cd /builddir/build/BUILD/python-pynwb-2.7.0-build + '[' /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT ++ dirname /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT + mkdir -p /builddir/build/BUILD/python-pynwb-2.7.0-build + mkdir /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd pynwb-2.7.0 ++ ls /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/pyproject-wheeldir/pynwb-2.7.0-py3-none-any.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=pynwb==2.7.0 + '[' -z pynwb==2.7.0 ']' + TMPDIR=/builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/pyproject-wheeldir pynwb==2.7.0 Using pip 24.3.1 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/pyproject-wheeldir Processing ./pyproject-wheeldir/pynwb-2.7.0-py3-none-any.whl Installing collected packages: pynwb Successfully installed pynwb-2.7.0 + '[' -d /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/bin ']' + rm -f /builddir/build/BUILD/python-pynwb-2.7.0-build/python-pynwb-2.7.0-4.fc42.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + site_dirs+=("/usr/lib/python3.13/site-packages") + '[' /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.13/site-packages/pynwb-2.7.0.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb-2.7.0.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT --record /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb-2.7.0.dist-info/RECORD --output /builddir/build/BUILD/python-pynwb-2.7.0-build/python-pynwb-2.7.0-4.fc42.x86_64-pyproject-record + rm -fv /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb-2.7.0.dist-info/RECORD removed '/builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb-2.7.0.dist-info/RECORD' + rm -fv /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb-2.7.0.dist-info/REQUESTED removed '/builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb-2.7.0.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-pynwb-2.7.0-build/python-pynwb-2.7.0-4.fc42.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-pynwb-2.7.0-build/python-pynwb-2.7.0-4.fc42.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-pynwb-2.7.0-build/python-pynwb-2.7.0-4.fc42.x86_64-pyproject-modules --buildroot /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/python-pynwb-2.7.0-build/python-pynwb-2.7.0-4.fc42.x86_64-pyproject-record --prefix /usr pynwb + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13 using python3.13 /usr/lib/python3.13/site-packages/pynwb/nwb-schema/docs/format/source/conf.py:224: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/site-packages/pynwb/nwb-schema/docs/format/source/conf.py:224: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/site-packages/pynwb/nwb-schema/docs/storage/source/conf.py:195: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/site-packages/pynwb/nwb-schema/docs/storage/source/conf.py:195: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/site-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py:220: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.13/site-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py:220: SyntaxWarning: invalid escape sequence '\s' + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/__pycache__/validate.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/__pycache__/validate.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/__pycache__/retinotopy.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/__pycache__/resources.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/__pycache__/spec.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/__pycache__/ogen.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/__pycache__/image.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/__pycache__/ophys.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/__pycache__/misc.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/__pycache__/icephys.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/__pycache__/ecephys.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/__pycache__/device.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/__pycache__/_version.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/__pycache__/base.cpython-313.opt-1.pyc: replacing with normalized version 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0 errors Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.Mr2OjL + umask 022 + cd /builddir/build/BUILD/python-pynwb-2.7.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd pynwb-2.7.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/python3 src/pynwb/testing/make_test_files.py + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/python3 test.py --backwards --integration --pynwb --verbose ====================================================================== 2024-11-06 11:16:51,256 - INFO - running pynwb unit tests ====================================================================== 2024-11-06 11:16:51,368 - INFO - NumExpr defaulting to 4 threads. test_init (unit.test_base.TestImage.test_init) ... test_images (unit.test_base.TestImages.test_images) ... test_add_data_interface (unit.test_base.TestProcessingModule.test_add_data_interface) Test adding a data interface to a ProcessingModule using add(...) and retrieving it. ... test_deprecated_add_container (unit.test_base.TestProcessingModule.test_deprecated_add_container) ... test_deprecated_add_data_interface (unit.test_base.TestProcessingModule.test_deprecated_add_data_interface) ... test_deprecated_get_container (unit.test_base.TestProcessingModule.test_deprecated_get_container) ... test_deprecated_get_data_interface (unit.test_base.TestProcessingModule.test_deprecated_get_data_interface) ... test_get_data_interface (unit.test_base.TestProcessingModule.test_get_data_interface) Test adding a data interface to a ProcessingModule and retrieving it using get(...). ... test_getitem (unit.test_base.TestProcessingModule.test_getitem) Test adding a data interface to a ProcessingModule and retrieving it using __getitem__(...). ... test_init (unit.test_base.TestProcessingModule.test_init) Test creating a ProcessingModule. ... test_bad_continuity_timeseries (unit.test_base.TestTimeSeries.test_bad_continuity_timeseries) ... test_conflicting_time_args (unit.test_base.TestTimeSeries.test_conflicting_time_args) ... test_data_timeseries (unit.test_base.TestTimeSeries.test_data_timeseries) Test that setting a TimeSeries.data to another TimeSeries links the data correctly. ... test_dataio_dci_data (unit.test_base.TestTimeSeries.test_dataio_dci_data) ... test_dataio_dci_timestamps (unit.test_base.TestTimeSeries.test_dataio_dci_timestamps) ... test_dataio_list_data (unit.test_base.TestTimeSeries.test_dataio_list_data) ... test_dataio_list_timestamps (unit.test_base.TestTimeSeries.test_dataio_list_timestamps) ... test_dci_data (unit.test_base.TestTimeSeries.test_dci_data) ... test_dci_data_arr (unit.test_base.TestTimeSeries.test_dci_data_arr) ... test_dci_timestamps (unit.test_base.TestTimeSeries.test_dci_timestamps) ... test_dci_timestamps_arr (unit.test_base.TestTimeSeries.test_dci_timestamps_arr) ... test_dimension_warning (unit.test_base.TestTimeSeries.test_dimension_warning) ... test_file_with_non_positive_rate_in_construct_mode (unit.test_base.TestTimeSeries.test_file_with_non_positive_rate_in_construct_mode) Test that UserWarning is raised when rate is 0 or negative ... test_file_with_rate_and_timestamps_in_construct_mode (unit.test_base.TestTimeSeries.test_file_with_rate_and_timestamps_in_construct_mode) Test that UserWarning is raised when rate and timestamps are both specified ... test_file_with_starting_time_and_timestamps_in_construct_mode (unit.test_base.TestTimeSeries.test_file_with_starting_time_and_timestamps_in_construct_mode) Test that UserWarning is raised when starting_time and timestamps are both specified ... test_get_data_in_units (unit.test_base.TestTimeSeries.test_get_data_in_units) ... test_get_timestamps (unit.test_base.TestTimeSeries.test_get_timestamps) ... test_good_continuity_timeseries (unit.test_base.TestTimeSeries.test_good_continuity_timeseries) ... test_init_conversion_offset (unit.test_base.TestTimeSeries.test_init_conversion_offset) ... test_init_data_timestamps (unit.test_base.TestTimeSeries.test_init_data_timestamps) ... test_init_datalink_set (unit.test_base.TestTimeSeries.test_init_datalink_set) Test creating a TimeSeries and that data_link is an empty set. ... test_init_no_parent (unit.test_base.TestTimeSeries.test_init_no_parent) Test creating an empty TimeSeries and that it has no parent. ... test_init_rate (unit.test_base.TestTimeSeries.test_init_rate) ... test_init_timestampslink_set (unit.test_base.TestTimeSeries.test_init_timestampslink_set) Test creating a TimeSeries and that timestamps_link is an empty set. ... test_no_starting_time (unit.test_base.TestTimeSeries.test_no_starting_time) Test that if no starting_time is given, 0.0 is assumed. ... test_no_time (unit.test_base.TestTimeSeries.test_no_time) ... test_non_positive_rate (unit.test_base.TestTimeSeries.test_non_positive_rate) ... test_repr_html (unit.test_base.TestTimeSeries.test_repr_html) Test that html representation of linked timestamp data will occur as expected and will not cause a ... test_timestamps_timeseries (unit.test_base.TestTimeSeries.test_timestamps_timeseries) Test that setting a TimeSeries.timestamps to another TimeSeries links the timestamps correctly. ... test_check_types (unit.test_base.TestTimeSeriesReference.test_check_types) ... test_data_property (unit.test_base.TestTimeSeriesReference.test_data_property) ... test_data_property_bad_reference (unit.test_base.TestTimeSeriesReference.test_data_property_bad_reference) ... test_data_property_invalid_reference (unit.test_base.TestTimeSeriesReference.test_data_property_invalid_reference) ... test_empty_reference_creation (unit.test_base.TestTimeSeriesReference.test_empty_reference_creation) ... test_is_invalid (unit.test_base.TestTimeSeriesReference.test_is_invalid) ... test_is_valid (unit.test_base.TestTimeSeriesReference.test_is_valid) ... test_is_valid_bad_index (unit.test_base.TestTimeSeriesReference.test_is_valid_bad_index) ... test_is_valid_no_num_samples (unit.test_base.TestTimeSeriesReference.test_is_valid_no_num_samples) ... test_timestamps_property (unit.test_base.TestTimeSeriesReference.test_timestamps_property) ... test_timestamps_property_bad_reference (unit.test_base.TestTimeSeriesReference.test_timestamps_property_bad_reference) ... test_timestamps_property_invalid_reference (unit.test_base.TestTimeSeriesReference.test_timestamps_property_invalid_reference) ... test_add_row (unit.test_base.TestTimeSeriesReferenceVectorData.test_add_row) ... test_add_row_get_length1_valid_data (unit.test_base.TestTimeSeriesReferenceVectorData.test_add_row_get_length1_valid_data) Get data from a TimeSeriesReferenceVectorData with one element and valid data ... test_add_row_restricted_type (unit.test_base.TestTimeSeriesReferenceVectorData.test_add_row_restricted_type) ... test_add_row_with_bad_tuple (unit.test_base.TestTimeSeriesReferenceVectorData.test_add_row_with_bad_tuple) ... test_add_row_with_plain_tuple (unit.test_base.TestTimeSeriesReferenceVectorData.test_add_row_with_plain_tuple) ... test_append (unit.test_base.TestTimeSeriesReferenceVectorData.test_append) ... test_append_get_length1_valid_data (unit.test_base.TestTimeSeriesReferenceVectorData.test_append_get_length1_valid_data) Get data from a TimeSeriesReferenceVectorData with one element and valid data ... test_append_restricted_type (unit.test_base.TestTimeSeriesReferenceVectorData.test_append_restricted_type) ... test_append_with_bad_tuple (unit.test_base.TestTimeSeriesReferenceVectorData.test_append_with_bad_tuple) ... test_append_with_plain_tuple (unit.test_base.TestTimeSeriesReferenceVectorData.test_append_with_plain_tuple) ... test_get_empty (unit.test_base.TestTimeSeriesReferenceVectorData.test_get_empty) Get data from an empty TimeSeriesReferenceVectorData ... test_get_length1_invalid_data (unit.test_base.TestTimeSeriesReferenceVectorData.test_get_length1_invalid_data) Get data from a TimeSeriesReferenceVectorData with one element and invalid data ... test_get_length5_valid_data (unit.test_base.TestTimeSeriesReferenceVectorData.test_get_length5_valid_data) Get data from a TimeSeriesReferenceVectorData with 5 elements ... test_get_length5_with_invalid_data (unit.test_base.TestTimeSeriesReferenceVectorData.test_get_length5_with_invalid_data) Get data from a TimeSeriesReferenceVectorData with 5 elements ... test_init (unit.test_base.TestTimeSeriesReferenceVectorData.test_init) ... test_init (unit.test_behavior.BehavioralEpochsConstructor.test_init) ... test_init (unit.test_behavior.BehavioralEventsConstructor.test_init) ... test_init (unit.test_behavior.BehavioralTimeSeriesConstructor.test_init) ... test_init (unit.test_behavior.CompassDirectionConstructor.test_init) ... test_init (unit.test_behavior.EyeTrackingConstructor.test_init) ... test_init (unit.test_behavior.PositionConstructor.test_init) ... test_init (unit.test_behavior.PupilTrackingConstructor.test_init) ... test_gt_3_cols (unit.test_behavior.SpatialSeriesConstructor.test_gt_3_cols) ... test_init (unit.test_behavior.SpatialSeriesConstructor.test_init) ... test_set_unit (unit.test_behavior.SpatialSeriesConstructor.test_set_unit) ... test_available_namespaces (unit.test_core.TestAvailableNamespaces.test_available_namespaces) ... test_constructor (unit.test_core.TestNWBContainer.test_constructor) Test constructor ... test_nwbfields (unit.test_core.TestNWBContainer.test_nwbfields) Test that getters and setters work for nwbfields ... test_append_list (unit.test_core.TestNWBData.test_append_list) ... test_append_ndarray_2d (unit.test_core.TestNWBData.test_append_ndarray_2d) ... test_constructor (unit.test_core.TestNWBData.test_constructor) Test constructor ... test_extend_list (unit.test_core.TestNWBData.test_extend_list) ... test_extend_ndarray_1d (unit.test_core.TestNWBData.test_extend_ndarray_1d) ... test_extend_ndarray_2d (unit.test_core.TestNWBData.test_extend_ndarray_2d) ... test_print_file (unit.test_core.TestPrint.test_print_file) ... test_constructor (unit.test_core_NWBContainer.TestNWBContainer.test_constructor) Test constructor ... test_nwbfields (unit.test_core_NWBContainer.TestNWBContainer.test_nwbfields) Test that getters and setters work for nwbfields ... test_init (unit.test_device.TestDevice.test_init) ... test_init (unit.test_ecephys.ClusterWaveformsConstructor.test_init) ... test_init (unit.test_ecephys.ClusteringConstructor.test_init) ... test_dimensions_warning (unit.test_ecephys.ElectricalSeriesConstructor.test_dimensions_warning) ... test_get_data_in_units (unit.test_ecephys.ElectricalSeriesConstructor.test_get_data_in_units) ... test_init (unit.test_ecephys.ElectricalSeriesConstructor.test_init) ... test_invalid_data_shape (unit.test_ecephys.ElectricalSeriesConstructor.test_invalid_data_shape) ... test_link (unit.test_ecephys.ElectricalSeriesConstructor.test_link) ... test_init (unit.test_ecephys.ElectrodeGroupConstructor.test_init) ... test_init_position_bad (unit.test_ecephys.ElectrodeGroupConstructor.test_init_position_bad) ... test_init_position_none (unit.test_ecephys.ElectrodeGroupConstructor.test_init_position_none) ... test_init (unit.test_ecephys.EventDetectionConstructor.test_init) ... test_init (unit.test_ecephys.EventWaveformConstructor.test_init) ... test_init (unit.test_ecephys.FeatureExtractionConstructor.test_init) ... test_invalid_init_mismatched_description (unit.test_ecephys.FeatureExtractionConstructor.test_invalid_init_mismatched_description) ... test_invalid_init_mismatched_description2 (unit.test_ecephys.FeatureExtractionConstructor.test_invalid_init_mismatched_description2) ... test_invalid_init_mismatched_electrodes (unit.test_ecephys.FeatureExtractionConstructor.test_invalid_init_mismatched_electrodes) ... test_invalid_init_mismatched_event_times (unit.test_ecephys.FeatureExtractionConstructor.test_invalid_init_mismatched_event_times) ... test_add_electrical_series (unit.test_ecephys.FilteredEphysTest.test_add_electrical_series) ... test_init (unit.test_ecephys.FilteredEphysTest.test_init) ... test_add_electrical_series (unit.test_ecephys.LFPTest.test_add_electrical_series) ... test_init (unit.test_ecephys.LFPTest.test_init) ... test_incorrect_timestamps (unit.test_ecephys.SpikeEventSeriesConstructor.test_incorrect_timestamps) ... test_init (unit.test_ecephys.SpikeEventSeriesConstructor.test_init) ... test_no_rate (unit.test_ecephys.SpikeEventSeriesConstructor.test_no_rate) ... test_dataframe_roundtrip (unit.test_epoch.TimeIntervalsTest.test_dataframe_roundtrip) ... test_dataframe_roundtrip_drop_ts (unit.test_epoch.TimeIntervalsTest.test_dataframe_roundtrip_drop_ts) ... test_from_dataframe (unit.test_epoch.TimeIntervalsTest.test_from_dataframe) ... test_from_dataframe_missing_required_cols (unit.test_epoch.TimeIntervalsTest.test_from_dataframe_missing_required_cols) ... test_from_dataframe_missing_supplied_col (unit.test_epoch.TimeIntervalsTest.test_from_dataframe_missing_supplied_col) ... test_init (unit.test_epoch.TimeIntervalsTest.test_init) ... test_no_tags (unit.test_epoch.TimeIntervalsTest.test_no_tags) ... test_legacy_format (unit.test_epoch_legacy.TestTimeIntervalsIO.test_legacy_format) ... test_roundtrip (unit.test_epoch_legacy.TestTimeIntervalsIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (unit.test_epoch_legacy.TestTimeIntervalsIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_catch_dup_name (unit.test_extension.TestCatchDupNS.test_catch_dup_name) ... test_export (unit.test_extension.TestExtension.test_export) ... test_get_class (unit.test_extension.TestExtension.test_get_class) ... test_lab_meta (unit.test_extension.TestExtension.test_lab_meta) ... test_lab_meta_auto (unit.test_extension.TestExtension.test_lab_meta_auto) ... test_load_namespace (unit.test_extension.TestExtension.test_load_namespace) ... test_load_namespace_with_reftype_attribute (unit.test_extension.TestExtension.test_load_namespace_with_reftype_attribute) ... test_load_namespace_with_reftype_attribute_check_autoclass_const (unit.test_extension.TestExtension.test_load_namespace_with_reftype_attribute_check_autoclass_const) ... test_access_group_after_io (unit.test_file.NWBFileTest.test_access_group_after_io) Motivated by #739 ... test_access_processing (unit.test_file.NWBFileTest.test_access_processing) ... test_add_acquisition (unit.test_file.NWBFileTest.test_add_acquisition) ... test_add_acquisition_check_dups (unit.test_file.NWBFileTest.test_add_acquisition_check_dups) ... test_add_acquisition_invalid_name (unit.test_file.NWBFileTest.test_add_acquisition_invalid_name) ... test_add_analysis (unit.test_file.NWBFileTest.test_add_analysis) ... test_add_electrode (unit.test_file.NWBFileTest.test_add_electrode) ... test_add_electrode_missing_group (unit.test_file.NWBFileTest.test_add_electrode_missing_group) Test the case where the user creates an electrode table region with ... test_add_electrode_missing_location (unit.test_file.NWBFileTest.test_add_electrode_missing_location) Test the case where the user creates an electrode table region with ... test_add_electrode_some_opt (unit.test_file.NWBFileTest.test_add_electrode_some_opt) ... test_add_invalid_time_interval (unit.test_file.NWBFileTest.test_add_invalid_time_interval) ... test_add_invalid_time_w_ts (unit.test_file.NWBFileTest.test_add_invalid_time_w_ts) ... test_add_invalid_times_column (unit.test_file.NWBFileTest.test_add_invalid_times_column) ... test_add_stimulus (unit.test_file.NWBFileTest.test_add_stimulus) ... test_add_stimulus_dynamic_table (unit.test_file.NWBFileTest.test_add_stimulus_dynamic_table) ... test_add_stimulus_no_stimulus_arg (unit.test_file.NWBFileTest.test_add_stimulus_no_stimulus_arg) Test nwbfile.add_stimulus using the deprecated 'timeseries' keyword argument ... test_add_stimulus_template (unit.test_file.NWBFileTest.test_add_stimulus_template) ... test_add_stimulus_template_images (unit.test_file.NWBFileTest.test_add_stimulus_template_images) ... test_add_stimulus_timeseries_arg (unit.test_file.NWBFileTest.test_add_stimulus_timeseries_arg) Test nwbfile.add_stimulus using the deprecated 'timeseries' keyword argument ... test_add_trial (unit.test_file.NWBFileTest.test_add_trial) ... test_add_trial_column (unit.test_file.NWBFileTest.test_add_trial_column) ... test_add_trial_column_custom_class (unit.test_file.NWBFileTest.test_add_trial_column_custom_class) ... test_add_unit (unit.test_file.NWBFileTest.test_add_unit) ... test_add_unit_column (unit.test_file.NWBFileTest.test_add_unit_column) ... test_all_children (unit.test_file.NWBFileTest.test_all_children) ... test_constructor (unit.test_file.NWBFileTest.test_constructor) ... test_copy (unit.test_file.NWBFileTest.test_copy) ... test_create_custom_intervals (unit.test_file.NWBFileTest.test_create_custom_intervals) ... test_create_electrode_group (unit.test_file.NWBFileTest.test_create_electrode_group) ... test_create_electrode_group_invalid_index (unit.test_file.NWBFileTest.test_create_electrode_group_invalid_index) Test the case where the user creates an electrode table region with ... test_epoch_tags (unit.test_file.NWBFileTest.test_epoch_tags) ... test_fail_if_source_script_file_name_without_source_script (unit.test_file.NWBFileTest.test_fail_if_source_script_file_name_without_source_script) ... test_get_acquisition_empty (unit.test_file.NWBFileTest.test_get_acquisition_empty) ... test_get_acquisition_multiple_elements (unit.test_file.NWBFileTest.test_get_acquisition_multiple_elements) ... test_get_neurodata_type (unit.test_file.NWBFileTest.test_get_neurodata_type) ... test_multi_experimenters (unit.test_file.NWBFileTest.test_multi_experimenters) ... test_multi_publications (unit.test_file.NWBFileTest.test_multi_publications) ... test_print_units (unit.test_file.NWBFileTest.test_print_units) ... test_session_start_time_no_time (unit.test_file.NWBFileTest.test_session_start_time_no_time) ... test_session_start_time_no_timezone (unit.test_file.NWBFileTest.test_session_start_time_no_timezone) ... test_set_electrode_table (unit.test_file.NWBFileTest.test_set_electrode_table) ... test_age_reference_arg_check (unit.test_file.SubjectTest.test_age_reference_arg_check) ... test_age_regression_1 (unit.test_file.SubjectTest.test_age_regression_1) ... test_age_regression_2 (unit.test_file.SubjectTest.test_age_regression_2) ... test_constructor (unit.test_file.SubjectTest.test_constructor) ... test_dob_no_time (unit.test_file.SubjectTest.test_dob_no_time) ... test_dob_no_timezone (unit.test_file.SubjectTest.test_dob_no_timezone) ... test_nwbfile_constructor (unit.test_file.SubjectTest.test_nwbfile_constructor) ... test_subject_age_duration (unit.test_file.SubjectTest.test_subject_age_duration) ... test_weight_float (unit.test_file.SubjectTest.test_weight_float) ... test_simple (unit.test_file.TestCacheSpec.test_simple) ... test_simple (unit.test_file.TestNoCacheSpec.test_simple) ... test_reftime_default (unit.test_file.TestTimestampsRefDefault.test_reftime_default) ... test_init (unit.test_icephys.CurrentClampSeriesConstructor.test_init) ... test_unit_warning (unit.test_icephys.CurrentClampSeriesConstructor.test_unit_warning) ... test_init (unit.test_icephys.CurrentClampStimulusSeriesConstructor.test_init) ... test_unit_warning (unit.test_icephys.CurrentClampStimulusSeriesConstructor.test_unit_warning) ... test_init (unit.test_icephys.IZeroClampSeriesConstructor.test_init) ... test_stim_desc_warning (unit.test_icephys.IZeroClampSeriesConstructor.test_stim_desc_warning) ... test_unit_warning (unit.test_icephys.IZeroClampSeriesConstructor.test_unit_warning) ... test_constructor (unit.test_icephys.IntracellularElectrodeConstructor.test_constructor) ... test_add_ic_electrode_deprecation (unit.test_icephys.NWBFileICEphys.test_add_ic_electrode_deprecation) ... test_create_ic_electrode_deprecation (unit.test_icephys.NWBFileICEphys.test_create_ic_electrode_deprecation) ... test_ic_electrodes_attribute_deprecation (unit.test_icephys.NWBFileICEphys.test_ic_electrodes_attribute_deprecation) ... test_ic_electrodes_parameter_deprecation (unit.test_icephys.NWBFileICEphys.test_ic_electrodes_parameter_deprecation) ... test_icephys_electrodes_parameter (unit.test_icephys.NWBFileICEphys.test_icephys_electrodes_parameter) ... test_sweep_table_depractation_warn (unit.test_icephys.NWBFileICEphys.test_sweep_table_depractation_warn) ... test_data_shape (unit.test_icephys.PatchClampSeriesConstructor.test_data_shape) ... test_default (unit.test_icephys.PatchClampSeriesConstructor.test_default) ... test_sweepNumber_large_and_valid (unit.test_icephys.PatchClampSeriesConstructor.test_sweepNumber_large_and_valid) ... test_sweepNumber_throws_with_Float (unit.test_icephys.PatchClampSeriesConstructor.test_sweepNumber_throws_with_Float) ... test_sweepNumber_throws_with_NaN (unit.test_icephys.PatchClampSeriesConstructor.test_sweepNumber_throws_with_NaN) ... test_sweepNumber_throws_with_negative (unit.test_icephys.PatchClampSeriesConstructor.test_sweepNumber_throws_with_negative) ... test_sweepNumber_valid (unit.test_icephys.PatchClampSeriesConstructor.test_sweepNumber_valid) ... test_sweepNumber_valid_np (unit.test_icephys.PatchClampSeriesConstructor.test_sweepNumber_valid_np) ... test_init (unit.test_icephys.VoltageClampSeriesConstructor.test_init) ... test_unit_warning (unit.test_icephys.VoltageClampSeriesConstructor.test_unit_warning) ... test_init (unit.test_icephys.VoltageClampStimulusSeriesConstructor.test_init) ... test_unit_warning (unit.test_icephys.VoltageClampStimulusSeriesConstructor.test_unit_warning) ... test_basic_write (unit.test_icephys_metadata_tables.ExperimentalConditionsTableTests.test_basic_write) Populate, write, and read the ExperimentalConditionsTable container and other required containers ... test_enforce_unique_id (unit.test_icephys_metadata_tables.ExperimentalConditionsTableTests.test_enforce_unique_id) Test to ensure that unique ids are enforced on RepetitionsTable table ... test_init (unit.test_icephys_metadata_tables.ExperimentalConditionsTableTests.test_init) Test __init__ to make sure we can instantiate the ExperimentalConditionsTable container ... test_missing_repetitions_on_init (unit.test_icephys_metadata_tables.ExperimentalConditionsTableTests.test_missing_repetitions_on_init) Test that ValueError is raised when repetitions is missing. This is ... test_add_column (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_add_column) ... test_add_row (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_add_row) ... test_add_row_check_start_index_and_index_count_are_fixed (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_add_row_check_start_index_and_index_count_are_fixed) ... test_add_row_incompatible_types (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_add_row_incompatible_types) ... test_add_row_index_out_of_range (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_add_row_index_out_of_range) ... test_add_row_no_response (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_add_row_no_response) ... test_add_row_no_stimulus (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_add_row_no_stimulus) ... test_add_row_no_stimulus_and_response (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_add_row_no_stimulus_and_response) ... test_add_row_with_no_stimulus_template_when_stimulus_template_column_exists (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_add_row_with_no_stimulus_template_when_stimulus_template_column_exists) ... test_add_row_with_stimulus_template (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_add_row_with_stimulus_template) ... test_add_stimulus_template_column (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_add_stimulus_template_column) ... test_basic_write (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_basic_write) Populate, write, and read the SimultaneousRecordingsTable container and other required containers ... test_enforce_unique_id (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_enforce_unique_id) Test to ensure that unique ids are enforced on RepetitionsTable table ... test_error_if_IZeroClampSeries_with_stimulus (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_error_if_IZeroClampSeries_with_stimulus) ... test_inconsistent_PatchClampSeries (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_inconsistent_PatchClampSeries) ... test_init (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_init) ... test_no_electrode (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_no_electrode) ... test_noerror_if_IZeroClampSeries (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_noerror_if_IZeroClampSeries) ... test_round_trip_container_no_data (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_round_trip_container_no_data) Test read and write the container by itself ... test_to_dataframe (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_to_dataframe) ... test_write_with_stimulus_template (unit.test_icephys_metadata_tables.IntracellularRecordingsTableTests.test_write_with_stimulus_template) Populate, write, and read the SimultaneousRecordingsTable container and other required containers ... test_add_icephys_meta_full_roundtrip (unit.test_icephys_metadata_tables.NWBFileTests.test_add_icephys_meta_full_roundtrip) This test adds all data and then constructs step-by-step the full table structure ... test_deprecate_simultaneous_recordings_on_add_stimulus (unit.test_icephys_metadata_tables.NWBFileTests.test_deprecate_simultaneous_recordings_on_add_stimulus) Test that warnings are raised if the user tries to use a simultaneous_recordings table ... test_deprecate_sweepstable_on_add_acquistion (unit.test_icephys_metadata_tables.NWBFileTests.test_deprecate_sweepstable_on_add_acquistion) Test that warnings are raised if the user tries to use a sweeps table ... test_deprecate_sweepstable_on_init (unit.test_icephys_metadata_tables.NWBFileTests.test_deprecate_sweepstable_on_init) Test that warnings are raised if the user tries to use a sweeps table ... test_deprecate_sweeptable_on_add_stimulus_template (unit.test_icephys_metadata_tables.NWBFileTests.test_deprecate_sweeptable_on_add_stimulus_template) Make sure we warn when using the sweep-table ... test_deprectation_icephys_filtering_on_init (unit.test_icephys_metadata_tables.NWBFileTests.test_deprectation_icephys_filtering_on_init) ... test_get_icephys_meta_parent_table (unit.test_icephys_metadata_tables.NWBFileTests.test_get_icephys_meta_parent_table) Create the table hierarchy step-by-step and check that as we add tables the get_icephys_meta_parent_table ... test_icephys_filtering_roundtrip (unit.test_icephys_metadata_tables.NWBFileTests.test_icephys_filtering_roundtrip) ... test_basic_write (unit.test_icephys_metadata_tables.RepetitionsTableTests.test_basic_write) Populate, write, and read the RepetitionsTable container and other required containers ... test_enforce_unique_id (unit.test_icephys_metadata_tables.RepetitionsTableTests.test_enforce_unique_id) Test to ensure that unique ids are enforced on RepetitionsTable table ... test_init (unit.test_icephys_metadata_tables.RepetitionsTableTests.test_init) Test __init__ to make sure we can instantiate the RepetitionsTable container ... test_missing_sequential_recordings_on_init (unit.test_icephys_metadata_tables.RepetitionsTableTests.test_missing_sequential_recordings_on_init) Test that ValueError is raised when sequential_recordings is missing. This is ... test_basic_write (unit.test_icephys_metadata_tables.SequentialRecordingsTableTests.test_basic_write) Populate, write, and read the SequentialRecordingsTable container and other required containers ... test_enforce_unique_id (unit.test_icephys_metadata_tables.SequentialRecordingsTableTests.test_enforce_unique_id) Test to ensure that unique ids are enforced on RepetitionsTable table ... test_init (unit.test_icephys_metadata_tables.SequentialRecordingsTableTests.test_init) Test __init__ to make sure we can instantiate the SequentialRecordingsTable container ... test_missing_simultaneous_recordings_on_init (unit.test_icephys_metadata_tables.SequentialRecordingsTableTests.test_missing_simultaneous_recordings_on_init) Test that ValueError is raised when simultaneous_recordings is missing. This is ... test_add_simultaneous_recording (unit.test_icephys_metadata_tables.SimultaneousRecordingsTableTests.test_add_simultaneous_recording) Populate, write, and read the SimultaneousRecordingsTable container and other required containers ... test_basic_write (unit.test_icephys_metadata_tables.SimultaneousRecordingsTableTests.test_basic_write) Populate, write, and read the SimultaneousRecordingsTable container and other required containers ... test_enforce_unique_id (unit.test_icephys_metadata_tables.SimultaneousRecordingsTableTests.test_enforce_unique_id) Test to ensure that unique ids are enforced on RepetitionsTable table ... test_init (unit.test_icephys_metadata_tables.SimultaneousRecordingsTableTests.test_init) Test __init__ to make sure we can instantiate the SimultaneousRecordingsTable container ... test_missing_intracellular_recordings_on_init (unit.test_icephys_metadata_tables.SimultaneousRecordingsTableTests.test_missing_intracellular_recordings_on_init) Test that ValueError is raised when intracellular_recordings is missing. This is ... test_init (unit.test_image.ImageMaskSeriesConstructor.test_init) ... test_data_no_frame (unit.test_image.ImageSeriesConstructor.test_data_no_frame) ... test_data_no_unit (unit.test_image.ImageSeriesConstructor.test_data_no_unit) ... test_dimension_warning (unit.test_image.ImageSeriesConstructor.test_dimension_warning) Test that a warning is raised when the dimensions of the data are not the ... test_dimension_warning_external_file_with_rate (unit.test_image.ImageSeriesConstructor.test_dimension_warning_external_file_with_rate) Test that a warning is not raised when external file is used with rate. ... test_dimension_warning_external_file_with_timestamps (unit.test_image.ImageSeriesConstructor.test_dimension_warning_external_file_with_timestamps) Test that a warning is not raised when external file is used with timestamps. ... test_external_file_default_format (unit.test_image.ImageSeriesConstructor.test_external_file_default_format) Test that format is set to 'external' if not provided, when external_file is provided. ... test_external_file_no_frame (unit.test_image.ImageSeriesConstructor.test_external_file_no_frame) ... test_external_file_no_unit (unit.test_image.ImageSeriesConstructor.test_external_file_no_unit) ... test_external_file_with_correct_format (unit.test_image.ImageSeriesConstructor.test_external_file_with_correct_format) Test that warning is not raised when external_file is provided and format ... test_external_file_with_correct_starting_frame (unit.test_image.ImageSeriesConstructor.test_external_file_with_correct_starting_frame) Test that ValueError is not raised when the length of starting_frame ... test_external_file_with_data (unit.test_image.ImageSeriesConstructor.test_external_file_with_data) Test that ValueError is raised when external_file is provided and ... test_external_file_with_data_construct_mode (unit.test_image.ImageSeriesConstructor.test_external_file_with_data_construct_mode) Test that UserWarning is raised when external_file is provided and ... test_external_file_with_default_starting_frame (unit.test_image.ImageSeriesConstructor.test_external_file_with_default_starting_frame) Test that starting_frame is set to [0] if not provided, when external_file is has length 1. ... test_external_file_with_incorrect_format (unit.test_image.ImageSeriesConstructor.test_external_file_with_incorrect_format) Test that ValueError is raised when external_file is provided but ... test_external_file_with_incorrect_format_construct_mode (unit.test_image.ImageSeriesConstructor.test_external_file_with_incorrect_format_construct_mode) Test that UserWarning is raised when external_file is provided but ... test_external_file_with_incorrect_starting_frame (unit.test_image.ImageSeriesConstructor.test_external_file_with_incorrect_starting_frame) Test that ValueError is raised when the length of starting_frame ... test_external_file_with_incorrect_starting_frame_construct_mode (unit.test_image.ImageSeriesConstructor.test_external_file_with_incorrect_starting_frame_construct_mode) Test that warning is raised when the length of starting_frame ... test_init (unit.test_image.ImageSeriesConstructor.test_init) ... test_no_data_no_file (unit.test_image.ImageSeriesConstructor.test_no_data_no_file) ... test_init (unit.test_image.IndexSeriesConstructor.test_init) ... test_init_bad_unit (unit.test_image.IndexSeriesConstructor.test_init_bad_unit) ... test_init_indexed_ts (unit.test_image.IndexSeriesConstructor.test_init_indexed_ts) ... test_init (unit.test_image.OpticalSeriesConstructor.test_init) ... test_grayscale_image (unit.test_image.TestImageSubtypes.test_grayscale_image) ... test_rgb_image (unit.test_image.TestImageSubtypes.test_rgb_image) ... test_rgba_image (unit.test_image.TestImageSubtypes.test_rgba_image) ... test_init (unit.test_misc.AbstractFeatureSeriesConstructor.test_init) ... test_init (unit.test_misc.AnnotationSeriesConstructor.test_init) ... test_init (unit.test_misc.DecompositionSeriesConstructor.test_init) ... test_init_delayed_bands (unit.test_misc.DecompositionSeriesConstructor.test_init_delayed_bands) ... test_init_with_source_channels (unit.test_misc.DecompositionSeriesConstructor.test_init_with_source_channels) ... test_add_interval (unit.test_misc.IntervalSeriesConstructor.test_add_interval) ... test_init (unit.test_misc.IntervalSeriesConstructor.test_init) ... test_add_spike_times (unit.test_misc.UnitsTests.test_add_spike_times) ... test_add_waveforms (unit.test_misc.UnitsTests.test_add_waveforms) ... test_electrode_group (unit.test_misc.UnitsTests.test_electrode_group) ... test_get_obs_intervals (unit.test_misc.UnitsTests.test_get_obs_intervals) ... test_get_spike_times (unit.test_misc.UnitsTests.test_get_spike_times) ... test_get_spike_times_interval (unit.test_misc.UnitsTests.test_get_spike_times_interval) ... test_get_spike_times_multi (unit.test_misc.UnitsTests.test_get_spike_times_multi) ... test_get_spike_times_multi_interval (unit.test_misc.UnitsTests.test_get_spike_times_multi_interval) ... test_init (unit.test_misc.UnitsTests.test_init) ... test_obs_intervals (unit.test_misc.UnitsTests.test_obs_intervals) ... test_times (unit.test_misc.UnitsTests.test_times) ... test_times_and_intervals (unit.test_misc.UnitsTests.test_times_and_intervals) ... test_waveform_attrs (unit.test_misc.UnitsTests.test_waveform_attrs) ... test_init (unit.test_ogen.OptogeneticSeriesConstructor.test_init) ... test_init (unit.test_ophys.CorrectedImageStackConstructor.test_init) ... test_init (unit.test_ophys.DfOverFConstructor.test_init) ... test_init (unit.test_ophys.FluorescenceConstructor.test_init) ... test_init (unit.test_ophys.ImageSegmentationConstructor.test_init) ... test_conversion_deprecated (unit.test_ophys.ImagingPlaneConstructor.test_conversion_deprecated) ... test_init (unit.test_ophys.ImagingPlaneConstructor.test_init) ... test_manifold_deprecated (unit.test_ophys.ImagingPlaneConstructor.test_manifold_deprecated) ... test_unit_deprecated (unit.test_ophys.ImagingPlaneConstructor.test_unit_deprecated) ... test_init (unit.test_ophys.MotionCorrectionConstructor.test_init) ... test_init (unit.test_ophys.OnePhotonSeriesConstructor.test_init) ... test_negative_binning_assertion (unit.test_ophys.OnePhotonSeriesConstructor.test_negative_binning_assertion) ... test_init (unit.test_ophys.OpticalChannelConstructor.test_init) ... test_conversion_of_2d_image_mask_to_pixel_mask (unit.test_ophys.PlaneSegmentationConstructor.test_conversion_of_2d_image_mask_to_pixel_mask) ... test_conversion_of_2d_pixel_mask_to_image_mask (unit.test_ophys.PlaneSegmentationConstructor.test_conversion_of_2d_pixel_mask_to_image_mask) ... test_init (unit.test_ophys.PlaneSegmentationConstructor.test_init) ... test_init_3d_image_mask (unit.test_ophys.PlaneSegmentationConstructor.test_init_3d_image_mask) ... test_init_image_mask (unit.test_ophys.PlaneSegmentationConstructor.test_init_image_mask) ... test_init_pixel_mask (unit.test_ophys.PlaneSegmentationConstructor.test_init_pixel_mask) ... test_init_voxel_mask (unit.test_ophys.PlaneSegmentationConstructor.test_init_voxel_mask) ... test_init (unit.test_ophys.RoiResponseSeriesConstructor.test_init) ... test_warnings (unit.test_ophys.RoiResponseSeriesConstructor.test_warnings) ... test_init (unit.test_ophys.TwoPhotonSeriesConstructor.test_init) ... test_constructor (unit.test_resources.TestNWBContainer.test_constructor) Test constructor ... test_retinotopy_deprecated (unit.test_retinotopy.TestRetinotopy.test_retinotopy_deprecated) ... test_add_scratch_container (unit.test_scratch.TestScratchData.test_add_scratch_container) ... test_add_scratch_container_description (unit.test_scratch.TestScratchData.test_add_scratch_container_description) ... test_add_scratch_container_name (unit.test_scratch.TestScratchData.test_add_scratch_container_name) ... test_add_scratch_dataframe (unit.test_scratch.TestScratchData.test_add_scratch_dataframe) ... test_add_scratch_dataframe_no_description (unit.test_scratch.TestScratchData.test_add_scratch_dataframe_no_description) ... test_add_scratch_dynamictable (unit.test_scratch.TestScratchData.test_add_scratch_dynamictable) ... test_add_scratch_int (unit.test_scratch.TestScratchData.test_add_scratch_int) ... test_add_scratch_list (unit.test_scratch.TestScratchData.test_add_scratch_list) ... test_add_scratch_list_no_name (unit.test_scratch.TestScratchData.test_add_scratch_list_no_name) ... test_add_scratch_ndarray (unit.test_scratch.TestScratchData.test_add_scratch_ndarray) ... test_add_scratch_ndarray_no_description (unit.test_scratch.TestScratchData.test_add_scratch_ndarray_no_description) ... test_add_scratch_scratchdata (unit.test_scratch.TestScratchData.test_add_scratch_scratchdata) ... test_constructor_list (unit.test_scratch.TestScratchData.test_constructor_list) ... test_get_scratch_df_convert_false (unit.test_scratch.TestScratchData.test_get_scratch_df_convert_false) ... test_get_scratch_list_convert_false (unit.test_scratch.TestScratchData.test_get_scratch_list_convert_false) ... test_constructor (unit.test_spec.NWBNamespaceTest.test_constructor) ... test_constructor (unit.test_spec.NWBRefSpecTests.test_constructor) ... test_wrong_reference_type (unit.test_spec.NWBRefSpecTests.test_wrong_reference_type) ... ---------------------------------------------------------------------- Ran 346 tests in 25.599s OK ====================================================================== 2024-11-06 11:17:17,667 - INFO - running integration tests test_roundtrip (integration.hdf5.test_base.TestImagesIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... /usr/lib/python3.13/site-packages/hdmf/build/objectmapper.py:859: IncorrectDatasetShapeBuildWarning: Shape of data does not match shape in spec 'ImageReferences' warnings.warn(msg, IncorrectDatasetShapeBuildWarning) test_roundtrip_export (integration.hdf5.test_base.TestImagesIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... /usr/lib/python3.13/site-packages/hdmf/build/objectmapper.py:859: IncorrectDatasetShapeBuildWarning: Shape of data does not match shape in spec 'ImageReferences' warnings.warn(msg, IncorrectDatasetShapeBuildWarning) test_roundtrip (integration.hdf5.test_base.TestTimeSeriesIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_base.TestTimeSeriesIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_data_linking (integration.hdf5.test_base.TestTimeSeriesLinking.test_data_linking) Test that data get linked to in TimeSeries ... test_timestamps_linking (integration.hdf5.test_base.TestTimeSeriesLinking.test_timestamps_linking) Test that timestamps get linked to in TimeSeries ... test_roundtrip (integration.hdf5.test_behavior.TestSpatialSeriesIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_behavior.TestSpatialSeriesIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_device.TestDeviceIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_device.TestDeviceIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ecephys.ClusterWaveformsConstructor.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ecephys.ClusterWaveformsConstructor.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ecephys.EventDetectionConstructor.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ecephys.EventDetectionConstructor.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ecephys.EventWaveformConstructor.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ecephys.EventWaveformConstructor.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ecephys.FeatureExtractionConstructor.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ecephys.FeatureExtractionConstructor.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ecephys.TestClusteringIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ecephys.TestClusteringIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_eg_ref (integration.hdf5.test_ecephys.TestElectricalSeriesIO.test_eg_ref) Test that the electrode DynamicTableRegion references of the read ElectricalSeries have a group that ... test_roundtrip (integration.hdf5.test_ecephys.TestElectricalSeriesIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ecephys.TestElectricalSeriesIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ecephys.TestElectrodeGroupIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ecephys.TestElectrodeGroupIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ecephys.TestFilteredEphysIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ecephys.TestFilteredEphysIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ecephys.TestLFPIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ecephys.TestLFPIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_extension.TestDynamicTableCustomColumnWithArgs.test_roundtrip) ... test_roundtrip_export (integration.hdf5.test_extension.TestDynamicTableCustomColumnWithArgs.test_roundtrip_export) ... test_copy_file_link_timeintervals_timeseries (integration.hdf5.test_file_copy.TestFileCopy.test_copy_file_link_timeintervals_timeseries) Test copying a file with a TimeSeriesReference in a TimeIntervals object and reading that copy. ... test_roundtrip (integration.hdf5.test_icephys.TestCurrentClampSeries.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_icephys.TestCurrentClampSeries.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_icephys.TestCurrentClampStimulusSeries.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_icephys.TestCurrentClampStimulusSeries.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_icephys.TestIZeroClampSeries.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_icephys.TestIZeroClampSeries.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_icephys.TestIntracellularElectrode.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_icephys.TestIntracellularElectrode.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_icephys.TestPatchClampSeries.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_icephys.TestPatchClampSeries.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_container (integration.hdf5.test_icephys.TestSweepTableRoundTripComplicated.test_container) Test properties of the SweepTable read from file ... test_roundtrip (integration.hdf5.test_icephys.TestSweepTableRoundTripComplicated.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_icephys.TestSweepTableRoundTripComplicated.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_container (integration.hdf5.test_icephys.TestSweepTableRoundTripEasy.test_container) Test properties of the SweepTable read from file ... test_roundtrip (integration.hdf5.test_icephys.TestSweepTableRoundTripEasy.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_icephys.TestSweepTableRoundTripEasy.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_icephys.TestVoltageClampSeries.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_icephys.TestVoltageClampSeries.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_icephys.TestVoltageClampStimulusSeries.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_icephys.TestVoltageClampStimulusSeries.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_image.TestImageSeriesIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_image.TestImageSeriesIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_image.TestOpticalSeriesIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_image.TestOpticalSeriesIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_append (integration.hdf5.test_io.TestAppend.test_append) ... test_electrode_id_uniqueness (integration.hdf5.test_io.TestAppend.test_electrode_id_uniqueness) ... test_gzip_timestamps (integration.hdf5.test_io.TestH5DataIO.test_gzip_timestamps) ... test_write_dataset_custom_chunks (integration.hdf5.test_io.TestH5DataIO.test_write_dataset_custom_chunks) ... test_write_dataset_custom_compress (integration.hdf5.test_io.TestH5DataIO.test_write_dataset_custom_compress) ... test_write_dataset_custom_fillvalue (integration.hdf5.test_io.TestH5DataIO.test_write_dataset_custom_fillvalue) ... test_write_dataset_datachunkiterator_data_and_time (integration.hdf5.test_io.TestH5DataIO.test_write_dataset_datachunkiterator_data_and_time) ... test_write_dataset_datachunkiterator_data_only (integration.hdf5.test_io.TestH5DataIO.test_write_dataset_datachunkiterator_data_only) ... test_write_dataset_datachunkiterator_with_compression (integration.hdf5.test_io.TestH5DataIO.test_write_dataset_datachunkiterator_with_compression) ... test_file_creation_io_modes (integration.hdf5.test_io.TestHDF5Writer.test_file_creation_io_modes) ... test_nwbio (integration.hdf5.test_io.TestHDF5Writer.test_nwbio) ... test_write_cache_spec (integration.hdf5.test_io.TestHDF5Writer.test_write_cache_spec) Round-trip test for writing spec and reading it back in ... test_write_clobber (integration.hdf5.test_io.TestHDF5Writer.test_write_clobber) ... test_write_no_cache_spec (integration.hdf5.test_io.TestHDF5Writer.test_write_no_cache_spec) Round-trip test for not writing spec ... test_nwbio (integration.hdf5.test_io.TestHDF5WriterWithInjectedFile.test_nwbio) ... test_write_cache_spec (integration.hdf5.test_io.TestHDF5WriterWithInjectedFile.test_write_cache_spec) Round-trip test for writing spec and reading it back in ... test_write_clobber (integration.hdf5.test_io.TestHDF5WriterWithInjectedFile.test_write_clobber) ... test_check_nwb_version_missing_version (integration.hdf5.test_io.TestNWBHDF5IO.test_check_nwb_version_missing_version) Test reading of files with missing nwb_version ... test_check_nwb_version_ok (integration.hdf5.test_io.TestNWBHDF5IO.test_check_nwb_version_ok) Test that opening a current NWBFile passes the version check ... test_check_nwb_version_old_version (integration.hdf5.test_io.TestNWBHDF5IO.test_check_nwb_version_old_version) Test reading of files with version less than 2 ... test_nwb_version_property (integration.hdf5.test_io.TestNWBHDF5IO.test_nwb_version_property) Test reading of files with missing nwb_version ... test_round_trip_with_path_string (integration.hdf5.test_io.TestNWBHDF5IO.test_round_trip_with_path_string) Opening a NWBHDF5IO with a path string should work correctly ... test_round_trip_with_pathlib_path (integration.hdf5.test_io.TestNWBHDF5IO.test_round_trip_with_pathlib_path) Opening a NWBHDF5IO with a pathlib path should correctly ... test_roundtrip (integration.hdf5.test_misc.TestDecompositionSeriesIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_misc.TestDecompositionSeriesIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_eg_ref (integration.hdf5.test_misc.TestDecompositionSeriesWithSourceChannelsIO.test_eg_ref) Test that the electrode DynamicTableRegion references of the read ElectricalSeries have a group that ... test_roundtrip (integration.hdf5.test_misc.TestDecompositionSeriesWithSourceChannelsIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_misc.TestDecompositionSeriesWithSourceChannelsIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_misc.TestUnitsFileIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_misc.TestUnitsFileIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_to_dataframe (integration.hdf5.test_misc.TestUnitsFileIO.test_to_dataframe) ... test_get_obs_intervals (integration.hdf5.test_misc.TestUnitsIO.test_get_obs_intervals) Test whether the Units observation intervals read from file are what was written ... test_get_spike_times (integration.hdf5.test_misc.TestUnitsIO.test_get_spike_times) Test whether the Units spike times read from file are what was written ... test_roundtrip (integration.hdf5.test_misc.TestUnitsIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_misc.TestUnitsIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_link_root (integration.hdf5.test_modular_storage.TestTimeSeriesModular.test_link_root) ... test_roundtrip (integration.hdf5.test_modular_storage.TestTimeSeriesModular.test_roundtrip) ... test_link_root (integration.hdf5.test_modular_storage.TestTimeSeriesModularLinkViaTimeSeries.test_link_root) ... skipped 'This behavior is currently broken. See issue .' test_roundtrip (integration.hdf5.test_modular_storage.TestTimeSeriesModularLinkViaTimeSeries.test_roundtrip) ... skipped 'This behavior is currently broken. See issue .' test_roundtrip (integration.hdf5.test_nwbfile.TestAddStimulusTemplateImages.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestAddStimulusTemplateImages.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestAddStimulusTemplateTimeSeries.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestAddStimulusTemplateTimeSeries.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestDynamicTableFromDataframeIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestDynamicTableFromDataframeIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_to_dataframe (integration.hdf5.test_nwbfile.TestDynamicTableFromDataframeIO.test_to_dataframe) ... test_roundtrip (integration.hdf5.test_nwbfile.TestElectrodes.test_roundtrip) ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestElectrodes.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestElectrodesOptColumns.test_roundtrip) ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestElectrodesOptColumns.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestElectrodesRegion.test_roundtrip) ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestElectrodesRegion.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestEmptySubjectIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestEmptySubjectIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestEpochsIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestEpochsIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_df_comparison (integration.hdf5.test_nwbfile.TestEpochsIODf.test_df_comparison) Test that the epochs read from file converted to a data frame are the same as the data frame converted ... test_df_comparison_no_ts (integration.hdf5.test_nwbfile.TestEpochsIODf.test_df_comparison_no_ts) Test that the epochs read from file converted to a data frame are the same as the data frame converted ... test_roundtrip (integration.hdf5.test_nwbfile.TestEpochsIODf.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestEpochsIODf.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestExperimentersConstructorRoundtrip.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestExperimentersConstructorRoundtrip.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestExperimentersSetterRoundtrip.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestExperimentersSetterRoundtrip.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestInvalidTimes.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestInvalidTimes.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_children (integration.hdf5.test_nwbfile.TestNWBFileHDF5IO.test_children) Test that the TimeSeries and processing module are children of their respective parents ... test_read (integration.hdf5.test_nwbfile.TestNWBFileHDF5IO.test_read) Test reading the NWBFile using HDF5IO ... test_write (integration.hdf5.test_nwbfile.TestNWBFileHDF5IO.test_write) Test writing the NWBFile using HDF5IO ... test_roundtrip (integration.hdf5.test_nwbfile.TestNWBFileIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestNWBFileIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestNWBFileNoTimeRoundTrip.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestNWBFileNoTimeRoundTrip.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestNWBFileNoTimezoneRoundTrip.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestNWBFileNoTimezoneRoundTrip.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestPublicationsConstructorRoundtrip.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestPublicationsConstructorRoundtrip.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestPublicationsSetterRoundtrip.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestPublicationsSetterRoundtrip.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestSubjectAgeReferenceNotSetIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestSubjectAgeReferenceNotSetIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestSubjectDOBNoDateSetIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestSubjectDOBNoDateSetIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestSubjectIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestSubjectIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestSubjectMinimalSetIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestSubjectMinimalSetIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestTrials.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestTrials.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_nwbfile.TestUnits.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_nwbfile.TestUnits.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ogen.TestOptogeneticSeriesIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ogen.TestOptogeneticSeriesIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ogen.TestOptogeneticStimulusSiteIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ogen.TestOptogeneticStimulusSiteIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ophys.MaskIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ophys.MaskIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ophys.TestCorrectedImageStackIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ophys.TestCorrectedImageStackIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ophys.TestImageMaskIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ophys.TestImageMaskIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ophys.TestImagingPlaneIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ophys.TestImagingPlaneIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ophys.TestMotionCorrection.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ophys.TestMotionCorrection.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ophys.TestOnePhotonSeriesIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ophys.TestOnePhotonSeriesIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ophys.TestPixelMaskIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ophys.TestPixelMaskIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ophys.TestPlaneSegmentationIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ophys.TestPlaneSegmentationIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ophys.TestRoiResponseSeriesIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ophys.TestRoiResponseSeriesIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_ophys.TestTwoPhotonSeriesIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_ophys.TestTwoPhotonSeriesIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_roundtrip (integration.hdf5.test_scratch.TestScratchDataIO.test_roundtrip) Test whether the read Container has the same contents as the original Container and validate the file. ... test_roundtrip_export (integration.hdf5.test_scratch.TestScratchDataIO.test_roundtrip_export) Test whether the test Container read from an exported file has the same contents as the original test Container ... test_scratch_container (integration.hdf5.test_scratch.TestScratchDataIO.test_scratch_container) ... test_scratch_convert_DataFrame_table_desc (integration.hdf5.test_scratch.TestScratchDataIO.test_scratch_convert_DataFrame_table_desc) Test round trip convert of DataFrame with a table description ... test_scratch_convert_int (integration.hdf5.test_scratch.TestScratchDataIO.test_scratch_convert_int) ... test_scratch_convert_list (integration.hdf5.test_scratch.TestScratchDataIO.test_scratch_convert_list) ... test_scratch_convert_ndarray (integration.hdf5.test_scratch.TestScratchDataIO.test_scratch_convert_ndarray) ... ---------------------------------------------------------------------- Ran 178 tests in 932.675s OK (skipped=2) ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/core.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/core.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/core.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/base.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/base.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/base.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/base.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/ecephys.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/icephys.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/icephys.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/icephys.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/icephys.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/icephys.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/icephys.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/icephys.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/icephys.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/image.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/image.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/image.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/image.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/image.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/ophys.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/ophys.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/ophys.py ====================================================================== 2024-11-06 11:32:50,373 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/ophys.py ====================================================================== 2024-11-06 11:32:50,374 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/misc.py ====================================================================== 2024-11-06 11:32:50,374 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/misc.py ====================================================================== 2024-11-06 11:32:50,374 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/misc.py ====================================================================== 2024-11-06 11:32:50,374 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/file.py ====================================================================== 2024-11-06 11:32:50,374 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/behavior.py ====================================================================== 2024-11-06 11:32:50,374 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/behavior.py ====================================================================== 2024-11-06 11:32:50,374 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/behavior.py ====================================================================== 2024-11-06 11:32:50,374 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/behavior.py ====================================================================== 2024-11-06 11:32:50,374 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/behavior.py ====================================================================== 2024-11-06 11:32:50,374 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/behavior.py ====================================================================== 2024-11-06 11:32:50,374 - INFO - missing test case; should define in /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/lib/python3.13/site-packages/pynwb/behavior.py ====================================================================== 2024-11-06 11:32:50,374 - INFO - 36 classes missing integration tests in ui_write ====================================================================== 2024-11-06 11:32:50,374 - INFO - running integration utils tests test_get_nwb_version (integration.utils.test_io_utils.TestGetNWBVersion.test_get_nwb_version) Get the NWB version from a builder. ... test_get_nwb_version_20b (integration.utils.test_io_utils.TestGetNWBVersion.test_get_nwb_version_20b) Get the NWB version from a builder where version == "2.0b". ... test_get_nwb_version_missing (integration.utils.test_io_utils.TestGetNWBVersion.test_get_nwb_version_missing) Get the NWB version from a builder where the root builder does not have an nwb_version attribute. ... test_get_nwb_version_prerelease_false (integration.utils.test_io_utils.TestGetNWBVersion.test_get_nwb_version_prerelease_false) Get the NWB version from a builder. ... test_get_nwb_version_prerelease_true1 (integration.utils.test_io_utils.TestGetNWBVersion.test_get_nwb_version_prerelease_true1) Get the NWB version from a builder. ... test_get_nwb_version_prerelease_true2 (integration.utils.test_io_utils.TestGetNWBVersion.test_get_nwb_version_prerelease_true2) Get the NWB version from a builder. ... ---------------------------------------------------------------------- Ran 6 tests in 0.001s OK ====================================================================== 2024-11-06 11:32:50,378 - INFO - running pynwb backwards compatibility tests test_outer_import_structure (back_compat.test_import_structure.TestImportStructure.test_outer_import_structure) ... test_read (back_compat.test_read.TestReadOldVersions.test_read) Test reading and validating all NWB files in the same folder as this file. ... test_read_imageseries_no_data (back_compat.test_read.TestReadOldVersions.test_read_imageseries_no_data) Test that an ImageSeries written without data is read with data set to the default value. ... test_read_imageseries_no_unit (back_compat.test_read.TestReadOldVersions.test_read_imageseries_no_unit) Test that an ImageSeries written without unit is read with unit set to the default value. ... test_read_imageseries_non_external_format (back_compat.test_read.TestReadOldVersions.test_read_imageseries_non_external_format) Test that reading an ImageSeries with an inconsistent format does not change the value. ... test_read_imageseries_nonmatch_starting_frame (back_compat.test_read.TestReadOldVersions.test_read_imageseries_nonmatch_starting_frame) Test that reading an ImageSeries with an inconsistent starting_frame does not change the value. ... test_read_subject_no_age__reference (back_compat.test_read.TestReadOldVersions.test_read_subject_no_age__reference) Test that reading a Subject without an age__reference set with NWB schema 2.5.0 sets the value to None ... test_read_timeseries_no_data (back_compat.test_read.TestReadOldVersions.test_read_timeseries_no_data) Test that a TimeSeries written without data is read with data set to the default value. ... test_read_timeseries_no_unit (back_compat.test_read.TestReadOldVersions.test_read_timeseries_no_unit) Test that an ImageSeries written without unit is read with unit set to the default value. ... ---------------------------------------------------------------------- Ran 9 tests in 2.513s OK ====================================================================== 2024-11-06 11:32:52,893 - INFO - Ran 539 tests - OK + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-pynwb-2.7.0-4.fc42.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.iWTuov + umask 022 + cd /builddir/build/BUILD/python-pynwb-2.7.0-build + cd pynwb-2.7.0 + DOCDIR=/builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/share/doc/python3-pynwb + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/share/doc/python3-pynwb + cp -pr /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/README.rst /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/share/doc/python3-pynwb + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.50KJEU + umask 022 + cd /builddir/build/BUILD/python-pynwb-2.7.0-build + cd pynwb-2.7.0 + LICENSEDIR=/builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/share/licenses/python3-pynwb + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/share/licenses/python3-pynwb + cp -pr /builddir/build/BUILD/python-pynwb-2.7.0-build/pynwb-2.7.0/license.txt /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT/usr/share/licenses/python3-pynwb + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-pynwb = 2.7.0-4.fc42 python3-pynwb = 2.7.0-4.fc42 python3.13-pynwb = 2.7.0-4.fc42 python3.13dist(pynwb) = 2.7 python3dist(pynwb) = 2.7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: (python3.13dist(numpy) < 2~~ with python3.13dist(numpy) >= 1.18) python(abi) = 3.13 python3.13dist(h5py) >= 2.10 python3.13dist(hdmf) >= 3.12.2 python3.13dist(pandas) >= 1.1.5 python3.13dist(python-dateutil) >= 2.7.3 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/python-pynwb-2.7.0-build/BUILDROOT Wrote: /builddir/build/SRPMS/python-pynwb-2.7.0-4.fc42.src.rpm Wrote: /builddir/build/RPMS/python3-pynwb-2.7.0-4.fc42.noarch.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.SHVyZW + umask 022 + cd /builddir/build/BUILD/python-pynwb-2.7.0-build + test -d /builddir/build/BUILD/python-pynwb-2.7.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-pynwb-2.7.0-build + rm -rf /builddir/build/BUILD/python-pynwb-2.7.0-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild python-pynwb-2.7.0-4.fc42.src.rpm Finish: build phase for python-pynwb-2.7.0-4.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1730891782.604074/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/python-pynwb-2.7.0-4.fc42.src.rpm) Config(child) 16 minutes 19 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "python-pynwb", "epoch": null, "version": "2.7.0", "release": "4.fc42", "arch": "src" }, { "name": "python3-pynwb", "epoch": null, "version": "2.7.0", "release": "4.fc42", "arch": "noarch" } ] } RPMResults finished