Warning: Permanently added '44.201.12.133' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8977720-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64 Version: 1.3 PID: 13365 Logging PID: 13366 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8977720, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'ebeabb0cd810628697cceaa088177b81d35cadf9', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/thrnciar/python-pip-25.1.0-control/python-bluepyopt', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'python-bluepyopt', 'package_version': '1.14.13-2', 'project_dirname': 'python-pip-25.1.0-control', 'project_name': 'python-pip-25.1.0-control', 'project_owner': 'thrnciar', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/thrnciar/python-pip-25.1.0-control/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'thrnciar/python-pip-25.1.0-control--thrnciar', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 0, 'submitter': 'thrnciar', 'tags': [], 'task_id': '8977720-fedora-rawhide-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/thrnciar/python-pip-25.1.0-control/python-bluepyopt /var/lib/copr-rpmbuild/workspace/workdir-53leklvw/python-bluepyopt --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/thrnciar/python-pip-25.1.0-control/python-bluepyopt', '/var/lib/copr-rpmbuild/workspace/workdir-53leklvw/python-bluepyopt', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-53leklvw/python-bluepyopt'... Running: git checkout ebeabb0cd810628697cceaa088177b81d35cadf9 -- cmd: ['git', 'checkout', 'ebeabb0cd810628697cceaa088177b81d35cadf9', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-53leklvw/python-bluepyopt rc: 0 stdout: stderr: Note: switching to 'ebeabb0cd810628697cceaa088177b81d35cadf9'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at ebeabb0 automatic import of python-bluepyopt Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-53leklvw/python-bluepyopt rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/thrnciar/python-pip-25.1.0-control/python-bluepyopt/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3.tar.gz/md5/f5c212b4f993d6c67b3c7f23185bc1e4/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 28.2M 100 28.2M 0 0 444M 0 --:--:-- --:--:-- --:--:-- 448M INFO: Reading stdout from command: md5sum BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-53leklvw/python-bluepyopt/python-bluepyopt.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-53leklvw/python-bluepyopt --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1745908671.429902 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.1 starting (python version = 3.13.0, NVR = mock-6.1-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-53leklvw/python-bluepyopt/python-bluepyopt.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-53leklvw/python-bluepyopt --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1745908671.429902 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-53leklvw/python-bluepyopt/python-bluepyopt.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 6.1 INFO: Mock Version: 6.1 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1745908671.429902/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Tagging container image as mock-bootstrap-e4c3ffd8-a870-4c82-9b4e-d600f9997a68 INFO: Checking that 8310eb04abc55f0003327d0ce5b95ed16f7c412aa2e1524710f4fcf704ace2ec image matches host's architecture INFO: Copy content of container 8310eb04abc55f0003327d0ce5b95ed16f7c412aa2e1524710f4fcf704ace2ec to /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1745908671.429902/root INFO: mounting 8310eb04abc55f0003327d0ce5b95ed16f7c412aa2e1524710f4fcf704ace2ec with podman image mount INFO: image 8310eb04abc55f0003327d0ce5b95ed16f7c412aa2e1524710f4fcf704ace2ec as /var/lib/containers/storage/overlay/8b69ea3ad37a3ba25e8323a1ad3e2a265e87d4c1e3adf8ee57170ec800caeed2/merged INFO: umounting image 8310eb04abc55f0003327d0ce5b95ed16f7c412aa2e1524710f4fcf704ace2ec (/var/lib/containers/storage/overlay/8b69ea3ad37a3ba25e8323a1ad3e2a265e87d4c1e3adf8ee57170ec800caeed2/merged) with podman image umount INFO: Removing image mock-bootstrap-e4c3ffd8-a870-4c82-9b4e-d600f9997a68 INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1745908671.429902/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-5.99.90-3.fc43.x86_64 rpm-sequoia-1.8.0-1.fc43.x86_64 dnf5-5.2.13.1-1.fc43.x86_64 dnf5-plugins-5.2.13.1-1.fc43.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 85.2 KiB/s | 29.3 KiB | 00m00s Copr repository 100% | 116.1 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.37-3.fc43 fedora 8.2 MiB bzip2 x86_64 1.0.8-20.fc42 fedora 99.3 KiB coreutils x86_64 9.7-1.fc43 fedora 5.4 MiB cpio x86_64 2.15-2.fc41 fedora 1.1 MiB diffutils x86_64 3.12-1.fc43 fedora 1.6 MiB fedora-release-common noarch 43-0.15 fedora 20.4 KiB findutils x86_64 1:4.10.0-5.fc42 fedora 1.9 MiB gawk x86_64 5.3.2-1.fc43 fedora 1.8 MiB glibc-minimal-langpack x86_64 2.41.9000-11.fc43 fedora 0.0 B grep x86_64 3.12-1.fc43 fedora 1.0 MiB gzip x86_64 1.13-3.fc42 fedora 392.9 KiB info x86_64 7.2-3.fc42 fedora 357.9 KiB patch x86_64 2.8-1.fc43 fedora 226.8 KiB redhat-rpm-config noarch 343-4.fc43 fedora 185.6 KiB rpm-build x86_64 5.99.90-3.fc43 fedora 269.5 KiB sed x86_64 4.9-4.fc42 fedora 857.3 KiB shadow-utils x86_64 2:4.17.4-1.fc43 fedora 4.0 MiB tar x86_64 2:1.35-5.fc42 fedora 3.0 MiB unzip x86_64 6.0-66.fc42 fedora 390.3 KiB util-linux x86_64 2.40.4-7.fc43 fedora 3.4 MiB which x86_64 2.23-1.fc42 fedora 83.4 KiB xz x86_64 1:5.8.1-1.fc43 fedora 1.3 MiB Installing dependencies: add-determinism x86_64 0.6.0-1.fc43 fedora 2.5 MiB alternatives x86_64 1.32-1.fc43 fedora 62.2 KiB ansible-srpm-macros noarch 1-17.1.fc42 fedora 35.7 KiB audit-libs x86_64 4.0.3-2.fc42 fedora 351.3 KiB binutils x86_64 2.44-3.fc43 fedora 25.9 MiB build-reproducibility-srpm-macros noarch 0.6.0-1.fc43 fedora 735.0 B bzip2-libs x86_64 1.0.8-20.fc42 fedora 84.6 KiB ca-certificates noarch 2024.2.69_v8.0.401-5.fc42 fedora 2.6 MiB coreutils-common x86_64 9.7-1.fc43 fedora 11.3 MiB crypto-policies noarch 20250402-2.git86c0178.fc43 fedora 141.5 KiB curl x86_64 8.13.0-1.fc43 fedora 461.0 KiB cyrus-sasl-lib x86_64 2.1.28-30.fc42 fedora 2.3 MiB debugedit x86_64 5.1-6.fc43 fedora 192.7 KiB dwz x86_64 0.15-9.fc42 fedora 291.0 KiB ed x86_64 1.21-2.fc42 fedora 146.5 KiB efi-srpm-macros noarch 6-3.fc43 fedora 40.1 KiB elfutils x86_64 0.192-8.fc42 fedora 2.7 MiB elfutils-debuginfod-client x86_64 0.192-8.fc42 fedora 83.9 KiB elfutils-default-yama-scope noarch 0.192-8.fc42 fedora 1.8 KiB elfutils-libelf x86_64 0.192-8.fc42 fedora 1.2 MiB elfutils-libs x86_64 0.192-8.fc42 fedora 675.0 KiB fedora-gpg-keys noarch 43-0.1 fedora 128.2 KiB fedora-release noarch 43-0.15 fedora 0.0 B fedora-release-identity-basic noarch 43-0.15 fedora 664.0 B fedora-repos noarch 43-0.1 fedora 4.9 KiB fedora-repos-rawhide noarch 43-0.1 fedora 2.2 KiB file x86_64 5.46-1.fc42 fedora 100.2 KiB file-libs x86_64 5.46-1.fc42 fedora 11.9 MiB filesystem x86_64 3.18-40.fc43 fedora 112.0 B filesystem-srpm-macros noarch 3.18-40.fc43 fedora 38.2 KiB fonts-srpm-macros noarch 1:2.0.5-21.fc42 fedora 55.8 KiB forge-srpm-macros noarch 0.4.0-2.fc42 fedora 38.9 KiB fpc-srpm-macros noarch 1.3-14.fc42 fedora 144.0 B gdb-minimal x86_64 16.3-1.fc43 fedora 13.2 MiB gdbm-libs x86_64 1:1.23-9.fc42 fedora 129.9 KiB ghc-srpm-macros noarch 1.9.2-2.fc42 fedora 779.0 B glibc x86_64 2.41.9000-11.fc43 fedora 6.7 MiB glibc-common x86_64 2.41.9000-11.fc43 fedora 1.0 MiB glibc-gconv-extra x86_64 2.41.9000-11.fc43 fedora 7.2 MiB gmp x86_64 1:6.3.0-3.fc43 fedora 819.2 KiB gnat-srpm-macros noarch 6-7.fc42 fedora 1.0 KiB gnupg2 x86_64 2.4.7-3.fc43 fedora 9.8 MiB gnutls x86_64 3.8.9-5.fc43 fedora 3.6 MiB go-srpm-macros noarch 3.6.0-7.fc43 fedora 60.8 KiB ima-evm-utils-libs x86_64 1.6.2-5.fc43 fedora 60.7 KiB jansson x86_64 2.14-2.fc42 fedora 93.1 KiB json-c x86_64 0.18-2.fc42 fedora 86.7 KiB kernel-srpm-macros noarch 1.0-25.fc42 fedora 1.9 KiB keyutils-libs x86_64 1.6.3-5.fc42 fedora 58.3 KiB krb5-libs x86_64 1.21.3-5.fc42 fedora 2.3 MiB libacl x86_64 2.3.2-3.fc42 fedora 38.3 KiB libarchive x86_64 3.7.7-4.fc43 fedora 930.6 KiB libassuan x86_64 2.5.7-3.fc42 fedora 167.8 KiB libattr x86_64 2.5.2-5.fc42 fedora 27.1 KiB libblkid x86_64 2.40.4-7.fc43 fedora 262.4 KiB libbrotli x86_64 1.1.0-6.fc42 fedora 841.3 KiB libcap x86_64 2.76-1.fc43 fedora 209.2 KiB libcap-ng x86_64 0.8.5-4.fc42 fedora 72.9 KiB libcom_err x86_64 1.47.2-3.fc42 fedora 67.1 KiB libcurl x86_64 8.13.0-1.fc43 fedora 874.5 KiB libeconf x86_64 0.7.6-1.fc43 fedora 64.6 KiB libevent x86_64 2.1.12-15.fc42 fedora 903.1 KiB libfdisk x86_64 2.40.4-7.fc43 fedora 372.3 KiB libffi x86_64 3.4.7-4.fc43 fedora 82.6 KiB libfsverity x86_64 1.6-2.fc42 fedora 32.5 KiB libgcc x86_64 15.1.1-1.fc43 fedora 266.6 KiB libgcrypt x86_64 1.11.0-5.fc42 fedora 1.6 MiB libgomp x86_64 15.1.1-1.fc43 fedora 538.5 KiB libgpg-error x86_64 1.55-1.fc43 fedora 915.3 KiB libidn2 x86_64 2.3.8-1.fc43 fedora 552.5 KiB libksba x86_64 1.6.7-3.fc42 fedora 402.5 KiB libmount x86_64 2.40.4-7.fc43 fedora 356.2 KiB libnghttp2 x86_64 1.65.0-1.fc43 fedora 162.2 KiB libpkgconf x86_64 2.3.0-2.fc42 fedora 78.1 KiB libpsl x86_64 0.21.5-5.fc42 fedora 76.4 KiB libselinux x86_64 3.8-1.fc42 fedora 193.1 KiB libsemanage x86_64 3.8-1.fc42 fedora 308.4 KiB libsepol x86_64 3.8-1.fc42 fedora 826.0 KiB libsmartcols x86_64 2.40.4-7.fc43 fedora 180.4 KiB libssh x86_64 0.11.1-4.fc42 fedora 565.5 KiB libssh-config noarch 0.11.1-4.fc42 fedora 277.0 B libstdc++ x86_64 15.1.1-1.fc43 fedora 2.8 MiB libtasn1 x86_64 4.20.0-1.fc43 fedora 176.3 KiB libtool-ltdl x86_64 2.5.4-4.fc42 fedora 70.1 KiB libunistring x86_64 1.1-9.fc42 fedora 1.7 MiB libusb1 x86_64 1.0.28-2.fc43 fedora 171.0 KiB libuuid x86_64 2.40.4-7.fc43 fedora 37.3 KiB libverto x86_64 0.3.2-10.fc42 fedora 25.4 KiB libxcrypt x86_64 4.4.38-7.fc43 fedora 284.5 KiB libxml2 x86_64 2.12.10-1.fc43 fedora 1.7 MiB libzstd x86_64 1.5.7-1.fc43 fedora 807.8 KiB lua-libs x86_64 5.4.7-3.fc43 fedora 276.9 KiB lua-srpm-macros noarch 1-15.fc42 fedora 1.3 KiB lz4-libs x86_64 1.10.0-2.fc42 fedora 157.4 KiB mpfr x86_64 4.2.2-1.fc43 fedora 828.8 KiB ncurses-base noarch 6.5-5.20250125.fc42 fedora 326.8 KiB ncurses-libs x86_64 6.5-5.20250125.fc42 fedora 946.3 KiB nettle x86_64 3.10.1-1.fc43 fedora 790.5 KiB npth x86_64 1.8-2.fc42 fedora 49.6 KiB ocaml-srpm-macros noarch 10-4.fc42 fedora 1.9 KiB openblas-srpm-macros noarch 2-19.fc42 fedora 112.0 B openldap x86_64 2.6.9-5.fc43 fedora 655.1 KiB openssl-libs x86_64 1:3.5.0-3.fc43 fedora 8.9 MiB p11-kit x86_64 0.25.5-5.fc42 fedora 2.2 MiB p11-kit-trust x86_64 0.25.5-5.fc42 fedora 395.5 KiB package-notes-srpm-macros noarch 0.5-13.fc42 fedora 1.6 KiB pam-libs x86_64 1.7.0-4.fc42 fedora 126.7 KiB pcre2 x86_64 10.45-1.fc43 fedora 697.7 KiB pcre2-syntax noarch 10.45-1.fc43 fedora 273.9 KiB perl-srpm-macros noarch 1-57.fc42 fedora 861.0 B pkgconf x86_64 2.3.0-2.fc42 fedora 88.5 KiB pkgconf-m4 noarch 2.3.0-2.fc42 fedora 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-2.fc42 fedora 989.0 B popt x86_64 1.19-8.fc42 fedora 132.8 KiB publicsuffix-list-dafsa noarch 20250116-1.fc42 fedora 68.5 KiB pyproject-srpm-macros noarch 1.18.1-1.fc43 fedora 1.9 KiB python-srpm-macros noarch 3.13-5.fc43 fedora 51.7 KiB qt5-srpm-macros noarch 5.15.16-1.fc43 fedora 500.0 B qt6-srpm-macros noarch 6.9.0-2.fc43 fedora 464.0 B readline x86_64 8.2-13.fc43 fedora 485.0 KiB rpm x86_64 5.99.90-3.fc43 fedora 3.1 MiB rpm-build-libs x86_64 5.99.90-3.fc43 fedora 268.4 KiB rpm-libs x86_64 5.99.90-3.fc43 fedora 921.6 KiB rpm-sequoia x86_64 1.8.0-1.fc43 fedora 2.5 MiB rpm-sign-libs x86_64 5.99.90-3.fc43 fedora 39.7 KiB rust-srpm-macros noarch 26.3-4.fc42 fedora 4.8 KiB setup noarch 2.15.0-23.fc43 fedora 724.7 KiB sqlite-libs x86_64 3.49.0-1.fc43 fedora 1.5 MiB systemd-libs x86_64 257.5-2.fc43 fedora 2.2 MiB systemd-standalone-sysusers x86_64 257.5-2.fc43 fedora 277.3 KiB tpm2-tss x86_64 4.1.3-7.fc43 fedora 1.6 MiB tree-sitter-srpm-macros noarch 0.2.4-1.fc43 fedora 7.5 KiB util-linux-core x86_64 2.40.4-7.fc43 fedora 1.4 MiB xxhash-libs x86_64 0.8.3-2.fc42 fedora 90.2 KiB xz-libs x86_64 1:5.8.1-1.fc43 fedora 217.8 KiB zig-srpm-macros noarch 1-4.fc42 fedora 1.1 KiB zip x86_64 3.0-43.fc42 fedora 698.5 KiB zlib-ng-compat x86_64 2.2.4-2.fc43 fedora 137.6 KiB zstd x86_64 1.5.7-1.fc43 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 161 packages Total size of inbound packages is 59 MiB. Need to download 0 B. After this operation, 197 MiB extra will be used (install 197 MiB, remove 0 B). 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Importing OpenPGP key 0x31645531: UserID : "Fedora (43) " Fingerprint: C6E7F081CF80E13146676E88829B606631645531 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary The key was successfully imported. Importing OpenPGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing OpenPGP key 0x6D9F90A6: UserID : "Fedora (44) " Fingerprint: 36F612DCF27F7D1A48A835E4DBFCF71C6D9F90A6 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-44-primary The key was successfully imported. [ 1/163] Verify package files 100% | 1.6 KiB/s | 161.0 B | 00m00s [ 2/163] Prepare transaction 100% | 3.9 KiB/s | 161.0 B | 00m00s [ 3/163] Installing libgcc-0:15.1.1-1. 100% | 262.0 MiB/s | 268.3 KiB | 00m00s [ 4/163] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 5/163] Installing publicsuffix-list- 100% | 0.0 B/s | 69.2 KiB | 00m00s [ 6/163] Installing fedora-release-ide 100% | 0.0 B/s | 920.0 B | 00m00s [ 7/163] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 8/163] Installing fedora-gpg-keys-0: 100% | 42.7 MiB/s | 174.8 KiB | 00m00s [ 9/163] Installing fedora-repos-0:43- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/163] Installing fedora-release-com 100% | 24.1 MiB/s | 24.7 KiB | 00m00s [ 11/163] Installing fedora-release-0:4 100% | 20.2 KiB/s | 124.0 B | 00m00s >>> Running sysusers scriptlet: setup-0:2.15.0-23.fc43.noarch >>> Finished sysusers scriptlet: setup-0:2.15.0-23.fc43.noarch >>> Scriptlet output: >>> Creating group 'adm' with GID 4. >>> Creating group 'audio' with GID 63. >>> Creating group 'cdrom' with GID 11. >>> Creating group 'clock' with GID 103. >>> Creating group 'dialout' with GID 18. >>> Creating group 'disk' with GID 6. >>> Creating group 'floppy' with GID 19. >>> Creating group 'ftp' with GID 50. >>> Creating group 'games' with GID 20. >>> Creating group 'input' with GID 104. >>> Creating group 'kmem' with GID 9. >>> Creating group 'kvm' with GID 36. >>> Creating group 'lock' with GID 54. >>> Creating group 'lp' with GID 7. >>> Creating group 'mail' with GID 12. >>> Creating group 'man' with GID 15. >>> Creating group 'mem' with GID 8. >>> Creating group 'nobody' with GID 65534. >>> Creating group 'render' with GID 105. >>> Creating group 'root' with GID 0. >>> Creating group 'sgx' with GID 106. >>> Creating group 'sys' with GID 3. >>> Creating group 'tape' with GID 33. >>> Creating group 'tty' with GID 5. >>> Creating group 'users' with GID 100. >>> Creating group 'utmp' with GID 22. >>> Creating group 'video' with GID 39. >>> Creating group 'wheel' with GID 10. >>> Creating user 'adm' (adm) with UID 3 and GID 4. >>> Creating group 'bin' with GID 1. >>> Creating user 'bin' (bin) with UID 1 and GID 1. >>> Creating group 'daemon' with GID 2. >>> Creating user 'daemon' (daemon) with UID 2 and GID 2. >>> Creating user 'ftp' (FTP User) with UID 14 and GID 50. >>> Creating user 'games' (games) with UID 12 and GID 100. >>> Creating user 'halt' (halt) with UID 7 and GID 0. >>> Creating user 'lp' (lp) with UID 4 and GID 7. >>> Creating user 'mail' (mail) with UID 8 and GID 12. >>> Creating user 'nobody' (Kernel Overflow User) with UID 65534 and GID 65534. >>> Creating user 'operator' (operator) with UID 11 and GID 0. >>> Creating user 'root' (Super User) with UID 0 and GID 0. >>> Creating user 'shutdown' (shutdown) with UID 6 and GID 0. >>> Creating user 'sync' (sync) with UID 5 and GID 0. >>> [ 12/163] Installing setup-0:2.15.0-23. 100% | 50.9 MiB/s | 730.3 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 13/163] Installing filesystem-0:3.18- 100% | 2.7 MiB/s | 212.4 KiB | 00m00s [ 14/163] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [ 15/163] Installing pcre2-syntax-0:10. 100% | 269.9 MiB/s | 276.4 KiB | 00m00s [ 16/163] Installing ncurses-base-0:6.5 100% | 86.0 MiB/s | 352.2 KiB | 00m00s [ 17/163] Installing bash-0:5.2.37-3.fc 100% | 263.9 MiB/s | 8.2 MiB | 00m00s [ 18/163] Installing glibc-common-0:2.4 100% | 63.8 MiB/s | 1.0 MiB | 00m00s [ 19/163] Installing glibc-gconv-extra- 100% | 292.4 MiB/s | 7.3 MiB | 00m00s [ 20/163] Installing glibc-0:2.41.9000- 100% | 196.2 MiB/s | 6.7 MiB | 00m00s [ 21/163] Installing ncurses-libs-0:6.5 100% | 310.1 MiB/s | 952.8 KiB | 00m00s [ 22/163] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 23/163] Installing zlib-ng-compat-0:2 100% | 135.2 MiB/s | 138.4 KiB | 00m00s [ 24/163] Installing bzip2-libs-0:1.0.8 100% | 83.7 MiB/s | 85.7 KiB | 00m00s [ 25/163] Installing libstdc++-0:15.1.1 100% | 405.2 MiB/s | 2.8 MiB | 00m00s [ 26/163] Installing xz-libs-1:5.8.1-1. 100% | 213.8 MiB/s | 218.9 KiB | 00m00s [ 27/163] Installing gmp-1:6.3.0-3.fc43 100% | 401.1 MiB/s | 821.5 KiB | 00m00s [ 28/163] Installing libuuid-0:2.40.4-7 100% | 0.0 B/s | 38.4 KiB | 00m00s [ 29/163] Installing readline-0:8.2-13. 100% | 237.8 MiB/s | 487.1 KiB | 00m00s [ 30/163] Installing popt-0:1.19-8.fc42 100% | 68.1 MiB/s | 139.4 KiB | 00m00s [ 31/163] Installing libblkid-0:2.40.4- 100% | 257.2 MiB/s | 263.4 KiB | 00m00s [ 32/163] Installing libxcrypt-0:4.4.38 100% | 280.4 MiB/s | 287.2 KiB | 00m00s [ 33/163] Installing libzstd-0:1.5.7-1. 100% | 395.1 MiB/s | 809.1 KiB | 00m00s [ 34/163] Installing elfutils-libelf-0: 100% | 390.1 MiB/s | 1.2 MiB | 00m00s [ 35/163] Installing libgpg-error-0:1.5 100% | 64.3 MiB/s | 921.1 KiB | 00m00s [ 36/163] Installing libattr-0:2.5.2-5. 100% | 0.0 B/s | 28.1 KiB | 00m00s [ 37/163] Installing libacl-0:2.3.2-3.f 100% | 0.0 B/s | 39.2 KiB | 00m00s [ 38/163] Installing libtasn1-0:4.20.0- 100% | 173.9 MiB/s | 178.1 KiB | 00m00s [ 39/163] Installing libunistring-0:1.1 100% | 345.3 MiB/s | 1.7 MiB | 00m00s [ 40/163] Installing libidn2-0:2.3.8-1. 100% | 68.2 MiB/s | 558.7 KiB | 00m00s [ 41/163] Installing crypto-policies-0: 100% | 40.7 MiB/s | 166.6 KiB | 00m00s [ 42/163] Installing dwz-0:0.15-9.fc42. 100% | 22.0 MiB/s | 292.4 KiB | 00m00s [ 43/163] Installing mpfr-0:4.2.2-1.fc4 100% | 270.3 MiB/s | 830.4 KiB | 00m00s [ 44/163] Installing gawk-0:5.3.2-1.fc4 100% | 106.8 MiB/s | 1.8 MiB | 00m00s [ 45/163] Installing unzip-0:6.0-66.fc4 100% | 29.6 MiB/s | 393.8 KiB | 00m00s [ 46/163] Installing file-libs-0:5.46-1 100% | 697.5 MiB/s | 11.9 MiB | 00m00s [ 47/163] Installing file-0:5.46-1.fc42 100% | 8.3 MiB/s | 101.7 KiB | 00m00s [ 48/163] Installing pcre2-0:10.45-1.fc 100% | 341.4 MiB/s | 699.1 KiB | 00m00s [ 49/163] Installing grep-0:3.12-1.fc43 100% | 62.7 MiB/s | 1.0 MiB | 00m00s [ 50/163] Installing xz-1:5.8.1-1.fc43. 100% | 83.2 MiB/s | 1.3 MiB | 00m00s [ 51/163] Installing libeconf-0:0.7.6-1 100% | 64.7 MiB/s | 66.2 KiB | 00m00s [ 52/163] Installing libcap-ng-0:0.8.5- 100% | 73.1 MiB/s | 74.8 KiB | 00m00s [ 53/163] Installing audit-libs-0:4.0.3 100% | 345.1 MiB/s | 353.4 KiB | 00m00s [ 54/163] Installing pam-libs-0:1.7.0-4 100% | 126.1 MiB/s | 129.1 KiB | 00m00s [ 55/163] Installing libcap-0:2.76-1.fc 100% | 16.1 MiB/s | 214.3 KiB | 00m00s [ 56/163] Installing systemd-libs-0:257 100% | 371.3 MiB/s | 2.2 MiB | 00m00s [ 57/163] Installing libsmartcols-0:2.4 100% | 177.3 MiB/s | 181.5 KiB | 00m00s [ 58/163] Installing libsepol-0:3.8-1.f 100% | 403.8 MiB/s | 827.0 KiB | 00m00s [ 59/163] Installing libselinux-0:3.8-1 100% | 189.8 MiB/s | 194.3 KiB | 00m00s [ 60/163] Installing sed-0:4.9-4.fc42.x 100% | 56.3 MiB/s | 865.5 KiB | 00m00s [ 61/163] Installing findutils-1:4.10.0 100% | 117.1 MiB/s | 1.9 MiB | 00m00s [ 62/163] Installing libmount-0:2.40.4- 100% | 349.0 MiB/s | 357.4 KiB | 00m00s [ 63/163] Installing lz4-libs-0:1.10.0- 100% | 154.7 MiB/s | 158.5 KiB | 00m00s [ 64/163] Installing lua-libs-0:5.4.7-3 100% | 271.5 MiB/s | 278.1 KiB | 00m00s [ 65/163] Installing sqlite-libs-0:3.49 100% | 381.0 MiB/s | 1.5 MiB | 00m00s [ 66/163] Installing json-c-0:0.18-2.fc 100% | 85.9 MiB/s | 88.0 KiB | 00m00s [ 67/163] Installing libffi-0:3.4.7-4.f 100% | 82.0 MiB/s | 84.0 KiB | 00m00s [ 68/163] Installing p11-kit-0:0.25.5-5 100% | 115.0 MiB/s | 2.2 MiB | 00m00s [ 69/163] Installing alternatives-0:1.3 100% | 5.2 MiB/s | 63.8 KiB | 00m00s [ 70/163] Installing p11-kit-trust-0:0. 100% | 20.4 MiB/s | 397.2 KiB | 00m00s [ 71/163] Installing zstd-0:1.5.7-1.fc4 100% | 106.9 MiB/s | 1.7 MiB | 00m00s [ 72/163] Installing util-linux-core-0: 100% | 79.3 MiB/s | 1.4 MiB | 00m00s [ 73/163] Installing tar-2:1.35-5.fc42. 100% | 148.1 MiB/s | 3.0 MiB | 00m00s [ 74/163] Installing libsemanage-0:3.8- 100% | 302.9 MiB/s | 310.2 KiB | 00m00s [ 75/163] Installing systemd-standalone 100% | 20.9 MiB/s | 277.9 KiB | 00m00s [ 76/163] Installing libusb1-0:1.0.28-2 100% | 168.7 MiB/s | 172.7 KiB | 00m00s [ 77/163] Installing zip-0:3.0-43.fc42. 100% | 52.8 MiB/s | 702.4 KiB | 00m00s [ 78/163] Installing libpsl-0:0.21.5-5. 100% | 75.7 MiB/s | 77.5 KiB | 00m00s [ 79/163] Installing libassuan-0:2.5.7- 100% | 165.6 MiB/s | 169.6 KiB | 00m00s [ 80/163] Installing libgcrypt-0:1.11.0 100% | 392.3 MiB/s | 1.6 MiB | 00m00s [ 81/163] Installing libksba-0:1.6.7-3. 100% | 197.8 MiB/s | 405.1 KiB | 00m00s [ 82/163] Installing libfdisk-0:2.40.4- 100% | 364.7 MiB/s | 373.5 KiB | 00m00s [ 83/163] Installing nettle-0:3.10.1-1. 100% | 387.5 MiB/s | 793.6 KiB | 00m00s [ 84/163] Installing gnutls-0:3.8.9-5.f 100% | 397.1 MiB/s | 3.6 MiB | 00m00s [ 85/163] Installing libxml2-0:2.12.10- 100% | 106.0 MiB/s | 1.7 MiB | 00m00s [ 86/163] Installing bzip2-0:1.0.8-20.f 100% | 7.8 MiB/s | 103.8 KiB | 00m00s [ 87/163] Installing add-determinism-0: 100% | 137.0 MiB/s | 2.5 MiB | 00m00s [ 88/163] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 89/163] Installing cpio-0:2.15-2.fc41 100% | 73.3 MiB/s | 1.1 MiB | 00m00s [ 90/163] Installing diffutils-0:3.12-1 100% | 97.6 MiB/s | 1.6 MiB | 00m00s [ 91/163] Installing ed-0:1.21-2.fc42.x 100% | 12.1 MiB/s | 148.8 KiB | 00m00s [ 92/163] Installing patch-0:2.8-1.fc43 100% | 18.6 MiB/s | 228.3 KiB | 00m00s [ 93/163] Installing libgomp-0:15.1.1-1 100% | 263.6 MiB/s | 539.9 KiB | 00m00s [ 94/163] Installing npth-0:1.8-2.fc42. 100% | 0.0 B/s | 50.7 KiB | 00m00s [ 95/163] Installing libtool-ltdl-0:2.5 100% | 0.0 B/s | 71.2 KiB | 00m00s [ 96/163] Installing gdbm-libs-1:1.23-9 100% | 128.5 MiB/s | 131.6 KiB | 00m00s [ 97/163] Installing cyrus-sasl-lib-0:2 100% | 135.5 MiB/s | 2.3 MiB | 00m00s [ 98/163] Installing jansson-0:2.14-2.f 100% | 92.2 MiB/s | 94.4 KiB | 00m00s [ 99/163] Installing libpkgconf-0:2.3.0 100% | 77.4 MiB/s | 79.2 KiB | 00m00s [100/163] Installing pkgconf-0:2.3.0-2. 100% | 7.4 MiB/s | 91.0 KiB | 00m00s [101/163] Installing pkgconf-pkg-config 100% | 161.2 KiB/s | 1.8 KiB | 00m00s [102/163] Installing xxhash-libs-0:0.8. 100% | 89.4 MiB/s | 91.6 KiB | 00m00s [103/163] Installing libbrotli-0:1.1.0- 100% | 274.6 MiB/s | 843.6 KiB | 00m00s [104/163] Installing libnghttp2-0:1.65. 100% | 159.5 MiB/s | 163.3 KiB | 00m00s [105/163] Installing keyutils-libs-0:1. 100% | 0.0 B/s | 59.7 KiB | 00m00s [106/163] Installing libcom_err-0:1.47. 100% | 0.0 B/s | 68.2 KiB | 00m00s [107/163] Installing libverto-0:0.3.2-1 100% | 0.0 B/s | 27.2 KiB | 00m00s [108/163] Installing filesystem-srpm-ma 100% | 0.0 B/s | 38.9 KiB | 00m00s [109/163] Installing elfutils-default-y 100% | 408.6 KiB/s | 2.0 KiB | 00m00s [110/163] Installing elfutils-libs-0:0. 100% | 220.3 MiB/s | 676.7 KiB | 00m00s [111/163] Installing coreutils-common-0 100% | 403.3 MiB/s | 11.3 MiB | 00m00s [112/163] Installing openssl-libs-1:3.5 100% | 423.3 MiB/s | 8.9 MiB | 00m00s [113/163] Installing coreutils-0:9.7-1. 100% | 170.1 MiB/s | 5.4 MiB | 00m00s [114/163] Installing ca-certificates-0: 100% | 2.1 MiB/s | 2.4 MiB | 00m01s [115/163] Installing libarchive-0:3.7.7 100% | 227.7 MiB/s | 932.6 KiB | 00m00s [116/163] Installing krb5-libs-0:1.21.3 100% | 164.3 MiB/s | 2.3 MiB | 00m00s >>> Running sysusers scriptlet: tpm2-tss-0:4.1.3-7.fc43.x86_64 >>> Finished sysusers scriptlet: tpm2-tss-0:4.1.3-7.fc43.x86_64 >>> Scriptlet output: >>> Creating group 'tss' with GID 59. >>> Creating user 'tss' (Account used for TPM access) with UID 59 and GID 59. >>> [117/163] Installing tpm2-tss-0:4.1.3-7 100% | 261.3 MiB/s | 1.6 MiB | 00m00s [118/163] Installing ima-evm-utils-libs 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [119/163] Installing libssh-0:0.11.1-4. 100% | 277.1 MiB/s | 567.5 KiB | 00m00s [120/163] Installing gzip-0:1.13-3.fc42 100% | 25.9 MiB/s | 398.4 KiB | 00m00s [121/163] Installing rpm-sequoia-0:1.8. 100% | 357.7 MiB/s | 2.5 MiB | 00m00s [122/163] Installing rpm-libs-0:5.99.90 100% | 300.5 MiB/s | 923.1 KiB | 00m00s [123/163] Installing libfsverity-0:1.6- 100% | 0.0 B/s | 33.5 KiB | 00m00s [124/163] Installing libevent-0:2.1.12- 100% | 295.2 MiB/s | 906.9 KiB | 00m00s [125/163] Installing openldap-0:2.6.9-5 100% | 214.5 MiB/s | 658.9 KiB | 00m00s [126/163] Installing libcurl-0:8.13.0-1 100% | 285.0 MiB/s | 875.6 KiB | 00m00s [127/163] Installing elfutils-debuginfo 100% | 6.5 MiB/s | 86.2 KiB | 00m00s [128/163] Installing elfutils-0:0.192-8 100% | 141.4 MiB/s | 2.7 MiB | 00m00s [129/163] Installing binutils-0:2.44-3. 100% | 340.8 MiB/s | 25.9 MiB | 00m00s [130/163] Installing gdb-minimal-0:16.3 100% | 308.1 MiB/s | 13.2 MiB | 00m00s [131/163] Installing debugedit-0:5.1-6. 100% | 14.7 MiB/s | 195.4 KiB | 00m00s [132/163] Installing curl-0:8.13.0-1.fc 100% | 22.6 MiB/s | 463.5 KiB | 00m00s [133/163] Installing rpm-0:5.99.90-3.fc 100% | 80.9 MiB/s | 2.5 MiB | 00m00s [134/163] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.1 KiB | 00m00s [135/163] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [136/163] Installing tree-sitter-srpm-m 100% | 0.0 B/s | 8.6 KiB | 00m00s [137/163] Installing zig-srpm-macros-0: 100% | 1.6 MiB/s | 1.7 KiB | 00m00s [138/163] Installing gnupg2-0:2.4.7-3.f 100% | 251.1 MiB/s | 9.8 MiB | 00m00s [139/163] Installing rpm-sign-libs-0:5. 100% | 39.6 MiB/s | 40.5 KiB | 00m00s [140/163] Installing rpm-build-libs-0:5 100% | 262.9 MiB/s | 269.2 KiB | 00m00s [141/163] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [142/163] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 740.0 B | 00m00s [143/163] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [144/163] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [145/163] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [146/163] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [147/163] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [148/163] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [149/163] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [150/163] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [151/163] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [152/163] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [153/163] Installing rpm-build-0:5.99.9 100% | 19.4 MiB/s | 278.4 KiB | 00m00s [154/163] Installing pyproject-srpm-mac 100% | 0.0 B/s | 2.5 KiB | 00m00s [155/163] Installing redhat-rpm-config- 100% | 93.9 MiB/s | 192.3 KiB | 00m00s [156/163] Installing forge-srpm-macros- 100% | 39.3 MiB/s | 40.3 KiB | 00m00s [157/163] Installing fonts-srpm-macros- 100% | 0.0 B/s | 57.0 KiB | 00m00s [158/163] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 62.0 KiB | 00m00s [159/163] Installing python-srpm-macros 100% | 0.0 B/s | 53.0 KiB | 00m00s [160/163] Installing which-0:2.23-1.fc4 100% | 6.4 MiB/s | 85.6 KiB | 00m00s [161/163] Installing util-linux-0:2.40. 100% | 104.9 MiB/s | 3.5 MiB | 00m00s [162/163] Installing shadow-utils-2:4.1 100% | 139.8 MiB/s | 4.1 MiB | 00m00s [163/163] Installing info-0:7.2-3.fc42. 100% | 234.3 KiB/s | 358.3 KiB | 00m02s Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.6.0-1.fc43.x86_64 alternatives-1.32-1.fc43.x86_64 ansible-srpm-macros-1-17.1.fc42.noarch audit-libs-4.0.3-2.fc42.x86_64 bash-5.2.37-3.fc43.x86_64 binutils-2.44-3.fc43.x86_64 build-reproducibility-srpm-macros-0.6.0-1.fc43.noarch bzip2-1.0.8-20.fc42.x86_64 bzip2-libs-1.0.8-20.fc42.x86_64 ca-certificates-2024.2.69_v8.0.401-5.fc42.noarch coreutils-9.7-1.fc43.x86_64 coreutils-common-9.7-1.fc43.x86_64 cpio-2.15-2.fc41.x86_64 crypto-policies-20250402-2.git86c0178.fc43.noarch curl-8.13.0-1.fc43.x86_64 cyrus-sasl-lib-2.1.28-30.fc42.x86_64 debugedit-5.1-6.fc43.x86_64 diffutils-3.12-1.fc43.x86_64 dwz-0.15-9.fc42.x86_64 ed-1.21-2.fc42.x86_64 efi-srpm-macros-6-3.fc43.noarch elfutils-0.192-8.fc42.x86_64 elfutils-debuginfod-client-0.192-8.fc42.x86_64 elfutils-default-yama-scope-0.192-8.fc42.noarch elfutils-libelf-0.192-8.fc42.x86_64 elfutils-libs-0.192-8.fc42.x86_64 fedora-gpg-keys-43-0.1.noarch fedora-release-43-0.15.noarch fedora-release-common-43-0.15.noarch fedora-release-identity-basic-43-0.15.noarch fedora-repos-43-0.1.noarch fedora-repos-rawhide-43-0.1.noarch file-5.46-1.fc42.x86_64 file-libs-5.46-1.fc42.x86_64 filesystem-3.18-40.fc43.x86_64 filesystem-srpm-macros-3.18-40.fc43.noarch findutils-4.10.0-5.fc42.x86_64 fonts-srpm-macros-2.0.5-21.fc42.noarch forge-srpm-macros-0.4.0-2.fc42.noarch fpc-srpm-macros-1.3-14.fc42.noarch gawk-5.3.2-1.fc43.x86_64 gdb-minimal-16.3-1.fc43.x86_64 gdbm-libs-1.23-9.fc42.x86_64 ghc-srpm-macros-1.9.2-2.fc42.noarch glibc-2.41.9000-11.fc43.x86_64 glibc-common-2.41.9000-11.fc43.x86_64 glibc-gconv-extra-2.41.9000-11.fc43.x86_64 glibc-minimal-langpack-2.41.9000-11.fc43.x86_64 gmp-6.3.0-3.fc43.x86_64 gnat-srpm-macros-6-7.fc42.noarch gnupg2-2.4.7-3.fc43.x86_64 gnutls-3.8.9-5.fc43.x86_64 go-srpm-macros-3.6.0-7.fc43.noarch gpg-pubkey-36f612dcf27f7d1a48a835e4dbfcf71c6d9f90a6-6786af3b gpg-pubkey-b0f4950458f69e1150c6c5edc8ac4916105ef944-65ca83d1 gpg-pubkey-c6e7f081cf80e13146676e88829b606631645531-66b6dccf grep-3.12-1.fc43.x86_64 gzip-1.13-3.fc42.x86_64 ima-evm-utils-libs-1.6.2-5.fc43.x86_64 info-7.2-3.fc42.x86_64 jansson-2.14-2.fc42.x86_64 json-c-0.18-2.fc42.x86_64 kernel-srpm-macros-1.0-25.fc42.noarch keyutils-libs-1.6.3-5.fc42.x86_64 krb5-libs-1.21.3-5.fc42.x86_64 libacl-2.3.2-3.fc42.x86_64 libarchive-3.7.7-4.fc43.x86_64 libassuan-2.5.7-3.fc42.x86_64 libattr-2.5.2-5.fc42.x86_64 libblkid-2.40.4-7.fc43.x86_64 libbrotli-1.1.0-6.fc42.x86_64 libcap-2.76-1.fc43.x86_64 libcap-ng-0.8.5-4.fc42.x86_64 libcom_err-1.47.2-3.fc42.x86_64 libcurl-8.13.0-1.fc43.x86_64 libeconf-0.7.6-1.fc43.x86_64 libevent-2.1.12-15.fc42.x86_64 libfdisk-2.40.4-7.fc43.x86_64 libffi-3.4.7-4.fc43.x86_64 libfsverity-1.6-2.fc42.x86_64 libgcc-15.1.1-1.fc43.x86_64 libgcrypt-1.11.0-5.fc42.x86_64 libgomp-15.1.1-1.fc43.x86_64 libgpg-error-1.55-1.fc43.x86_64 libidn2-2.3.8-1.fc43.x86_64 libksba-1.6.7-3.fc42.x86_64 libmount-2.40.4-7.fc43.x86_64 libnghttp2-1.65.0-1.fc43.x86_64 libpkgconf-2.3.0-2.fc42.x86_64 libpsl-0.21.5-5.fc42.x86_64 libselinux-3.8-1.fc42.x86_64 libsemanage-3.8-1.fc42.x86_64 libsepol-3.8-1.fc42.x86_64 libsmartcols-2.40.4-7.fc43.x86_64 libssh-0.11.1-4.fc42.x86_64 libssh-config-0.11.1-4.fc42.noarch libstdc++-15.1.1-1.fc43.x86_64 libtasn1-4.20.0-1.fc43.x86_64 libtool-ltdl-2.5.4-4.fc42.x86_64 libunistring-1.1-9.fc42.x86_64 libusb1-1.0.28-2.fc43.x86_64 libuuid-2.40.4-7.fc43.x86_64 libverto-0.3.2-10.fc42.x86_64 libxcrypt-4.4.38-7.fc43.x86_64 libxml2-2.12.10-1.fc43.x86_64 libzstd-1.5.7-1.fc43.x86_64 lua-libs-5.4.7-3.fc43.x86_64 lua-srpm-macros-1-15.fc42.noarch lz4-libs-1.10.0-2.fc42.x86_64 mpfr-4.2.2-1.fc43.x86_64 ncurses-base-6.5-5.20250125.fc42.noarch ncurses-libs-6.5-5.20250125.fc42.x86_64 nettle-3.10.1-1.fc43.x86_64 npth-1.8-2.fc42.x86_64 ocaml-srpm-macros-10-4.fc42.noarch openblas-srpm-macros-2-19.fc42.noarch openldap-2.6.9-5.fc43.x86_64 openssl-libs-3.5.0-3.fc43.x86_64 p11-kit-0.25.5-5.fc42.x86_64 p11-kit-trust-0.25.5-5.fc42.x86_64 package-notes-srpm-macros-0.5-13.fc42.noarch pam-libs-1.7.0-4.fc42.x86_64 patch-2.8-1.fc43.x86_64 pcre2-10.45-1.fc43.x86_64 pcre2-syntax-10.45-1.fc43.noarch perl-srpm-macros-1-57.fc42.noarch pkgconf-2.3.0-2.fc42.x86_64 pkgconf-m4-2.3.0-2.fc42.noarch pkgconf-pkg-config-2.3.0-2.fc42.x86_64 popt-1.19-8.fc42.x86_64 publicsuffix-list-dafsa-20250116-1.fc42.noarch pyproject-srpm-macros-1.18.1-1.fc43.noarch python-srpm-macros-3.13-5.fc43.noarch qt5-srpm-macros-5.15.16-1.fc43.noarch qt6-srpm-macros-6.9.0-2.fc43.noarch readline-8.2-13.fc43.x86_64 redhat-rpm-config-343-4.fc43.noarch rpm-5.99.90-3.fc43.x86_64 rpm-build-5.99.90-3.fc43.x86_64 rpm-build-libs-5.99.90-3.fc43.x86_64 rpm-libs-5.99.90-3.fc43.x86_64 rpm-sequoia-1.8.0-1.fc43.x86_64 rpm-sign-libs-5.99.90-3.fc43.x86_64 rust-srpm-macros-26.3-4.fc42.noarch sed-4.9-4.fc42.x86_64 setup-2.15.0-23.fc43.noarch shadow-utils-4.17.4-1.fc43.x86_64 sqlite-libs-3.49.0-1.fc43.x86_64 systemd-libs-257.5-2.fc43.x86_64 systemd-standalone-sysusers-257.5-2.fc43.x86_64 tar-1.35-5.fc42.x86_64 tpm2-tss-4.1.3-7.fc43.x86_64 tree-sitter-srpm-macros-0.2.4-1.fc43.noarch unzip-6.0-66.fc42.x86_64 util-linux-2.40.4-7.fc43.x86_64 util-linux-core-2.40.4-7.fc43.x86_64 which-2.23-1.fc42.x86_64 xxhash-libs-0.8.3-2.fc42.x86_64 xz-5.8.1-1.fc43.x86_64 xz-libs-5.8.1-1.fc43.x86_64 zig-srpm-macros-1-4.fc42.noarch zip-3.0-43.fc42.x86_64 zlib-ng-compat-2.2.4-2.fc43.x86_64 zstd-1.5.7-1.fc43.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1737158400 Wrote: /builddir/build/SRPMS/python-bluepyopt-1.14.13-2.fc43.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1745908671.429902/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-53leklvw/python-bluepyopt/python-bluepyopt.spec) Config(child) 0 minutes 11 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/python-bluepyopt-1.14.13-2.fc43.src.rpm) Config(fedora-rawhide-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1745908671.429902/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1745908671.429902/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1745908671.429902/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-5.99.90-3.fc43.x86_64 rpm-sequoia-1.8.0-1.fc43.x86_64 dnf5-5.2.13.1-1.fc43.x86_64 dnf5-plugins-5.2.13.1-1.fc43.x86_64 Finish: chroot init Start: build phase for python-bluepyopt-1.14.13-2.fc43.src.rpm Start: build setup for python-bluepyopt-1.14.13-2.fc43.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1737158400 Wrote: /builddir/build/SRPMS/python-bluepyopt-1.14.13-2.fc43.src.rpm Updating and loading repositories: fedora 100% | 88.2 KiB/s | 29.3 KiB | 00m00s Copr repository 100% | 79.4 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: arbor x86_64 0.9.0-12.fc42 fedora 6.2 MiB gcc-c++ x86_64 15.1.1-1.fc43 fedora 41.3 MiB libX11-devel x86_64 1.8.11-1.fc42 fedora 1.0 MiB libXext-devel x86_64 1.3.6-3.fc42 fedora 98.9 KiB neuron-devel x86_64 8.2.6-2.fc43 fedora 469.9 KiB python3-devel x86_64 3.13.3-2.fc43 fedora 1.8 MiB python3-jupyter-client noarch 8.6.1-11.fc42 fedora 893.8 KiB python3-lfpy x86_64 2.3.2-5.fc42 fedora 1.8 MiB python3-matplotlib x86_64 3.10.0-3.fc42 fedora 22.3 MiB python3-meautility noarch 1.5.2-2.fc43 fedora 348.0 KiB python3-nbconvert noarch 7.16.4-7.fc43 fedora 1.2 MiB python3-neuron x86_64 8.2.6-2.fc43 fedora 6.3 MiB python3-papermill noarch 2.6.0-6.fc42 fedora 283.9 KiB python3-pytest noarch 8.3.5-2.fc43 fedora 21.0 MiB Installing dependencies: Lmod x86_64 8.7.58-1.fc43 fedora 1.3 MiB abattis-cantarell-vf-fonts noarch 0.301-14.fc42 fedora 192.7 KiB annobin-docs noarch 12.93-1.fc43 fedora 98.9 KiB annobin-plugin-gcc x86_64 12.93-1.fc43 fedora 993.4 KiB autoconf noarch 2.72-5.fc43 fedora 2.8 MiB automake noarch 1.17-2.fc42 fedora 1.8 MiB cairo x86_64 1.18.2-3.fc42 fedora 1.8 MiB cmake-filesystem x86_64 3.31.6-2.fc43 fedora 0.0 B cpp x86_64 15.1.1-1.fc43 fedora 37.8 MiB default-fonts-core-sans noarch 4.2-4.fc42 fedora 11.9 KiB dejavu-sans-fonts noarch 2.37-25.fc42 fedora 5.5 MiB emacs-filesystem noarch 1:30.0-4.fc42 fedora 0.0 B expat x86_64 2.7.1-1.fc43 fedora 294.2 KiB flexiblas x86_64 3.4.5-1.fc43 fedora 50.4 KiB flexiblas-netlib x86_64 3.4.5-1.fc43 fedora 10.9 MiB flexiblas-openblas-openmp x86_64 3.4.5-1.fc43 fedora 39.2 KiB fontconfig x86_64 2.16.2-1.fc43 fedora 760.8 KiB fonts-filesystem noarch 1:2.0.5-21.fc42 fedora 0.0 B freetype x86_64 2.13.3-2.fc42 fedora 858.2 KiB fribidi x86_64 1.0.16-2.fc42 fedora 194.3 KiB gcc x86_64 15.1.1-1.fc43 fedora 111.0 MiB gcc-plugin-annobin x86_64 15.1.1-1.fc43 fedora 57.2 KiB glib2 x86_64 2.84.1-1.fc43 fedora 14.7 MiB glibc-devel x86_64 2.41.9000-11.fc43 fedora 2.3 MiB google-noto-fonts-common noarch 20250401-1.fc43 fedora 17.7 KiB google-noto-sans-vf-fonts noarch 20250401-1.fc43 fedora 1.4 MiB graphite2 x86_64 1.3.14-18.fc42 fedora 195.8 KiB groff-base x86_64 1.23.0-8.fc42 fedora 3.9 MiB harfbuzz x86_64 11.1.0-1.fc43 fedora 2.8 MiB hdf5 x86_64 1.14.6-3.fc43 fedora 6.4 MiB hwloc-libs x86_64 2.12.0-1.fc43 fedora 2.9 MiB iv x86_64 0.1-0.13.20250212git17d8a70.fc43 fedora 4.0 MiB iv-devel x86_64 0.1-0.13.20250212git17d8a70.fc43 fedora 1.1 MiB jbigkit-libs x86_64 2.1-31.fc42 fedora 121.4 KiB kernel-headers x86_64 6.15.0-0.rc2.22.fc43 fedora 6.6 MiB lcms2 x86_64 2.16-5.fc42 fedora 437.7 KiB libICE x86_64 1.1.2-2.fc42 fedora 198.4 KiB libSM x86_64 1.2.5-2.fc42 fedora 105.0 KiB libX11 x86_64 1.8.11-1.fc42 fedora 1.3 MiB libX11-common noarch 1.8.11-1.fc42 fedora 1.2 MiB libX11-xcb x86_64 1.8.11-1.fc42 fedora 10.9 KiB libXau x86_64 1.0.12-2.fc42 fedora 76.9 KiB libXau-devel x86_64 1.0.12-2.fc42 fedora 7.5 KiB libXext x86_64 1.3.6-3.fc42 fedora 90.0 KiB libXrender x86_64 0.9.12-2.fc42 fedora 50.0 KiB libXt x86_64 1.3.1-2.fc42 fedora 429.7 KiB libaec x86_64 1.1.3-2.fc42 fedora 97.9 KiB libb2 x86_64 0.98.1-13.fc42 fedora 46.1 KiB libcbor x86_64 0.11.0-3.fc42 fedora 77.8 KiB libedit x86_64 3.1-55.20250104cvs.fc42 fedora 244.1 KiB libfabric x86_64 2.1.0-1.fc43 fedora 5.4 MiB libfido2 x86_64 1.15.0-3.fc42 fedora 242.1 KiB libgfortran x86_64 15.1.1-1.fc43 fedora 3.3 MiB libibverbs x86_64 57.0-2.fc43 fedora 1.2 MiB libimagequant x86_64 4.0.3-7.fc42 fedora 704.3 KiB libjpeg-turbo x86_64 3.1.0-2.fc42 fedora 803.2 KiB liblerc x86_64 4.0.0-8.fc42 fedora 636.1 KiB liblzf x86_64 3.6-32.fc42 fedora 49.5 KiB libmpc x86_64 1.3.1-7.fc42 fedora 164.5 KiB libnl3 x86_64 3.11.0-3.fc42 fedora 1.0 MiB libpng x86_64 2:1.6.47-1.fc43 fedora 237.7 KiB libpsm2 x86_64 12.0.1-2.fc42 fedora 442.3 KiB libqhull_r x86_64 1:8.0.2-6.fc42 fedora 483.3 KiB libquadmath x86_64 15.1.1-1.fc43 fedora 317.9 KiB libraqm x86_64 0.10.1-2.fc42 fedora 28.6 KiB librdmacm x86_64 57.0-2.fc43 fedora 142.0 KiB libsodium x86_64 1.0.20-5.fc43 fedora 389.1 KiB libstdc++-devel x86_64 15.1.1-1.fc43 fedora 16.1 MiB libtiff x86_64 4.7.0-3.fc42 fedora 619.1 KiB libtommath x86_64 1.3.1~rc1-5.fc42 fedora 130.4 KiB libtool x86_64 2.5.4-4.fc42 fedora 2.7 MiB libunwind x86_64 1.8.1-2.fc43 fedora 194.1 KiB libwebp x86_64 1.5.0-2.fc42 fedora 947.6 KiB libxcb x86_64 1.17.0-5.fc42 fedora 1.1 MiB libxcb-devel x86_64 1.17.0-5.fc42 fedora 2.7 MiB libxcrypt-devel x86_64 4.4.38-7.fc43 fedora 30.8 KiB libxslt x86_64 1.1.43-1.fc43 fedora 456.1 KiB libyaml x86_64 0.2.5-16.fc42 fedora 134.7 KiB llhttp x86_64 9.2.1-5.fc42 fedora 76.5 KiB lua x86_64 5.4.7-3.fc43 fedora 602.2 KiB lua-filesystem x86_64 1.8.0-14.fc42 fedora 64.8 KiB lua-json noarch 1.3.4-9.fc42 fedora 59.4 KiB lua-lpeg x86_64 1.1.0-5.fc42 fedora 181.4 KiB lua-posix x86_64 36.2.1-8.fc42 fedora 553.0 KiB lua-term x86_64 0.08-5.fc42 fedora 22.8 KiB m4 x86_64 1.4.19-12.fc43 fedora 588.7 KiB make x86_64 1:4.4.1-10.fc42 fedora 1.8 MiB mpdecimal x86_64 4.0.0-2.fc43 fedora 216.8 KiB mpi4py-common noarch 4.0.3-1.fc43 fedora 28.9 KiB mpich x86_64 4.2.2-4.fc43 fedora 7.1 MiB munge-libs x86_64 0.5.16-5.fc43 fedora 28.0 KiB ncurses x86_64 6.5-5.20250125.fc42 fedora 608.1 KiB ncurses-c++-libs x86_64 6.5-5.20250125.fc42 fedora 153.6 KiB ncurses-devel x86_64 6.5-5.20250125.fc42 fedora 883.7 KiB neuron x86_64 8.2.6-2.fc43 fedora 5.1 MiB numactl-libs x86_64 2.0.19-2.fc42 fedora 52.9 KiB openblas x86_64 0.3.29-1.fc42 fedora 111.7 KiB openblas-openmp x86_64 0.3.29-1.fc42 fedora 43.7 MiB openjpeg x86_64 2.5.3-6.fc42 fedora 451.8 KiB openmpi x86_64 5.0.6-5.fc43 fedora 7.0 MiB openpgm x86_64 5.3.128-4.fc42 fedora 316.3 KiB openssh x86_64 9.9p1-15.fc43 fedora 1.4 MiB openssh-clients x86_64 9.9p1-15.fc43 fedora 2.6 MiB orangefs x86_64 2.9.8-14.fc42 fedora 3.1 MiB perl-AutoLoader noarch 5.74-517.fc43 fedora 20.5 KiB perl-B x86_64 1.89-517.fc43 fedora 498.0 KiB perl-Carp noarch 1.54-512.fc42 fedora 46.6 KiB perl-Class-Struct noarch 0.68-517.fc43 fedora 25.4 KiB perl-Data-Dumper x86_64 2.189-513.fc42 fedora 115.6 KiB perl-Digest noarch 1.20-512.fc42 fedora 35.3 KiB perl-Digest-MD5 x86_64 2.59-6.fc42 fedora 59.7 KiB perl-DynaLoader x86_64 1.56-517.fc43 fedora 32.1 KiB perl-Encode x86_64 4:3.21-512.fc42 fedora 4.7 MiB perl-Errno x86_64 1.38-517.fc43 fedora 8.3 KiB perl-Exporter noarch 5.78-512.fc42 fedora 54.3 KiB perl-Fcntl x86_64 1.18-517.fc43 fedora 48.9 KiB perl-File-Basename noarch 2.86-517.fc43 fedora 14.0 KiB perl-File-Compare noarch 1.100.800-517.fc43 fedora 5.6 KiB perl-File-Copy noarch 2.41-517.fc43 fedora 19.6 KiB perl-File-Find noarch 1.44-517.fc43 fedora 41.9 KiB perl-File-Path noarch 2.18-512.fc42 fedora 63.5 KiB perl-File-Temp noarch 1:0.231.100-512.fc42 fedora 162.3 KiB perl-File-stat noarch 1.14-517.fc43 fedora 12.5 KiB perl-FileHandle noarch 2.05-517.fc43 fedora 9.3 KiB perl-Getopt-Long noarch 1:2.58-3.fc42 fedora 144.5 KiB perl-Getopt-Std noarch 1.14-517.fc43 fedora 11.2 KiB perl-HTTP-Tiny noarch 0.090-2.fc42 fedora 154.4 KiB perl-IO x86_64 1.55-517.fc43 fedora 147.0 KiB perl-IO-Socket-IP noarch 0.43-2.fc42 fedora 100.3 KiB perl-IO-Socket-SSL noarch 2.089-2.fc42 fedora 703.3 KiB perl-IPC-Open3 noarch 1.22-517.fc43 fedora 22.5 KiB perl-MIME-Base32 noarch 1.303-23.fc42 fedora 30.7 KiB perl-MIME-Base64 x86_64 3.16-512.fc42 fedora 42.0 KiB perl-Net-SSLeay x86_64 1.94-9.fc43 fedora 1.3 MiB perl-POSIX x86_64 2.20-517.fc43 fedora 231.0 KiB perl-PathTools x86_64 3.91-513.fc42 fedora 180.0 KiB perl-Pod-Escapes noarch 1:1.07-512.fc42 fedora 24.9 KiB perl-Pod-Perldoc noarch 3.28.01-513.fc42 fedora 163.7 KiB perl-Pod-Simple noarch 1:3.45-512.fc42 fedora 560.8 KiB perl-Pod-Usage noarch 4:2.05-1.fc43 fedora 86.3 KiB perl-Scalar-List-Utils x86_64 5:1.69-1.fc43 fedora 144.8 KiB perl-SelectSaver noarch 1.02-517.fc43 fedora 2.2 KiB perl-Socket x86_64 4:2.038-512.fc42 fedora 119.9 KiB perl-Storable x86_64 1:3.32-512.fc42 fedora 232.3 KiB perl-Symbol noarch 1.09-517.fc43 fedora 6.8 KiB perl-Term-ANSIColor noarch 5.01-513.fc42 fedora 97.5 KiB perl-Term-Cap noarch 1.18-512.fc42 fedora 29.3 KiB perl-Text-ParseWords noarch 3.31-512.fc42 fedora 13.6 KiB perl-Text-Tabs+Wrap noarch 2024.001-512.fc42 fedora 22.6 KiB perl-Thread-Queue noarch 3.14-512.fc42 fedora 28.9 KiB perl-Time-Local noarch 2:1.350-512.fc42 fedora 68.9 KiB perl-URI noarch 5.31-2.fc42 fedora 257.0 KiB perl-base noarch 2.27-517.fc43 fedora 12.5 KiB perl-constant noarch 1.33-513.fc42 fedora 26.2 KiB perl-if noarch 0.61.000-517.fc43 fedora 5.8 KiB perl-interpreter x86_64 4:5.40.2-517.fc43 fedora 118.3 KiB perl-libnet noarch 3.15-513.fc42 fedora 289.4 KiB perl-libs x86_64 4:5.40.2-517.fc43 fedora 9.8 MiB perl-locale noarch 1.12-517.fc43 fedora 6.5 KiB perl-mro x86_64 1.29-517.fc43 fedora 41.5 KiB perl-overload noarch 1.37-517.fc43 fedora 71.5 KiB perl-overloading noarch 0.02-517.fc43 fedora 4.8 KiB perl-parent noarch 1:0.244-2.fc42 fedora 10.3 KiB perl-podlators noarch 1:6.0.2-3.fc42 fedora 317.5 KiB perl-threads x86_64 1:2.40-512.fc42 fedora 115.0 KiB perl-threads-shared x86_64 1.69-512.fc42 fedora 83.6 KiB perl-vars noarch 1.05-517.fc43 fedora 3.9 KiB pixman x86_64 0.44.2-2.fc42 fedora 674.2 KiB pmix x86_64 5.0.7-1.fc43 fedora 2.2 MiB procps-ng x86_64 4.0.4-6.fc42 fedora 1.0 MiB prrte x86_64 3.0.6-7.fc43 fedora 158.3 KiB prrte-libs x86_64 3.0.6-7.fc43 fedora 1.7 MiB pugixml x86_64 1.14-2.fc42 fedora 266.7 KiB pyproject-rpm-macros noarch 1.18.1-1.fc43 fedora 114.5 KiB python-pip-wheel noarch 25.0.1-3.fc43 fedora 1.3 MiB python-rpm-macros noarch 3.13-5.fc43 fedora 22.1 KiB python3 x86_64 3.13.3-2.fc43 fedora 28.7 KiB python3-aiohappyeyeballs noarch 2.6.1-1.fc43 fedora 97.8 KiB python3-aiohttp x86_64 3.11.16-1.fc43 fedora 3.5 MiB python3-aiosignal noarch 1.3.2-2.fc42 fedora 33.4 KiB python3-ansicolors noarch 1.1.8-28.fc42 fedora 45.1 KiB python3-attrs noarch 25.3.0-1.fc43 fedora 402.5 KiB python3-beautifulsoup4 noarch 4.13.4-1.fc43 fedora 1.9 MiB python3-bleach noarch 6.2.0-3.fc42 fedora 187.5 KiB python3-cached_property noarch 2.0.1-2.fc42 fedora 34.8 KiB python3-cairo x86_64 1.25.1-6.fc42 fedora 492.5 KiB python3-charset-normalizer noarch 3.4.1-3.fc42 fedora 319.6 KiB python3-click noarch 8.1.7-7.fc42 fedora 1.0 MiB python3-contourpy x86_64 1.3.2-1.fc43 fedora 838.8 KiB python3-cycler noarch 0.11.0-15.fc42 fedora 37.2 KiB python3-cython x86_64 3.0.12-1.fc43 fedora 18.5 MiB python3-dateutil noarch 1:2.8.2-17.fc42 fedora 876.2 KiB python3-defusedxml noarch 0.7.1-18.fc42 fedora 196.4 KiB python3-entrypoints noarch 0.4-8.fc42 fedora 132.1 KiB python3-fastjsonschema noarch 2.21.1-2.fc42 fedora 189.1 KiB python3-fonttools x86_64 4.57.0-1.fc43 fedora 18.2 MiB python3-frozenlist x86_64 1.6.0-1.fc43 fedora 652.9 KiB python3-h5py x86_64 3.12.1-6.fc43 fedora 4.4 MiB python3-html5lib noarch 1:1.1-27.fc42 fedora 1.5 MiB python3-idna noarch 3.10-2.fc42 fedora 628.0 KiB python3-iniconfig noarch 1.1.1-25.fc42 fedora 20.6 KiB python3-jinja2 noarch 3.1.6-1.fc43 fedora 2.9 MiB python3-jsonschema noarch 4.23.0-2.fc42 fedora 886.2 KiB python3-jsonschema-specifications noarch 2024.10.1-2.fc42 fedora 46.2 KiB python3-jupyter-core noarch 5.7.2-8.fc42 fedora 196.8 KiB python3-jupyterlab_pygments noarch 0.3.0-8.fc42 fedora 62.0 KiB python3-kiwisolver x86_64 1.4.8-2.fc42 fedora 149.7 KiB python3-lfpykit noarch 0.5.1-6.fc42 fedora 877.6 KiB python3-libs x86_64 3.13.3-2.fc43 fedora 39.9 MiB python3-lxml x86_64 5.3.2-1.fc43 fedora 5.1 MiB python3-markupsafe x86_64 3.0.2-2.fc42 fedora 55.8 KiB python3-matplotlib-data noarch 3.10.0-3.fc42 fedora 742.7 KiB python3-matplotlib-data-fonts noarch 3.10.0-3.fc42 fedora 7.9 MiB python3-mistune noarch 3.1.3-1.fc43 fedora 441.2 KiB python3-mpi4py-mpich x86_64 4.0.3-1.fc43 fedora 3.2 MiB python3-mpi4py-openmpi x86_64 4.0.3-1.fc43 fedora 3.2 MiB python3-mpich x86_64 4.2.2-4.fc43 fedora 99.0 B python3-multidict x86_64 6.3.0-1.fc43 fedora 192.4 KiB python3-nbclient noarch 0.10.2-2.fc42 fedora 217.7 KiB python3-nbformat noarch 5.10.4-1.fc43 fedora 549.7 KiB python3-numpy x86_64 1:2.2.5-1.fc43 fedora 40.3 MiB python3-numpy-f2py x86_64 1:2.2.5-1.fc43 fedora 2.0 MiB python3-olefile noarch 0.47-6.fc42 fedora 339.5 KiB python3-openmpi x86_64 5.0.6-5.fc43 fedora 99.0 B python3-packaging noarch 24.2-3.fc42 fedora 555.7 KiB python3-pandocfilters noarch 1.5.1-6.fc42 fedora 38.6 KiB python3-pillow x86_64 11.2.1-1.fc43 fedora 4.0 MiB python3-platformdirs noarch 4.2.2-4.fc42 fedora 162.0 KiB python3-pluggy noarch 1.5.0-2.fc42 fedora 192.7 KiB python3-pooch noarch 1.8.2-5.fc42 fedora 620.8 KiB python3-propcache x86_64 0.2.0-1.fc43 fedora 128.5 KiB python3-pygments noarch 2.19.1-1.fc43 fedora 10.8 MiB python3-pyparsing noarch 3.1.2-8.fc42 fedora 996.4 KiB python3-pyyaml x86_64 6.0.2-2.fc42 fedora 781.0 KiB python3-pyzmq x86_64 26.4.0-3.fc43 fedora 1.2 MiB python3-referencing noarch 0.36.2-1.fc42 fedora 320.9 KiB python3-requests noarch 2.32.3-12.fc43 fedora 483.4 KiB python3-rpds-py x86_64 0.23.1-1.fc43 fedora 758.3 KiB python3-rpm-generators noarch 14-12.fc42 fedora 81.7 KiB python3-rpm-macros noarch 3.13-5.fc43 fedora 6.4 KiB python3-scipy x86_64 1.14.1-3.fc42 fedora 67.2 MiB python3-setuptools noarch 78.1.0-1.fc43 fedora 8.6 MiB python3-six noarch 1.17.0-2.fc42 fedora 116.9 KiB python3-soupsieve noarch 2.6-5.fc42 fedora 291.9 KiB python3-tenacity noarch 8.2.3-6.fc42 fedora 156.6 KiB python3-tinycss2 noarch 1.4.0-2.fc42 fedora 250.8 KiB python3-tornado x86_64 6.4.2-1.fc43 fedora 5.0 MiB python3-tqdm noarch 4.67.1-3.fc42 fedora 566.9 KiB python3-traitlets noarch 5.14.3-4.fc42 fedora 954.6 KiB python3-typing-extensions noarch 4.13.2-1.fc43 fedora 566.7 KiB python3-urllib3 noarch 2.4.0-1.fc43 fedora 1.0 MiB python3-webencodings noarch 0.5.1-28.fc42 fedora 85.7 KiB python3-yarl x86_64 1.18.3-1.fc43 fedora 511.8 KiB readline-devel x86_64 8.2-13.fc43 fedora 552.9 KiB tcl x86_64 1:9.0.0-8.fc43 fedora 4.3 MiB tcsh x86_64 6.24.14-2.fc42 fedora 1.2 MiB tzdata noarch 2025b-1.fc43 fedora 1.6 MiB ucx x86_64 1.17.0-4.fc43 fedora 2.3 MiB xml-common noarch 0.6.3-66.fc42 fedora 78.4 KiB xorg-x11-proto-devel noarch 2024.1-4.fc42 fedora 1.7 MiB yaksa x86_64 0.3-7.fc42 fedora 43.8 MiB zeromq x86_64 4.3.5-21.fc42 fedora 890.1 KiB Transaction Summary: Installing: 276 packages Total size of inbound packages is 220 MiB. Need to download 208 MiB. After this operation, 804 MiB extra will be used (install 804 MiB, remove 0 B). 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MiB/s | 220.4 KiB | 00m00s [241/276] fribidi-0:1.0.16-2.fc42.x86_6 100% | 17.4 MiB/s | 53.6 KiB | 00m00s [242/276] openjpeg-0:2.5.3-6.fc42.x86_6 100% | 37.7 MiB/s | 192.8 KiB | 00m00s [243/276] python3-olefile-0:0.47-6.fc42 100% | 18.2 MiB/s | 74.6 KiB | 00m00s [244/276] jbigkit-libs-0:2.1-31.fc42.x8 100% | 17.4 MiB/s | 53.3 KiB | 00m00s [245/276] perl-Getopt-Std-0:1.14-517.fc 100% | 7.8 MiB/s | 15.9 KiB | 00m00s [246/276] perl-Encode-4:3.21-512.fc42.x 100% | 175.4 MiB/s | 1.1 MiB | 00m00s [247/276] liblerc-0:4.0.0-8.fc42.x86_64 100% | 30.2 MiB/s | 216.7 KiB | 00m00s [248/276] perl-Storable-1:3.32-512.fc42 100% | 48.6 MiB/s | 99.6 KiB | 00m00s [249/276] cmake-filesystem-0:3.31.6-2.f 100% | 17.0 MiB/s | 17.4 KiB | 00m00s [250/276] iv-devel-0:0.1-0.13.20250212g 100% | 77.6 MiB/s | 238.4 KiB | 00m00s [251/276] ncurses-c++-libs-0:6.5-5.2025 100% | 12.3 MiB/s | 37.9 KiB | 00m00s [252/276] ncurses-devel-0:6.5-5.2025012 100% | 114.0 MiB/s | 583.5 KiB | 00m00s [253/276] openblas-0:0.3.29-1.fc42.x86_ 100% | 5.2 MiB/s | 42.3 KiB | 00m00s [254/276] readline-devel-0:8.2-13.fc43. 100% | 50.5 MiB/s | 206.8 KiB | 00m00s [255/276] libXt-0:1.3.1-2.fc42.x86_64 100% | 59.0 MiB/s | 181.3 KiB | 00m00s [256/276] libxcb-devel-0:1.17.0-5.fc42. 100% | 205.3 MiB/s | 1.4 MiB | 00m00s [257/276] libICE-0:1.1.2-2.fc42.x86_64 100% | 19.2 MiB/s | 78.8 KiB | 00m00s [258/276] libSM-0:1.2.5-2.fc42.x86_64 100% | 14.5 MiB/s | 44.4 KiB | 00m00s [259/276] libxcrypt-devel-0:4.4.38-7.fc 100% | 28.7 MiB/s | 29.4 KiB | 00m00s [260/276] glibc-devel-0:2.41.9000-11.fc 100% | 134.1 MiB/s | 549.1 KiB | 00m00s [261/276] libXau-devel-0:1.0.12-2.fc42. 100% | 6.8 MiB/s | 14.0 KiB | 00m00s [262/276] Lmod-0:8.7.58-1.fc43.x86_64 100% | 53.1 MiB/s | 271.9 KiB | 00m00s [263/276] libstdc++-devel-0:15.1.1-1.fc 100% | 204.1 MiB/s | 2.9 MiB | 00m00s [264/276] kernel-headers-0:6.15.0-0.rc2 100% | 151.4 MiB/s | 1.7 MiB | 00m00s [265/276] lua-filesystem-0:1.8.0-14.fc4 100% | 6.6 MiB/s | 33.9 KiB | 00m00s [266/276] lua-json-0:1.3.4-9.fc42.noarc 100% | 12.8 MiB/s | 26.1 KiB | 00m00s [267/276] lua-term-0:0.08-5.fc42.x86_64 100% | 7.8 MiB/s | 15.9 KiB | 00m00s [268/276] lua-posix-0:36.2.1-8.fc42.x86 100% | 27.3 MiB/s | 140.0 KiB | 00m00s [269/276] lua-lpeg-0:1.1.0-5.fc42.x86_6 100% | 17.4 MiB/s | 71.3 KiB | 00m00s [270/276] lua-0:5.4.7-3.fc43.x86_64 100% | 38.7 MiB/s | 198.0 KiB | 00m00s [271/276] procps-ng-0:4.0.4-6.fc42.x86_ 100% | 118.9 MiB/s | 365.3 KiB | 00m00s [272/276] tcl-1:9.0.0-8.fc43.x86_64 100% | 206.3 MiB/s | 1.2 MiB | 00m00s [273/276] libtommath-0:1.3.1~rc1-5.fc42 100% | 15.7 MiB/s | 64.4 KiB | 00m00s [274/276] annobin-docs-0:12.93-1.fc43.n 100% | 44.9 MiB/s | 92.0 KiB | 00m00s [275/276] gcc-plugin-annobin-0:15.1.1-1 100% | 24.7 MiB/s | 50.7 KiB | 00m00s [276/276] annobin-plugin-gcc-0:12.93-1. 100% | 106.7 MiB/s | 983.3 KiB | 00m00s -------------------------------------------------------------------------------- [276/276] Total 100% | 171.8 MiB/s | 208.0 MiB | 00m01s Running transaction [ 1/278] Verify package files 100% | 857.0 B/s | 276.0 B | 00m00s [ 2/278] Prepare transaction 100% | 1.8 KiB/s | 276.0 B | 00m00s [ 3/278] Installing libgfortran-0:15.1 100% | 331.2 MiB/s | 3.3 MiB | 00m00s [ 4/278] Installing hwloc-libs-0:2.12. 100% | 411.8 MiB/s | 2.9 MiB | 00m00s [ 5/278] Installing fonts-filesystem-1 100% | 0.0 B/s | 788.0 B | 00m00s [ 6/278] Installing python-rpm-macros- 100% | 0.0 B/s | 22.8 KiB | 00m00s [ 7/278] Installing libnl3-0:3.11.0-3. 100% | 255.9 MiB/s | 1.0 MiB | 00m00s [ 8/278] Installing libibverbs-0:57.0- 100% | 195.6 MiB/s | 1.2 MiB | 00m00s [ 9/278] Installing xorg-x11-proto-dev 100% | 254.7 MiB/s | 1.8 MiB | 00m00s [ 10/278] Installing libmpc-0:1.3.1-7.f 100% | 162.2 MiB/s | 166.1 KiB | 00m00s [ 11/278] Installing python3-rpm-macros 100% | 0.0 B/s | 6.7 KiB | 00m00s [ 12/278] Installing lua-0:5.4.7-3.fc43 100% | 39.4 MiB/s | 605.2 KiB | 00m00s [ 13/278] Installing libICE-0:1.1.2-2.f 100% | 195.1 MiB/s | 199.8 KiB | 00m00s [ 14/278] Installing libwebp-0:1.5.0-2. 100% | 309.8 MiB/s | 951.8 KiB | 00m00s [ 15/278] Installing libjpeg-turbo-0:3. 100% | 393.0 MiB/s | 804.9 KiB | 00m00s [ 16/278] Installing numactl-libs-0:2.0 100% | 0.0 B/s | 53.8 KiB | 00m00s [ 17/278] Installing libpsm2-0:12.0.1-2 100% | 216.5 MiB/s | 443.4 KiB | 00m00s [ 18/278] Installing libXau-0:1.0.12-2. 100% | 76.6 MiB/s | 78.5 KiB | 00m00s [ 19/278] Installing libxcb-0:1.17.0-5. 100% | 216.1 MiB/s | 1.1 MiB | 00m00s [ 20/278] Installing libquadmath-0:15.1 100% | 311.7 MiB/s | 319.2 KiB | 00m00s [ 21/278] Installing libpng-2:1.6.47-1. 100% | 233.4 MiB/s | 239.0 KiB | 00m00s [ 22/278] Installing mpi4py-common-0:4. 100% | 7.3 MiB/s | 29.9 KiB | 00m00s [ 23/278] Installing tzdata-0:2025b-1.f 100% | 59.1 MiB/s | 1.9 MiB | 00m00s [ 24/278] Installing libXau-devel-0:1.0 100% | 1.5 MiB/s | 9.4 KiB | 00m00s [ 25/278] Installing libxcb-devel-0:1.1 100% | 71.3 MiB/s | 3.1 MiB | 00m00s [ 26/278] Installing libSM-0:1.2.5-2.fc 100% | 103.9 MiB/s | 106.4 KiB | 00m00s [ 27/278] Installing lua-term-0:0.08-5. 100% | 24.3 MiB/s | 24.8 KiB | 00m00s [ 28/278] Installing pyproject-rpm-macr 100% | 113.7 MiB/s | 116.4 KiB | 00m00s [ 29/278] Installing cpp-0:15.1.1-1.fc4 100% | 344.0 MiB/s | 37.8 MiB | 00m00s [ 30/278] Installing librdmacm-0:57.0-2 100% | 140.6 MiB/s | 144.0 KiB | 00m00s [ 31/278] Installing libfabric-0:2.1.0- 100% | 225.2 MiB/s | 5.4 MiB | 00m00s [ 32/278] Installing dejavu-sans-fonts- 100% | 459.1 MiB/s | 5.5 MiB | 00m00s [ 33/278] Installing abattis-cantarell- 100% | 189.9 MiB/s | 194.4 KiB | 00m00s [ 34/278] Installing python3-matplotlib 100% | 185.6 MiB/s | 760.1 KiB | 00m00s [ 35/278] Installing python3-matplotlib 100% | 416.4 MiB/s | 7.9 MiB | 00m00s [ 36/278] Installing annobin-docs-0:12. 100% | 97.7 MiB/s | 100.0 KiB | 00m00s [ 37/278] Installing libtommath-0:1.3.1 100% | 128.4 MiB/s | 131.5 KiB | 00m00s [ 38/278] Installing tcl-1:9.0.0-8.fc43 100% | 166.7 MiB/s | 4.3 MiB | 00m00s [ 39/278] Installing procps-ng-0:4.0.4- 100% | 63.2 MiB/s | 1.0 MiB | 00m00s [ 40/278] Installing lua-lpeg-0:1.1.0-5 100% | 178.9 MiB/s | 183.2 KiB | 00m00s [ 41/278] Installing lua-json-0:1.3.4-9 100% | 61.7 MiB/s | 63.2 KiB | 00m00s [ 42/278] Installing lua-posix-0:36.2.1 100% | 138.8 MiB/s | 568.3 KiB | 00m00s [ 43/278] Installing lua-filesystem-0:1 100% | 65.4 MiB/s | 67.0 KiB | 00m00s [ 44/278] Installing Lmod-0:8.7.58-1.fc 100% | 89.6 MiB/s | 1.3 MiB | 00m00s [ 45/278] Installing kernel-headers-0:6 100% | 192.1 MiB/s | 6.7 MiB | 00m00s [ 46/278] Installing glibc-devel-0:2.41 100% | 179.9 MiB/s | 2.3 MiB | 00m00s [ 47/278] Installing libxcrypt-devel-0: 100% | 16.2 MiB/s | 33.1 KiB | 00m00s [ 48/278] Installing libstdc++-devel-0: 100% | 385.9 MiB/s | 16.2 MiB | 00m00s [ 49/278] Installing ncurses-c++-libs-0 100% | 75.6 MiB/s | 154.8 KiB | 00m00s [ 50/278] Installing ncurses-devel-0:6. 100% | 36.0 MiB/s | 1.0 MiB | 00m00s [ 51/278] Installing readline-devel-0:8 100% | 273.7 MiB/s | 560.5 KiB | 00m00s [ 52/278] Installing cmake-filesystem-0 100% | 7.4 MiB/s | 7.6 KiB | 00m00s [ 53/278] Installing openblas-0:0.3.29- 100% | 110.8 MiB/s | 113.5 KiB | 00m00s [ 54/278] Installing openblas-openmp-0: 100% | 633.6 MiB/s | 43.7 MiB | 00m00s [ 55/278] Installing flexiblas-netlib-0 100% | 287.8 MiB/s | 10.9 MiB | 00m00s [ 56/278] Installing flexiblas-0:3.4.5- 100% | 50.4 MiB/s | 51.6 KiB | 00m00s [ 57/278] Installing flexiblas-openblas 100% | 39.1 MiB/s | 40.1 KiB | 00m00s [ 58/278] Installing liblerc-0:4.0.0-8. 100% | 311.3 MiB/s | 637.6 KiB | 00m00s [ 59/278] Installing jbigkit-libs-0:2.1 100% | 120.5 MiB/s | 123.4 KiB | 00m00s [ 60/278] Installing libtiff-0:4.7.0-3. 100% | 303.4 MiB/s | 621.3 KiB | 00m00s [ 61/278] Installing fribidi-0:1.0.16-2 100% | 14.8 MiB/s | 196.8 KiB | 00m00s [ 62/278] Installing openjpeg-0:2.5.3-6 100% | 221.6 MiB/s | 453.8 KiB | 00m00s [ 63/278] Installing libimagequant-0:4. 100% | 344.7 MiB/s | 705.9 KiB | 00m00s [ 64/278] Installing lcms2-0:2.16-5.fc4 100% | 214.5 MiB/s | 439.3 KiB | 00m00s [ 65/278] Installing google-noto-fonts- 100% | 0.0 B/s | 18.5 KiB | 00m00s [ 66/278] Installing google-noto-sans-v 100% | 347.8 MiB/s | 1.4 MiB | 00m00s [ 67/278] Installing default-fonts-core 100% | 3.6 MiB/s | 18.2 KiB | 00m00s [ 68/278] Installing xml-common-0:0.6.3 100% | 79.2 MiB/s | 81.1 KiB | 00m00s [ 69/278] Installing pixman-0:0.44.2-2. 100% | 329.7 MiB/s | 675.3 KiB | 00m00s [ 70/278] Installing ncurses-0:6.5-5.20 100% | 27.3 MiB/s | 614.7 KiB | 00m00s [ 71/278] Installing groff-base-0:1.23. 100% | 118.0 MiB/s | 3.9 MiB | 00m00s [ 72/278] Installing perl-Digest-0:1.20 100% | 36.2 MiB/s | 37.1 KiB | 00m00s [ 73/278] Installing perl-Digest-MD5-0: 100% | 60.1 MiB/s | 61.6 KiB | 00m00s [ 74/278] Installing perl-FileHandle-0: 100% | 0.0 B/s | 9.8 KiB | 00m00s [ 75/278] Installing perl-B-0:1.89-517. 100% | 244.8 MiB/s | 501.3 KiB | 00m00s [ 76/278] Installing perl-libnet-0:3.15 100% | 143.9 MiB/s | 294.7 KiB | 00m00s [ 77/278] Installing perl-MIME-Base32-0 100% | 0.0 B/s | 32.2 KiB | 00m00s [ 78/278] Installing perl-Data-Dumper-0 100% | 114.7 MiB/s | 117.5 KiB | 00m00s [ 79/278] Installing perl-URI-0:5.31-2. 100% | 87.8 MiB/s | 269.6 KiB | 00m00s [ 80/278] Installing perl-AutoLoader-0: 100% | 0.0 B/s | 20.9 KiB | 00m00s [ 81/278] Installing perl-IO-Socket-IP- 100% | 99.8 MiB/s | 102.2 KiB | 00m00s [ 82/278] Installing perl-IO-Socket-SSL 100% | 345.4 MiB/s | 707.4 KiB | 00m00s [ 83/278] Installing perl-Net-SSLeay-0: 100% | 271.7 MiB/s | 1.4 MiB | 00m00s [ 84/278] Installing perl-Text-Tabs+Wra 100% | 0.0 B/s | 23.9 KiB | 00m00s [ 85/278] Installing perl-Pod-Escapes-1 100% | 0.0 B/s | 25.9 KiB | 00m00s [ 86/278] Installing perl-Time-Local-2: 100% | 68.9 MiB/s | 70.6 KiB | 00m00s [ 87/278] Installing perl-if-0:0.61.000 100% | 0.0 B/s | 6.2 KiB | 00m00s [ 88/278] Installing perl-File-Path-0:2 100% | 0.0 B/s | 64.5 KiB | 00m00s [ 89/278] Installing perl-locale-0:1.12 100% | 0.0 B/s | 6.9 KiB | 00m00s [ 90/278] Installing perl-HTTP-Tiny-0:0 100% | 152.8 MiB/s | 156.4 KiB | 00m00s [ 91/278] Installing perl-Pod-Simple-1: 100% | 278.5 MiB/s | 570.4 KiB | 00m00s [ 92/278] Installing perl-Term-Cap-0:1. 100% | 0.0 B/s | 30.6 KiB | 00m00s [ 93/278] Installing perl-Term-ANSIColo 100% | 96.9 MiB/s | 99.2 KiB | 00m00s [ 94/278] Installing perl-IPC-Open3-0:1 100% | 0.0 B/s | 23.3 KiB | 00m00s [ 95/278] Installing perl-File-Temp-1:0 100% | 160.2 MiB/s | 164.1 KiB | 00m00s [ 96/278] Installing perl-POSIX-0:2.20- 100% | 226.9 MiB/s | 232.3 KiB | 00m00s [ 97/278] Installing perl-Class-Struct- 100% | 0.0 B/s | 25.9 KiB | 00m00s [ 98/278] Installing perl-Pod-Perldoc-0 100% | 11.8 MiB/s | 169.2 KiB | 00m00s [ 99/278] Installing perl-podlators-1:6 100% | 24.1 MiB/s | 321.4 KiB | 00m00s [100/278] Installing perl-File-stat-0:1 100% | 0.0 B/s | 13.1 KiB | 00m00s [101/278] Installing perl-Socket-4:2.03 100% | 119.1 MiB/s | 122.0 KiB | 00m00s [102/278] Installing perl-SelectSaver-0 100% | 0.0 B/s | 2.6 KiB | 00m00s [103/278] Installing perl-Symbol-0:1.09 100% | 0.0 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Finish: build setup for python-bluepyopt-1.14.13-2.fc43.src.rpm Start: rpmbuild python-bluepyopt-1.14.13-2.fc43.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1737158400 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.WtqMB8 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.AS81DC + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.13-build + cd /builddir/build/BUILD/python-bluepyopt-1.14.13-build + rm -rf BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + cp -v /builddir/build/SOURCES/_version.py bluepyopt/_version.py '/builddir/build/SOURCES/_version.py' -> 'bluepyopt/_version.py' + sed -i '/scoop/ d' setup.py + sed -i 's/^\(.*:.*\)jupyter$/\1/' Makefile + sed -i 's/python l5pc_validate_neuron_arbor_pm.py/python3 l5pc_validate_neuron_arbor_pm.py/g' Makefile + rm -f bluepyopt/tests/test_neuroml_fcts.py + find examples/ -name .gitignore -delete + find examples/ -name dummy.inc -delete + find examples/ -type f -name '*.py' -exec sed -i 's|^#![ ]*/usr/bin/env.*$|#!/usr/bin/python3/|' '{}' ';' + find examples/ -type f -name '*.py' -exec chmod -x '{}' ';' + find examples/ -type f -name '*.mod' -exec sed -i 's/\r$//' '{}' ';' + find examples/ -type f -name '*.asc' -exec sed -i 's/\r$//' '{}' ';' + find examples/ -type f -name '*.csv' -exec sed -i 's/\r$//' '{}' ';' ++ grep '^MODSUBDIR' /usr/bin/nrnivmodl ++ cut -d = -f2 + export MODSUBDIR=x86_64 + MODSUBDIR=x86_64 + sed -i s/x86_64/x86_64/ Makefile + sed -i s/x86_64/x86_64/ bluepyopt/tests/test_l5pc.py + sed -i s/x86_64/x86_64/ bluepyopt/tests/test_stochkv.py + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.pacA2V + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.13-build + cd BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir + RPM_TOXENV=py313 + FEDORA=43 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/pyproject-wheeldir --output /builddir/build/BUILD/python-bluepyopt-1.14.13-build/python-bluepyopt-1.14.13-2.fc43.x86_64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 78.1.0) /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/versioneer.py:575: SyntaxWarning: invalid escape sequence '\s' mo = re.search(r'=\s*"(.*)"', line) Warning: 'keywords' should be a list, got type 'tuple' /usr/lib/python3.13/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running egg_info creating bluepyopt.egg-info writing bluepyopt.egg-info/PKG-INFO writing dependency_links to bluepyopt.egg-info/dependency_links.txt writing entry points to bluepyopt.egg-info/entry_points.txt writing requirements to bluepyopt.egg-info/requires.txt writing top-level names to bluepyopt.egg-info/top_level.txt writing manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file 'bluepyopt.egg-info/SOURCES.txt' /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/versioneer.py:575: SyntaxWarning: invalid escape sequence '\s' mo = re.search(r'=\s*"(.*)"', line) Warning: 'keywords' should be a list, got type 'tuple' running dist_info writing bluepyopt.egg-info/PKG-INFO writing dependency_links to bluepyopt.egg-info/dependency_links.txt writing entry points to bluepyopt.egg-info/entry_points.txt writing requirements to bluepyopt.egg-info/requires.txt writing top-level names to bluepyopt.egg-info/top_level.txt reading manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file 'bluepyopt.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt-1.14.13.dist-info' Handling numpy>=1.6 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: numpy>=1.6 (installed: numpy 2.2.5) Handling pandas>=0.18 from hook generated metadata: Requires-Dist (bluepyopt) Requirement not satisfied: pandas>=0.18 Handling deap>=1.3.3 from hook generated metadata: Requires-Dist (bluepyopt) Requirement not satisfied: deap>=1.3.3 Handling efel>=2.13 from hook generated metadata: Requires-Dist (bluepyopt) Requirement not satisfied: efel>=2.13 Handling ipyparallel from hook generated metadata: Requires-Dist (bluepyopt) Requirement not satisfied: ipyparallel Handling pickleshare>=0.7.3 from hook generated metadata: Requires-Dist (bluepyopt) Requirement not satisfied: pickleshare>=0.7.3 Handling Jinja2>=2.8 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: Jinja2>=2.8 (installed: Jinja2 3.1.6) Handling Pebble>=4.6.0 from hook generated metadata: Requires-Dist (bluepyopt) Requirement not satisfied: Pebble>=4.6.0 Handling NEURON>=7.8 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: NEURON>=7.8 (installed: NEURON 8.2.6) Handling pyneuroml>=0.5.20; extra == "all" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml>=0.5.20; extra == "all" Handling libNeuroML>=0.3.1; extra == "all" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML>=0.3.1; extra == "all" Handling LFPy>=2.3; extra == "all" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy>=2.3; extra == "all" Handling arbor>=0.7; extra == "all" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor>=0.7; extra == "all" Handling pyneuroml>=0.5.20; extra == "tests" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml>=0.5.20; extra == "tests" Handling libNeuroML>=0.3.1; extra == "tests" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML>=0.3.1; extra == "tests" Handling LFPy>=2.3; extra == "tests" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy>=2.3; extra == "tests" Handling arbor>=0.7; extra == "tests" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor>=0.7; extra == "tests" Handling pyneuroml>=0.5.20; extra == "neuroml" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml>=0.5.20; extra == "neuroml" Handling libNeuroML>=0.3.1; extra == "neuroml" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML>=0.3.1; extra == "neuroml" Handling LFPy>=2.3; extra == "lfpy" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy>=2.3; extra == "lfpy" Handling arbor>=0.7; extra == "arbor" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor>=0.7; extra == "arbor" + cat /builddir/build/BUILD/python-bluepyopt-1.14.13-build/python-bluepyopt-1.14.13-2.fc43.x86_64-pyproject-buildrequires + rm -rfv bluepyopt-1.14.13.dist-info/ removed 'bluepyopt-1.14.13.dist-info/entry_points.txt' removed 'bluepyopt-1.14.13.dist-info/top_level.txt' removed 'bluepyopt-1.14.13.dist-info/METADATA' removed 'bluepyopt-1.14.13.dist-info/licenses/LICENSE.txt' removed 'bluepyopt-1.14.13.dist-info/licenses/COPYING' removed 'bluepyopt-1.14.13.dist-info/licenses/COPYING.lesser' removed 'bluepyopt-1.14.13.dist-info/licenses/AUTHORS.txt' removed directory 'bluepyopt-1.14.13.dist-info/licenses' removed directory 'bluepyopt-1.14.13.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-bluepyopt-1.14.13-2.fc43.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 90.7 KiB/s | 29.3 KiB | 00m00s Copr repository 100% | 68.6 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "gcc-c++-15.1.1-1.fc43.x86_64" is already installed. Package "libX11-devel-1.8.11-1.fc42.x86_64" is already installed. Package "libXext-devel-1.3.6-3.fc42.x86_64" is already installed. Package "neuron-devel-8.2.6-2.fc43.x86_64" is already installed. Package "pyproject-rpm-macros-1.18.1-1.fc43.noarch" is already installed. Package "arbor-0.9.0-12.fc42.x86_64" is already installed. Package "python3-devel-3.13.3-2.fc43.x86_64" is already installed. Package "python3-jupyter-client-8.6.1-11.fc42.noarch" is already installed. Package "python3-lfpy-2.3.2-5.fc42.x86_64" is already installed. Package "python3-matplotlib-3.10.0-3.fc42.x86_64" is already installed. Package "python3-meautility-1.5.2-2.fc43.noarch" is already installed. Package "python3-nbconvert-7.16.4-7.fc43.noarch" is already installed. Package "python3-neuron-8.2.6-2.fc43.x86_64" is already installed. Package "python3-papermill-2.6.0-6.fc42.noarch" is already installed. Package "python3-pytest-8.3.5-2.fc43.noarch" is already installed. Package "python3-jinja2-3.1.6-1.fc43.noarch" is already installed. Package "python3-neuron-8.2.6-2.fc43.x86_64" is already installed. Package "python3-numpy-1:2.2.5-1.fc43.x86_64" is already installed. Package "python3-packaging-24.2-3.fc42.noarch" is already installed. Package "python3-setuptools-78.1.0-1.fc43.noarch" is already installed. Package Arch Version Repository Size Installing: python3-deap x86_64 1.4.1-9.fc42 fedora 892.9 KiB python3-efel x86_64 5.7.16-2.fc43 fedora 668.4 KiB python3-ipyparallel noarch 9.0.1-1.fc43 fedora 1.9 MiB python3-pandas x86_64 2.2.3-1.fc42~bootstrap fedora 42.2 MiB python3-pebble noarch 5.1.1-1.fc43 fedora 211.4 KiB python3-pickleshare noarch 0.7.5-19.fc42 fedora 26.9 KiB python3-pip noarch 25.0.1-3.fc43 fedora 11.6 MiB Installing dependencies: hdmf-common-schema noarch 1:1.8.0-9.fc43 fedora 18.6 KiB python-jupyter-filesystem noarch 5.7.2-8.fc42 fedora 0.0 B python3-asttokens noarch 2.4.1-9.fc42 fedora 207.7 KiB python3-comm noarch 0.2.2-4.fc42 fedora 32.3 KiB python3-decorator noarch 5.1.1-14.fc42 fedora 78.5 KiB python3-executing noarch 2.2.0-1.fc42 fedora 264.8 KiB python3-hdmf noarch 4.0.0-3.fc43 fedora 1.8 MiB python3-ipykernel noarch 6.29.3-10.fc43 fedora 953.8 KiB python3-ipython noarch 8.32.0-1.fc43 fedora 4.6 MiB python3-jedi noarch 0.19.2-1.fc43 fedora 5.6 MiB python3-matplotlib-inline noarch 0.1.7-5.fc42 fedora 39.5 KiB python3-neo noarch 0.14.0-2.fc43 fedora 6.6 MiB python3-nest-asyncio noarch 1.6.0-5.fc42 fedora 25.7 KiB python3-parso noarch 0.8.4-6.fc43 fedora 896.3 KiB python3-pexpect noarch 4.9.0-9.fc43 fedora 620.4 KiB python3-prompt-toolkit noarch 3.0.41-6.fc42 fedora 3.7 MiB python3-psutil x86_64 6.1.1-2.fc42 fedora 1.4 MiB python3-ptyprocess noarch 0.7.0-10.fc42 fedora 79.6 KiB python3-pure-eval noarch 0.2.3-2.fc42 fedora 100.2 KiB python3-pynwb noarch 2.8.3-3.fc42 fedora 2.4 MiB python3-pytz noarch 2025.2-1.fc43 fedora 204.7 KiB python3-quantities noarch 0.16.2-1.fc43 fedora 884.7 KiB python3-ruamel-yaml noarch 0.18.10-2.fc42 fedora 1.6 MiB python3-ruamel-yaml-clib x86_64 0.2.12-4.fc42 fedora 259.3 KiB python3-stack-data noarch 0.6.3-12.fc42 fedora 207.5 KiB python3-wcwidth noarch 0.2.13-6.fc42 fedora 559.7 KiB Transaction Summary: Installing: 33 packages Total size of inbound packages is 21 MiB. Need to download 18 MiB. After this operation, 91 MiB extra will be used (install 91 MiB, remove 0 B). [ 1/33] python3-pip-0:25.0.1-3.fc43.noa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 2/33] python3-ipyparallel-0:9.0.1-1.f 100% | 30.2 MiB/s | 525.7 KiB | 00m00s [ 3/33] python3-deap-0:1.4.1-9.fc42.x86 100% | 12.7 MiB/s | 221.0 KiB | 00m00s [ 4/33] python3-efel-0:5.7.16-2.fc43.x8 100% | 11.6 MiB/s | 225.1 KiB | 00m00s [ 5/33] python3-pickleshare-0:0.7.5-19. 100% | 9.8 MiB/s | 20.0 KiB | 00m00s [ 6/33] python3-pebble-0:5.1.1-1.fc43.n 100% | 9.0 MiB/s | 82.6 KiB | 00m00s [ 7/33] python3-neo-0:0.14.0-2.fc43.noa 100% | 141.2 MiB/s | 1.4 MiB | 00m00s [ 8/33] python-jupyter-filesystem-0:5.7 100% | 3.1 MiB/s | 9.4 KiB | 00m00s [ 9/33] python3-decorator-0:5.1.1-14.fc 100% | 10.1 MiB/s | 31.1 KiB | 00m00s [10/33] python3-pandas-0:2.2.3-1.fc42~b 100% | 221.5 MiB/s | 8.0 MiB | 00m00s [11/33] python3-ipykernel-0:6.29.3-10.f 100% | 15.7 MiB/s | 257.8 KiB | 00m00s [12/33] python3-psutil-0:6.1.1-2.fc42.x 100% | 53.8 MiB/s | 275.3 KiB | 00m00s [13/33] python3-pytz-0:2025.2-1.fc43.no 100% | 30.2 MiB/s | 61.8 KiB | 00m00s [14/33] python3-pynwb-0:2.8.3-3.fc42.no 100% | 31.5 MiB/s | 1.4 MiB | 00m00s [15/33] python3-ipython-0:8.32.0-1.fc43 100% | 60.1 MiB/s | 1.1 MiB | 00m00s [16/33] python3-quantities-0:0.16.2-1.f 100% | 28.8 MiB/s | 265.6 KiB | 00m00s [17/33] python3-comm-0:0.2.2-4.fc42.noa 100% | 10.0 MiB/s | 20.5 KiB | 00m00s [18/33] python3-nest-asyncio-0:1.6.0-5. 100% | 9.4 MiB/s | 19.2 KiB | 00m00s [19/33] python3-matplotlib-inline-0:0.1 100% | 4.7 MiB/s | 24.0 KiB | 00m00s [20/33] python3-pexpect-0:4.9.0-9.fc43. 100% | 57.7 MiB/s | 177.1 KiB | 00m00s [21/33] python3-jedi-0:0.19.2-1.fc43.no 100% | 195.4 MiB/s | 1.6 MiB | 00m00s [22/33] python3-prompt-toolkit-0:3.0.41 100% | 138.6 MiB/s | 851.5 KiB | 00m00s [23/33] python3-hdmf-0:4.0.0-3.fc43.noa 100% | 24.0 MiB/s | 467.1 KiB | 00m00s [24/33] hdmf-common-schema-1:1.8.0-9.fc 100% | 5.3 MiB/s | 16.2 KiB | 00m00s [25/33] python3-ruamel-yaml-0:0.18.10-2 100% | 98.2 MiB/s | 301.5 KiB | 00m00s [26/33] python3-ptyprocess-0:0.7.0-10.f 100% | 17.6 MiB/s | 36.0 KiB | 00m00s [27/33] python3-wcwidth-0:0.2.13-6.fc42 100% | 25.6 MiB/s | 52.4 KiB | 00m00s [28/33] python3-stack-data-0:0.6.3-12.f 100% | 4.1 MiB/s | 63.6 KiB | 00m00s [29/33] python3-parso-0:0.8.4-6.fc43.no 100% | 11.5 MiB/s | 212.6 KiB | 00m00s [30/33] python3-asttokens-0:2.4.1-9.fc4 100% | 4.4 MiB/s | 62.6 KiB | 00m00s [31/33] python3-executing-0:2.2.0-1.fc4 100% | 5.0 MiB/s | 71.2 KiB | 00m00s [32/33] python3-ruamel-yaml-clib-0:0.2. 100% | 34.0 MiB/s | 104.3 KiB | 00m00s [33/33] python3-pure-eval-0:0.2.3-2.fc4 100% | 2.5 MiB/s | 38.7 KiB | 00m00s -------------------------------------------------------------------------------- [33/33] Total 100% | 38.2 MiB/s | 17.9 MiB | 00m00s Running transaction [ 1/35] Verify package files 100% | 1.1 KiB/s | 33.0 B | 00m00s [ 2/35] Prepare transaction 100% | 407.0 B/s | 33.0 B | 00m00s [ 3/35] Installing python3-matplotlib-i 100% | 42.6 MiB/s | 43.7 KiB | 00m00s [ 4/35] Installing python3-psutil-0:6.1 100% | 359.1 MiB/s | 1.4 MiB | 00m00s [ 5/35] Installing python3-decorator-0: 100% | 79.2 MiB/s | 81.1 KiB | 00m00s [ 6/35] Installing python-jupyter-files 100% | 2.0 MiB/s | 2.1 KiB | 00m00s [ 7/35] Installing python3-ruamel-yaml- 100% | 333.1 MiB/s | 1.7 MiB | 00m00s [ 8/35] Installing python3-ruamel-yaml- 100% | 255.4 MiB/s | 261.5 KiB | 00m00s [ 9/35] Installing python3-pure-eval-0: 100% | 102.5 MiB/s | 104.9 KiB | 00m00s [10/35] Installing python3-executing-0: 100% | 264.1 MiB/s | 270.5 KiB | 00m00s [11/35] Installing python3-asttokens-0: 100% | 208.9 MiB/s | 213.9 KiB | 00m00s [12/35] Installing python3-stack-data-0 100% | 207.8 MiB/s | 212.8 KiB | 00m00s [13/35] Installing python3-wcwidth-0:0. 100% | 184.0 MiB/s | 565.4 KiB | 00m00s [14/35] Installing python3-prompt-toolk 100% | 223.1 MiB/s | 3.8 MiB | 00m00s [15/35] Installing python3-ptyprocess-0 100% | 81.8 MiB/s | 83.8 KiB | 00m00s [16/35] Installing python3-pexpect-0:4. 100% | 207.9 MiB/s | 638.7 KiB | 00m00s [17/35] Installing python3-parso-0:0.8. 100% | 111.3 MiB/s | 911.9 KiB | 00m00s [18/35] Installing python3-jedi-0:0.19. 100% | 98.2 MiB/s | 6.1 MiB | 00m00s [19/35] Installing python3-ipython-0:8. 100% | 150.8 MiB/s | 4.7 MiB | 00m00s [20/35] Installing hdmf-common-schema-1 100% | 20.3 MiB/s | 20.8 KiB | 00m00s [21/35] Installing python3-nest-asyncio 100% | 0.0 B/s | 27.7 KiB | 00m00s [22/35] Installing python3-comm-0:0.2.2 100% | 34.4 MiB/s | 35.3 KiB | 00m00s [23/35] Installing python3-ipykernel-0: 100% | 160.0 MiB/s | 983.1 KiB | 00m00s [24/35] Installing python3-quantities-0 100% | 114.1 MiB/s | 934.3 KiB | 00m00s [25/35] Installing python3-neo-0:0.14.0 100% | 268.5 MiB/s | 6.7 MiB | 00m00s [26/35] Installing python3-pytz-0:2025. 100% | 51.2 MiB/s | 209.9 KiB | 00m00s [27/35] Installing python3-pandas-0:2.2 100% | 400.3 MiB/s | 42.4 MiB | 00m00s [28/35] Installing python3-hdmf-0:4.0.0 100% | 94.0 MiB/s | 1.9 MiB | 00m00s [29/35] Installing python3-pynwb-0:2.8. 100% | 224.5 MiB/s | 2.5 MiB | 00m00s [30/35] Installing python3-efel-0:5.7.1 100% | 166.0 MiB/s | 680.0 KiB | 00m00s [31/35] Installing python3-ipyparallel- 100% | 82.4 MiB/s | 2.0 MiB | 00m00s [32/35] Installing python3-pip-0:25.0.1 100% | 197.5 MiB/s | 11.8 MiB | 00m00s [33/35] Installing python3-pickleshare- 100% | 28.0 MiB/s | 28.7 KiB | 00m00s [34/35] Installing python3-pebble-0:5.1 100% | 109.7 MiB/s | 224.7 KiB | 00m00s [35/35] Installing python3-deap-0:1.4.1 100% | 26.1 MiB/s | 909.5 KiB | 00m00s Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1737158400 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.QAVALk + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.13-build + cd BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir + RPM_TOXENV=py313 + FEDORA=43 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/pyproject-wheeldir --output /builddir/build/BUILD/python-bluepyopt-1.14.13-build/python-bluepyopt-1.14.13-2.fc43.x86_64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 78.1.0) /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/versioneer.py:575: SyntaxWarning: invalid escape sequence '\s' mo = re.search(r'=\s*"(.*)"', line) Warning: 'keywords' should be a list, got type 'tuple' /usr/lib/python3.13/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running egg_info writing bluepyopt.egg-info/PKG-INFO writing dependency_links to bluepyopt.egg-info/dependency_links.txt writing entry points to bluepyopt.egg-info/entry_points.txt writing requirements to bluepyopt.egg-info/requires.txt writing top-level names to bluepyopt.egg-info/top_level.txt reading manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file 'bluepyopt.egg-info/SOURCES.txt' /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/versioneer.py:575: SyntaxWarning: invalid escape sequence '\s' mo = re.search(r'=\s*"(.*)"', line) Warning: 'keywords' should be a list, got type 'tuple' running dist_info writing bluepyopt.egg-info/PKG-INFO writing dependency_links to bluepyopt.egg-info/dependency_links.txt writing entry points to bluepyopt.egg-info/entry_points.txt writing requirements to bluepyopt.egg-info/requires.txt writing top-level names to bluepyopt.egg-info/top_level.txt reading manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file 'bluepyopt.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt-1.14.13.dist-info' Handling numpy>=1.6 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: numpy>=1.6 (installed: numpy 2.2.5) Handling pandas>=0.18 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: pandas>=0.18 (installed: pandas 2.2.3) Handling deap>=1.3.3 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: deap>=1.3.3 (installed: deap 1.4.1) Handling efel>=2.13 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: efel>=2.13 (installed: efel 5.7.16) Handling ipyparallel from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: ipyparallel (installed: ipyparallel 9.0.1) Handling pickleshare>=0.7.3 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: pickleshare>=0.7.3 (installed: pickleshare 0.7.5) Handling Jinja2>=2.8 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: Jinja2>=2.8 (installed: Jinja2 3.1.6) Handling Pebble>=4.6.0 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: Pebble>=4.6.0 (installed: Pebble 5.1.1) Handling NEURON>=7.8 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: NEURON>=7.8 (installed: NEURON 8.2.6) Handling pyneuroml>=0.5.20; extra == "all" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml>=0.5.20; extra == "all" Handling libNeuroML>=0.3.1; extra == "all" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML>=0.3.1; extra == "all" Handling LFPy>=2.3; extra == "all" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy>=2.3; extra == "all" Handling arbor>=0.7; extra == "all" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor>=0.7; extra == "all" Handling pyneuroml>=0.5.20; extra == "tests" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml>=0.5.20; extra == "tests" Handling libNeuroML>=0.3.1; extra == "tests" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML>=0.3.1; extra == "tests" Handling LFPy>=2.3; extra == "tests" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy>=2.3; extra == "tests" Handling arbor>=0.7; extra == "tests" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor>=0.7; extra == "tests" Handling pyneuroml>=0.5.20; extra == "neuroml" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml>=0.5.20; extra == "neuroml" Handling libNeuroML>=0.3.1; extra == "neuroml" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML>=0.3.1; extra == "neuroml" Handling LFPy>=2.3; extra == "lfpy" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy>=2.3; extra == "lfpy" Handling arbor>=0.7; extra == "arbor" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor>=0.7; extra == "arbor" + cat /builddir/build/BUILD/python-bluepyopt-1.14.13-build/python-bluepyopt-1.14.13-2.fc43.x86_64-pyproject-buildrequires + rm -rfv bluepyopt-1.14.13.dist-info/ removed 'bluepyopt-1.14.13.dist-info/entry_points.txt' removed 'bluepyopt-1.14.13.dist-info/top_level.txt' removed 'bluepyopt-1.14.13.dist-info/METADATA' removed 'bluepyopt-1.14.13.dist-info/licenses/LICENSE.txt' removed 'bluepyopt-1.14.13.dist-info/licenses/COPYING' removed 'bluepyopt-1.14.13.dist-info/licenses/COPYING.lesser' removed 'bluepyopt-1.14.13.dist-info/licenses/AUTHORS.txt' removed directory 'bluepyopt-1.14.13.dist-info/licenses' removed directory 'bluepyopt-1.14.13.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-bluepyopt-1.14.13-2.fc43.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 84.4 KiB/s | 29.3 KiB | 00m00s Copr repository 100% | 94.3 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "gcc-c++-15.1.1-1.fc43.x86_64" is already installed. Package "libX11-devel-1.8.11-1.fc42.x86_64" is already installed. Package "libXext-devel-1.3.6-3.fc42.x86_64" is already installed. Package "neuron-devel-8.2.6-2.fc43.x86_64" is already installed. Package "pyproject-rpm-macros-1.18.1-1.fc43.noarch" is already installed. Package "arbor-0.9.0-12.fc42.x86_64" is already installed. Package "python3-devel-3.13.3-2.fc43.x86_64" is already installed. Package "python3-jupyter-client-8.6.1-11.fc42.noarch" is already installed. Package "python3-lfpy-2.3.2-5.fc42.x86_64" is already installed. Package "python3-matplotlib-3.10.0-3.fc42.x86_64" is already installed. Package "python3-meautility-1.5.2-2.fc43.noarch" is already installed. Package "python3-nbconvert-7.16.4-7.fc43.noarch" is already installed. Package "python3-neuron-8.2.6-2.fc43.x86_64" is already installed. Package "python3-papermill-2.6.0-6.fc42.noarch" is already installed. Package "python3-pytest-8.3.5-2.fc43.noarch" is already installed. Package "python3-deap-1.4.1-9.fc42.x86_64" is already installed. Package "python3-efel-5.7.16-2.fc43.x86_64" is already installed. Package "python3-ipyparallel-9.0.1-1.fc43.noarch" is already installed. Package "python3-jinja2-3.1.6-1.fc43.noarch" is already installed. Package "python3-neuron-8.2.6-2.fc43.x86_64" is already installed. Package "python3-numpy-1:2.2.5-1.fc43.x86_64" is already installed. Package "python3-packaging-24.2-3.fc42.noarch" is already installed. Package "python3-pandas-2.2.3-1.fc42~bootstrap.x86_64" is already installed. Package "python3-pebble-5.1.1-1.fc43.noarch" is already installed. Package "python3-pickleshare-0.7.5-19.fc42.noarch" is already installed. Package "python3-pip-25.0.1-3.fc43.noarch" is already installed. Package "python3-setuptools-78.1.0-1.fc43.noarch" is already installed. Nothing to do. Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1737158400 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.oXNcjF + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.13-build + cd BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir + RPM_TOXENV=py313 + FEDORA=43 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/pyproject-wheeldir --output /builddir/build/BUILD/python-bluepyopt-1.14.13-build/python-bluepyopt-1.14.13-2.fc43.x86_64-pyproject-buildrequires -r Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 78.1.0) /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/versioneer.py:575: SyntaxWarning: invalid escape sequence '\s' mo = re.search(r'=\s*"(.*)"', line) Warning: 'keywords' should be a list, got type 'tuple' /usr/lib/python3.13/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running egg_info writing bluepyopt.egg-info/PKG-INFO writing dependency_links to bluepyopt.egg-info/dependency_links.txt writing entry points to bluepyopt.egg-info/entry_points.txt writing requirements to bluepyopt.egg-info/requires.txt writing top-level names to bluepyopt.egg-info/top_level.txt reading manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file 'bluepyopt.egg-info/SOURCES.txt' /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/versioneer.py:575: SyntaxWarning: invalid escape sequence '\s' mo = re.search(r'=\s*"(.*)"', line) Warning: 'keywords' should be a list, got type 'tuple' running dist_info writing bluepyopt.egg-info/PKG-INFO writing dependency_links to bluepyopt.egg-info/dependency_links.txt writing entry points to bluepyopt.egg-info/entry_points.txt writing requirements to bluepyopt.egg-info/requires.txt writing top-level names to bluepyopt.egg-info/top_level.txt reading manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file 'bluepyopt.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt-1.14.13.dist-info' Handling numpy>=1.6 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: numpy>=1.6 (installed: numpy 2.2.5) Handling pandas>=0.18 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: pandas>=0.18 (installed: pandas 2.2.3) Handling deap>=1.3.3 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: deap>=1.3.3 (installed: deap 1.4.1) Handling efel>=2.13 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: efel>=2.13 (installed: efel 5.7.16) Handling ipyparallel from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: ipyparallel (installed: ipyparallel 9.0.1) Handling pickleshare>=0.7.3 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: pickleshare>=0.7.3 (installed: pickleshare 0.7.5) Handling Jinja2>=2.8 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: Jinja2>=2.8 (installed: Jinja2 3.1.6) Handling Pebble>=4.6.0 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: Pebble>=4.6.0 (installed: Pebble 5.1.1) Handling NEURON>=7.8 from hook generated metadata: Requires-Dist (bluepyopt) Requirement satisfied: NEURON>=7.8 (installed: NEURON 8.2.6) Handling pyneuroml>=0.5.20; extra == "all" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml>=0.5.20; extra == "all" Handling libNeuroML>=0.3.1; extra == "all" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML>=0.3.1; extra == "all" Handling LFPy>=2.3; extra == "all" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy>=2.3; extra == "all" Handling arbor>=0.7; extra == "all" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor>=0.7; extra == "all" Handling pyneuroml>=0.5.20; extra == "tests" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml>=0.5.20; extra == "tests" Handling libNeuroML>=0.3.1; extra == "tests" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML>=0.3.1; extra == "tests" Handling LFPy>=2.3; extra == "tests" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy>=2.3; extra == "tests" Handling arbor>=0.7; extra == "tests" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor>=0.7; extra == "tests" Handling pyneuroml>=0.5.20; extra == "neuroml" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: pyneuroml>=0.5.20; extra == "neuroml" Handling libNeuroML>=0.3.1; extra == "neuroml" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: libNeuroML>=0.3.1; extra == "neuroml" Handling LFPy>=2.3; extra == "lfpy" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: LFPy>=2.3; extra == "lfpy" Handling arbor>=0.7; extra == "arbor" from hook generated metadata: Requires-Dist (bluepyopt) Ignoring alien requirement: arbor>=0.7; extra == "arbor" + cat /builddir/build/BUILD/python-bluepyopt-1.14.13-build/python-bluepyopt-1.14.13-2.fc43.x86_64-pyproject-buildrequires + rm -rfv bluepyopt-1.14.13.dist-info/ removed 'bluepyopt-1.14.13.dist-info/entry_points.txt' removed 'bluepyopt-1.14.13.dist-info/top_level.txt' removed 'bluepyopt-1.14.13.dist-info/METADATA' removed 'bluepyopt-1.14.13.dist-info/licenses/LICENSE.txt' removed 'bluepyopt-1.14.13.dist-info/licenses/COPYING' removed 'bluepyopt-1.14.13.dist-info/licenses/COPYING.lesser' removed 'bluepyopt-1.14.13.dist-info/licenses/AUTHORS.txt' removed directory 'bluepyopt-1.14.13.dist-info/licenses' removed directory 'bluepyopt-1.14.13.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.huI9Oq + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.13-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3 + mkdir -p /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/pyproject-wheeldir Processing /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/versioneer.py:575: SyntaxWarning: invalid escape sequence '\s' mo = re.search(r'=\s*"(.*)"', line) Warning: 'keywords' should be a list, got type 'tuple' /usr/lib/python3.13/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running dist_info creating /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir/pip-modern-metadata-un5nkuyi/bluepyopt.egg-info writing /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir/pip-modern-metadata-un5nkuyi/bluepyopt.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir/pip-modern-metadata-un5nkuyi/bluepyopt.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir/pip-modern-metadata-un5nkuyi/bluepyopt.egg-info/entry_points.txt writing requirements to /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir/pip-modern-metadata-un5nkuyi/bluepyopt.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir/pip-modern-metadata-un5nkuyi/bluepyopt.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir/pip-modern-metadata-un5nkuyi/bluepyopt.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir/pip-modern-metadata-un5nkuyi/bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir/pip-modern-metadata-un5nkuyi/bluepyopt.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir/pip-modern-metadata-un5nkuyi/bluepyopt-1.14.13.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: bluepyopt Building wheel for bluepyopt (pyproject.toml): started Running command Building wheel for bluepyopt (pyproject.toml) Warning: 'keywords' should be a list, got type 'tuple' /usr/lib/python3.13/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel running build running build_py creating build/lib/bluepyopt copying bluepyopt/__init__.py -> build/lib/bluepyopt copying bluepyopt/_version.py -> build/lib/bluepyopt copying bluepyopt/api.py -> build/lib/bluepyopt copying bluepyopt/evaluators.py -> build/lib/bluepyopt copying bluepyopt/objectives.py -> build/lib/bluepyopt copying bluepyopt/optimisations.py -> build/lib/bluepyopt copying bluepyopt/parameters.py -> build/lib/bluepyopt copying bluepyopt/stoppingCriteria.py -> build/lib/bluepyopt copying bluepyopt/tools.py -> build/lib/bluepyopt creating build/lib/bluepyopt/deapext copying bluepyopt/deapext/CMA_MO.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/CMA_SO.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/__init__.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/algorithms.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/hype.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/optimisations.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/optimisationsCMA.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/stoppingCriteria.py -> build/lib/bluepyopt/deapext copying bluepyopt/deapext/utils.py -> build/lib/bluepyopt/deapext creating build/lib/bluepyopt/ephys copying bluepyopt/ephys/__init__.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/acc.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/base.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/create_acc.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/create_hoc.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/efeatures.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/evaluators.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/extra_features_utils.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/locations.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/mechanisms.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/models.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/morphologies.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/objectives.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/objectivescalculators.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/parameters.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/protocols.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/recordings.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/responses.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/serializer.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/simulators.py -> build/lib/bluepyopt/ephys copying bluepyopt/ephys/stimuli.py -> build/lib/bluepyopt/ephys creating build/lib/bluepyopt/ipyp copying bluepyopt/ipyp/__init__.py -> build/lib/bluepyopt/ipyp copying bluepyopt/ipyp/bpopt_tasksdb.py -> build/lib/bluepyopt/ipyp creating build/lib/bluepyopt/neuroml copying bluepyopt/neuroml/__init__.py -> build/lib/bluepyopt/neuroml copying bluepyopt/neuroml/biophys.py -> build/lib/bluepyopt/neuroml copying bluepyopt/neuroml/cell.py -> build/lib/bluepyopt/neuroml copying bluepyopt/neuroml/morphology.py -> build/lib/bluepyopt/neuroml copying bluepyopt/neuroml/simulation.py -> build/lib/bluepyopt/neuroml creating build/lib/bluepyopt/tests copying bluepyopt/tests/__init__.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/disable_simplecell_scoop.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_bluepyopt.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_evaluators.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_l5pc.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_lfpy.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_parameters.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_simplecell.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_stochkv.py -> build/lib/bluepyopt/tests copying bluepyopt/tests/test_tools.py -> build/lib/bluepyopt/tests creating build/lib/bluepyopt/deapext/tools copying bluepyopt/deapext/tools/__init__.py -> build/lib/bluepyopt/deapext/tools copying bluepyopt/deapext/tools/selIBEA.py -> build/lib/bluepyopt/deapext/tools creating build/lib/bluepyopt/ephys/examples copying bluepyopt/ephys/examples/__init__.py -> build/lib/bluepyopt/ephys/examples creating build/lib/bluepyopt/ephys/parameterscalers copying bluepyopt/ephys/parameterscalers/__init__.py -> build/lib/bluepyopt/ephys/parameterscalers copying bluepyopt/ephys/parameterscalers/acc_iexpr.py -> build/lib/bluepyopt/ephys/parameterscalers copying bluepyopt/ephys/parameterscalers/parameterscalers.py -> build/lib/bluepyopt/ephys/parameterscalers creating build/lib/bluepyopt/ephys/examples/simplecell copying bluepyopt/ephys/examples/simplecell/__init__.py -> build/lib/bluepyopt/ephys/examples/simplecell copying bluepyopt/ephys/examples/simplecell/simplecell.py -> build/lib/bluepyopt/ephys/examples/simplecell creating build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/__init__.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/deapext_test_utils.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/test_algorithms.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/test_hype.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/test_optimisations.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/test_optimisationsCMA.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/test_selIBEA.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/test_stoppingCriteria.py -> build/lib/bluepyopt/tests/test_deapext copying bluepyopt/tests/test_deapext/test_utils.py -> build/lib/bluepyopt/tests/test_deapext creating build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/__init__.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_acc.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_create_acc.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_create_hoc.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_evaluators.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_extra_features_utils.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_features.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_init.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_locations.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_mechanisms.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_models.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_morphologies.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_objectives.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_parameters.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_parameterscalers.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_protocols.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_recordings.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_serializer.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_simulators.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/test_stimuli.py -> build/lib/bluepyopt/tests/test_ephys copying bluepyopt/tests/test_ephys/utils.py -> build/lib/bluepyopt/tests/test_ephys creating build/lib/bluepyopt/tests/test_ephys/testmodels copying bluepyopt/tests/test_ephys/testmodels/__init__.py -> build/lib/bluepyopt/tests/test_ephys/testmodels copying bluepyopt/tests/test_ephys/testmodels/dummycells.py -> build/lib/bluepyopt/tests/test_ephys/testmodels creating build/lib/bluepyopt/ephys/static copying bluepyopt/ephys/static/arbor_mechanisms.json -> build/lib/bluepyopt/ephys/static creating build/lib/bluepyopt/ephys/templates copying bluepyopt/ephys/templates/cell_template.jinja2 -> build/lib/bluepyopt/ephys/templates creating build/lib/bluepyopt/ephys/templates/acc copying bluepyopt/ephys/templates/acc/_json_template.jinja2 -> build/lib/bluepyopt/ephys/templates/acc copying bluepyopt/ephys/templates/acc/decor_acc_template.jinja2 -> build/lib/bluepyopt/ephys/templates/acc copying bluepyopt/ephys/templates/acc/label_dict_acc_template.jinja2 -> build/lib/bluepyopt/ephys/templates/acc copying bluepyopt/ephys/examples/simplecell/simple.swc -> build/lib/bluepyopt/ephys/examples/simplecell creating build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/Ca.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/Ca_HVA.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/Ca_LVAst.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/Ih.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/Im.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/K_Pst.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/K_Tst.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/KdShu2007.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/NaTa_t.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/NaTs2_t.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/Nap_Et2.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/SK_E2.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/SKv3_1.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/StochKv_deterministic.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/baseCaDynamics_E2_NML2.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms copying bluepyopt/neuroml/NeuroML2_mechanisms/pas.channel.nml -> build/lib/bluepyopt/neuroml/NeuroML2_mechanisms UPDATING build/lib/bluepyopt/_version.py set build/lib/bluepyopt/_version.py to '1.14.13' installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/bluepyopt copying build/lib/bluepyopt/__init__.py -> build/bdist.linux-x86_64/wheel/./bluepyopt copying build/lib/bluepyopt/api.py -> build/bdist.linux-x86_64/wheel/./bluepyopt copying build/lib/bluepyopt/evaluators.py -> build/bdist.linux-x86_64/wheel/./bluepyopt copying build/lib/bluepyopt/objectives.py -> build/bdist.linux-x86_64/wheel/./bluepyopt copying build/lib/bluepyopt/optimisations.py -> build/bdist.linux-x86_64/wheel/./bluepyopt copying build/lib/bluepyopt/parameters.py -> build/bdist.linux-x86_64/wheel/./bluepyopt copying build/lib/bluepyopt/stoppingCriteria.py -> build/bdist.linux-x86_64/wheel/./bluepyopt copying build/lib/bluepyopt/tools.py -> build/bdist.linux-x86_64/wheel/./bluepyopt creating build/bdist.linux-x86_64/wheel/bluepyopt/deapext copying build/lib/bluepyopt/deapext/CMA_MO.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/CMA_SO.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/__init__.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/algorithms.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/hype.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/optimisations.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/optimisationsCMA.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/stoppingCriteria.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/deapext copying build/lib/bluepyopt/deapext/utils.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/deapext creating build/bdist.linux-x86_64/wheel/bluepyopt/deapext/tools copying build/lib/bluepyopt/deapext/tools/__init__.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/deapext/tools copying build/lib/bluepyopt/deapext/tools/selIBEA.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/deapext/tools creating build/bdist.linux-x86_64/wheel/bluepyopt/ephys copying build/lib/bluepyopt/ephys/__init__.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/acc.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/base.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/create_acc.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/create_hoc.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/efeatures.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/evaluators.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/extra_features_utils.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/locations.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/mechanisms.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/models.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/morphologies.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/objectives.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/objectivescalculators.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/parameters.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/protocols.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/recordings.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/responses.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/serializer.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/simulators.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys copying build/lib/bluepyopt/ephys/stimuli.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys creating build/bdist.linux-x86_64/wheel/bluepyopt/ephys/examples copying build/lib/bluepyopt/ephys/examples/__init__.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys/examples creating build/bdist.linux-x86_64/wheel/bluepyopt/ephys/examples/simplecell copying build/lib/bluepyopt/ephys/examples/simplecell/__init__.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys/examples/simplecell copying build/lib/bluepyopt/ephys/examples/simplecell/simplecell.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys/examples/simplecell copying build/lib/bluepyopt/ephys/examples/simplecell/simple.swc -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys/examples/simplecell creating build/bdist.linux-x86_64/wheel/bluepyopt/ephys/parameterscalers copying build/lib/bluepyopt/ephys/parameterscalers/__init__.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys/parameterscalers copying build/lib/bluepyopt/ephys/parameterscalers/acc_iexpr.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys/parameterscalers copying build/lib/bluepyopt/ephys/parameterscalers/parameterscalers.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys/parameterscalers creating build/bdist.linux-x86_64/wheel/bluepyopt/ephys/static copying build/lib/bluepyopt/ephys/static/arbor_mechanisms.json -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys/static creating build/bdist.linux-x86_64/wheel/bluepyopt/ephys/templates copying build/lib/bluepyopt/ephys/templates/cell_template.jinja2 -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys/templates creating build/bdist.linux-x86_64/wheel/bluepyopt/ephys/templates/acc copying build/lib/bluepyopt/ephys/templates/acc/_json_template.jinja2 -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys/templates/acc copying build/lib/bluepyopt/ephys/templates/acc/decor_acc_template.jinja2 -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys/templates/acc copying build/lib/bluepyopt/ephys/templates/acc/label_dict_acc_template.jinja2 -> build/bdist.linux-x86_64/wheel/./bluepyopt/ephys/templates/acc creating build/bdist.linux-x86_64/wheel/bluepyopt/ipyp copying build/lib/bluepyopt/ipyp/__init__.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ipyp copying build/lib/bluepyopt/ipyp/bpopt_tasksdb.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/ipyp creating build/bdist.linux-x86_64/wheel/bluepyopt/neuroml copying build/lib/bluepyopt/neuroml/__init__.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml copying build/lib/bluepyopt/neuroml/biophys.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml copying build/lib/bluepyopt/neuroml/cell.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml copying build/lib/bluepyopt/neuroml/morphology.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml copying build/lib/bluepyopt/neuroml/simulation.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml creating build/bdist.linux-x86_64/wheel/bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/Ca.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/Ca_HVA.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/Ca_LVAst.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/Ih.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/Im.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/K_Pst.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/K_Tst.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/KdShu2007.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/NaTa_t.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/NaTs2_t.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/Nap_Et2.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/SK_E2.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/SKv3_1.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/StochKv_deterministic.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/baseCaDynamics_E2_NML2.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms copying build/lib/bluepyopt/neuroml/NeuroML2_mechanisms/pas.channel.nml -> build/bdist.linux-x86_64/wheel/./bluepyopt/neuroml/NeuroML2_mechanisms creating build/bdist.linux-x86_64/wheel/bluepyopt/tests copying build/lib/bluepyopt/tests/__init__.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/disable_simplecell_scoop.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_bluepyopt.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_evaluators.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_l5pc.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_lfpy.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_parameters.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_simplecell.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_stochkv.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests copying build/lib/bluepyopt/tests/test_tools.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests creating build/bdist.linux-x86_64/wheel/bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/__init__.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/deapext_test_utils.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/test_algorithms.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/test_hype.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/test_optimisations.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/test_optimisationsCMA.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/test_selIBEA.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/test_stoppingCriteria.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_deapext copying build/lib/bluepyopt/tests/test_deapext/test_utils.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_deapext creating build/bdist.linux-x86_64/wheel/bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/__init__.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_acc.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_create_acc.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_create_hoc.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_evaluators.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_extra_features_utils.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_features.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_init.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_locations.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_mechanisms.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_models.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_morphologies.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_objectives.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_parameters.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_parameterscalers.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_protocols.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_recordings.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_serializer.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_simulators.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/test_stimuli.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys copying build/lib/bluepyopt/tests/test_ephys/utils.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys creating build/bdist.linux-x86_64/wheel/bluepyopt/tests/test_ephys/testmodels copying build/lib/bluepyopt/tests/test_ephys/testmodels/__init__.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys/testmodels copying build/lib/bluepyopt/tests/test_ephys/testmodels/dummycells.py -> build/bdist.linux-x86_64/wheel/./bluepyopt/tests/test_ephys/testmodels copying build/lib/bluepyopt/_version.py -> build/bdist.linux-x86_64/wheel/./bluepyopt running install_egg_info running egg_info writing bluepyopt.egg-info/PKG-INFO writing dependency_links to bluepyopt.egg-info/dependency_links.txt writing entry points to bluepyopt.egg-info/entry_points.txt writing requirements to bluepyopt.egg-info/requires.txt writing top-level names to bluepyopt.egg-info/top_level.txt reading manifest file 'bluepyopt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: manifest_maker: MANIFEST.in, line 9: unknown action 'include.txt' adding license file 'LICENSE.txt' adding license file 'COPYING' adding license file 'COPYING.lesser' adding license file 'AUTHORS.txt' writing manifest file 'bluepyopt.egg-info/SOURCES.txt' Copying bluepyopt.egg-info to build/bdist.linux-x86_64/wheel/./bluepyopt-1.14.13-py3.13.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/bluepyopt-1.14.13.dist-info/WHEEL creating '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir/pip-wheel-dg5jw91x/.tmp-12dbmz0f/bluepyopt-1.14.13-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'bluepyopt/__init__.py' adding 'bluepyopt/_version.py' adding 'bluepyopt/api.py' adding 'bluepyopt/evaluators.py' adding 'bluepyopt/objectives.py' adding 'bluepyopt/optimisations.py' adding 'bluepyopt/parameters.py' adding 'bluepyopt/stoppingCriteria.py' adding 'bluepyopt/tools.py' adding 'bluepyopt/deapext/CMA_MO.py' adding 'bluepyopt/deapext/CMA_SO.py' adding 'bluepyopt/deapext/__init__.py' adding 'bluepyopt/deapext/algorithms.py' adding 'bluepyopt/deapext/hype.py' adding 'bluepyopt/deapext/optimisations.py' adding 'bluepyopt/deapext/optimisationsCMA.py' adding 'bluepyopt/deapext/stoppingCriteria.py' adding 'bluepyopt/deapext/utils.py' adding 'bluepyopt/deapext/tools/__init__.py' adding 'bluepyopt/deapext/tools/selIBEA.py' adding 'bluepyopt/ephys/__init__.py' adding 'bluepyopt/ephys/acc.py' adding 'bluepyopt/ephys/base.py' adding 'bluepyopt/ephys/create_acc.py' adding 'bluepyopt/ephys/create_hoc.py' adding 'bluepyopt/ephys/efeatures.py' adding 'bluepyopt/ephys/evaluators.py' adding 'bluepyopt/ephys/extra_features_utils.py' adding 'bluepyopt/ephys/locations.py' adding 'bluepyopt/ephys/mechanisms.py' adding 'bluepyopt/ephys/models.py' adding 'bluepyopt/ephys/morphologies.py' adding 'bluepyopt/ephys/objectives.py' adding 'bluepyopt/ephys/objectivescalculators.py' adding 'bluepyopt/ephys/parameters.py' adding 'bluepyopt/ephys/protocols.py' adding 'bluepyopt/ephys/recordings.py' adding 'bluepyopt/ephys/responses.py' adding 'bluepyopt/ephys/serializer.py' adding 'bluepyopt/ephys/simulators.py' adding 'bluepyopt/ephys/stimuli.py' adding 'bluepyopt/ephys/examples/__init__.py' adding 'bluepyopt/ephys/examples/simplecell/__init__.py' adding 'bluepyopt/ephys/examples/simplecell/simple.swc' adding 'bluepyopt/ephys/examples/simplecell/simplecell.py' adding 'bluepyopt/ephys/parameterscalers/__init__.py' adding 'bluepyopt/ephys/parameterscalers/acc_iexpr.py' adding 'bluepyopt/ephys/parameterscalers/parameterscalers.py' adding 'bluepyopt/ephys/static/arbor_mechanisms.json' adding 'bluepyopt/ephys/templates/cell_template.jinja2' adding 'bluepyopt/ephys/templates/acc/_json_template.jinja2' adding 'bluepyopt/ephys/templates/acc/decor_acc_template.jinja2' adding 'bluepyopt/ephys/templates/acc/label_dict_acc_template.jinja2' adding 'bluepyopt/ipyp/__init__.py' adding 'bluepyopt/ipyp/bpopt_tasksdb.py' adding 'bluepyopt/neuroml/__init__.py' adding 'bluepyopt/neuroml/biophys.py' adding 'bluepyopt/neuroml/cell.py' adding 'bluepyopt/neuroml/morphology.py' adding 'bluepyopt/neuroml/simulation.py' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/Ca.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/Ca_HVA.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/Ca_LVAst.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/Ih.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/Im.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/K_Pst.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/K_Tst.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/KdShu2007.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/NaTa_t.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/NaTs2_t.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/Nap_Et2.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/SK_E2.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/SKv3_1.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/StochKv_deterministic.channel.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/baseCaDynamics_E2_NML2.nml' adding 'bluepyopt/neuroml/NeuroML2_mechanisms/pas.channel.nml' adding 'bluepyopt/tests/__init__.py' adding 'bluepyopt/tests/disable_simplecell_scoop.py' adding 'bluepyopt/tests/test_bluepyopt.py' adding 'bluepyopt/tests/test_evaluators.py' adding 'bluepyopt/tests/test_l5pc.py' adding 'bluepyopt/tests/test_lfpy.py' adding 'bluepyopt/tests/test_parameters.py' adding 'bluepyopt/tests/test_simplecell.py' adding 'bluepyopt/tests/test_stochkv.py' adding 'bluepyopt/tests/test_tools.py' adding 'bluepyopt/tests/test_deapext/__init__.py' adding 'bluepyopt/tests/test_deapext/deapext_test_utils.py' adding 'bluepyopt/tests/test_deapext/test_algorithms.py' adding 'bluepyopt/tests/test_deapext/test_hype.py' adding 'bluepyopt/tests/test_deapext/test_optimisations.py' adding 'bluepyopt/tests/test_deapext/test_optimisationsCMA.py' adding 'bluepyopt/tests/test_deapext/test_selIBEA.py' adding 'bluepyopt/tests/test_deapext/test_stoppingCriteria.py' adding 'bluepyopt/tests/test_deapext/test_utils.py' adding 'bluepyopt/tests/test_ephys/__init__.py' adding 'bluepyopt/tests/test_ephys/test_acc.py' adding 'bluepyopt/tests/test_ephys/test_create_acc.py' adding 'bluepyopt/tests/test_ephys/test_create_hoc.py' adding 'bluepyopt/tests/test_ephys/test_evaluators.py' adding 'bluepyopt/tests/test_ephys/test_extra_features_utils.py' adding 'bluepyopt/tests/test_ephys/test_features.py' adding 'bluepyopt/tests/test_ephys/test_init.py' adding 'bluepyopt/tests/test_ephys/test_locations.py' adding 'bluepyopt/tests/test_ephys/test_mechanisms.py' adding 'bluepyopt/tests/test_ephys/test_models.py' adding 'bluepyopt/tests/test_ephys/test_morphologies.py' adding 'bluepyopt/tests/test_ephys/test_objectives.py' adding 'bluepyopt/tests/test_ephys/test_parameters.py' adding 'bluepyopt/tests/test_ephys/test_parameterscalers.py' adding 'bluepyopt/tests/test_ephys/test_protocols.py' adding 'bluepyopt/tests/test_ephys/test_recordings.py' adding 'bluepyopt/tests/test_ephys/test_serializer.py' adding 'bluepyopt/tests/test_ephys/test_simulators.py' adding 'bluepyopt/tests/test_ephys/test_stimuli.py' adding 'bluepyopt/tests/test_ephys/utils.py' adding 'bluepyopt/tests/test_ephys/testmodels/__init__.py' adding 'bluepyopt/tests/test_ephys/testmodels/dummycells.py' adding 'bluepyopt-1.14.13.dist-info/licenses/AUTHORS.txt' adding 'bluepyopt-1.14.13.dist-info/licenses/COPYING' adding 'bluepyopt-1.14.13.dist-info/licenses/COPYING.lesser' adding 'bluepyopt-1.14.13.dist-info/licenses/LICENSE.txt' adding 'bluepyopt-1.14.13.dist-info/METADATA' adding 'bluepyopt-1.14.13.dist-info/WHEEL' adding 'bluepyopt-1.14.13.dist-info/entry_points.txt' adding 'bluepyopt-1.14.13.dist-info/top_level.txt' adding 'bluepyopt-1.14.13.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for bluepyopt (pyproject.toml): finished with status 'done' Created wheel for bluepyopt: filename=bluepyopt-1.14.13-py3-none-any.whl size=208414 sha256=4527aa8585319d7c34209aa585f2174b3223cfac4b01b322994c2b16b40822eb Stored in directory: /builddir/.cache/pip/wheels/db/74/dd/c5794422a378c7b030502fa4e09d206e69d0300724c0420daa Successfully built bluepyopt + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.MxDv8s + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.13-build + '[' /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT ++ dirname /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT + mkdir -p /builddir/build/BUILD/python-bluepyopt-1.14.13-build + mkdir /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3 ++ ls /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/pyproject-wheeldir/bluepyopt-1.14.13-py3-none-any.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=bluepyopt==1.14.13 + '[' -z bluepyopt==1.14.13 ']' + TMPDIR=/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/pyproject-wheeldir bluepyopt==1.14.13 Using pip 25.0.1 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/pyproject-wheeldir Processing ./pyproject-wheeldir/bluepyopt-1.14.13-py3-none-any.whl Installing collected packages: bluepyopt Creating /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/bin changing mode of /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/bin/bpopt_tasksdb to 755 Successfully installed bluepyopt-1.14.13 + '[' -d /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/bin/bpopt_tasksdb /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/bin/bpopt_tasksdb: updating + rm -rfv /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/python-bluepyopt-1.14.13-build/python-bluepyopt-1.14.13-2.fc43.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + site_dirs+=("/usr/lib/python3.13/site-packages") + '[' /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.13/site-packages/bluepyopt-1.14.13.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt-1.14.13.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT --record /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt-1.14.13.dist-info/RECORD --output /builddir/build/BUILD/python-bluepyopt-1.14.13-build/python-bluepyopt-1.14.13-2.fc43.x86_64-pyproject-record + rm -fv /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt-1.14.13.dist-info/RECORD removed '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt-1.14.13.dist-info/RECORD' + rm -fv /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt-1.14.13.dist-info/REQUESTED removed '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt-1.14.13.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-bluepyopt-1.14.13-build/python-bluepyopt-1.14.13-2.fc43.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-bluepyopt-1.14.13-build/python-bluepyopt-1.14.13-2.fc43.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-bluepyopt-1.14.13-build/python-bluepyopt-1.14.13-2.fc43.x86_64-pyproject-modules --buildroot /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/python-bluepyopt-1.14.13-build/python-bluepyopt-1.14.13-2.fc43.x86_64-pyproject-record --prefix /usr -l bluepyopt + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-python-rpm-in-distinfo + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/tools/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/tools/__pycache__/selIBEA.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/deapext/__pycache__/algorithms.cpython-313.pyc: rewriting with normalized contents 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/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_objectives.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_simulators.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_stimuli.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_locations.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_bluepyopt.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_evaluators.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/disable_simplecell_scoop.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_lfpy.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_parameters.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_simplecell.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_l5pc.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_stochkv.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_tools.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_lfpy.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_tools.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/disable_simplecell_scoop.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_evaluators.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_parameters.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_stochkv.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/_version.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/api.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/test_ephys/__pycache__/test_create_acc.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/objectives.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/evaluators.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/optimisations.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/tools.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/stoppingCriteria.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/tests/__pycache__/test_l5pc.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages/bluepyopt/__pycache__/parameters.cpython-313.pyc: rewriting with normalized contents Scanned 38 directories and 320 files, processed 135 inodes, 135 modified (78 replaced + 57 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/python-bluepyopt-1.14.13-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.6xludu + umask 022 + cd /builddir/build/BUILD/python-bluepyopt-1.14.13-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3 + '[' '!' -f /builddir/build/BUILD/python-bluepyopt-1.14.13-build/python-bluepyopt-1.14.13-2.fc43.x86_64-pyproject-modules ']' + PATH=/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages + _PYTHONSITE=/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/python-bluepyopt-1.14.13-build/python-bluepyopt-1.14.13-2.fc43.x86_64-pyproject-modules -e '*neuroml*' -e 'bluepyopt.tests*' Check import: bluepyopt Check import: bluepyopt.api Check import: bluepyopt.deapext Check import: bluepyopt.deapext.CMA_MO Check import: bluepyopt.deapext.CMA_SO Check import: bluepyopt.deapext.algorithms Check import: bluepyopt.deapext.hype Check import: bluepyopt.deapext.optimisations Check import: bluepyopt.deapext.optimisationsCMA Check import: bluepyopt.deapext.stoppingCriteria Check import: bluepyopt.deapext.tools Check import: bluepyopt.deapext.tools.selIBEA Check import: bluepyopt.deapext.utils Check import: bluepyopt.ephys Check import: bluepyopt.ephys.acc Check import: bluepyopt.ephys.base Check import: bluepyopt.ephys.create_acc Check import: bluepyopt.ephys.create_hoc Check import: bluepyopt.ephys.efeatures Check import: bluepyopt.ephys.evaluators Check import: bluepyopt.ephys.examples Check import: bluepyopt.ephys.examples.simplecell Check import: bluepyopt.ephys.examples.simplecell.simplecell Check import: bluepyopt.ephys.extra_features_utils Check import: bluepyopt.ephys.locations Check import: bluepyopt.ephys.mechanisms Check import: bluepyopt.ephys.models Check import: bluepyopt.ephys.morphologies Check import: bluepyopt.ephys.objectives Check import: bluepyopt.ephys.objectivescalculators Check import: bluepyopt.ephys.parameters Check import: bluepyopt.ephys.parameterscalers Check import: bluepyopt.ephys.parameterscalers.acc_iexpr Check import: bluepyopt.ephys.parameterscalers.parameterscalers Check import: bluepyopt.ephys.protocols Check import: bluepyopt.ephys.recordings Check import: bluepyopt.ephys.responses Check import: bluepyopt.ephys.serializer Check import: bluepyopt.ephys.simulators Check import: bluepyopt.ephys.stimuli Check import: bluepyopt.evaluators Check import: bluepyopt.ipyp Check import: bluepyopt.ipyp.bpopt_tasksdb Check import: bluepyopt.objectives Check import: bluepyopt.optimisations Check import: bluepyopt.parameters Check import: bluepyopt.stoppingCriteria Check import: bluepyopt.tools + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/make -O -j4 V=1 VERBOSE=1 stochkv_prepare l5pc_prepare sc_prepare meta_prepare cd examples/stochkv && ls mechanisms && nrnivmodl mechanisms StochKv.mod StochKv3.mod /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv Mod files: "mechanisms/mechanisms/StochKv.mod" "mechanisms/mechanisms/StochKv3.mod" Creating 'x86_64' directory for .o files. make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' -> NMODL ../mechanisms/StochKv.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "StochKv.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' -> NMODL ../mechanisms/StochKv3.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "StochKv3.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' -> Compiling mod_func.cpp gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I. -I/usr/include -fPIC -c mod_func.cpp -o mod_func.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' -> Compiling StochKv.c gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I"../mechanisms" -I. -I/usr/include -fPIC -c StochKv.c -o StochKv.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' -> Compiling StochKv3.c gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I"../mechanisms" -I. -I/usr/include -fPIC -c StochKv3.c -o StochKv3.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' => LINKING shared library ./libnrnmech.so g++ -std=c++11 -shared -I /usr/include -o ./libnrnmech.so -Wl,-soname,libnrnmech.so \ ./mod_func.o ./StochKv.o ./StochKv3.o -L/usr/lib -lnrniv -Wl,-rpath,/usr/lib -lreadline -lcurses -lform -lpython3.13 -lX11 -lXext rm -f ./.libs/libnrnmech.so ; mkdir -p ./.libs ; cp ./libnrnmech.so ./.libs/libnrnmech.so make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' => LINKING executable ./special LDFLAGS are: -lreadline -lcurses -lform -lpython3.13 -lX11 -lXext g++ -std=c++11 -I /usr/include -I /usr/include/nrncvode -DAUTO_DLOPEN_NRNMECH=0 /usr/share/nrn/nrnmain.cpp -o ./special \ -L . -lnrnmech -L/usr/lib -lnrniv -lnrnmech -Wl,-rpath,'$ORIGIN' -Wl,-rpath,/usr/lib -lreadline -lcurses -lform -lpython3.13 -lX11 -lXext make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64' Successfully created x86_64/special make[1]: warning: -j4 forced in submake: resetting jobserver mode. Translating StochKv.mod into /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64/StochKv.c Warning: bnl undefined. (declared within VERBATIM?) Warning: value undefined. (declared within VERBATIM?) Thread Safe Translating StochKv3.mod into /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/stochkv/x86_64/StochKv3.c Warning: bnl undefined. (declared within VERBATIM?) Warning: value undefined. (declared within VERBATIM?) Thread Safe cd examples/l5pc && nrnivmodl mechanisms /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc Mod files: "mechanisms/mechanisms/CaDynamics_E2.mod" "mechanisms/mechanisms/Ca_HVA.mod" "mechanisms/mechanisms/Ca_LVAst.mod" "mechanisms/mechanisms/Ih.mod" "mechanisms/mechanisms/Im.mod" "mechanisms/mechanisms/K_Pst.mod" "mechanisms/mechanisms/K_Tst.mod" "mechanisms/mechanisms/NaTa_t.mod" "mechanisms/mechanisms/NaTs2_t.mod" "mechanisms/mechanisms/Nap_Et2.mod" "mechanisms/mechanisms/SK_E2.mod" "mechanisms/mechanisms/SKv3_1.mod" Creating 'x86_64' directory for .o files. make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> NMODL ../mechanisms/Ca_HVA.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "Ca_HVA.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> NMODL ../mechanisms/CaDynamics_E2.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "CaDynamics_E2.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> NMODL ../mechanisms/Ca_LVAst.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "Ca_LVAst.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> NMODL ../mechanisms/Ih.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "Ih.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> NMODL ../mechanisms/Im.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "Im.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> NMODL ../mechanisms/K_Pst.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "K_Pst.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> NMODL ../mechanisms/K_Tst.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "K_Tst.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> NMODL ../mechanisms/NaTa_t.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "NaTa_t.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> NMODL ../mechanisms/NaTs2_t.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "NaTs2_t.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> NMODL ../mechanisms/Nap_Et2.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "Nap_Et2.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> NMODL ../mechanisms/SK_E2.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "SK_E2.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> NMODL ../mechanisms/SKv3_1.mod (cd "../mechanisms"; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl "SKv3_1.mod" -o "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64") make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> Compiling mod_func.cpp gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I. -I/usr/include -fPIC -c mod_func.cpp -o mod_func.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> Compiling Ca_HVA.c gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I"../mechanisms" -I. -I/usr/include -fPIC -c Ca_HVA.c -o Ca_HVA.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> Compiling CaDynamics_E2.c gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I"../mechanisms" -I. -I/usr/include -fPIC -c CaDynamics_E2.c -o CaDynamics_E2.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> Compiling Ca_LVAst.c gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I"../mechanisms" -I. -I/usr/include -fPIC -c Ca_LVAst.c -o Ca_LVAst.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> Compiling Im.c gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I"../mechanisms" -I. -I/usr/include -fPIC -c Im.c -o Im.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> Compiling Ih.c gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I"../mechanisms" -I. -I/usr/include -fPIC -c Ih.c -o Ih.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> Compiling K_Pst.c gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I"../mechanisms" -I. -I/usr/include -fPIC -c K_Pst.c -o K_Pst.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> Compiling K_Tst.c gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I"../mechanisms" -I. -I/usr/include -fPIC -c K_Tst.c -o K_Tst.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> Compiling NaTa_t.c gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I"../mechanisms" -I. -I/usr/include -fPIC -c NaTa_t.c -o NaTa_t.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> Compiling NaTs2_t.c gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I"../mechanisms" -I. -I/usr/include -fPIC -c NaTs2_t.c -o NaTs2_t.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> Compiling SK_E2.c gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I"../mechanisms" -I. -I/usr/include -fPIC -c SK_E2.c -o SK_E2.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> Compiling Nap_Et2.c gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I"../mechanisms" -I. -I/usr/include -fPIC -c Nap_Et2.c -o Nap_Et2.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' -> Compiling SKv3_1.c gcc -DHAVE_CONFIG_H -DPROTOTYPES_IN_STRUCT -I"../mechanisms" -I. -I/usr/include -fPIC -c SKv3_1.c -o SKv3_1.o make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' => LINKING shared library ./libnrnmech.so g++ -std=c++11 -shared -I /usr/include -o ./libnrnmech.so -Wl,-soname,libnrnmech.so \ ./mod_func.o ./CaDynamics_E2.o ./Ca_HVA.o ./Ca_LVAst.o ./Ih.o ./Im.o ./K_Pst.o ./K_Tst.o ./NaTa_t.o ./NaTs2_t.o ./Nap_Et2.o ./SK_E2.o ./SKv3_1.o -L/usr/lib -lnrniv -Wl,-rpath,/usr/lib -lreadline -lcurses -lform -lpython3.13 -lX11 -lXext rm -f ./.libs/libnrnmech.so ; mkdir -p ./.libs ; cp ./libnrnmech.so ./.libs/libnrnmech.so make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' make[1]: Entering directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' => LINKING executable ./special LDFLAGS are: -lreadline -lcurses -lform -lpython3.13 -lX11 -lXext g++ -std=c++11 -I /usr/include -I /usr/include/nrncvode -DAUTO_DLOPEN_NRNMECH=0 /usr/share/nrn/nrnmain.cpp -o ./special \ -L . -lnrnmech -L/usr/lib -lnrniv -lnrnmech -Wl,-rpath,'$ORIGIN' -Wl,-rpath,/usr/lib -lreadline -lcurses -lform -lpython3.13 -lX11 -lXext make[1]: Leaving directory '/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64' Successfully created x86_64/special make[1]: warning: -j4 forced in submake: resetting jobserver mode. Translating Ca_HVA.mod into /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64/Ca_HVA.c Thread Safe Translating CaDynamics_E2.mod into /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64/CaDynamics_E2.c Thread Safe Translating Ca_LVAst.mod into /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64/Ca_LVAst.c Thread Safe Translating Ih.mod into /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64/Ih.c Thread Safe Translating Im.mod into /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64/Im.c Thread Safe Translating K_Pst.mod into /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64/K_Pst.c Thread Safe Translating K_Tst.mod into /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64/K_Tst.c Thread Safe Translating NaTa_t.mod into /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64/NaTa_t.c Thread Safe Translating NaTs2_t.mod into /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64/NaTs2_t.c Thread Safe Translating Nap_Et2.mod into /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64/Nap_Et2.c Thread Safe Translating SK_E2.mod into /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64/SK_E2.c Thread Safe Translating SKv3_1.mod into /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/examples/l5pc/x86_64/SKv3_1.c Thread Safe cd examples/metaparameters && \ jupyter nbconvert --to python metaparameters.ipynb && \ sed '/get_ipython/d;/plt\./d;/plot_responses/d;/import matplotlib/d' metaparameters.py >metaparameters.tmp && \ mv metaparameters.tmp metaparameters.py [NbConvertApp] Converting notebook metaparameters.ipynb to python [NbConvertApp] Writing 9314 bytes to metaparameters.py cd examples/simplecell && \ jupyter nbconvert --to python simplecell.ipynb && \ sed '/get_ipython/d;/plt\./d;/plot_responses/d;/import matplotlib/d' simplecell.py >simplecell.tmp && \ mv simplecell.tmp simplecell.py && \ jupyter nbconvert --to python simplecell_arbor.ipynb && \ sed '/get_ipython/d;/plt\./d;/plot_responses/d;/import matplotlib/d' simplecell_arbor.py >simplecell_arbor.tmp && \ mv simplecell_arbor.tmp simplecell_arbor.py [NbConvertApp] Converting notebook simplecell.ipynb to python [NbConvertApp] Writing 10724 bytes to simplecell.py [NbConvertApp] Converting notebook simplecell_arbor.ipynb to python [NbConvertApp] Writing 10785 bytes to simplecell_arbor.py cd examples/l5pc && \ jupyter nbconvert --to python L5PC.ipynb && \ sed '/get_ipython/d;/plt\./d;/plot_responses/d;/import matplotlib/d;/neurom/d;/axes/d;/fig/d;/for index/d' L5PC.py >L5PC.tmp && \ mv L5PC.tmp L5PC.py && \ python3 l5pc_validate_neuron_arbor_pm.py --prepare-only --regions somatic --param-values ../../bluepyopt/tests/testdata/l5pc_validate_neuron_arbor/param_values.json && \ jupyter nbconvert --to python l5pc_validate_neuron_arbor_somatic.ipynb && \ sed '/get_ipython/d;/plt\./d;/import matplotlib/d;/from IPython.display/d;/multiprocessing/d;s/pool.map/map/g;s/# test_l5pc: insert //g;/# test_l5pc: skip/d' l5pc_validate_neuron_arbor_somatic.py >l5pc_validate_neuron_arbor_somatic.tmp && \ mv l5pc_validate_neuron_arbor_somatic.tmp l5pc_validate_neuron_arbor_somatic.py [NbConvertApp] Converting notebook L5PC.ipynb to python [NbConvertApp] Writing 9158 bytes to L5PC.py INFO:root:Outputting l5pc_validate_neuron_arbor notebook to ./l5pc_validate_neuron_arbor_somatic.ipynb with all local mechs/params... mechs = {'all': ['pas'], 'somatic': ['NaTs2_t', 'SKv3_1', 'SK_E2', 'CaDynamics_E2', 'Ca_HVA', 'Ca_LVAst', 'Ih']} extra_params = {'v_init': 'global', 'celsius': 'global', 'g_pas': ['all'], 'e_pas': ['all'], 'cm': ['all'], 'Ra': ['all'], 'ena': ['somatic'], 'ek': ['somatic']} INFO:papermill:Input Notebook: l5pc_validate_neuron_arbor.ipynb INFO:papermill:Output Notebook: ./l5pc_validate_neuron_arbor_somatic.ipynb [NbConvertApp] Converting notebook l5pc_validate_neuron_arbor_somatic.ipynb to python [NbConvertApp] Writing 24826 bytes to l5pc_validate_neuron_arbor_somatic.py + k='not test_metaparameter' + k='not test_metaparameter and not test_NrnRampPulse_instantiate' + k='not test_metaparameter and not test_NrnRampPulse_instantiate and not test_DEAPOptimisation_run' + k='not test_metaparameter and not test_NrnRampPulse_instantiate and not test_DEAPOptimisation_run and not test_DEAPOptimisation_run_from_parents' + k='not test_metaparameter and not test_NrnRampPulse_instantiate and not test_DEAPOptimisation_run and not test_DEAPOptimisation_run_from_parents and not test_optimisationsCMA_SO_run' + k='not test_metaparameter and not test_NrnRampPulse_instantiate and not test_DEAPOptimisation_run and not test_DEAPOptimisation_run_from_parents and not test_optimisationsCMA_SO_run and not test_optimisationsCMA_MO_run' + k='not test_metaparameter and not test_NrnRampPulse_instantiate and not test_DEAPOptimisation_run and not test_DEAPOptimisation_run_from_parents and not test_optimisationsCMA_SO_run and not test_optimisationsCMA_MO_run and not test_LFPySquarePulse_instantiate' + k='not test_metaparameter and not test_NrnRampPulse_instantiate and not test_DEAPOptimisation_run and not test_DEAPOptimisation_run_from_parents and not test_optimisationsCMA_SO_run and not test_optimisationsCMA_MO_run and not test_LFPySquarePulse_instantiate and not test_write_acc_expsyn' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/pytest bluepyopt/tests/ -v -m 'unit and not neuroml' '-k not test_metaparameter and not test_NrnRampPulse_instantiate and not test_DEAPOptimisation_run and not test_DEAPOptimisation_run_from_parents and not test_optimisationsCMA_SO_run and not test_optimisationsCMA_MO_run and not test_LFPySquarePulse_instantiate and not test_write_acc_expsyn' ============================= test session starts ============================== platform linux -- Python 3.13.3, pytest-8.3.5, pluggy-1.5.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3 configfile: pytest.ini collecting ... collected 183 items / 20 deselected / 163 selected bluepyopt/tests/test_bluepyopt.py::test_import PASSED [ 0%] bluepyopt/tests/test_deapext/test_algorithms.py::test_eaAlphaMuPlusLambdaCheckpoint PASSED [ 1%] bluepyopt/tests/test_deapext/test_algorithms.py::test_eaAlphaMuPlusLambdaCheckpoint_with_checkpoint PASSED [ 1%] bluepyopt/tests/test_deapext/test_hype.py::test_hypeIndicatorExact PASSED [ 2%] bluepyopt/tests/test_deapext/test_hype.py::test_hypeIndicatorSampled PASSED [ 3%] bluepyopt/tests/test_deapext/test_optimisations.py::test_DEAPOptimisation_constructor PASSED [ 3%] 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bluepyopt/tests/test_ephys/test_serializer.py::test_non_instantiable PASSED [ 83%] bluepyopt/tests/test_ephys/test_simulators.py::test_nrnsimulator_init PASSED [ 84%] bluepyopt/tests/test_ephys/test_simulators.py::test_nrnsimulator_init_windows PASSED [ 84%] bluepyopt/tests/test_ephys/test_simulators.py::test_nrnsimulator_cvode_minstep FAILED [ 85%] bluepyopt/tests/test_ephys/test_simulators.py::test_neuron_import PASSED [ 85%] bluepyopt/tests/test_ephys/test_simulators.py::test_nrnsim_run_dt_exception PASSED [ 86%] bluepyopt/tests/test_ephys/test_simulators.py::test_nrnsim_run_cvodeactive_dt_exception PASSED [ 87%] bluepyopt/tests/test_ephys/test_simulators.py::test_disable_banner_exception PASSED [ 87%] bluepyopt/tests/test_ephys/test_simulators.py::test_lfpysimulator_init PASSED [ 88%] bluepyopt/tests/test_ephys/test_simulators.py::test_lfpyimulator_init_windows PASSED [ 88%] bluepyopt/tests/test_ephys/test_simulators.py::test__lfpysimulator_neuron_import PASSED [ 89%] 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PASSED [ 96%] bluepyopt/tests/test_parameters.py::test_MetaListEqualParameter_init PASSED [ 97%] bluepyopt/tests/test_parameters.py::test_MetaListEqualParameter_freeze_unfreeze PASSED [ 98%] bluepyopt/tests/test_parameters.py::test_MetaListEqualParamete_str PASSED [ 98%] bluepyopt/tests/test_tools.py::test_load PASSED [ 99%] bluepyopt/tests/test_tools.py::test_uint32_seed PASSED [100%] =================================== FAILURES =================================== _______________ test_cell_model_write_and_read_acc_replace_axon ________________ @pytest.mark.unit def test_cell_model_write_and_read_acc_replace_axon(): """ephys.create_acc: Test write_acc and read_acc w/ axon replacement""" cell = make_cell(replace_axon=True) param_values = {"gnabar_hh": 0.1, "gkbar_hh": 0.03} with tempfile.TemporaryDirectory() as acc_dir: try: nrn_sim = ephys.simulators.NrnSimulator() > cell.write_acc(acc_dir, param_values, sim=nrn_sim) bluepyopt/tests/test_ephys/test_create_acc.py:583: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/models.py:424: in write_acc create_acc.write_acc(output_dir, self, param_values, bluepyopt/ephys/create_acc.py:878: in write_acc output = cell.create_acc( bluepyopt/ephys/models.py:398: in create_acc self.instantiate_morphology_3d(sim=sim) bluepyopt/ephys/models.py:250: in instantiate_morphology_3d self.instantiate_morphology(sim=sim) bluepyopt/ephys/models.py:241: in instantiate_morphology self.morphology.instantiate(sim=sim, icell=self.icell) bluepyopt/ephys/morphologies.py:158: in instantiate self.replace_axon(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ sim = icell = simple_ax2[0] @staticmethod def replace_axon(sim=None, icell=None): """Replace axon""" > nsec = len([sec for sec in icell.axonal]) E TypeError: Not an iterable HocObject bluepyopt/ephys/morphologies.py:178: TypeError During handling of the above exception, another exception occurred: @pytest.mark.unit def test_cell_model_write_and_read_acc_replace_axon(): """ephys.create_acc: Test write_acc and read_acc w/ axon replacement""" cell = make_cell(replace_axon=True) param_values = {"gnabar_hh": 0.1, "gkbar_hh": 0.03} with tempfile.TemporaryDirectory() as acc_dir: try: nrn_sim = ephys.simulators.NrnSimulator() cell.write_acc(acc_dir, param_values, sim=nrn_sim) except Exception as e: # fail with an older Arbor version > assert isinstance(e, NotImplementedError) E AssertionError: assert False E + where False = isinstance(TypeError('Not an iterable HocObject'), NotImplementedError) bluepyopt/tests/test_ephys/test_create_acc.py:585: AssertionError ____________________________ test_write_acc_simple _____________________________ @pytest.mark.unit def test_write_acc_simple(): SIMPLECELL_PATH = str( ( pathlib.Path(__file__).parent / "../../../examples/simplecell" ).resolve() ) sys.path.insert(0, SIMPLECELL_PATH) ref_dir = (testdata_dir / "acc/simplecell").resolve() old_cwd = os.getcwd() try: os.chdir(SIMPLECELL_PATH) import simplecell_model param_values = { "gnabar_hh": 0.10299326453483033, "gkbar_hh": 0.027124836082684685, } cell = simplecell_model.create(do_replace_axon=True) nrn_sim = ephys.simulators.NrnSimulator() > cell.instantiate_morphology_3d(nrn_sim) bluepyopt/tests/test_ephys/test_create_acc.py:691: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/models.py:250: in instantiate_morphology_3d self.instantiate_morphology(sim=sim) bluepyopt/ephys/models.py:241: in instantiate_morphology self.morphology.instantiate(sim=sim, icell=self.icell) bluepyopt/ephys/morphologies.py:158: in instantiate self.replace_axon(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ sim = icell = simple_cell[0] @staticmethod def replace_axon(sim=None, icell=None): """Replace axon""" > nsec = len([sec for sec in icell.axonal]) E TypeError: Not an iterable HocObject bluepyopt/ephys/morphologies.py:178: TypeError _____________________________ test_write_acc_l5pc ______________________________ @pytest.mark.unit def test_write_acc_l5pc(): L5PC_PATH = str( (pathlib.Path(__file__).parent / "../../../examples/l5pc").resolve() ) sys.path.insert(0, L5PC_PATH) ref_dir = (testdata_dir / "acc/l5pc").resolve() old_cwd = os.getcwd() try: import l5pc_model param_values = { "gNaTs2_tbar_NaTs2_t.apical": 0.026145, "gSKv3_1bar_SKv3_1.apical": 0.004226, "gImbar_Im.apical": 0.000143, "gNaTa_tbar_NaTa_t.axonal": 3.137968, "gK_Tstbar_K_Tst.axonal": 0.089259, "gamma_CaDynamics_E2.axonal": 0.002910, "gNap_Et2bar_Nap_Et2.axonal": 0.006827, "gSK_E2bar_SK_E2.axonal": 0.007104, "gCa_HVAbar_Ca_HVA.axonal": 0.000990, "gK_Pstbar_K_Pst.axonal": 0.973538, "gSKv3_1bar_SKv3_1.axonal": 1.021945, "decay_CaDynamics_E2.axonal": 287.198731, "gCa_LVAstbar_Ca_LVAst.axonal": 0.008752, "gamma_CaDynamics_E2.somatic": 0.000609, "gSKv3_1bar_SKv3_1.somatic": 0.303472, "gSK_E2bar_SK_E2.somatic": 0.008407, "gCa_HVAbar_Ca_HVA.somatic": 0.000994, "gNaTs2_tbar_NaTs2_t.somatic": 0.983955, "decay_CaDynamics_E2.somatic": 210.485284, "gCa_LVAstbar_Ca_LVAst.somatic": 0.000333, } cell = l5pc_model.create(do_replace_axon=True) nrn_sim = ephys.simulators.NrnSimulator() > cell.instantiate_morphology_3d(nrn_sim) bluepyopt/tests/test_ephys/test_create_acc.py:750: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/models.py:250: in instantiate_morphology_3d self.instantiate_morphology(sim=sim) bluepyopt/ephys/models.py:241: in instantiate_morphology self.morphology.instantiate(sim=sim, icell=self.icell) bluepyopt/ephys/morphologies.py:158: in instantiate self.replace_axon(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ sim = icell = l5pc[0] @staticmethod def replace_axon(sim=None, icell=None): """Replace axon""" > nsec = len([sec for sec in icell.axonal]) E TypeError: Not an iterable HocObject bluepyopt/ephys/morphologies.py:178: TypeError During handling of the above exception, another exception occurred: @pytest.mark.unit def test_write_acc_l5pc(): L5PC_PATH = str( (pathlib.Path(__file__).parent / "../../../examples/l5pc").resolve() ) sys.path.insert(0, L5PC_PATH) ref_dir = (testdata_dir / "acc/l5pc").resolve() old_cwd = os.getcwd() try: import l5pc_model param_values = { "gNaTs2_tbar_NaTs2_t.apical": 0.026145, "gSKv3_1bar_SKv3_1.apical": 0.004226, "gImbar_Im.apical": 0.000143, "gNaTa_tbar_NaTa_t.axonal": 3.137968, "gK_Tstbar_K_Tst.axonal": 0.089259, "gamma_CaDynamics_E2.axonal": 0.002910, "gNap_Et2bar_Nap_Et2.axonal": 0.006827, "gSK_E2bar_SK_E2.axonal": 0.007104, "gCa_HVAbar_Ca_HVA.axonal": 0.000990, "gK_Pstbar_K_Pst.axonal": 0.973538, "gSKv3_1bar_SKv3_1.axonal": 1.021945, "decay_CaDynamics_E2.axonal": 287.198731, "gCa_LVAstbar_Ca_LVAst.axonal": 0.008752, "gamma_CaDynamics_E2.somatic": 0.000609, "gSKv3_1bar_SKv3_1.somatic": 0.303472, "gSK_E2bar_SK_E2.somatic": 0.008407, "gCa_HVAbar_Ca_HVA.somatic": 0.000994, "gNaTs2_tbar_NaTs2_t.somatic": 0.983955, "decay_CaDynamics_E2.somatic": 210.485284, "gCa_LVAstbar_Ca_LVAst.somatic": 0.000333, } cell = l5pc_model.create(do_replace_axon=True) nrn_sim = ephys.simulators.NrnSimulator() cell.instantiate_morphology_3d(nrn_sim) with tempfile.TemporaryDirectory() as test_dir: cell.write_acc( test_dir, param_values, # ext_catalogues=ext_catalogues, create_mod_morph=True, ) check_acc_dir(test_dir, ref_dir) except Exception as e: # fail with an older Arbor version > assert isinstance(e, NotImplementedError) E AssertionError: assert False E + where False = isinstance(TypeError('Not an iterable HocObject'), NotImplementedError) bluepyopt/tests/test_ephys/test_create_acc.py:762: AssertionError _________________________ test_CellEvaluator_evaluate __________________________ pebble.common.types.RemoteTraceback: Traceback (most recent call last): File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/protocols.py", line 204, in _run_func cell_model.instantiate(sim=sim) ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/models.py", line 256, in instantiate self.instantiate_morphology(sim) ~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/models.py", line 241, in instantiate_morphology self.morphology.instantiate(sim=sim, icell=self.icell) ~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/morphologies.py", line 158, in instantiate self.replace_axon(sim=sim, icell=icell) ~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/morphologies.py", line 178, in replace_axon nsec = len([sec for sec in icell.axonal]) ^^^^^^^^^^^^ TypeError: Not an iterable HocObject The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/pebble/common/process.py", line 65, in process_execute return Result(ResultStatus.SUCCESS, function(*args, **kwargs)) ~~~~~~~~^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/protocols.py", line 239, in _run_func raise SweepProtocolException( 'Failed to run Neuron Sweep Protocol') from e bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol The above exception was the direct cause of the following exception: @pytest.mark.unit def test_CellEvaluator_evaluate(): """ephys.evaluators: Test CellEvaluator evaluate""" sim = ephys.simulators.NrnSimulator() simple_morph = ephys.morphologies.NrnFileMorphology( simple_morphology_path, do_replace_axon=True) all_loc = ephys.locations.NrnSeclistLocation('all', 'all') cm = ephys.parameters.NrnRangeParameter( name='cm', param_name='cm', bounds=[.5, 1.5], locations=[all_loc]) cell_model = ephys.models.CellModel('CellModel', morph=simple_morph, mechs=[], params=[cm]) soma_loc = ephys.locations.NrnSeclistCompLocation( name='soma_loc', seclist_name='somatic', sec_index=0, comp_x=.5) rec_soma = ephys.recordings.CompRecording( name='soma.v', location=soma_loc, variable='v') stim = ephys.stimuli.NrnSquarePulse( step_amplitude=0.1, step_delay=100.0, step_duration=100, total_duration=200, location=soma_loc) protocol = ephys.protocols.SweepProtocol( name='prot', stimuli=[stim], recordings=[rec_soma]) mean = -65 efeature = ephys.efeatures.eFELFeature(name='test_eFELFeature', efel_feature_name='voltage_base', recording_names={'': 'soma.v'}, stim_start=100.0, stim_end=200.0, exp_mean=-65, exp_std=1) s_obj = ephys.objectives.SingletonObjective( 'singleton', feature=efeature) fitness_calc = ephys.objectivescalculators.ObjectivesCalculator( objectives=[s_obj]) evaluator = ephys.evaluators.CellEvaluator( cell_model=cell_model, param_names=['cm'], fitness_calculator=fitness_calc, fitness_protocols={'sweep': protocol}, sim=sim) > responses = protocol.run(cell_model, {'cm': 1.0}, sim=sim) bluepyopt/tests/test_ephys/test_evaluators.py:113: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:189: in inner responses = func(self, cell_model, param_values, **kwargs) bluepyopt/ephys/protocols.py:294: in run responses = tasks.result() /usr/lib64/python3.13/concurrent/futures/_base.py:456: in result return self.__get_result() _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = None def __get_result(self): if self._exception: try: > raise self._exception E bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol /usr/lib64/python3.13/concurrent/futures/_base.py:401: SweepProtocolException _________________ TestNrnSeclistCompLocation.test_instantiate __________________ self = def test_instantiate(self): """ephys.locations.NrnSeclistCompLocation: test instantiate""" # Create a little test class with a soma and two dendritic sections class Cell(object): """Cell class""" pass cell = Cell() soma = self.sim.neuron.h.Section() dend1 = self.sim.neuron.h.Section(name="dend1") dend2 = self.sim.neuron.h.Section(name="dend2") cell.somatic = self.sim.neuron.h.SectionList() cell.somatic.append(soma) cell.basal = self.sim.neuron.h.SectionList() cell.basal.append(dend1) cell.basal.append(dend2) > soma_comp = self.loc.instantiate(sim=self.sim, icell=cell) bluepyopt/tests/test_ephys/test_locations.py:115: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = sim = icell = .Cell object at 0x7ff738f1c590> def instantiate(self, sim=None, icell=None): # pylint: disable=W0613 """Find the instantiate compartment""" iseclist = getattr(icell, self.seclist_name) > iseclist_size = len([x for x in iseclist]) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:98: TypeError ____________ TestNrnTrunkSomaDistanceCompLocation.test_instantiate _____________ self = def test_instantiate(self): """ephys.locations.NrnSomaDistanceCompLocation: test instantiate""" # Create a little test class with a soma and two dendritic sections class Cell(object): """Cell class""" pass cell = Cell() soma = self.sim.neuron.h.Section(name="soma[0]") cell.soma = [soma] cell.testdend = self.sim.neuron.h.SectionList() dend1 = self.sim.neuron.h.Section(name="dend[0]") dend2 = self.sim.neuron.h.Section(name="dend[1]") dend3 = self.sim.neuron.h.Section(name="dend[2]") dend4 = self.sim.neuron.h.Section(name="dend[3]") dend5 = self.sim.neuron.h.Section(name="dend[4]") cell.testdend.append(sec=dend1) cell.testdend.append(sec=dend2) cell.testdend.append(sec=dend3) cell.testdend.append(sec=dend4) cell.testdend.append(sec=dend5) x0 = self.sim.neuron.h.Vector([0] * 10) d = self.sim.neuron.h.Vector([1] * 10) x1 = self.sim.neuron.h.Vector(np.linspace(0, 100, 10)) self.sim.neuron.h.pt3dadd(x0, x1, x0, d, sec=dend1) x2 = self.sim.neuron.h.Vector(np.linspace(100, 200, 10)) self.sim.neuron.h.pt3dadd(x0, x2, x0, d, sec=dend2) x3 = self.sim.neuron.h.Vector(np.linspace(200, 300, 10)) self.sim.neuron.h.pt3dadd(x0, x3, x0, d, sec=dend3) x4 = self.sim.neuron.h.Vector(np.linspace(300, 400, 10)) self.sim.neuron.h.pt3dadd(x0, x4, x0, d, sec=dend4) x5 = self.sim.neuron.h.Vector(np.linspace(400, 500, 10)) self.sim.neuron.h.pt3dadd(x0, x5, x0, d, sec=dend5) dend1.connect(soma(0.5), 0.0) dend2.connect(dend1(1.0), 0.0) dend3.connect(dend1(1.0), 0.0) dend4.connect(dend3(1.0), 0.0) dend5.connect(dend4(1.0), 0.0) > comp = self.loc.instantiate(sim=self.sim, icell=cell) bluepyopt/tests/test_ephys/test_locations.py:325: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/locations.py:537: in instantiate self.set_sec_index(icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = icell = .Cell object at 0x7ff738751550> def set_sec_index(self, icell=None): """Search for the point furthest away along given direction.""" points = np.array( [ [ section.x3d(section.n3d() - 1), section.y3d(section.n3d() - 1), section.z3d(section.n3d() - 1), ] > for section in getattr(icell, self.seclist_name) ] ) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:521: TypeError ___________________________ test_nrnmod_instantiate ____________________________ @pytest.mark.unit def test_nrnmod_instantiate(): """ephys.mechanisms: Testing insert mechanism""" test_mech = ephys.mechanisms.NrnMODMechanism( 'test.pas', suffix='pas', locations=[simplecell.somatic_loc]) assert str(test_mech) == "test.pas: pas at ['somatic']" > simple_cell.instantiate(sim=sim) bluepyopt/tests/test_ephys/test_mechanisms.py:44: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/models.py:260: in instantiate mechanism.instantiate(sim=sim, icell=self.icell) bluepyopt/ephys/mechanisms.py:101: in instantiate for isec in isec_list: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ .0 = > return (isection for isection in isectionlist) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:243: TypeError ___________________________ test_nrnmod_determinism ____________________________ @pytest.mark.unit def test_nrnmod_determinism(): """ephys.mechanisms: Testing determinism""" test_mech = ephys.mechanisms.NrnMODMechanism( 'pas', suffix='pas', deterministic=False, locations=[simplecell.somatic_loc]) > simple_cell.instantiate(sim=sim) bluepyopt/tests/test_ephys/test_mechanisms.py:146: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/models.py:260: in instantiate mechanism.instantiate(sim=sim, icell=self.icell) bluepyopt/ephys/mechanisms.py:101: in instantiate for isec in isec_list: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ .0 = > return (isection for isection in isectionlist) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:243: TypeError __________________________ test_pprocess_instantiate ___________________________ @pytest.mark.unit def test_pprocess_instantiate(): """ephys.mechanisms: Testing insert point process""" test_pprocess = ephys.mechanisms.NrnMODPointProcessMechanism( name='expsyn', suffix='ExpSyn', locations=[simplecell.somacenter_loc]) assert ( str(test_pprocess) == "expsyn: ExpSyn at ['somatic[0](0.5)']") > simple_cell.instantiate(sim=sim) bluepyopt/tests/test_ephys/test_mechanisms.py:171: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/models.py:260: in instantiate mechanism.instantiate(sim=sim, icell=self.icell) bluepyopt/ephys/mechanisms.py:101: in instantiate for isec in isec_list: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ .0 = > return (isection for isection in isectionlist) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:243: TypeError _____________________ test_nrnfilemorphology_replace_axon ______________________ @pytest.mark.unit def test_nrnfilemorphology_replace_axon(): """ephys.morphologies: testing NrnFileMorphology replace_axon""" sim = ephys.simulators.NrnSimulator() morph = ephys.morphologies.NrnFileMorphology( simpleswc_morphpath, do_replace_axon=True) cell = ephys.models.CellModel(name='cell_replace') icell = cell.create_empty_cell( cell.name, sim=sim, seclist_names=cell.seclist_names, secarray_names=cell.secarray_names) > morph.instantiate(sim=sim, icell=icell) bluepyopt/tests/test_ephys/test_morphologies.py:69: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/morphologies.py:158: in instantiate self.replace_axon(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ sim = icell = cell_replace[0] @staticmethod def replace_axon(sim=None, icell=None): """Replace axon""" > nsec = len([sec for sec in icell.axonal]) E TypeError: Not an iterable HocObject bluepyopt/ephys/morphologies.py:178: TypeError ___________________ test_nrnfilemorphology_replace_axon_ax1 ____________________ @pytest.mark.unit def test_nrnfilemorphology_replace_axon_ax1(): """ephys.morphologies: testing NrnFileMorphology replace_axon with ax1""" sim = ephys.simulators.NrnSimulator() morph = ephys.morphologies.NrnFileMorphology( simpleswc_ax1_morphpath, do_replace_axon=True) cell = ephys.models.CellModel(name='cell_ax1') icell = cell.create_empty_cell( cell.name, sim=sim, seclist_names=cell.seclist_names, secarray_names=cell.secarray_names) > morph.instantiate(sim=sim, icell=icell) bluepyopt/tests/test_ephys/test_morphologies.py:93: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/morphologies.py:158: in instantiate self.replace_axon(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ sim = icell = cell_ax1[0] @staticmethod def replace_axon(sim=None, icell=None): """Replace axon""" > nsec = len([sec for sec in icell.axonal]) E TypeError: Not an iterable HocObject bluepyopt/ephys/morphologies.py:178: TypeError ___________________ test_nrnfilemorphology_replace_axon_ax2 ____________________ @pytest.mark.unit def test_nrnfilemorphology_replace_axon_ax2(): """ephys.morphologies: testing NrnFileMorphology replace_axon with ax2""" sim = ephys.simulators.NrnSimulator() morph = ephys.morphologies.NrnFileMorphology( simpleswc_ax2_morphpath, do_replace_axon=True) cell = ephys.models.CellModel(name='cell_ax2') icell = cell.create_empty_cell( cell.name, sim=sim, seclist_names=cell.seclist_names, secarray_names=cell.secarray_names) > morph.instantiate(sim=sim, icell=icell) bluepyopt/tests/test_ephys/test_morphologies.py:117: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/morphologies.py:158: in instantiate self.replace_axon(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ sim = icell = cell_ax2[0] @staticmethod def replace_axon(sim=None, icell=None): """Replace axon""" > nsec = len([sec for sec in icell.axonal]) E TypeError: Not an iterable HocObject bluepyopt/ephys/morphologies.py:178: TypeError ________________________ test_pprocessparam_instantiate ________________________ @pytest.mark.unit def test_pprocessparam_instantiate(): """ephys.parameters: Testing point process parameter""" simplecell = bluepyopt.ephys.examples.simplecell.SimpleCell() simple_cell = simplecell.cell_model simple_cell.freeze(simplecell.default_param_values) sim = simplecell.nrn_sim expsyn_mech = ephys.mechanisms.NrnMODPointProcessMechanism( name='expsyn', suffix='ExpSyn', locations=[simplecell.somacenter_loc]) expsyn_loc = ephys.locations.NrnPointProcessLocation( 'expsyn_loc', pprocess_mech=expsyn_mech) expsyn_tau_param = ephys.parameters.NrnPointProcessParameter( name='expsyn_tau', param_name='tau', value=2, locations=[expsyn_loc]) simple_cell.mechanisms.append(expsyn_mech) simple_cell.params[expsyn_tau_param.name] = expsyn_tau_param > simple_cell.instantiate(sim=sim) bluepyopt/tests/test_ephys/test_parameters.py:42: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/models.py:260: in instantiate mechanism.instantiate(sim=sim, icell=self.icell) bluepyopt/ephys/mechanisms.py:101: in instantiate for isec in isec_list: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ .0 = > return (isection for isection in isectionlist) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:243: TypeError ____________________________ test_distloc_exception ____________________________ pebble.common.types.RemoteTraceback: Traceback (most recent call last): File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/protocols.py", line 206, in _run_func self.instantiate(sim=sim, cell_model=cell_model) ~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/protocols.py", line 314, in instantiate stimulus.instantiate(sim=sim, icell=cell_model.icell) ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/stimuli.py", line 258, in instantiate icomp = self.location.instantiate(sim=sim, icell=icell) File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/locations.py", line 98, in instantiate iseclist_size = len([x for x in iseclist]) ^^^^^^^^ TypeError: Not an iterable HocObject The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/pebble/common/process.py", line 65, in process_execute return Result(ResultStatus.SUCCESS, function(*args, **kwargs)) ~~~~~~~~^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/protocols.py", line 239, in _run_func raise SweepProtocolException( 'Failed to run Neuron Sweep Protocol') from e bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol The above exception was the direct cause of the following exception: @pytest.mark.unit def test_distloc_exception(): """ephys.protocols: test if protocol raise dist loc exception""" nrn_sim = ephys.simulators.NrnSimulator() dummy_cell = dummycells.DummyCellModel1() # icell = dummy_cell.instantiate(sim=nrn_sim) soma_loc = ephys.locations.NrnSeclistCompLocation( name='soma_loc', seclist_name='somatic', sec_index=0, comp_x=.5) dend_loc = ephys.locations.NrnSomaDistanceCompLocation( name='dend_loc', soma_distance=800, seclist_name='apical') rec_soma = ephys.recordings.CompRecording( name='soma.v', location=soma_loc, variable='v') rec_dend = ephys.recordings.CompRecording( name='dend.v', location=dend_loc, variable='v') stim = ephys.stimuli.NrnSquarePulse( step_amplitude=0.0, step_delay=0.0, step_duration=50, total_duration=50, location=soma_loc) protocol = ephys.protocols.SweepProtocol( name='prot', stimuli=[stim], recordings=[ rec_soma, rec_dend]) > responses = protocol.run( cell_model=dummy_cell, param_values={}, sim=nrn_sim) bluepyopt/tests/test_ephys/test_protocols.py:71: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:189: in inner responses = func(self, cell_model, param_values, **kwargs) bluepyopt/ephys/protocols.py:294: in run responses = tasks.result() /usr/lib64/python3.13/concurrent/futures/_base.py:456: in result return self.__get_result() _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = None def __get_result(self): if self._exception: try: > raise self._exception E bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol /usr/lib64/python3.13/concurrent/futures/_base.py:401: SweepProtocolException __________________________ test_sequenceprotocol_run ___________________________ pebble.common.types.RemoteTraceback: Traceback (most recent call last): File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/protocols.py", line 206, in _run_func self.instantiate(sim=sim, cell_model=cell_model) ~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/protocols.py", line 314, in instantiate stimulus.instantiate(sim=sim, icell=cell_model.icell) ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/stimuli.py", line 258, in instantiate icomp = self.location.instantiate(sim=sim, icell=icell) File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/locations.py", line 98, in instantiate iseclist_size = len([x for x in iseclist]) ^^^^^^^^ TypeError: Not an iterable HocObject The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/pebble/common/process.py", line 65, in process_execute return Result(ResultStatus.SUCCESS, function(*args, **kwargs)) ~~~~~~~~^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/protocols.py", line 239, in _run_func raise SweepProtocolException( 'Failed to run Neuron Sweep Protocol') from e bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol The above exception was the direct cause of the following exception: @pytest.mark.unit def test_sequenceprotocol_run(): """ephys.protocols: Test SequenceProtocol run""" nrn_sim = ephys.simulators.NrnSimulator() dummy_cell = dummycells.DummyCellModel1() # icell = dummy_cell.instantiate(sim=nrn_sim) soma_loc = ephys.locations.NrnSeclistCompLocation( name='soma_loc', seclist_name='somatic', sec_index=0, comp_x=.5) rec_soma = ephys.recordings.CompRecording( name='soma.v', location=soma_loc, variable='v') stim = ephys.stimuli.NrnSquarePulse( step_amplitude=0.0, step_delay=0.0, step_duration=50, total_duration=50, location=soma_loc) sweep_protocol = ephys.protocols.SweepProtocol( name='sweep_prot', stimuli=[stim], recordings=[rec_soma]) seq_protocol = ephys.protocols.SequenceProtocol( name='seq_prot', protocols=[sweep_protocol]) > responses = seq_protocol.run( cell_model=dummy_cell, param_values={}, sim=nrn_sim) bluepyopt/tests/test_ephys/test_protocols.py:221: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:89: in run response = protocol.run( bluepyopt/ephys/protocols.py:189: in inner responses = func(self, cell_model, param_values, **kwargs) bluepyopt/ephys/protocols.py:294: in run responses = tasks.result() /usr/lib64/python3.13/concurrent/futures/_base.py:456: in result return self.__get_result() _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = None def __get_result(self): if self._exception: try: > raise self._exception E bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol /usr/lib64/python3.13/concurrent/futures/_base.py:401: SweepProtocolException ______________________ test_sweepprotocol_run_unisolated _______________________ self = cell_model = param_values = {} sim = def _run_func(self, cell_model, param_values, sim=None): """Run protocols""" try: cell_model.freeze(param_values) cell_model.instantiate(sim=sim) > self.instantiate(sim=sim, cell_model=cell_model) bluepyopt/ephys/protocols.py:206: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:314: in instantiate stimulus.instantiate(sim=sim, icell=cell_model.icell) bluepyopt/ephys/stimuli.py:258: in instantiate icomp = self.location.instantiate(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = sim = icell = .Cell object at 0x7ff733b886e0> def instantiate(self, sim=None, icell=None): # pylint: disable=W0613 """Find the instantiate compartment""" iseclist = getattr(icell, self.seclist_name) > iseclist_size = len([x for x in iseclist]) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:98: TypeError The above exception was the direct cause of the following exception: @pytest.mark.unit def test_sweepprotocol_run_unisolated(): """ephys.protocols: Test SweepProtocol unisolated run""" nrn_sim = ephys.simulators.NrnSimulator() dummy_cell = dummycells.DummyCellModel1() # icell = dummy_cell.instantiate(sim=nrn_sim) soma_loc = ephys.locations.NrnSeclistCompLocation( name='soma_loc', seclist_name='somatic', sec_index=0, comp_x=.5) unknown_loc = ephys.locations.NrnSomaDistanceCompLocation( name='unknown_loc', seclist_name='somatic', soma_distance=100) rec_soma = ephys.recordings.CompRecording( name='soma.v', location=soma_loc, variable='v') rec_unknown = ephys.recordings.CompRecording( name='unknown.v', location=unknown_loc, variable='v') stim = ephys.stimuli.NrnSquarePulse( step_amplitude=0.0, step_delay=0.0, step_duration=50, total_duration=50, location=soma_loc) protocol = ephys.protocols.SweepProtocol( name='prot', stimuli=[stim], recordings=[rec_soma, rec_unknown]) > responses = protocol.run( cell_model=dummy_cell, param_values={}, sim=nrn_sim, isolate=False) bluepyopt/tests/test_ephys/test_protocols.py:354: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:189: in inner responses = func(self, cell_model, param_values, **kwargs) bluepyopt/ephys/protocols.py:302: in run responses = self._run_func(cell_model=cell_model, _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = cell_model = param_values = {} sim = def _run_func(self, cell_model, param_values, sim=None): """Run protocols""" try: cell_model.freeze(param_values) cell_model.instantiate(sim=sim) self.instantiate(sim=sim, cell_model=cell_model) try: if isinstance(sim, LFPySimulator): sim.run( lfpy_cell=cell_model.lfpy_cell, lfpy_electrode=cell_model.lfpy_electrode, tstop=self.total_duration, cvode_active=self.cvode_active) else: sim.run( self.total_duration, cvode_active=self.cvode_active ) except (RuntimeError, simulators.NrnSimulatorException): logger.debug( 'SweepProtocol: Running of parameter set {%s} generated ' 'an exception, returning None in responses', str(param_values)) responses = {recording.name: None for recording in self.recordings} else: responses = { recording.name: recording.response for recording in self.recordings} self.destroy(sim=sim) cell_model.destroy(sim=sim) cell_model.unfreeze(param_values.keys()) return responses except BaseException as e: > raise SweepProtocolException( 'Failed to run Neuron Sweep Protocol') from e E bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol bluepyopt/ephys/protocols.py:239: SweepProtocolException _______________________ test_sweepprotocol_run_isolated ________________________ pebble.common.types.RemoteTraceback: Traceback (most recent call last): File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/protocols.py", line 206, in _run_func self.instantiate(sim=sim, cell_model=cell_model) ~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/protocols.py", line 314, in instantiate stimulus.instantiate(sim=sim, icell=cell_model.icell) ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/stimuli.py", line 258, in instantiate icomp = self.location.instantiate(sim=sim, icell=icell) File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/locations.py", line 98, in instantiate iseclist_size = len([x for x in iseclist]) ^^^^^^^^ TypeError: Not an iterable HocObject The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/pebble/common/process.py", line 65, in process_execute return Result(ResultStatus.SUCCESS, function(*args, **kwargs)) ~~~~~~~~^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/protocols.py", line 239, in _run_func raise SweepProtocolException( 'Failed to run Neuron Sweep Protocol') from e bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol The above exception was the direct cause of the following exception: @pytest.mark.unit def test_sweepprotocol_run_isolated(): """ephys.protocols: Test SweepProtocol isolated run""" nrn_sim = ephys.simulators.NrnSimulator(dt=0.1) dummy_cell = dummycells.DummyCellModel1() soma_loc = ephys.locations.NrnSeclistCompLocation( name='soma_loc', seclist_name='somatic', sec_index=0, comp_x=.5) unknown_loc = ephys.locations.NrnSomaDistanceCompLocation( name='unknown_loc', seclist_name='somatic', soma_distance=100) rec_soma = ephys.recordings.CompRecording( name='soma.v', location=soma_loc, variable='v') rec_unknown = ephys.recordings.CompRecording( name='unknown.v', location=unknown_loc, variable='v') stim = ephys.stimuli.NrnSquarePulse( step_amplitude=0.0, step_delay=0.0, step_duration=50, total_duration=50, location=soma_loc) protocol = ephys.protocols.SweepProtocol( name='prot', stimuli=[stim], recordings=[rec_soma, rec_unknown]) > responses = protocol.run( cell_model=dummy_cell, param_values={}, sim=nrn_sim, isolate=True) bluepyopt/tests/test_ephys/test_protocols.py:405: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:189: in inner responses = func(self, cell_model, param_values, **kwargs) bluepyopt/ephys/protocols.py:294: in run responses = tasks.result() /usr/lib64/python3.13/concurrent/futures/_base.py:456: in result return self.__get_result() _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = None def __get_result(self): if self._exception: try: > raise self._exception E bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol /usr/lib64/python3.13/concurrent/futures/_base.py:401: SweepProtocolException _________________________ test_nrnsimulator_exception __________________________ self = cell_model = param_values = {} sim = def _run_func(self, cell_model, param_values, sim=None): """Run protocols""" try: cell_model.freeze(param_values) cell_model.instantiate(sim=sim) > self.instantiate(sim=sim, cell_model=cell_model) bluepyopt/ephys/protocols.py:206: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:314: in instantiate stimulus.instantiate(sim=sim, icell=cell_model.icell) bluepyopt/ephys/stimuli.py:258: in instantiate icomp = self.location.instantiate(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = sim = icell = .Cell object at 0x7ff738751a90> def instantiate(self, sim=None, icell=None): # pylint: disable=W0613 """Find the instantiate compartment""" iseclist = getattr(icell, self.seclist_name) > iseclist_size = len([x for x in iseclist]) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:98: TypeError The above exception was the direct cause of the following exception: @pytest.mark.unit def test_nrnsimulator_exception(): """ephys.protocols: test if protocol raise nrn sim exception""" nrn_sim = ephys.simulators.NrnSimulator() dummy_cell = dummycells.DummyCellModel1() soma_loc = ephys.locations.NrnSeclistCompLocation( name='soma_loc', seclist_name='somatic', sec_index=0, comp_x=.5) rec_soma = ephys.recordings.CompRecording( name='soma.v', location=soma_loc, variable='v') stim = ephys.stimuli.NrnSquarePulse( step_amplitude=0.0, step_delay=0.0, step_duration=50, total_duration=50, location=soma_loc) protocol = ephys.protocols.SweepProtocol( name='prot', stimuli=[stim], recordings=[rec_soma]) nrn_sim.run = run_RuntimeError > responses = protocol.run( cell_model=dummy_cell, param_values={}, sim=nrn_sim, isolate=False) bluepyopt/tests/test_ephys/test_protocols.py:450: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/protocols.py:189: in inner responses = func(self, cell_model, param_values, **kwargs) bluepyopt/ephys/protocols.py:302: in run responses = self._run_func(cell_model=cell_model, _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = cell_model = param_values = {} sim = def _run_func(self, cell_model, param_values, sim=None): """Run protocols""" try: cell_model.freeze(param_values) cell_model.instantiate(sim=sim) self.instantiate(sim=sim, cell_model=cell_model) try: if isinstance(sim, LFPySimulator): sim.run( lfpy_cell=cell_model.lfpy_cell, lfpy_electrode=cell_model.lfpy_electrode, tstop=self.total_duration, cvode_active=self.cvode_active) else: sim.run( self.total_duration, cvode_active=self.cvode_active ) except (RuntimeError, simulators.NrnSimulatorException): logger.debug( 'SweepProtocol: Running of parameter set {%s} generated ' 'an exception, returning None in responses', str(param_values)) responses = {recording.name: None for recording in self.recordings} else: responses = { recording.name: recording.response for recording in self.recordings} self.destroy(sim=sim) cell_model.destroy(sim=sim) cell_model.unfreeze(param_values.keys()) return responses except BaseException as e: > raise SweepProtocolException( 'Failed to run Neuron Sweep Protocol') from e E bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol bluepyopt/ephys/protocols.py:239: SweepProtocolException _______________________ test_nrnsimulator_cvode_minstep ________________________ pebble.common.types.RemoteTraceback: Traceback (most recent call last): File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/protocols.py", line 204, in _run_func cell_model.instantiate(sim=sim) ~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/models.py", line 260, in instantiate mechanism.instantiate(sim=sim, icell=self.icell) ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/mechanisms.py", line 101, in instantiate for isec in isec_list: ^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/locations.py", line 243, in return (isection for isection in isectionlist) ^^^^^^^^^^^^ TypeError: Not an iterable HocObject The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/pebble/common/process.py", line 65, in process_execute return Result(ResultStatus.SUCCESS, function(*args, **kwargs)) ~~~~~~~~^^^^^^^^^^^^^^^^^ File "/builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/ephys/protocols.py", line 239, in _run_func raise SweepProtocolException( 'Failed to run Neuron Sweep Protocol') from e bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol The above exception was the direct cause of the following exception: @pytest.mark.unit def test_nrnsimulator_cvode_minstep(): """ephys.simulators: test if NrnSimulator constructor works""" # Check with minstep specified neuron_sim = ephys.simulators.NrnSimulator() assert neuron_sim.cvode.minstep() == 0.0 assert neuron_sim.cvode_minstep == 0.0 # Check default minstep before and after run neuron_sim = ephys.simulators.NrnSimulator(cvode_minstep=0.01) assert neuron_sim.cvode.minstep() == 0.0 neuron_sim.run(tstop=10) assert neuron_sim.cvode.minstep() == 0.0 # Check with that minstep is set back to the original value after run neuron_sim = ephys.simulators.NrnSimulator(cvode_minstep=0.0) neuron_sim.cvode_minstep = 0.05 assert neuron_sim.cvode.minstep() == 0.05 neuron_sim.run(tstop=10) assert neuron_sim.cvode.minstep() == 0.05 # Check that the minstep is effective cvode_minstep = 0.012 params = { "gnabar_hh": 0.10299326453483033, "gkbar_hh": 0.027124836082684685, } simplecell = examples.simplecell.SimpleCell() evaluator = simplecell.cell_evaluator evaluator.cell_model.unfreeze(params.keys()) evaluator.sim = ephys.simulators.NrnSimulator(cvode_minstep=cvode_minstep) > responses = evaluator.run_protocols( protocols=evaluator.fitness_protocols.values(), param_values=params ) bluepyopt/tests/test_ephys/test_simulators.py:92: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/evaluators.py:177: in run_protocols responses.update(self.run_protocol( bluepyopt/ephys/evaluators.py:155: in run_protocol return protocol.run( bluepyopt/ephys/protocols.py:189: in inner responses = func(self, cell_model, param_values, **kwargs) bluepyopt/ephys/protocols.py:294: in run responses = tasks.result() /usr/lib64/python3.13/concurrent/futures/_base.py:456: in result return self.__get_result() _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = None def __get_result(self): if self._exception: try: > raise self._exception E bluepyopt.ephys.protocols.SweepProtocolException: Failed to run Neuron Sweep Protocol /usr/lib64/python3.13/concurrent/futures/_base.py:401: SweepProtocolException _____________________ test_NrnNetStimStimulus_instantiate ______________________ @pytest.mark.unit def test_NrnNetStimStimulus_instantiate(): """ephys.stimuli: test if NrnNetStimStimulus instantiate works""" nrn_sim = ephys.simulators.NrnSimulator() dummy_cell = dummycells.DummyCellModel1() icell = dummy_cell.instantiate(sim=nrn_sim) somacenter_loc = ephys.locations.NrnSeclistCompLocation( name=None, seclist_name='somatic', sec_index=0, comp_x=.5) expsyn_mech = ephys.mechanisms.NrnMODPointProcessMechanism( name='expsyn', suffix='ExpSyn', locations=[somacenter_loc]) > expsyn_mech.instantiate(sim=nrn_sim, icell=icell) bluepyopt/tests/test_ephys/test_stimuli.py:73: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/mechanisms.py:308: in instantiate icomp = location.instantiate(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = sim = icell = .Cell object at 0x7ff733b88ad0> def instantiate(self, sim=None, icell=None): # pylint: disable=W0613 """Find the instantiate compartment""" iseclist = getattr(icell, self.seclist_name) > iseclist_size = len([x for x in iseclist]) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:98: TypeError ___________________ test_NrnCurrentPlayStimulus_instantiate ____________________ @pytest.mark.unit def test_NrnCurrentPlayStimulus_instantiate(): """ephys.stimuli: test if NrnNetStimStimulus instantiate works""" nrn_sim = ephys.simulators.NrnSimulator() dummy_cell = dummycells.DummyCellModel1() icell = dummy_cell.instantiate(sim=nrn_sim) somacenter_loc = ephys.locations.NrnSeclistCompLocation( name=None, seclist_name='somatic', sec_index=0, comp_x=.5) time_points = [10, 50] current_points = [0.1, 0.2] current_stim = ephys.stimuli.NrnCurrentPlayStimulus( time_points=time_points, current_points=current_points, location=somacenter_loc) assert current_stim.time_points == time_points assert current_stim.current_points == current_points assert str(current_stim) == 'Current play at somatic[0](0.5)' > current_stim.instantiate(sim=nrn_sim, icell=icell) bluepyopt/tests/test_ephys/test_stimuli.py:120: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ bluepyopt/ephys/stimuli.py:88: in instantiate icomp = self.location.instantiate(sim=sim, icell=icell) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = sim = icell = .Cell object at 0x7ff738751a90> def instantiate(self, sim=None, icell=None): # pylint: disable=W0613 """Find the instantiate compartment""" iseclist = getattr(icell, self.seclist_name) > iseclist_size = len([x for x in iseclist]) E TypeError: Not an iterable HocObject bluepyopt/ephys/locations.py:98: TypeError =============================== warnings summary =============================== bluepyopt/tests/test_deapext/test_hype.py::test_hypeIndicatorExact /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/deapext/hype.py:71: RuntimeWarning: divide by zero encountered in divide alpha.append(numpy.prod((k - j) / (Ps - j) / i)) bluepyopt/tests/test_deapext/test_hype.py::test_hypeIndicatorSampled /builddir/build/BUILD/python-bluepyopt-1.14.13-build/BluePyOpt-4fcf47a075ecbe2aa967040d297d0131339a75e3/bluepyopt/deapext/hype.py:101: RuntimeWarning: divide by zero encountered in divide alpha.append(numpy.prod((k - j) / (nrP - j) / i)) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========================== short test summary info ============================ FAILED bluepyopt/tests/test_ephys/test_create_acc.py::test_cell_model_write_and_read_acc_replace_axon FAILED bluepyopt/tests/test_ephys/test_create_acc.py::test_write_acc_simple FAILED bluepyopt/tests/test_ephys/test_create_acc.py::test_write_acc_l5pc - A... FAILED bluepyopt/tests/test_ephys/test_evaluators.py::test_CellEvaluator_evaluate FAILED bluepyopt/tests/test_ephys/test_locations.py::TestNrnSeclistCompLocation::test_instantiate FAILED bluepyopt/tests/test_ephys/test_locations.py::TestNrnTrunkSomaDistanceCompLocation::test_instantiate FAILED bluepyopt/tests/test_ephys/test_mechanisms.py::test_nrnmod_instantiate FAILED bluepyopt/tests/test_ephys/test_mechanisms.py::test_nrnmod_determinism FAILED bluepyopt/tests/test_ephys/test_mechanisms.py::test_pprocess_instantiate FAILED bluepyopt/tests/test_ephys/test_morphologies.py::test_nrnfilemorphology_replace_axon FAILED bluepyopt/tests/test_ephys/test_morphologies.py::test_nrnfilemorphology_replace_axon_ax1 FAILED bluepyopt/tests/test_ephys/test_morphologies.py::test_nrnfilemorphology_replace_axon_ax2 FAILED bluepyopt/tests/test_ephys/test_parameters.py::test_pprocessparam_instantiate FAILED bluepyopt/tests/test_ephys/test_protocols.py::test_distloc_exception FAILED bluepyopt/tests/test_ephys/test_protocols.py::test_sequenceprotocol_run FAILED bluepyopt/tests/test_ephys/test_protocols.py::test_sweepprotocol_run_unisolated FAILED bluepyopt/tests/test_ephys/test_protocols.py::test_sweepprotocol_run_isolated FAILED bluepyopt/tests/test_ephys/test_protocols.py::test_nrnsimulator_exception FAILED bluepyopt/tests/test_ephys/test_simulators.py::test_nrnsimulator_cvode_minstep FAILED bluepyopt/tests/test_ephys/test_stimuli.py::test_NrnNetStimStimulus_instantiate FAILED bluepyopt/tests/test_ephys/test_stimuli.py::test_NrnCurrentPlayStimulus_instantiate ========== 21 failed, 142 passed, 20 deselected, 2 warnings in 5.87s =========== RPM build errors: error: Bad exit status from /var/tmp/rpm-tmp.6xludu (%check) Bad exit status from /var/tmp/rpm-tmp.6xludu (%check) Finish: rpmbuild python-bluepyopt-1.14.13-2.fc43.src.rpm Finish: build phase for python-bluepyopt-1.14.13-2.fc43.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1745908671.429902/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names ERROR: Exception(/var/lib/copr-rpmbuild/results/python-bluepyopt-1.14.13-2.fc43.src.rpm) Config(fedora-rawhide-x86_64) 0 minutes 30 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_failure=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot ERROR: Command failed: # /usr/bin/systemd-nspawn -q -M fe71108579754691b4c4cedf20ecd015 -D /var/lib/mock/fedora-rawhide-x86_64-1745908671.429902/root -a -u mockbuild --capability=cap_ipc_lock --rlimit=RLIMIT_NOFILE=10240 --capability=cap_ipc_lock --bind=/tmp/mock-resolv.wfz6roe1:/etc/resolv.conf --bind=/dev/btrfs-control --bind=/dev/mapper/control --bind=/dev/fuse --bind=/dev/loop-control --bind=/dev/loop0 --bind=/dev/loop1 --bind=/dev/loop2 --bind=/dev/loop3 --bind=/dev/loop4 --bind=/dev/loop5 --bind=/dev/loop6 --bind=/dev/loop7 --bind=/dev/loop8 --bind=/dev/loop9 --bind=/dev/loop10 --bind=/dev/loop11 --console=pipe --setenv=TERM=vt100 --setenv=SHELL=/bin/bash --setenv=HOME=/builddir --setenv=HOSTNAME=mock --setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin '--setenv=PROMPT_COMMAND=printf "\033]0;\007"' '--setenv=PS1= \s-\v\$ ' --setenv=LANG=C.UTF-8 --resolv-conf=off bash --login -c '/usr/bin/rpmbuild -ba --noprep --target x86_64 /builddir/build/originals/python-bluepyopt.spec' Copr build error: Build failed