Warning: Permanently added '3.236.210.168' (ED25519) to the list of known hosts.

You can reproduce this build on your computer by running:

  sudo dnf install copr-rpmbuild
  /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6537568-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64


Version: 0.69
PID: 9405
Logging PID: 9406
Task:
{'appstream': False,
 'background': False,
 'build_id': 6537568,
 'buildroot_pkgs': [],
 'chroot': 'fedora-rawhide-x86_64',
 'enable_net': False,
 'fedora_review': False,
 'git_hash': '2a598d90c81bdc23acce594979f2a16f21823777',
 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/thrnciar/python-requests-80586075/bout++',
 'isolation': 'default',
 'memory_reqs': 2048,
 'package_name': 'bout++',
 'package_version': '5.0.0-11',
 'project_dirname': 'python-requests-80586075',
 'project_name': 'python-requests-80586075',
 'project_owner': 'thrnciar',
 'repo_priority': None,
 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/thrnciar/python-requests-80586075/fedora-rawhide-x86_64/',
            'id': 'copr_base',
            'name': 'Copr repository',
            'priority': None}],
 'sandbox': 'thrnciar/python-requests-80586075--thrnciar',
 'source_json': {},
 'source_type': None,
 'submitter': 'thrnciar',
 'tags': [],
 'task_id': '6537568-fedora-rawhide-x86_64',
 'timeout': 18000,
 'uses_devel_repo': False,
 'with_opts': [],
 'without_opts': []}

Running: git clone https://copr-dist-git.fedorainfracloud.org/git/thrnciar/python-requests-80586075/bout++ /var/lib/copr-rpmbuild/workspace/workdir-wsl3x2cz/bout++ --depth 500 --no-single-branch --recursive

cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/thrnciar/python-requests-80586075/bout++', '/var/lib/copr-rpmbuild/workspace/workdir-wsl3x2cz/bout++', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout: 
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-wsl3x2cz/bout++'...

Running: git checkout 2a598d90c81bdc23acce594979f2a16f21823777 --

cmd: ['git', 'checkout', '2a598d90c81bdc23acce594979f2a16f21823777', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-wsl3x2cz/bout++
rc: 0
stdout: 
stderr: Note: switching to '2a598d90c81bdc23acce594979f2a16f21823777'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at 2a598d9 automatic import of bout++

Running: copr-distgit-client sources

/usr/bin/tail: cmd: ['copr-distgit-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-wsl3x2cz/bout++
rc: 0
stdout: 
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading BOUT++-v5.0.0.tar.gz
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -o BOUT++-v5.0.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/thrnciar/python-requests-80586075/bout++/BOUT++-v5.0.0.tar.gz/md5/a7d6a9f9f2334e1956b9ba0e4430e0ae/BOUT++-v5.0.0.tar.gz
/var/lib/copr-rpmbuild/main.log: file truncated
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100 40.8M  100 40.8M    0     0  42.0M      0 --:--:-- --:--:-- --:--:-- 42.0M
INFO: Reading stdout from command: md5sum BOUT++-v5.0.0.tar.gz

Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-wsl3x2cz/bout++/bout++.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-wsl3x2cz/bout++ --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1697538015.619643 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 5.2 starting (python version = 3.11.3, NVR = mock-5.2-1.fc38), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-wsl3x2cz/bout++/bout++.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-wsl3x2cz/bout++ --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1697538015.619643 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-wsl3x2cz/bout++/bout++.spec)  Config(fedora-rawhide-x86_64)
Start: clean chroot
Finish: clean chroot
Mock Version: 5.2
INFO: Mock Version: 5.2
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1697538015.619643/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: Guessed host environment type: unknown
INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide
INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide
INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1697538015.619643/root
INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture
INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount
INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/efc74c25f3b7f326dc6dda95cacd11f7f14bcd52f291c2e191b36470ebb1f83f/merged
INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/efc74c25f3b7f326dc6dda95cacd11f7f14bcd52f291c2e191b36470ebb1f83f/merged) with podman image umount
INFO: Package manager dnf detected and used (fallback)
INFO: Bootstrap image not marked ready
Start(bootstrap): installing dnf tooling
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository                                 1.6 MB/s |  66 kB     00:00    
fedora                                           49 MB/s |  73 MB     00:01    
Package python3-dnf-4.17.0-6.fc40.noarch is already installed.
Dependencies resolved.
================================================================================
 Package                      Arch       Version               Repository  Size
================================================================================
Installing:
 python3-dnf-plugins-core     noarch     4.4.3-1.fc40          fedora     317 k
Installing dependencies:
 dbus-libs                    x86_64     1:1.14.10-1.fc40      fedora     155 k
 python3-dateutil             noarch     1:2.8.2-10.fc39       fedora     355 k
 python3-dbus                 x86_64     1.3.2-4.fc39          fedora     157 k
 python3-distro               noarch     1.8.0-6.fc39          fedora      49 k
 python3-six                  noarch     1.16.0-12.fc39        fedora      41 k
 python3-systemd              x86_64     235-5.fc39            fedora     107 k

Transaction Summary
================================================================================
Install  7 Packages

Total download size: 1.2 M
Installed size: 3.6 M
Downloading Packages:
(1/7): python3-dateutil-2.8.2-10.fc39.noarch.rp  18 MB/s | 355 kB     00:00    
(2/7): dbus-libs-1.14.10-1.fc40.x86_64.rpm      7.2 MB/s | 155 kB     00:00    
(3/7): python3-distro-1.8.0-6.fc39.noarch.rpm    29 MB/s |  49 kB     00:00    
(4/7): python3-dbus-1.3.2-4.fc39.x86_64.rpm     6.8 MB/s | 157 kB     00:00    
(5/7): python3-dnf-plugins-core-4.4.3-1.fc40.no  92 MB/s | 317 kB     00:00    
(6/7): python3-six-1.16.0-12.fc39.noarch.rpm     13 MB/s |  41 kB     00:00    
(7/7): python3-systemd-235-5.fc39.x86_64.rpm     36 MB/s | 107 kB     00:00    
--------------------------------------------------------------------------------
Total                                            13 MB/s | 1.2 MB     00:00     
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Preparing        :                                                        1/1 
  Installing       : python3-systemd-235-5.fc39.x86_64                      1/7 
  Installing       : python3-six-1.16.0-12.fc39.noarch                      2/7 
  Installing       : python3-dateutil-1:2.8.2-10.fc39.noarch                3/7 
  Installing       : python3-distro-1.8.0-6.fc39.noarch                     4/7 
  Installing       : dbus-libs-1:1.14.10-1.fc40.x86_64                      5/7 
  Installing       : python3-dbus-1.3.2-4.fc39.x86_64                       6/7 
  Installing       : python3-dnf-plugins-core-4.4.3-1.fc40.noarch           7/7 
  Running scriptlet: python3-dnf-plugins-core-4.4.3-1.fc40.noarch           7/7 
  Verifying        : dbus-libs-1:1.14.10-1.fc40.x86_64                      1/7 
  Verifying        : python3-dateutil-1:2.8.2-10.fc39.noarch                2/7 
  Verifying        : python3-dbus-1.3.2-4.fc39.x86_64                       3/7 
  Verifying        : python3-distro-1.8.0-6.fc39.noarch                     4/7 
  Verifying        : python3-dnf-plugins-core-4.4.3-1.fc40.noarch           5/7 
  Verifying        : python3-six-1.16.0-12.fc39.noarch                      6/7 
  Verifying        : python3-systemd-235-5.fc39.x86_64                      7/7 

Installed:
  dbus-libs-1:1.14.10-1.fc40.x86_64                                             
  python3-dateutil-1:2.8.2-10.fc39.noarch                                       
  python3-dbus-1.3.2-4.fc39.x86_64                                              
  python3-distro-1.8.0-6.fc39.noarch                                            
  python3-dnf-plugins-core-4.4.3-1.fc40.noarch                                  
  python3-six-1.16.0-12.fc39.noarch                                             
  python3-systemd-235-5.fc39.x86_64                                             

Complete!
Finish(bootstrap): installing dnf tooling
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1697538015.619643/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf detected and used (direct choice)
Start: installing minimal buildroot with dnf
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository                                  63 kB/s | 1.5 kB     00:00    
Copr repository                                 1.7 MB/s |  71 kB     00:00    
fedora                                          175 kB/s |  24 kB     00:00    
Dependencies resolved.
================================================================================
 Package                       Arch   Version                      Repo    Size
================================================================================
Installing group/module packages:
 bash                          x86_64 5.2.15-5.fc39                fedora 1.8 M
 bzip2                         x86_64 1.0.8-16.fc39                fedora  52 k
 coreutils                     x86_64 9.4-1.fc40                   fedora 1.1 M
 cpio                          x86_64 2.14-4.fc39                  fedora 279 k
 diffutils                     x86_64 3.10-3.fc39                  fedora 398 k
 fedora-release-common         noarch 40-0.14                      fedora  19 k
 findutils                     x86_64 1:4.9.0-6.fc40               fedora 492 k
 gawk                          x86_64 5.2.2-2.fc39                 fedora 1.1 M
 glibc-minimal-langpack        x86_64 2.38.9000-12.fc40            fedora  76 k
 grep                          x86_64 3.11-5.fc40                  fedora 298 k
 gzip                          x86_64 1.12-6.fc39                  fedora 166 k
 info                          x86_64 7.0.3-3.fc39                 fedora 182 k
 patch                         x86_64 2.7.6-22.fc39                fedora 125 k
 redhat-rpm-config             noarch 269-1.fc40                   fedora  81 k
 rpm-build                     x86_64 4.19.0-1.fc40                fedora  79 k
 sed                           x86_64 4.8-14.fc39                  fedora 306 k
 shadow-utils                  x86_64 2:4.14.0-2.fc40              fedora 1.3 M
 tar                           x86_64 2:1.35-2.fc40                fedora 864 k
 unzip                         x86_64 6.0-62.fc39                  fedora 184 k
 util-linux                    x86_64 2.39.2-1.fc40                fedora 1.2 M
 which                         x86_64 2.21-40.fc39                 fedora  42 k
 xz                            x86_64 5.4.4-1.fc39                 fedora 556 k
Installing dependencies:
 alternatives                  x86_64 1.25-1.fc39                  fedora  39 k
 ansible-srpm-macros           noarch 1-11.fc39                    fedora  21 k
 audit-libs                    x86_64 3.1.2-4.fc40                 fedora 117 k
 authselect                    x86_64 1.4.3-1.fc40                 fedora 149 k
 authselect-libs               x86_64 1.4.3-1.fc40                 fedora 249 k
 basesystem                    noarch 11-18.fc39                   fedora 7.2 k
 binutils                      x86_64 2.41-7.fc40                  fedora 6.3 M
 binutils-gold                 x86_64 2.41-7.fc40                  fedora 796 k
 bzip2-libs                    x86_64 1.0.8-16.fc39                fedora  41 k
 ca-certificates               noarch 2023.2.62_v7.0.401-4.fc40    fedora 863 k
 coreutils-common              x86_64 9.4-1.fc40                   fedora 2.1 M
 cracklib                      x86_64 2.9.11-2.fc39                fedora  94 k
 crypto-policies               noarch 20230920-1.git570ea89.fc40   fedora  99 k
 curl                          x86_64 8.4.0-1.fc40                 fedora 362 k
 cyrus-sasl-lib                x86_64 2.1.28-11.fc39               fedora 793 k
 debugedit                     x86_64 5.0-10.fc39                  fedora  77 k
 dwz                           x86_64 0.15-3.fc39                  fedora 134 k
 ed                            x86_64 1.19-4.fc39                  fedora  79 k
 efi-srpm-macros               noarch 5-9.fc39                     fedora  22 k
 elfutils                      x86_64 0.189-6.fc40                 fedora 535 k
 elfutils-debuginfod-client    x86_64 0.189-6.fc40                 fedora  38 k
 elfutils-default-yama-scope   noarch 0.189-6.fc40                 fedora  13 k
 elfutils-libelf               x86_64 0.189-6.fc40                 fedora 195 k
 elfutils-libs                 x86_64 0.189-6.fc40                 fedora 258 k
 fedora-gpg-keys               noarch 40-0.2                       fedora 130 k
 fedora-release                noarch 40-0.14                      fedora 8.8 k
 fedora-release-identity-basic noarch 40-0.14                      fedora 9.6 k
 fedora-repos                  noarch 40-0.2                       fedora 9.3 k
 fedora-repos-rawhide          noarch 40-0.2                       fedora 8.9 k
 file                          x86_64 5.45-1.fc40                  fedora  49 k
 file-libs                     x86_64 5.45-1.fc40                  fedora 763 k
 filesystem                    x86_64 3.18-6.fc39                  fedora 1.1 M
 fonts-srpm-macros             noarch 1:2.0.5-12.fc39              fedora  26 k
 forge-srpm-macros             noarch 0.1.0-1.fc40                 fedora  18 k
 fpc-srpm-macros               noarch 1.3-8.fc39                   fedora 7.4 k
 gdb-minimal                   x86_64 13.2-11.fc40                 fedora 4.2 M
 gdbm-libs                     x86_64 1:1.23-4.fc39                fedora  56 k
 ghc-srpm-macros               noarch 1.6.1-3.fc40                 fedora 8.1 k
 glibc                         x86_64 2.38.9000-12.fc40            fedora 2.2 M
 glibc-common                  x86_64 2.38.9000-12.fc40            fedora 358 k
 glibc-gconv-extra             x86_64 2.38.9000-12.fc40            fedora 1.6 M
 gmp                           x86_64 1:6.2.1-5.fc39               fedora 313 k
 gnat-srpm-macros              noarch 6-3.fc39                     fedora 8.8 k
 go-srpm-macros                noarch 3.2.0-7.fc40                 fedora  27 k
 jansson                       x86_64 2.13.1-7.fc39                fedora  44 k
 kernel-srpm-macros            noarch 1.0-20.fc39                  fedora  10 k
 keyutils-libs                 x86_64 1.6.1-7.fc39                 fedora  31 k
 krb5-libs                     x86_64 1.21.2-1.fc40                fedora 765 k
 libacl                        x86_64 2.3.1-10.fc40                fedora  23 k
 libarchive                    x86_64 3.7.2-1.fc40                 fedora 408 k
 libattr                       x86_64 2.5.1-9.fc40                 fedora  18 k
 libblkid                      x86_64 2.39.2-1.fc40                fedora 116 k
 libbrotli                     x86_64 1.1.0-1.fc40                 fedora 336 k
 libcap                        x86_64 2.48-7.fc39                  fedora  68 k
 libcap-ng                     x86_64 0.8.3-8.fc40                 fedora  32 k
 libcom_err                    x86_64 1.47.0-2.fc39                fedora  26 k
 libcurl                       x86_64 8.4.0-1.fc40                 fedora 343 k
 libdb                         x86_64 5.3.28-58.fc40               fedora 759 k
 libeconf                      x86_64 0.5.2-1.fc40                 fedora  30 k
 libevent                      x86_64 2.1.12-9.fc39                fedora 258 k
 libfdisk                      x86_64 2.39.2-1.fc40                fedora 162 k
 libffi                        x86_64 3.4.4-4.fc39                 fedora  40 k
 libgcc                        x86_64 13.2.1-4.fc40                fedora 111 k
 libgomp                       x86_64 13.2.1-4.fc40                fedora 320 k
 libidn2                       x86_64 2.3.4-3.fc39                 fedora 117 k
 libmount                      x86_64 2.39.2-1.fc40                fedora 154 k
 libnghttp2                    x86_64 1.57.0-2.fc40                fedora  76 k
 libnsl2                       x86_64 2.0.0-6.fc39                 fedora  30 k
 libpkgconf                    x86_64 1.9.5-2.fc39                 fedora  38 k
 libpsl                        x86_64 0.21.2-4.fc39                fedora  63 k
 libpwquality                  x86_64 1.4.5-6.fc39                 fedora 120 k
 libselinux                    x86_64 3.5-5.fc39                   fedora  87 k
 libsemanage                   x86_64 3.5-4.fc39                   fedora 120 k
 libsepol                      x86_64 3.5-2.fc39                   fedora 324 k
 libsigsegv                    x86_64 2.14-5.fc39                  fedora  27 k
 libsmartcols                  x86_64 2.39.2-1.fc40                fedora  67 k
 libssh                        x86_64 0.10.5-2.fc39                fedora 211 k
 libssh-config                 noarch 0.10.5-2.fc39                fedora 9.2 k
 libstdc++                     x86_64 13.2.1-4.fc40                fedora 862 k
 libtasn1                      x86_64 4.19.0-3.fc39                fedora  74 k
 libtirpc                      x86_64 1.3.4-0.fc40                 fedora  94 k
 libunistring                  x86_64 1.1-5.fc40                   fedora 543 k
 libutempter                   x86_64 1.2.1-10.fc39                fedora  26 k
 libuuid                       x86_64 2.39.2-1.fc40                fedora  28 k
 libverto                      x86_64 0.3.2-6.fc39                 fedora  20 k
 libxcrypt                     x86_64 4.4.36-2.fc39                fedora 119 k
 libxml2                       x86_64 2.11.5-1.fc40                fedora 698 k
 libzstd                       x86_64 1.5.5-4.fc39                 fedora 309 k
 lua-libs                      x86_64 5.4.6-3.fc39                 fedora 133 k
 lua-srpm-macros               noarch 1-9.fc39                     fedora 8.6 k
 lz4-libs                      x86_64 1.9.4-4.fc39                 fedora  67 k
 mpfr                          x86_64 4.2.1-1.fc40                 fedora 343 k
 ncurses-base                  noarch 6.4-8.20231001.fc40          fedora  88 k
 ncurses-libs                  x86_64 6.4-8.20231001.fc40          fedora 338 k
 ocaml-srpm-macros             noarch 9-1.fc40                     fedora 9.0 k
 openblas-srpm-macros          noarch 2-14.fc39                    fedora 7.5 k
 openldap                      x86_64 2.6.6-1.fc39                 fedora 255 k
 openssl-libs                  x86_64 1:3.1.1-4.fc40               fedora 2.2 M
 p11-kit                       x86_64 0.25.0-2.fc39                fedora 486 k
 p11-kit-trust                 x86_64 0.25.0-2.fc39                fedora 142 k
 package-notes-srpm-macros     noarch 0.5-9.fc39                   fedora  11 k
 pam                           x86_64 1.5.3-2.fc39                 fedora 548 k
 pam-libs                      x86_64 1.5.3-2.fc39                 fedora  58 k
 pcre2                         x86_64 10.42-1.fc39.2               fedora 233 k
 pcre2-syntax                  noarch 10.42-1.fc39.2               fedora 143 k
 perl-srpm-macros              noarch 1-51.fc39                    fedora 8.0 k
 pkgconf                       x86_64 1.9.5-2.fc39                 fedora  42 k
 pkgconf-m4                    noarch 1.9.5-2.fc39                 fedora  14 k
 pkgconf-pkg-config            x86_64 1.9.5-2.fc39                 fedora 9.6 k
 popt                          x86_64 1.19-3.fc39                  fedora  66 k
 publicsuffix-list-dafsa       noarch 20230812-1.fc40              fedora  57 k
 pyproject-srpm-macros         noarch 1.10.0-1.fc40                fedora  14 k
 python-srpm-macros            noarch 3.12-4.fc40                  fedora  25 k
 qt5-srpm-macros               noarch 5.15.11-1.fc40               fedora 8.3 k
 qt6-srpm-macros               noarch 6.5.3-1.fc40                 fedora 8.6 k
 readline                      x86_64 8.2-4.fc39                   fedora 213 k
 rpm                           x86_64 4.19.0-1.fc40                fedora 538 k
 rpm-build-libs                x86_64 4.19.0-1.fc40                fedora  96 k
 rpm-libs                      x86_64 4.19.0-1.fc40                fedora 312 k
 rpm-sequoia                   x86_64 1.5.0-1.fc40                 fedora 883 k
 rust-srpm-macros              noarch 25.2-2.fc40                  fedora  13 k
 setup                         noarch 2.14.4-1.fc39                fedora 154 k
 sqlite-libs                   x86_64 3.43.1-1.fc40                fedora 688 k
 systemd-libs                  x86_64 254.5-2.fc40                 fedora 688 k
 util-linux-core               x86_64 2.39.2-1.fc40                fedora 493 k
 xxhash-libs                   x86_64 0.8.2-1.fc39                 fedora  37 k
 xz-libs                       x86_64 5.4.4-1.fc39                 fedora 108 k
 zip                           x86_64 3.0-39.fc40                  fedora 266 k
 zlib                          x86_64 1.2.13-4.fc39                fedora  94 k
 zstd                          x86_64 1.5.5-4.fc39                 fedora 482 k
Installing Groups:
 Buildsystem building group                                                    

Transaction Summary
================================================================================
Install  152 Packages

Total size: 53 M
Installed size: 181 M
Downloading Packages:
[SKIPPED] alternatives-1.25-1.fc39.x86_64.rpm: Already downloaded              
[SKIPPED] ansible-srpm-macros-1-11.fc39.noarch.rpm: Already downloaded         
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fedora                                          1.6 MB/s | 1.6 kB     00:00    
Importing GPG key 0xA15B79CC:
 Userid     : "Fedora (40) <fedora-40-primary@fedoraproject.org>"
 Fingerprint: 115D F9AE F857 853E E844 5D0A 0727 707E A15B 79CC
 From       : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary
Key imported successfully
fedora                                          1.6 MB/s | 1.6 kB     00:00    
GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary (0xA15B79CC) is already installed
fedora                                          1.6 MB/s | 1.6 kB     00:00    
Importing GPG key 0x18B8E74C:
 Userid     : "Fedora (39) <fedora-39-primary@fedoraproject.org>"
 Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C
 From       : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary
Key imported successfully
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
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warning: /etc/hosts created as /etc/hosts.rpmnew

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  Installing       : cyrus-sasl-lib-2.1.28-11.fc39.x86_64                85/152 
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  Installing       : shadow-utils-2:4.14.0-2.fc40.x86_64                 90/152 
  Running scriptlet: libutempter-1.2.1-10.fc39.x86_64                    91/152 
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  Installing       : libffi-3.4.4-4.fc39.x86_64                          92/152 
  Installing       : p11-kit-0.25.0-2.fc39.x86_64                        93/152 
  Installing       : libgomp-13.2.1-4.fc40.x86_64                        94/152 
  Installing       : libnghttp2-1.57.0-2.fc40.x86_64                     95/152 
  Installing       : libpkgconf-1.9.5-2.fc39.x86_64                      96/152 
  Installing       : pkgconf-1.9.5-2.fc39.x86_64                         97/152 
  Installing       : pkgconf-pkg-config-1.9.5-2.fc39.x86_64              98/152 
  Installing       : libsigsegv-2.14-5.fc39.x86_64                       99/152 
  Installing       : gawk-5.2.2-2.fc39.x86_64                           100/152 
  Installing       : libtasn1-4.19.0-3.fc39.x86_64                      101/152 
  Installing       : p11-kit-trust-0.25.0-2.fc39.x86_64                 102/152 
  Running scriptlet: p11-kit-trust-0.25.0-2.fc39.x86_64                 102/152 
  Installing       : libverto-0.3.2-6.fc39.x86_64                       103/152 
  Installing       : xxhash-libs-0.8.2-1.fc39.x86_64                    104/152 
  Installing       : libssh-config-0.10.5-2.fc39.noarch                 105/152 
  Installing       : kernel-srpm-macros-1.0-20.fc39.noarch              106/152 
  Installing       : gnat-srpm-macros-6-3.fc39.noarch                   107/152 
  Installing       : ghc-srpm-macros-1.6.1-3.fc40.noarch                108/152 
  Installing       : fpc-srpm-macros-1.3-8.fc39.noarch                  109/152 
  Installing       : coreutils-common-9.4-1.fc40.x86_64                 110/152 
  Installing       : openssl-libs-1:3.1.1-4.fc40.x86_64                 111/152 
  Installing       : coreutils-9.4-1.fc40.x86_64                        112/152 
  Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch   113/152 
  Installing       : ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch   113/152 
  Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch   113/152 
  Installing       : krb5-libs-1.21.2-1.fc40.x86_64                     114/152 
  Installing       : libtirpc-1.3.4-0.fc40.x86_64                       115/152 
  Running scriptlet: authselect-libs-1.4.3-1.fc40.x86_64                116/152 
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  Installing       : gzip-1.12-6.fc39.x86_64                            117/152 
  Installing       : cracklib-2.9.11-2.fc39.x86_64                      118/152 
  Installing       : libpwquality-1.4.5-6.fc39.x86_64                   119/152 
  Installing       : authselect-1.4.3-1.fc40.x86_64                     120/152 
  Installing       : libnsl2-2.0.0-6.fc39.x86_64                        121/152 
  Installing       : pam-1.5.3-2.fc39.x86_64                            122/152 
  Installing       : libssh-0.10.5-2.fc39.x86_64                        123/152 
  Installing       : libarchive-3.7.2-1.fc40.x86_64                     124/152 
  Installing       : libevent-2.1.12-9.fc39.x86_64                      125/152 
  Installing       : openldap-2.6.6-1.fc39.x86_64                       126/152 
  Installing       : libcurl-8.4.0-1.fc40.x86_64                        127/152 
  Installing       : elfutils-libs-0.189-6.fc40.x86_64                  128/152 
  Installing       : elfutils-debuginfod-client-0.189-6.fc40.x86_64     129/152 
  Installing       : binutils-gold-2.41-7.fc40.x86_64                   130/152 
  Running scriptlet: binutils-gold-2.41-7.fc40.x86_64                   130/152 
  Installing       : binutils-2.41-7.fc40.x86_64                        131/152 
  Running scriptlet: binutils-2.41-7.fc40.x86_64                        131/152 
  Installing       : elfutils-0.189-6.fc40.x86_64                       132/152 
  Installing       : gdb-minimal-13.2-11.fc40.x86_64                    133/152 
  Installing       : debugedit-5.0-10.fc39.x86_64                       134/152 
  Installing       : curl-8.4.0-1.fc40.x86_64                           135/152 
  Installing       : rpm-sequoia-1.5.0-1.fc40.x86_64                    136/152 
  Installing       : rpm-libs-4.19.0-1.fc40.x86_64                      137/152 
  Running scriptlet: rpm-4.19.0-1.fc40.x86_64                           138/152 
  Installing       : rpm-4.19.0-1.fc40.x86_64                           138/152 
  Installing       : efi-srpm-macros-5-9.fc39.noarch                    139/152 
  Installing       : lua-srpm-macros-1-9.fc39.noarch                    140/152 
  Installing       : rpm-build-libs-4.19.0-1.fc40.x86_64                141/152 
  Installing       : ansible-srpm-macros-1-11.fc39.noarch               142/152 
  Installing       : fonts-srpm-macros-1:2.0.5-12.fc39.noarch           143/152 
  Installing       : forge-srpm-macros-0.1.0-1.fc40.noarch              144/152 
  Installing       : go-srpm-macros-3.2.0-7.fc40.noarch                 145/152 
  Installing       : python-srpm-macros-3.12-4.fc40.noarch              146/152 
  Installing       : redhat-rpm-config-269-1.fc40.noarch                147/152 
  Installing       : rpm-build-4.19.0-1.fc40.x86_64                     148/152 
  Installing       : pyproject-srpm-macros-1.10.0-1.fc40.noarch         149/152 
  Installing       : util-linux-2.39.2-1.fc40.x86_64                    150/152 
  Installing       : which-2.21-40.fc39.x86_64                          151/152 
  Installing       : info-7.0.3-3.fc39.x86_64                           152/152 
  Running scriptlet: filesystem-3.18-6.fc39.x86_64                      152/152 
  Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch   152/152 
  Running scriptlet: authselect-libs-1.4.3-1.fc40.x86_64                152/152 
  Running scriptlet: rpm-4.19.0-1.fc40.x86_64                           152/152 
  Running scriptlet: info-7.0.3-3.fc39.x86_64                           152/152 
  Verifying        : alternatives-1.25-1.fc39.x86_64                      1/152 
  Verifying        : ansible-srpm-macros-1-11.fc39.noarch                 2/152 
  Verifying        : audit-libs-3.1.2-4.fc40.x86_64                       3/152 
  Verifying        : authselect-1.4.3-1.fc40.x86_64                       4/152 
  Verifying        : authselect-libs-1.4.3-1.fc40.x86_64                  5/152 
  Verifying        : basesystem-11-18.fc39.noarch                         6/152 
  Verifying        : bash-5.2.15-5.fc39.x86_64                            7/152 
  Verifying        : binutils-2.41-7.fc40.x86_64                          8/152 
  Verifying        : binutils-gold-2.41-7.fc40.x86_64                     9/152 
  Verifying        : bzip2-1.0.8-16.fc39.x86_64                          10/152 
  Verifying        : bzip2-libs-1.0.8-16.fc39.x86_64                     11/152 
  Verifying        : ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch    12/152 
  Verifying        : coreutils-9.4-1.fc40.x86_64                         13/152 
  Verifying        : coreutils-common-9.4-1.fc40.x86_64                  14/152 
  Verifying        : cpio-2.14-4.fc39.x86_64                             15/152 
  Verifying        : cracklib-2.9.11-2.fc39.x86_64                       16/152 
  Verifying        : crypto-policies-20230920-1.git570ea89.fc40.noarc    17/152 
  Verifying        : curl-8.4.0-1.fc40.x86_64                            18/152 
  Verifying        : cyrus-sasl-lib-2.1.28-11.fc39.x86_64                19/152 
  Verifying        : debugedit-5.0-10.fc39.x86_64                        20/152 
  Verifying        : diffutils-3.10-3.fc39.x86_64                        21/152 
  Verifying        : dwz-0.15-3.fc39.x86_64                              22/152 
  Verifying        : ed-1.19-4.fc39.x86_64                               23/152 
  Verifying        : efi-srpm-macros-5-9.fc39.noarch                     24/152 
  Verifying        : elfutils-0.189-6.fc40.x86_64                        25/152 
  Verifying        : elfutils-debuginfod-client-0.189-6.fc40.x86_64      26/152 
  Verifying        : elfutils-default-yama-scope-0.189-6.fc40.noarch     27/152 
  Verifying        : elfutils-libelf-0.189-6.fc40.x86_64                 28/152 
  Verifying        : elfutils-libs-0.189-6.fc40.x86_64                   29/152 
  Verifying        : fedora-gpg-keys-40-0.2.noarch                       30/152 
  Verifying        : fedora-release-40-0.14.noarch                       31/152 
  Verifying        : fedora-release-common-40-0.14.noarch                32/152 
  Verifying        : fedora-release-identity-basic-40-0.14.noarch        33/152 
  Verifying        : fedora-repos-40-0.2.noarch                          34/152 
  Verifying        : fedora-repos-rawhide-40-0.2.noarch                  35/152 
  Verifying        : file-5.45-1.fc40.x86_64                             36/152 
  Verifying        : file-libs-5.45-1.fc40.x86_64                        37/152 
  Verifying        : filesystem-3.18-6.fc39.x86_64                       38/152 
  Verifying        : findutils-1:4.9.0-6.fc40.x86_64                     39/152 
  Verifying        : fonts-srpm-macros-1:2.0.5-12.fc39.noarch            40/152 
  Verifying        : forge-srpm-macros-0.1.0-1.fc40.noarch               41/152 
  Verifying        : fpc-srpm-macros-1.3-8.fc39.noarch                   42/152 
  Verifying        : gawk-5.2.2-2.fc39.x86_64                            43/152 
  Verifying        : gdb-minimal-13.2-11.fc40.x86_64                     44/152 
  Verifying        : gdbm-libs-1:1.23-4.fc39.x86_64                      45/152 
  Verifying        : ghc-srpm-macros-1.6.1-3.fc40.noarch                 46/152 
  Verifying        : glibc-2.38.9000-12.fc40.x86_64                      47/152 
  Verifying        : glibc-common-2.38.9000-12.fc40.x86_64               48/152 
  Verifying        : glibc-gconv-extra-2.38.9000-12.fc40.x86_64          49/152 
  Verifying        : glibc-minimal-langpack-2.38.9000-12.fc40.x86_64     50/152 
  Verifying        : gmp-1:6.2.1-5.fc39.x86_64                           51/152 
  Verifying        : gnat-srpm-macros-6-3.fc39.noarch                    52/152 
  Verifying        : go-srpm-macros-3.2.0-7.fc40.noarch                  53/152 
  Verifying        : grep-3.11-5.fc40.x86_64                             54/152 
  Verifying        : gzip-1.12-6.fc39.x86_64                             55/152 
  Verifying        : info-7.0.3-3.fc39.x86_64                            56/152 
  Verifying        : jansson-2.13.1-7.fc39.x86_64                        57/152 
  Verifying        : kernel-srpm-macros-1.0-20.fc39.noarch               58/152 
  Verifying        : keyutils-libs-1.6.1-7.fc39.x86_64                   59/152 
  Verifying        : krb5-libs-1.21.2-1.fc40.x86_64                      60/152 
  Verifying        : libacl-2.3.1-10.fc40.x86_64                         61/152 
  Verifying        : libarchive-3.7.2-1.fc40.x86_64                      62/152 
  Verifying        : libattr-2.5.1-9.fc40.x86_64                         63/152 
  Verifying        : libblkid-2.39.2-1.fc40.x86_64                       64/152 
  Verifying        : libbrotli-1.1.0-1.fc40.x86_64                       65/152 
  Verifying        : libcap-2.48-7.fc39.x86_64                           66/152 
  Verifying        : libcap-ng-0.8.3-8.fc40.x86_64                       67/152 
  Verifying        : libcom_err-1.47.0-2.fc39.x86_64                     68/152 
  Verifying        : libcurl-8.4.0-1.fc40.x86_64                         69/152 
  Verifying        : libdb-5.3.28-58.fc40.x86_64                         70/152 
  Verifying        : libeconf-0.5.2-1.fc40.x86_64                        71/152 
  Verifying        : libevent-2.1.12-9.fc39.x86_64                       72/152 
  Verifying        : libfdisk-2.39.2-1.fc40.x86_64                       73/152 
  Verifying        : libffi-3.4.4-4.fc39.x86_64                          74/152 
  Verifying        : libgcc-13.2.1-4.fc40.x86_64                         75/152 
  Verifying        : libgomp-13.2.1-4.fc40.x86_64                        76/152 
  Verifying        : libidn2-2.3.4-3.fc39.x86_64                         77/152 
  Verifying        : libmount-2.39.2-1.fc40.x86_64                       78/152 
  Verifying        : libnghttp2-1.57.0-2.fc40.x86_64                     79/152 
  Verifying        : libnsl2-2.0.0-6.fc39.x86_64                         80/152 
  Verifying        : libpkgconf-1.9.5-2.fc39.x86_64                      81/152 
  Verifying        : libpsl-0.21.2-4.fc39.x86_64                         82/152 
  Verifying        : libpwquality-1.4.5-6.fc39.x86_64                    83/152 
  Verifying        : libselinux-3.5-5.fc39.x86_64                        84/152 
  Verifying        : libsemanage-3.5-4.fc39.x86_64                       85/152 
  Verifying        : libsepol-3.5-2.fc39.x86_64                          86/152 
  Verifying        : libsigsegv-2.14-5.fc39.x86_64                       87/152 
  Verifying        : libsmartcols-2.39.2-1.fc40.x86_64                   88/152 
  Verifying        : libssh-0.10.5-2.fc39.x86_64                         89/152 
  Verifying        : libssh-config-0.10.5-2.fc39.noarch                  90/152 
  Verifying        : libstdc++-13.2.1-4.fc40.x86_64                      91/152 
  Verifying        : libtasn1-4.19.0-3.fc39.x86_64                       92/152 
  Verifying        : libtirpc-1.3.4-0.fc40.x86_64                        93/152 
  Verifying        : libunistring-1.1-5.fc40.x86_64                      94/152 
  Verifying        : libutempter-1.2.1-10.fc39.x86_64                    95/152 
  Verifying        : libuuid-2.39.2-1.fc40.x86_64                        96/152 
  Verifying        : libverto-0.3.2-6.fc39.x86_64                        97/152 
  Verifying        : libxcrypt-4.4.36-2.fc39.x86_64                      98/152 
  Verifying        : libxml2-2.11.5-1.fc40.x86_64                        99/152 
  Verifying        : libzstd-1.5.5-4.fc39.x86_64                        100/152 
  Verifying        : lua-libs-5.4.6-3.fc39.x86_64                       101/152 
  Verifying        : lua-srpm-macros-1-9.fc39.noarch                    102/152 
  Verifying        : lz4-libs-1.9.4-4.fc39.x86_64                       103/152 
  Verifying        : mpfr-4.2.1-1.fc40.x86_64                           104/152 
  Verifying        : ncurses-base-6.4-8.20231001.fc40.noarch            105/152 
  Verifying        : ncurses-libs-6.4-8.20231001.fc40.x86_64            106/152 
  Verifying        : ocaml-srpm-macros-9-1.fc40.noarch                  107/152 
  Verifying        : openblas-srpm-macros-2-14.fc39.noarch              108/152 
  Verifying        : openldap-2.6.6-1.fc39.x86_64                       109/152 
  Verifying        : openssl-libs-1:3.1.1-4.fc40.x86_64                 110/152 
  Verifying        : p11-kit-0.25.0-2.fc39.x86_64                       111/152 
  Verifying        : p11-kit-trust-0.25.0-2.fc39.x86_64                 112/152 
  Verifying        : package-notes-srpm-macros-0.5-9.fc39.noarch        113/152 
  Verifying        : pam-1.5.3-2.fc39.x86_64                            114/152 
  Verifying        : pam-libs-1.5.3-2.fc39.x86_64                       115/152 
  Verifying        : patch-2.7.6-22.fc39.x86_64                         116/152 
  Verifying        : pcre2-10.42-1.fc39.2.x86_64                        117/152 
  Verifying        : pcre2-syntax-10.42-1.fc39.2.noarch                 118/152 
  Verifying        : perl-srpm-macros-1-51.fc39.noarch                  119/152 
  Verifying        : pkgconf-1.9.5-2.fc39.x86_64                        120/152 
  Verifying        : pkgconf-m4-1.9.5-2.fc39.noarch                     121/152 
  Verifying        : pkgconf-pkg-config-1.9.5-2.fc39.x86_64             122/152 
  Verifying        : popt-1.19-3.fc39.x86_64                            123/152 
  Verifying        : publicsuffix-list-dafsa-20230812-1.fc40.noarch     124/152 
  Verifying        : pyproject-srpm-macros-1.10.0-1.fc40.noarch         125/152 
  Verifying        : python-srpm-macros-3.12-4.fc40.noarch              126/152 
  Verifying        : qt5-srpm-macros-5.15.11-1.fc40.noarch              127/152 
  Verifying        : qt6-srpm-macros-6.5.3-1.fc40.noarch                128/152 
  Verifying        : readline-8.2-4.fc39.x86_64                         129/152 
  Verifying        : redhat-rpm-config-269-1.fc40.noarch                130/152 
  Verifying        : rpm-4.19.0-1.fc40.x86_64                           131/152 
  Verifying        : rpm-build-4.19.0-1.fc40.x86_64                     132/152 
  Verifying        : rpm-build-libs-4.19.0-1.fc40.x86_64                133/152 
  Verifying        : rpm-libs-4.19.0-1.fc40.x86_64                      134/152 
  Verifying        : rpm-sequoia-1.5.0-1.fc40.x86_64                    135/152 
  Verifying        : rust-srpm-macros-25.2-2.fc40.noarch                136/152 
  Verifying        : sed-4.8-14.fc39.x86_64                             137/152 
  Verifying        : setup-2.14.4-1.fc39.noarch                         138/152 
  Verifying        : shadow-utils-2:4.14.0-2.fc40.x86_64                139/152 
  Verifying        : sqlite-libs-3.43.1-1.fc40.x86_64                   140/152 
  Verifying        : systemd-libs-254.5-2.fc40.x86_64                   141/152 
  Verifying        : tar-2:1.35-2.fc40.x86_64                           142/152 
  Verifying        : unzip-6.0-62.fc39.x86_64                           143/152 
  Verifying        : util-linux-2.39.2-1.fc40.x86_64                    144/152 
  Verifying        : util-linux-core-2.39.2-1.fc40.x86_64               145/152 
  Verifying        : which-2.21-40.fc39.x86_64                          146/152 
  Verifying        : xxhash-libs-0.8.2-1.fc39.x86_64                    147/152 
  Verifying        : xz-5.4.4-1.fc39.x86_64                             148/152 
  Verifying        : xz-libs-5.4.4-1.fc39.x86_64                        149/152 
  Verifying        : zip-3.0-39.fc40.x86_64                             150/152 
  Verifying        : zlib-1.2.13-4.fc39.x86_64                          151/152 
  Verifying        : zstd-1.5.5-4.fc39.x86_64                           152/152 

Installed:
  alternatives-1.25-1.fc39.x86_64                                               
  ansible-srpm-macros-1-11.fc39.noarch                                          
  audit-libs-3.1.2-4.fc40.x86_64                                                
  authselect-1.4.3-1.fc40.x86_64                                                
  authselect-libs-1.4.3-1.fc40.x86_64                                           
  basesystem-11-18.fc39.noarch                                                  
  bash-5.2.15-5.fc39.x86_64                                                     
  binutils-2.41-7.fc40.x86_64                                                   
  binutils-gold-2.41-7.fc40.x86_64                                              
  bzip2-1.0.8-16.fc39.x86_64                                                    
  bzip2-libs-1.0.8-16.fc39.x86_64                                               
  ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch                              
  coreutils-9.4-1.fc40.x86_64                                                   
  coreutils-common-9.4-1.fc40.x86_64                                            
  cpio-2.14-4.fc39.x86_64                                                       
  cracklib-2.9.11-2.fc39.x86_64                                                 
  crypto-policies-20230920-1.git570ea89.fc40.noarch                             
  curl-8.4.0-1.fc40.x86_64                                                      
  cyrus-sasl-lib-2.1.28-11.fc39.x86_64                                          
  debugedit-5.0-10.fc39.x86_64                                                  
  diffutils-3.10-3.fc39.x86_64                                                  
  dwz-0.15-3.fc39.x86_64                                                        
  ed-1.19-4.fc39.x86_64                                                         
  efi-srpm-macros-5-9.fc39.noarch                                               
  elfutils-0.189-6.fc40.x86_64                                                  
  elfutils-debuginfod-client-0.189-6.fc40.x86_64                                
  elfutils-default-yama-scope-0.189-6.fc40.noarch                               
  elfutils-libelf-0.189-6.fc40.x86_64                                           
  elfutils-libs-0.189-6.fc40.x86_64                                             
  fedora-gpg-keys-40-0.2.noarch                                                 
  fedora-release-40-0.14.noarch                                                 
  fedora-release-common-40-0.14.noarch                                          
  fedora-release-identity-basic-40-0.14.noarch                                  
  fedora-repos-40-0.2.noarch                                                    
  fedora-repos-rawhide-40-0.2.noarch                                            
  file-5.45-1.fc40.x86_64                                                       
  file-libs-5.45-1.fc40.x86_64                                                  
  filesystem-3.18-6.fc39.x86_64                                                 
  findutils-1:4.9.0-6.fc40.x86_64                                               
  fonts-srpm-macros-1:2.0.5-12.fc39.noarch                                      
  forge-srpm-macros-0.1.0-1.fc40.noarch                                         
  fpc-srpm-macros-1.3-8.fc39.noarch                                             
  gawk-5.2.2-2.fc39.x86_64                                                      
  gdb-minimal-13.2-11.fc40.x86_64                                               
  gdbm-libs-1:1.23-4.fc39.x86_64                                                
  ghc-srpm-macros-1.6.1-3.fc40.noarch                                           
  glibc-2.38.9000-12.fc40.x86_64                                                
  glibc-common-2.38.9000-12.fc40.x86_64                                         
  glibc-gconv-extra-2.38.9000-12.fc40.x86_64                                    
  glibc-minimal-langpack-2.38.9000-12.fc40.x86_64                               
  gmp-1:6.2.1-5.fc39.x86_64                                                     
  gnat-srpm-macros-6-3.fc39.noarch                                              
  go-srpm-macros-3.2.0-7.fc40.noarch                                            
  grep-3.11-5.fc40.x86_64                                                       
  gzip-1.12-6.fc39.x86_64                                                       
  info-7.0.3-3.fc39.x86_64                                                      
  jansson-2.13.1-7.fc39.x86_64                                                  
  kernel-srpm-macros-1.0-20.fc39.noarch                                         
  keyutils-libs-1.6.1-7.fc39.x86_64                                             
  krb5-libs-1.21.2-1.fc40.x86_64                                                
  libacl-2.3.1-10.fc40.x86_64                                                   
  libarchive-3.7.2-1.fc40.x86_64                                                
  libattr-2.5.1-9.fc40.x86_64                                                   
  libblkid-2.39.2-1.fc40.x86_64                                                 
  libbrotli-1.1.0-1.fc40.x86_64                                                 
  libcap-2.48-7.fc39.x86_64                                                     
  libcap-ng-0.8.3-8.fc40.x86_64                                                 
  libcom_err-1.47.0-2.fc39.x86_64                                               
  libcurl-8.4.0-1.fc40.x86_64                                                   
  libdb-5.3.28-58.fc40.x86_64                                                   
  libeconf-0.5.2-1.fc40.x86_64                                                  
  libevent-2.1.12-9.fc39.x86_64                                                 
  libfdisk-2.39.2-1.fc40.x86_64                                                 
  libffi-3.4.4-4.fc39.x86_64                                                    
  libgcc-13.2.1-4.fc40.x86_64                                                   
  libgomp-13.2.1-4.fc40.x86_64                                                  
  libidn2-2.3.4-3.fc39.x86_64                                                   
  libmount-2.39.2-1.fc40.x86_64                                                 
  libnghttp2-1.57.0-2.fc40.x86_64                                               
  libnsl2-2.0.0-6.fc39.x86_64                                                   
  libpkgconf-1.9.5-2.fc39.x86_64                                                
  libpsl-0.21.2-4.fc39.x86_64                                                   
  libpwquality-1.4.5-6.fc39.x86_64                                              
  libselinux-3.5-5.fc39.x86_64                                                  
  libsemanage-3.5-4.fc39.x86_64                                                 
  libsepol-3.5-2.fc39.x86_64                                                    
  libsigsegv-2.14-5.fc39.x86_64                                                 
  libsmartcols-2.39.2-1.fc40.x86_64                                             
  libssh-0.10.5-2.fc39.x86_64                                                   
  libssh-config-0.10.5-2.fc39.noarch                                            
  libstdc++-13.2.1-4.fc40.x86_64                                                
  libtasn1-4.19.0-3.fc39.x86_64                                                 
  libtirpc-1.3.4-0.fc40.x86_64                                                  
  libunistring-1.1-5.fc40.x86_64                                                
  libutempter-1.2.1-10.fc39.x86_64                                              
  libuuid-2.39.2-1.fc40.x86_64                                                  
  libverto-0.3.2-6.fc39.x86_64                                                  
  libxcrypt-4.4.36-2.fc39.x86_64                                                
  libxml2-2.11.5-1.fc40.x86_64                                                  
  libzstd-1.5.5-4.fc39.x86_64                                                   
  lua-libs-5.4.6-3.fc39.x86_64                                                  
  lua-srpm-macros-1-9.fc39.noarch                                               
  lz4-libs-1.9.4-4.fc39.x86_64                                                  
  mpfr-4.2.1-1.fc40.x86_64                                                      
  ncurses-base-6.4-8.20231001.fc40.noarch                                       
  ncurses-libs-6.4-8.20231001.fc40.x86_64                                       
  ocaml-srpm-macros-9-1.fc40.noarch                                             
  openblas-srpm-macros-2-14.fc39.noarch                                         
  openldap-2.6.6-1.fc39.x86_64                                                  
  openssl-libs-1:3.1.1-4.fc40.x86_64                                            
  p11-kit-0.25.0-2.fc39.x86_64                                                  
  p11-kit-trust-0.25.0-2.fc39.x86_64                                            
  package-notes-srpm-macros-0.5-9.fc39.noarch                                   
  pam-1.5.3-2.fc39.x86_64                                                       
  pam-libs-1.5.3-2.fc39.x86_64                                                  
  patch-2.7.6-22.fc39.x86_64                                                    
  pcre2-10.42-1.fc39.2.x86_64                                                   
  pcre2-syntax-10.42-1.fc39.2.noarch                                            
  perl-srpm-macros-1-51.fc39.noarch                                             
  pkgconf-1.9.5-2.fc39.x86_64                                                   
  pkgconf-m4-1.9.5-2.fc39.noarch                                                
  pkgconf-pkg-config-1.9.5-2.fc39.x86_64                                        
  popt-1.19-3.fc39.x86_64                                                       
  publicsuffix-list-dafsa-20230812-1.fc40.noarch                                
  pyproject-srpm-macros-1.10.0-1.fc40.noarch                                    
  python-srpm-macros-3.12-4.fc40.noarch                                         
  qt5-srpm-macros-5.15.11-1.fc40.noarch                                         
  qt6-srpm-macros-6.5.3-1.fc40.noarch                                           
  readline-8.2-4.fc39.x86_64                                                    
  redhat-rpm-config-269-1.fc40.noarch                                           
  rpm-4.19.0-1.fc40.x86_64                                                      
  rpm-build-4.19.0-1.fc40.x86_64                                                
  rpm-build-libs-4.19.0-1.fc40.x86_64                                           
  rpm-libs-4.19.0-1.fc40.x86_64                                                 
  rpm-sequoia-1.5.0-1.fc40.x86_64                                               
  rust-srpm-macros-25.2-2.fc40.noarch                                           
  sed-4.8-14.fc39.x86_64                                                        
  setup-2.14.4-1.fc39.noarch                                                    
  shadow-utils-2:4.14.0-2.fc40.x86_64                                           
  sqlite-libs-3.43.1-1.fc40.x86_64                                              
  systemd-libs-254.5-2.fc40.x86_64                                              
  tar-2:1.35-2.fc40.x86_64                                                      
  unzip-6.0-62.fc39.x86_64                                                      
  util-linux-2.39.2-1.fc40.x86_64                                               
  util-linux-core-2.39.2-1.fc40.x86_64                                          
  which-2.21-40.fc39.x86_64                                                     
  xxhash-libs-0.8.2-1.fc39.x86_64                                               
  xz-5.4.4-1.fc39.x86_64                                                        
  xz-libs-5.4.4-1.fc39.x86_64                                                   
  zip-3.0-39.fc40.x86_64                                                        
  zlib-1.2.13-4.fc39.x86_64                                                     
  zstd-1.5.5-4.fc39.x86_64                                                      

Complete!
Finish: installing minimal buildroot with dnf
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: alternatives-1.25-1.fc39.x86_64
ansible-srpm-macros-1-11.fc39.noarch
audit-libs-3.1.2-4.fc40.x86_64
authselect-1.4.3-1.fc40.x86_64
authselect-libs-1.4.3-1.fc40.x86_64
basesystem-11-18.fc39.noarch
bash-5.2.15-5.fc39.x86_64
binutils-2.41-7.fc40.x86_64
binutils-gold-2.41-7.fc40.x86_64
bzip2-1.0.8-16.fc39.x86_64
bzip2-libs-1.0.8-16.fc39.x86_64
ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch
coreutils-9.4-1.fc40.x86_64
coreutils-common-9.4-1.fc40.x86_64
cpio-2.14-4.fc39.x86_64
cracklib-2.9.11-2.fc39.x86_64
crypto-policies-20230920-1.git570ea89.fc40.noarch
curl-8.4.0-1.fc40.x86_64
cyrus-sasl-lib-2.1.28-11.fc39.x86_64
debugedit-5.0-10.fc39.x86_64
diffutils-3.10-3.fc39.x86_64
dwz-0.15-3.fc39.x86_64
ed-1.19-4.fc39.x86_64
efi-srpm-macros-5-9.fc39.noarch
elfutils-0.189-6.fc40.x86_64
elfutils-debuginfod-client-0.189-6.fc40.x86_64
elfutils-default-yama-scope-0.189-6.fc40.noarch
elfutils-libelf-0.189-6.fc40.x86_64
elfutils-libs-0.189-6.fc40.x86_64
fedora-gpg-keys-40-0.2.noarch
fedora-release-40-0.14.noarch
fedora-release-common-40-0.14.noarch
fedora-release-identity-basic-40-0.14.noarch
fedora-repos-40-0.2.noarch
fedora-repos-rawhide-40-0.2.noarch
file-5.45-1.fc40.x86_64
file-libs-5.45-1.fc40.x86_64
filesystem-3.18-6.fc39.x86_64
findutils-4.9.0-6.fc40.x86_64
fonts-srpm-macros-2.0.5-12.fc39.noarch
forge-srpm-macros-0.1.0-1.fc40.noarch
fpc-srpm-macros-1.3-8.fc39.noarch
gawk-5.2.2-2.fc39.x86_64
gdb-minimal-13.2-11.fc40.x86_64
gdbm-libs-1.23-4.fc39.x86_64
ghc-srpm-macros-1.6.1-3.fc40.noarch
glibc-2.38.9000-12.fc40.x86_64
glibc-common-2.38.9000-12.fc40.x86_64
glibc-gconv-extra-2.38.9000-12.fc40.x86_64
glibc-minimal-langpack-2.38.9000-12.fc40.x86_64
gmp-6.2.1-5.fc39.x86_64
gnat-srpm-macros-6-3.fc39.noarch
go-srpm-macros-3.2.0-7.fc40.noarch
gpg-pubkey-18b8e74c-62f2920f
gpg-pubkey-a15b79cc-63d04c2c
grep-3.11-5.fc40.x86_64
gzip-1.12-6.fc39.x86_64
info-7.0.3-3.fc39.x86_64
jansson-2.13.1-7.fc39.x86_64
kernel-srpm-macros-1.0-20.fc39.noarch
keyutils-libs-1.6.1-7.fc39.x86_64
krb5-libs-1.21.2-1.fc40.x86_64
libacl-2.3.1-10.fc40.x86_64
libarchive-3.7.2-1.fc40.x86_64
libattr-2.5.1-9.fc40.x86_64
libblkid-2.39.2-1.fc40.x86_64
libbrotli-1.1.0-1.fc40.x86_64
libcap-2.48-7.fc39.x86_64
libcap-ng-0.8.3-8.fc40.x86_64
libcom_err-1.47.0-2.fc39.x86_64
libcurl-8.4.0-1.fc40.x86_64
libdb-5.3.28-58.fc40.x86_64
libeconf-0.5.2-1.fc40.x86_64
libevent-2.1.12-9.fc39.x86_64
libfdisk-2.39.2-1.fc40.x86_64
libffi-3.4.4-4.fc39.x86_64
libgcc-13.2.1-4.fc40.x86_64
libgomp-13.2.1-4.fc40.x86_64
libidn2-2.3.4-3.fc39.x86_64
libmount-2.39.2-1.fc40.x86_64
libnghttp2-1.57.0-2.fc40.x86_64
libnsl2-2.0.0-6.fc39.x86_64
libpkgconf-1.9.5-2.fc39.x86_64
libpsl-0.21.2-4.fc39.x86_64
libpwquality-1.4.5-6.fc39.x86_64
libselinux-3.5-5.fc39.x86_64
libsemanage-3.5-4.fc39.x86_64
libsepol-3.5-2.fc39.x86_64
libsigsegv-2.14-5.fc39.x86_64
libsmartcols-2.39.2-1.fc40.x86_64
libssh-0.10.5-2.fc39.x86_64
libssh-config-0.10.5-2.fc39.noarch
libstdc++-13.2.1-4.fc40.x86_64
libtasn1-4.19.0-3.fc39.x86_64
libtirpc-1.3.4-0.fc40.x86_64
libunistring-1.1-5.fc40.x86_64
libutempter-1.2.1-10.fc39.x86_64
libuuid-2.39.2-1.fc40.x86_64
libverto-0.3.2-6.fc39.x86_64
libxcrypt-4.4.36-2.fc39.x86_64
libxml2-2.11.5-1.fc40.x86_64
libzstd-1.5.5-4.fc39.x86_64
lua-libs-5.4.6-3.fc39.x86_64
lua-srpm-macros-1-9.fc39.noarch
lz4-libs-1.9.4-4.fc39.x86_64
mpfr-4.2.1-1.fc40.x86_64
ncurses-base-6.4-8.20231001.fc40.noarch
ncurses-libs-6.4-8.20231001.fc40.x86_64
ocaml-srpm-macros-9-1.fc40.noarch
openblas-srpm-macros-2-14.fc39.noarch
openldap-2.6.6-1.fc39.x86_64
openssl-libs-3.1.1-4.fc40.x86_64
p11-kit-0.25.0-2.fc39.x86_64
p11-kit-trust-0.25.0-2.fc39.x86_64
package-notes-srpm-macros-0.5-9.fc39.noarch
pam-1.5.3-2.fc39.x86_64
pam-libs-1.5.3-2.fc39.x86_64
patch-2.7.6-22.fc39.x86_64
pcre2-10.42-1.fc39.2.x86_64
pcre2-syntax-10.42-1.fc39.2.noarch
perl-srpm-macros-1-51.fc39.noarch
pkgconf-1.9.5-2.fc39.x86_64
pkgconf-m4-1.9.5-2.fc39.noarch
pkgconf-pkg-config-1.9.5-2.fc39.x86_64
popt-1.19-3.fc39.x86_64
publicsuffix-list-dafsa-20230812-1.fc40.noarch
pyproject-srpm-macros-1.10.0-1.fc40.noarch
python-srpm-macros-3.12-4.fc40.noarch
qt5-srpm-macros-5.15.11-1.fc40.noarch
qt6-srpm-macros-6.5.3-1.fc40.noarch
readline-8.2-4.fc39.x86_64
redhat-rpm-config-269-1.fc40.noarch
rpm-4.19.0-1.fc40.x86_64
rpm-build-4.19.0-1.fc40.x86_64
rpm-build-libs-4.19.0-1.fc40.x86_64
rpm-libs-4.19.0-1.fc40.x86_64
rpm-sequoia-1.5.0-1.fc40.x86_64
rust-srpm-macros-25.2-2.fc40.noarch
sed-4.8-14.fc39.x86_64
setup-2.14.4-1.fc39.noarch
shadow-utils-4.14.0-2.fc40.x86_64
sqlite-libs-3.43.1-1.fc40.x86_64
systemd-libs-254.5-2.fc40.x86_64
tar-1.35-2.fc40.x86_64
unzip-6.0-62.fc39.x86_64
util-linux-2.39.2-1.fc40.x86_64
util-linux-core-2.39.2-1.fc40.x86_64
which-2.21-40.fc39.x86_64
xxhash-libs-0.8.2-1.fc39.x86_64
xz-5.4.4-1.fc39.x86_64
xz-libs-5.4.4-1.fc39.x86_64
zip-3.0-39.fc40.x86_64
zlib-1.2.13-4.fc39.x86_64
zstd-1.5.5-4.fc39.x86_64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1697328000
Wrote: /builddir/build/SRPMS/bout++-5.0.0-11.fc40.src.rpm
Finish: rpmbuild -bs
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-x86_64-1697538015.619643/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-x86_64-1697538015.619643/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-x86_64-1697538015.619643/root/var/log/dnf.log
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-wsl3x2cz/bout++/bout++.spec) Config(child) 0 minutes 39 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/bout++-5.0.0-11.fc40.src.rpm)  Config(fedora-rawhide-x86_64)
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1697538015.619643/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1697538015.619643/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1697538015.619643/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Finish: chroot init
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
  rpm-4.19.0-1.fc40.x86_64
  rpm-sequoia-1.5.0-1.fc40.x86_64
  python3-dnf-4.17.0-6.fc40.noarch
  python3-dnf-plugins-core-4.4.3-1.fc40.noarch
  yum-4.17.0-6.fc40.noarch
Start: build phase for bout++-5.0.0-11.fc40.src.rpm
Start: build setup for bout++-5.0.0-11.fc40.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1697328000
Wrote: /builddir/build/SRPMS/bout++-5.0.0-11.fc40.src.rpm
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository                                  71 kB/s | 1.5 kB     00:00    
Copr repository                                 1.8 MB/s |  85 kB     00:00    
fedora                                           89 kB/s |  24 kB     00:00    
Dependencies resolved.
===============================================================================================
 Package                                 Arch    Version                       Repo        Size
===============================================================================================
Installing:
 chrpath                                 x86_64  0.16-21.fc39                  fedora      30 k
 cmake                                   x86_64  3.27.7-1.fc40                 fedora     8.0 M
 doxygen                                 x86_64  2:1.9.8-1.fc40                fedora     5.3 M
 environment-modules                     x86_64  5.3.1-2.fc39                  fedora     703 k
 fftw-devel                              x86_64  3.3.10-7.fc39                 fedora     134 k
 flexiblas-devel                         x86_64  3.3.1-5.fc39                  fedora     117 k
 fmt-devel                               x86_64  10.0.0-3.fc39                 fedora     128 k
 gcc-c++                                 x86_64  13.2.1-4.fc40                 fedora      13 M
 gettext-devel                           x86_64  0.22-2.fc39                   fedora     236 k
 hdf5-devel                              x86_64  1.12.1-12.fc39                fedora     1.3 M
 hdf5-mpich-devel                        x86_64  1.12.1-12.fc39                fedora     1.3 M
 hdf5-openmpi-devel                      x86_64  1.12.1-12.fc39                fedora     1.3 M
 m4                                      x86_64  1.4.19-7.fc40                 fedora     303 k
 make                                    x86_64  1:4.4.1-2.fc39                fedora     589 k
 mpark-variant-devel                     x86_64  1.4.0-10.fc39                 fedora      27 k
 mpich-devel                             x86_64  4.1.2-7.fc40                  fedora     1.4 M
 netcdf-cxx4-devel                       x86_64  4.3.1-9.fc39                  fedora      73 k
 netcdf-devel                            x86_64  4.9.0-5.fc38                  fedora      99 k
 openmpi-devel                           x86_64  4.1.5-7.fc40                  fedora     1.3 M
 petsc-mpich-devel                       x86_64  3.19.6-1.fc40                 fedora     4.5 M
 petsc-openmpi-devel                     x86_64  3.19.6-1.fc40                 fedora     6.6 M
 python3                                 x86_64  3.12.0-2.fc40                 fedora      26 k
 python3-boutdata                        noarch  0.1.10-4.fc39                 fedora     187 k
 python3-boututils                       noarch  0.1.10-4.fc39                 fedora     167 k
 python3-cython                          x86_64  3.0.2-1.fc40                  fedora     3.8 M
 python3-devel                           x86_64  3.12.0-2.fc40                 fedora     311 k
 python3-jinja2                          noarch  3.1.2-6.fc40                  fedora     505 k
 python3-netcdf4                         x86_64  1.6.4-3.fc39                  fedora     620 k
 python3-numpy                           x86_64  1:1.26.0-1.fc40               fedora     7.5 M
 python3-scipy                           x86_64  1.11.1-1.fc39                 fedora      16 M
 python3-sphinx                          noarch  1:7.1.2-2.fc40                fedora     2.6 M
 python3-tables                          x86_64  3.8.0-6.fc40                  fedora     1.6 M
 sundials-devel                          x86_64  6.5.1-5.fc40                  fedora     888 k
 sundials-mpich-devel                    x86_64  6.5.1-5.fc40                  fedora     931 k
 sundials-openmpi-devel                  x86_64  6.5.1-5.fc40                  fedora     932 k
 zlib-devel                              x86_64  1.2.13-4.fc39                 fedora      45 k
Installing dependencies:
 MUMPS-common                            noarch  5.5.1-6.fc40                  fedora     830 k
 MUMPS-mpich                             x86_64  5.5.1-6.fc40                  fedora     1.9 M
 MUMPS-openmpi                           x86_64  5.5.1-6.fc40                  fedora     1.9 M
 SuperLUMT-common                        noarch  3.1.0-36.fc39                 fedora     642 k
 SuperLUMT64-double                      x86_64  3.1.0-36.fc39                 fedora      82 k
 abattis-cantarell-vf-fonts              noarch  0.301-10.fc39                 fedora     121 k
 adobe-mappings-cmap                     noarch  20230622-1.fc39               fedora     2.1 M
 adobe-mappings-cmap-deprecated          noarch  20230622-1.fc39               fedora     113 k
 adobe-mappings-pdf                      noarch  20190401-5.fc39               fedora     698 k
 annobin-docs                            noarch  12.28-1.fc40                  fedora      94 k
 annobin-plugin-gcc                      x86_64  12.28-1.fc40                  fedora     959 k
 avahi-libs                              x86_64  0.8-24.fc39                   fedora      67 k
 blosc                                   x86_64  1.21.4-2.fc39                 fedora      59 k
 blosc2                                  x86_64  2.10.0-2.fc39                 fedora     198 k
 cairo                                   x86_64  1.18.0-1.fc40                 fedora     710 k
 cairo-gobject                           x86_64  1.18.0-1.fc40                 fedora      19 k
 clang-libs                              x86_64  17.0.2-1.fc40                 fedora      23 M
 clang-resource-filesystem               noarch  17.0.2-1.fc40                 fedora      14 k
 cmake-data                              noarch  3.27.7-1.fc40                 fedora     2.2 M
 cmake-filesystem                        x86_64  3.27.7-1.fc40                 fedora      19 k
 cmake-rpm-macros                        noarch  3.27.7-1.fc40                 fedora      19 k
 cpp                                     x86_64  13.2.1-4.fc40                 fedora      11 M
 crypto-policies-scripts                 noarch  20230920-1.git570ea89.fc40    fedora     115 k
 cryptsetup-libs                         x86_64  2.6.1-3.fc39                  fedora     491 k
 cups-libs                               x86_64  1:2.4.7-1.fc40                fedora     269 k
 dbus                                    x86_64  1:1.14.10-1.fc40              fedora     8.1 k
 dbus-broker                             x86_64  33-2.fc39                     fedora     173 k
 dbus-common                             noarch  1:1.14.10-1.fc40              fedora      15 k
 dbus-libs                               x86_64  1:1.14.10-1.fc40              fedora     155 k
 default-fonts-core-sans                 noarch  4.0-9.fc40                    fedora      32 k
 dejavu-sans-fonts                       noarch  2.37-21.fc40                  fedora     1.3 M
 device-mapper                           x86_64  1.02.196-1.fc39               fedora     138 k
 device-mapper-libs                      x86_64  1.02.196-1.fc39               fedora     175 k
 emacs-filesystem                        noarch  1:29.1-2.fc40                 fedora     7.1 k
 expat                                   x86_64  2.5.0-3.fc39                  fedora     110 k
 fftw                                    x86_64  3.3.10-7.fc39                 fedora      45 k
 fftw-libs                               x86_64  3.3.10-7.fc39                 fedora     7.6 k
 fftw-libs-double                        x86_64  3.3.10-7.fc39                 fedora     1.2 M
 fftw-libs-long                          x86_64  3.3.10-7.fc39                 fedora     505 k
 fftw-libs-quad                          x86_64  3.3.10-7.fc39                 fedora     739 k
 fftw-libs-single                        x86_64  3.3.10-7.fc39                 fedora     1.2 M
 flexiblas                               x86_64  3.3.1-5.fc39                  fedora      33 k
 flexiblas-netlib                        x86_64  3.3.1-5.fc39                  fedora     3.1 M
 flexiblas-netlib64                      x86_64  3.3.1-5.fc39                  fedora     3.0 M
 flexiblas-openblas-openmp               x86_64  3.3.1-5.fc39                  fedora      17 k
 flexiblas-openblas-openmp64             x86_64  3.3.1-5.fc39                  fedora      17 k
 fmt                                     x86_64  10.0.0-3.fc39                 fedora     127 k
 fontconfig                              x86_64  2.14.2-5.fc40                 fedora     297 k
 fonts-filesystem                        noarch  1:2.0.5-12.fc39               fedora     8.2 k
 freetype                                x86_64  2.13.1-2.fc39                 fedora     414 k
 fribidi                                 x86_64  1.0.13-2.fc39                 fedora      91 k
 gc                                      x86_64  8.2.2-4.fc39                  fedora     110 k
 gcc                                     x86_64  13.2.1-4.fc40                 fedora      34 M
 gcc-gfortran                            x86_64  13.2.1-4.fc40                 fedora      12 M
 gcc-plugin-annobin                      x86_64  13.2.1-4.fc40                 fedora      49 k
 gd                                      x86_64  2.3.3-12.fc39                 fedora     139 k
 gdk-pixbuf2                             x86_64  2.42.10-5.fc39                fedora     484 k
 gettext                                 x86_64  0.22-2.fc39                   fedora     1.1 M
 gettext-common-devel                    noarch  0.22-2.fc39                   fedora     410 k
 gettext-envsubst                        x86_64  0.22-2.fc39                   fedora      36 k
 gettext-libs                            x86_64  0.22-2.fc39                   fedora     328 k
 gettext-runtime                         x86_64  0.22-2.fc39                   fedora     120 k
 glib2                                   x86_64  2.78.0-3.fc40                 fedora     2.8 M
 glibc-devel                             x86_64  2.38.9000-12.fc40             fedora      91 k
 glibc-headers-x86                       noarch  2.38.9000-12.fc40             fedora     576 k
 gnutls                                  x86_64  3.8.1-1.fc40                  fedora     1.1 M
 google-droid-sans-fonts                 noarch  20200215-17.fc40              fedora     2.7 M
 google-noto-fonts-common                noarch  20230801-3.fc40               fedora      17 k
 google-noto-sans-vf-fonts               noarch  20230801-3.fc40               fedora     583 k
 graphite2                               x86_64  1.3.14-12.fc39                fedora      95 k
 graphviz                                x86_64  9.0.0-2.fc40                  fedora     5.0 M
 groff-base                              x86_64  1.23.0-2.fc39                 fedora     1.1 M
 gts                                     x86_64  0.7.6-46.20121130.fc39        fedora     240 k
 guile22                                 x86_64  2.2.7-9.fc39                  fedora     6.5 M
 harfbuzz                                x86_64  8.2.1-2.fc40                  fedora     974 k
 hdf-libs                                x86_64  4.2.15-14.fc40                fedora     295 k
 hdf5                                    x86_64  1.12.1-12.fc39                fedora     2.2 M
 hdf5-mpich                              x86_64  1.12.1-12.fc39                fedora     2.1 M
 hdf5-openmpi                            x86_64  1.12.1-12.fc39                fedora     2.1 M
 highway                                 x86_64  1.0.7-1.fc40                  fedora     481 k
 hwloc-libs                              x86_64  2.9.3-1.fc40                  fedora     2.3 M
 hypre-mpich                             x86_64  2.24.0-8.fc40                 fedora     1.7 M
 hypre-openmpi                           x86_64  2.24.0-8.fc40                 fedora     1.7 M
 infinipath-psm                          x86_64  3.3-26_g604758e_open.6.fc37.6 fedora     198 k
 jbig2dec-libs                           x86_64  0.19-10.fc39                  fedora      73 k
 jbigkit-libs                            x86_64  2.1-26.fc39                   fedora      53 k
 json-c                                  x86_64  0.17-1.fc40                   fedora      43 k
 jsoncpp                                 x86_64  1.9.5-5.fc39                  fedora      99 k
 kbd                                     x86_64  2.6.3-1.fc40                  fedora     432 k
 kbd-legacy                              noarch  2.6.3-1.fc40                  fedora     574 k
 kbd-misc                                noarch  2.6.3-1.fc40                  fedora     1.6 M
 kernel-headers                          x86_64  6.6.0-0.rc5.git0.1.fc40       fedora     1.6 M
 kmod                                    x86_64  30-6.fc39                     fedora     120 k
 kmod-libs                               x86_64  30-6.fc39                     fedora      67 k
 lasi                                    x86_64  1.1.3-11.fc39                 fedora      54 k
 lcms2                                   x86_64  2.15-2.fc39                   fedora     177 k
 less                                    x86_64  643-1.fc40                    fedora     176 k
 libICE                                  x86_64  1.1.1-1.fc40                  fedora      74 k
 libSM                                   x86_64  1.2.4-1.fc40                  fedora      43 k
 libX11                                  x86_64  1.8.7-1.fc40                  fedora     647 k
 libX11-common                           noarch  1.8.7-1.fc40                  fedora     176 k
 libXau                                  x86_64  1.0.11-4.fc40                 fedora      31 k
 libXext                                 x86_64  1.3.5-4.fc40                  fedora      39 k
 libXft                                  x86_64  2.3.8-4.fc40                  fedora      72 k
 libXpm                                  x86_64  3.5.17-1.fc40                 fedora      65 k
 libXrender                              x86_64  0.9.11-4.fc40                 fedora      27 k
 libXt                                   x86_64  1.3.0-1.fc40                  fedora     179 k
 libaec                                  x86_64  1.0.6-5.fc39                  fedora      42 k
 libaec-devel                            x86_64  1.0.6-5.fc39                  fedora      12 k
 libaom                                  x86_64  3.7.0-1.fc40                  fedora     1.8 M
 libargon2                               x86_64  20190702-3.fc39               fedora      28 k
 libavif                                 x86_64  0.11.1-11.fc39                fedora      84 k
 libb2                                   x86_64  0.98.1-9.fc39                 fedora      25 k
 libcbor                                 x86_64  0.10.2-2.fc39                 fedora      58 k
 libcurl-devel                           x86_64  8.4.0-1.fc40                  fedora     1.0 M
 libdatrie                               x86_64  0.2.13-7.fc39                 fedora      32 k
 libdav1d                                x86_64  1.2.1-2.fc39                  fedora     618 k
 libedit                                 x86_64  3.1-48.20230828cvs.fc40       fedora     107 k
 libfabric                               x86_64  1.19.0-1.fc40                 fedora     1.6 M
 libfido2                                x86_64  1.13.0-3.fc39                 fedora      98 k
 libgfortran                             x86_64  13.2.1-4.fc40                 fedora     899 k
 libgs                                   x86_64  10.01.2-3.fc39                fedora     3.5 M
 libibumad                               x86_64  48.0-1.fc40                   fedora      26 k
 libibverbs                              x86_64  48.0-1.fc40                   fedora     435 k
 libijs                                  x86_64  0.35-19.fc39                  fedora      29 k
 libimagequant                           x86_64  4.0.1-5.fc39                  fedora     308 k
 libjpeg-turbo                           x86_64  2.1.4-3.fc39                  fedora     183 k
 libjxl                                  x86_64  1:0.8.2-3.fc40                fedora     1.2 M
 liblerc                                 x86_64  4.0.0-4.fc39                  fedora     201 k
 libmpc                                  x86_64  1.3.1-3.fc39                  fedora      70 k
 libnl3                                  x86_64  3.8.0-1.fc40                  fedora     348 k
 libpaper                                x86_64  1:2.1.1-1.fc39                fedora      27 k
 libpipeline                             x86_64  1.5.7-3.fc39                  fedora      52 k
 libpng                                  x86_64  2:1.6.40-1.fc40               fedora     119 k
 libpsm2                                 x86_64  11.2.230-2.fc39               fedora     200 k
 libqhull_r                              x86_64  1:8.0.2-2.fc40                fedora     199 k
 libquadmath                             x86_64  13.2.1-4.fc40                 fedora     196 k
 libquadmath-devel                       x86_64  13.2.1-4.fc40                 fedora      38 k
 libraqm                                 x86_64  0.8.0-5.fc39                  fedora      20 k
 librdmacm                               x86_64  48.0-1.fc40                   fedora      72 k
 librsvg2                                x86_64  2.57.0-3.fc40                 fedora     1.6 M
 libseccomp                              x86_64  2.5.3-6.fc39                  fedora      71 k
 libstdc++-devel                         x86_64  13.2.1-4.fc40                 fedora     2.6 M
 libthai                                 x86_64  0.1.29-6.fc39                 fedora     213 k
 libtiff                                 x86_64  4.5.0-3.fc40                  fedora     305 k
 libtool-ltdl                            x86_64  2.4.7-8.fc40                  fedora      36 k
 libuv                                   x86_64  1:1.46.0-4.fc40               fedora     248 k
 libvmaf                                 x86_64  2.3.0-6.fc39                  fedora     180 k
 libwebp                                 x86_64  1.3.2-2.fc40                  fedora     284 k
 libxcb                                  x86_64  1.16-2.fc40                   fedora     238 k
 libxcrypt-devel                         x86_64  4.4.36-2.fc39                 fedora      30 k
 libxslt                                 x86_64  1.1.38-3.fc39                 fedora     187 k
 llvm-libs                               x86_64  17.0.2-1.fc40                 fedora      27 M
 lzo                                     x86_64  2.10-9.fc39                   fedora      66 k
 man-db                                  x86_64  2.12.0-3.fc40                 fedora     1.3 M
 metis                                   x86_64  5.1.0.3-2.fc39                fedora     572 k
 mpdecimal                               x86_64  2.5.1-7.fc39                  fedora      89 k
 mpich                                   x86_64  4.1.2-7.fc40                  fedora     2.1 M
 munge-libs                              x86_64  0.5.15-5.fc39                 fedora      20 k
 ncurses                                 x86_64  6.4-8.20231001.fc40           fedora     418 k
 netcdf                                  x86_64  4.9.0-5.fc38                  fedora     833 k
 netcdf-cxx4                             x86_64  4.3.1-9.fc39                  fedora      87 k
 netpbm                                  x86_64  11.02.00-2.fc39               fedora     185 k
 nettle                                  x86_64  3.9.1-2.fc39                  fedora     425 k
 nspr                                    x86_64  4.35.0-14.fc40                fedora     137 k
 nss                                     x86_64  3.94.0-1.fc40                 fedora     695 k
 nss-softokn                             x86_64  3.94.0-1.fc40                 fedora     413 k
 nss-softokn-freebl                      x86_64  3.94.0-1.fc40                 fedora     350 k
 nss-sysinit                             x86_64  3.94.0-1.fc40                 fedora      18 k
 nss-util                                x86_64  3.94.0-1.fc40                 fedora      87 k
 numactl-libs                            x86_64  2.0.16-3.fc39                 fedora      30 k
 openblas                                x86_64  0.3.21-6.fc39                 fedora      35 k
 openblas-openmp                         x86_64  0.3.21-6.fc39                 fedora     4.9 M
 openblas-openmp64                       x86_64  0.3.21-6.fc39                 fedora     4.8 M
 openjpeg2                               x86_64  2.5.0-5.fc40                  fedora     178 k
 openmpi                                 x86_64  4.1.5-7.fc40                  fedora     2.7 M
 opensm-libs                             x86_64  3.3.24-6.fc39                 fedora      73 k
 openssh                                 x86_64  9.3p1-11.fc40                 fedora     438 k
 openssh-clients                         x86_64  9.3p1-11.fc40                 fedora     734 k
 orangefs                                x86_64  2.9.8-9.fc39                  fedora     1.8 M
 pango                                   x86_64  1.51.0-1.fc40                 fedora     343 k
 perl-AutoLoader                         noarch  5.74-502.fc40                 fedora      21 k
 perl-B                                  x86_64  1.88-502.fc40                 fedora     177 k
 perl-Carp                               noarch  1.54-500.fc39                 fedora      29 k
 perl-Class-Struct                       noarch  0.68-502.fc40                 fedora      22 k
 perl-Data-Dumper                        x86_64  2.188-501.fc39                fedora      56 k
 perl-Digest                             noarch  1.20-500.fc39                 fedora      25 k
 perl-Digest-MD5                         x86_64  2.58-501.fc40                 fedora      35 k
 perl-DynaLoader                         x86_64  1.54-502.fc40                 fedora      26 k
 perl-Encode                             x86_64  4:3.19-500.fc39               fedora     1.7 M
 perl-Errno                              x86_64  1.37-502.fc40                 fedora      15 k
 perl-Exporter                           noarch  5.77-500.fc39                 fedora      31 k
 perl-Fcntl                              x86_64  1.15-502.fc40                 fedora      21 k
 perl-File-Basename                      noarch  2.86-502.fc40                 fedora      17 k
 perl-File-Path                          noarch  2.18-500.fc39                 fedora      35 k
 perl-File-Temp                          noarch  1:0.231.100-500.fc39          fedora      58 k
 perl-File-stat                          noarch  1.13-502.fc40                 fedora      17 k
 perl-FileHandle                         noarch  2.05-502.fc40                 fedora      16 k
 perl-Getopt-Long                        noarch  1:2.54-500.fc39               fedora      60 k
 perl-Getopt-Std                         noarch  1.13-502.fc40                 fedora      16 k
 perl-HTTP-Tiny                          noarch  0.088-3.fc39                  fedora      56 k
 perl-IO                                 x86_64  1.52-502.fc40                 fedora      82 k
 perl-IO-Socket-IP                       noarch  0.42-1.fc39                   fedora      42 k
 perl-IO-Socket-SSL                      noarch  2.083-3.fc39                  fedora     225 k
 perl-IPC-Open3                          noarch  1.22-502.fc40                 fedora      22 k
 perl-MIME-Base64                        x86_64  3.16-500.fc39                 fedora      29 k
 perl-Mozilla-CA                         noarch  20230821-1.fc40               fedora      13 k
 perl-Net-SSLeay                         x86_64  1.92-10.fc39                  fedora     360 k
 perl-POSIX                              x86_64  2.13-502.fc40                 fedora      97 k
 perl-PathTools                          x86_64  3.89-500.fc39                 fedora      87 k
 perl-Pod-Escapes                        noarch  1:1.07-501.fc40               fedora      19 k
 perl-Pod-Perldoc                        noarch  3.28.01-501.fc39              fedora      86 k
 perl-Pod-Simple                         noarch  1:3.45-4.fc39                 fedora     218 k
 perl-Pod-Usage                          noarch  4:2.03-500.fc39               fedora      39 k
 perl-Scalar-List-Utils                  x86_64  5:1.63-500.fc39               fedora      72 k
 perl-SelectSaver                        noarch  1.02-502.fc40                 fedora      12 k
 perl-Socket                             x86_64  4:2.037-3.fc39                fedora      55 k
 perl-Storable                           x86_64  1:3.32-500.fc39               fedora      99 k
 perl-Symbol                             noarch  1.09-502.fc40                 fedora      14 k
 perl-Term-ANSIColor                     noarch  5.01-501.fc39                 fedora      47 k
 perl-Term-Cap                           noarch  1.18-500.fc39                 fedora      22 k
 perl-Text-ParseWords                    noarch  3.31-500.fc39                 fedora      16 k
 perl-Text-Tabs+Wrap                     noarch  2023.0511-3.fc39              fedora      22 k
 perl-Time-Local                         noarch  2:1.350-3.fc39                fedora      34 k
 perl-URI                                noarch  5.21-1.fc40                   fedora     125 k
 perl-base                               noarch  2.27-502.fc40                 fedora      16 k
 perl-constant                           noarch  1.33-501.fc39                 fedora      22 k
 perl-if                                 noarch  0.61.000-502.fc40             fedora      14 k
 perl-interpreter                        x86_64  4:5.38.0-502.fc40             fedora      72 k
 perl-libnet                             noarch  3.15-501.fc39                 fedora     129 k
 perl-libs                               x86_64  4:5.38.0-502.fc40             fedora     2.3 M
 perl-locale                             noarch  1.10-502.fc40                 fedora      14 k
 perl-mro                                x86_64  1.28-502.fc40                 fedora      29 k
 perl-overload                           noarch  1.37-502.fc40                 fedora      46 k
 perl-overloading                        noarch  0.02-502.fc40                 fedora      13 k
 perl-parent                             noarch  1:0.241-500.fc39              fedora      14 k
 perl-podlators                          noarch  1:5.01-500.fc39               fedora     125 k
 perl-vars                               noarch  1.05-502.fc40                 fedora      13 k
 petsc-mpich                             x86_64  3.19.6-1.fc40                 fedora     7.2 M
 petsc-openmpi                           x86_64  3.19.6-1.fc40                 fedora     7.5 M
 pixman                                  x86_64  0.42.2-2.fc39                 fedora     288 k
 pmix                                    x86_64  4.1.3-1.fc40                  fedora     678 k
 poppler                                 x86_64  23.08.0-1.fc39                fedora     1.2 M
 poppler-data                            noarch  0.4.11-5.fc39                 fedora     2.0 M
 poppler-glib                            x86_64  23.08.0-1.fc39                fedora     185 k
 procps-ng                               x86_64  4.0.3-5.fc40                  fedora     373 k
 ptscotch-mpich                          x86_64  7.0.4-1.fc40                  fedora     400 k
 ptscotch-mpich-devel                    x86_64  7.0.4-1.fc40                  fedora      48 k
 ptscotch-mpich-devel-parmetis           x86_64  7.0.4-1.fc40                  fedora      14 k
 ptscotch-openmpi                        x86_64  7.0.4-1.fc40                  fedora     402 k
 ptscotch-openmpi-devel                  x86_64  7.0.4-1.fc40                  fedora      48 k
 pyproject-rpm-macros                    noarch  1.10.0-1.fc40                 fedora      41 k
 python-pip-wheel                        noarch  23.2.1-1.fc39                 fedora     1.5 M
 python-rpm-macros                       noarch  3.12-4.fc40                   fedora      19 k
 python3-appdirs                         noarch  1.4.4-11.fc39                 fedora      23 k
 python3-babel                           noarch  2.12.1-6.fc40                 copr_base  6.8 M
 python3-blosc2                          x86_64  2.2.5-3.fc39                  fedora     290 k
 python3-brotli                          x86_64  1.1.0-1.fc40                  fedora     337 k
 python3-cairo                           x86_64  1.25.0-1.fc40                 fedora     128 k
 python3-certifi                         noarch  2023.05.07-2.fc39             fedora      14 k
 python3-cftime                          x86_64  1.6.2-1.fc39                  fedora     214 k
 python3-charset-normalizer              noarch  3.3.0-1.fc40                  fedora     107 k
 python3-contourpy                       x86_64  1.1.1-1.fc40                  fedora     243 k
 python3-cpuinfo                         noarch  9.0.0-5.fc39                  fedora      68 k
 python3-cycler                          noarch  0.11.0-9.fc39                 fedora      21 k
 python3-dateutil                        noarch  1:2.8.2-10.fc39               fedora     355 k
 python3-docutils                        noarch  0.20.1-1.fc40                 fedora     1.0 M
 python3-fonttools                       x86_64  4.43.1-1.fc40                 fedora     2.9 M
 python3-fs                              noarch  2.4.16-5.fc39                 fedora     302 k
 python3-idna                            noarch  3.4-5.fc40                    fedora     109 k
 python3-imagesize                       noarch  1.4.1-5.fc40                  fedora      22 k
 python3-kiwisolver                      x86_64  1.4.5-1.fc40                  fedora      68 k
 python3-libs                            x86_64  3.12.0-2.fc40                 fedora     9.2 M
 python3-lxml                            x86_64  4.9.3-2.fc39                  fedora     1.4 M
 python3-markupsafe                      x86_64  2.1.3-2.fc39                  fedora      30 k
 python3-matplotlib                      x86_64  3.8.0-1.fc40                  fedora     4.4 M
 python3-matplotlib-data                 noarch  3.8.0-1.fc40                  fedora     524 k
 python3-matplotlib-data-fonts           noarch  3.8.0-1.fc40                  fedora     2.3 M
 python3-matplotlib-tk                   x86_64  3.8.0-1.fc40                  fedora      47 k
 python3-mpmath                          noarch  1.3.0-3.fc39                  fedora     1.1 M
 python3-msgpack                         x86_64  1.0.6-1.fc40                  fedora     122 k
 python3-natsort                         noarch  7.1.1-10.fc39                 fedora      70 k
 python3-ndindex                         x86_64  1.7-9.fc39                    fedora     753 k
 python3-numexpr                         x86_64  2.8.5-2.fc40                  fedora     165 k
 python3-numpy-f2py                      x86_64  1:1.26.0-1.fc40               fedora     509 k
 python3-olefile                         noarch  0.46-21.fc39                  fedora      66 k
 python3-packaging                       noarch  23.2-2.fc40                   fedora     125 k
 python3-pillow                          x86_64  10.0.1-1.fc40                 fedora     914 k
 python3-pillow-tk                       x86_64  10.0.1-1.fc40                 fedora      29 k
 python3-pooch                           noarch  1.5.2-12.fc39                 fedora     126 k
 python3-pygments                        noarch  2.16.1-1.fc40                 fedora     2.4 M
 python3-pyparsing                       noarch  3.0.9-11.fc39                 fedora     254 k
 python3-requests                        noarch  2.31.0-1.fc40                 copr_base  142 k
 python3-rpm-generators                  noarch  14-8.fc40                     fedora      30 k
 python3-rpm-macros                      noarch  3.12-4.fc40                   fedora      14 k
 python3-setuptools                      noarch  68.2.2-1.fc40                 fedora     1.5 M
 python3-six                             noarch  1.16.0-12.fc39                fedora      41 k
 python3-snowballstemmer                 noarch  2.2.0-7.fc39                  fedora     257 k
 python3-sphinx-theme-alabaster          noarch  0.7.12-19.fc39                fedora      29 k
 python3-sphinxcontrib-applehelp         noarch  1.0.6-1.fc40                  fedora      45 k
 python3-sphinxcontrib-devhelp           noarch  1.0.2-14.fc39                 fedora      41 k
 python3-sphinxcontrib-htmlhelp          noarch  2.0.3-1.fc40                  fedora      54 k
 python3-sphinxcontrib-jsmath            noarch  1.0.1-22.fc39                 fedora      17 k
 python3-sphinxcontrib-qthelp            noarch  1.0.3-15.fc39                 fedora      47 k
 python3-sphinxcontrib-serializinghtml   noarch  1.1.5-10.fc39                 fedora      47 k
 python3-sympy                           x86_64  1.12-2.fc39                   fedora      14 M
 python3-tkinter                         x86_64  3.12.0-2.fc40                 fedora     407 k
 python3-urllib3                         noarch  1.26.17-2.fc40                fedora     274 k
 rav1e-libs                              x86_64  0.6.6-3.fc40                  fedora     1.0 M
 rhash                                   x86_64  1.4.3-3.fc39                  fedora     194 k
 rpm-mpi-hooks                           noarch  8-6.fc39                      fedora      11 k
 rsvg-pixbuf-loader                      x86_64  2.57.0-3.fc40                 fedora      16 k
 scalapack-common                        x86_64  2.2.0-6.fc40                  fedora      18 k
 scalapack-mpich                         x86_64  2.2.0-6.fc40                  fedora     1.7 M
 scalapack-openmpi                       x86_64  2.2.0-6.fc40                  fedora     1.7 M
 shared-mime-info                        x86_64  2.3-1.fc40                    fedora     391 k
 snappy                                  x86_64  1.1.10-2.fc39                 fedora      37 k
 suitesparse                             x86_64  5.13.0-4.fc40                 fedora     1.1 M
 suitesparse64                           x86_64  5.13.0-4.fc40                 fedora     1.1 M
 sundials                                x86_64  6.5.1-5.fc40                  fedora     1.1 M
 sundials-mpich                          x86_64  6.5.1-5.fc40                  fedora     1.2 M
 sundials-openmpi                        x86_64  6.5.1-5.fc40                  fedora     1.2 M
 superlu_dist-mpich                      x86_64  1:8.1.2-6.fc40                fedora     485 k
 superlu_dist-mpich-devel                x86_64  1:8.1.2-6.fc40                fedora     118 k
 superlu_dist-openmpi                    x86_64  1:8.1.2-6.fc40                fedora     489 k
 superlu_dist-openmpi-devel              x86_64  1:8.1.2-6.fc40                fedora     118 k
 svt-av1-libs                            x86_64  1.4.1-3.fc39                  fedora     2.0 M
 systemd                                 x86_64  254.5-2.fc40                  fedora     4.7 M
 systemd-pam                             x86_64  254.5-2.fc40                  fedora     363 k
 systemd-rpm-macros                      noarch  254.5-2.fc40                  fedora      31 k
 systemd-udev                            x86_64  254.5-2.fc40                  fedora     2.1 M
 tcl                                     x86_64  1:8.6.13-1.fc40               fedora     1.1 M
 tcsh                                    x86_64  6.24.10-2.fc39                fedora     463 k
 tk                                      x86_64  1:8.6.13-1.fc40               fedora     1.6 M
 tzdata                                  noarch  2023c-4.fc40                  fedora     717 k
 ucx                                     x86_64  1.14.1-4.fc39                 fedora     781 k
 urw-base35-bookman-fonts                noarch  20200910-18.fc39              fedora     847 k
 urw-base35-c059-fonts                   noarch  20200910-18.fc39              fedora     874 k
 urw-base35-d050000l-fonts               noarch  20200910-18.fc39              fedora      76 k
 urw-base35-fonts                        noarch  20200910-18.fc39              fedora      10 k
 urw-base35-fonts-common                 noarch  20200910-18.fc39              fedora      21 k
 urw-base35-gothic-fonts                 noarch  20200910-18.fc39              fedora     643 k
 urw-base35-nimbus-mono-ps-fonts         noarch  20200910-18.fc39              fedora     795 k
 urw-base35-nimbus-roman-fonts           noarch  20200910-18.fc39              fedora     856 k
 urw-base35-nimbus-sans-fonts            noarch  20200910-18.fc39              fedora     1.3 M
 urw-base35-p052-fonts                   noarch  20200910-18.fc39              fedora     974 k
 urw-base35-standard-symbols-ps-fonts    noarch  20200910-18.fc39              fedora      42 k
 urw-base35-z003-fonts                   noarch  20200910-18.fc39              fedora     276 k
 vim-filesystem                          noarch  2:9.0.1984-2.fc40             fedora      18 k
 xapian-core-libs                        x86_64  1.4.23-1.fc39                 fedora     771 k
 xml-common                              noarch  0.6.3-61.fc39                 fedora      31 k
 yaksa                                   x86_64  0.2-3.fc37                    fedora     6.5 M
 zlib-ng                                 x86_64  2.1.3-2.fc39                  fedora      84 k

Transaction Summary
===============================================================================================
Install  389 Packages

Total size: 426 M
Total download size: 347 M
Installed size: 1.6 G
Downloading Packages:
[SKIPPED] python3-requests-2.31.0-1.fc40.noarch.rpm: Already downloaded        
[SKIPPED] annobin-docs-12.28-1.fc40.noarch.rpm: Already downloaded             
[SKIPPED] annobin-plugin-gcc-12.28-1.fc40.x86_64.rpm: Already downloaded       
[SKIPPED] cpp-13.2.1-4.fc40.x86_64.rpm: Already downloaded                     
[SKIPPED] expat-2.5.0-3.fc39.x86_64.rpm: Already downloaded                    
[SKIPPED] gc-8.2.2-4.fc39.x86_64.rpm: Already downloaded                       
[SKIPPED] gcc-13.2.1-4.fc40.x86_64.rpm: Already downloaded                     
[SKIPPED] gcc-plugin-annobin-13.2.1-4.fc40.x86_64.rpm: Already downloaded      
[SKIPPED] glibc-devel-2.38.9000-12.fc40.x86_64.rpm: Already downloaded         
[SKIPPED] glibc-headers-x86-2.38.9000-12.fc40.noarch.rpm: Already downloaded   
[SKIPPED] gnutls-3.8.1-1.fc40.x86_64.rpm: Already downloaded                   
[SKIPPED] guile22-2.2.7-9.fc39.x86_64.rpm: Already downloaded                  
[SKIPPED] json-c-0.17-1.fc40.x86_64.rpm: Already downloaded                    
[SKIPPED] kernel-headers-6.6.0-0.rc5.git0.1.fc40.x86_64.rpm: Already downloaded
[SKIPPED] libb2-0.98.1-9.fc39.x86_64.rpm: Already downloaded                   
[SKIPPED] libmpc-1.3.1-3.fc39.x86_64.rpm: Already downloaded                   
[SKIPPED] libtool-ltdl-2.4.7-8.fc40.x86_64.rpm: Already downloaded             
[SKIPPED] libxcrypt-devel-4.4.36-2.fc39.x86_64.rpm: Already downloaded         
[SKIPPED] make-4.4.1-2.fc39.x86_64.rpm: Already downloaded                     
[SKIPPED] mpdecimal-2.5.1-7.fc39.x86_64.rpm: Already downloaded                
[SKIPPED] nettle-3.9.1-2.fc39.x86_64.rpm: Already downloaded                   
[SKIPPED] pyproject-rpm-macros-1.10.0-1.fc40.noarch.rpm: Already downloaded    
[SKIPPED] python-pip-wheel-23.2.1-1.fc39.noarch.rpm: Already downloaded        
[SKIPPED] python-rpm-macros-3.12-4.fc40.noarch.rpm: Already downloaded         
[SKIPPED] python3-3.12.0-2.fc40.x86_64.rpm: Already downloaded                 
[SKIPPED] python3-charset-normalizer-3.3.0-1.fc40.noarch.rpm: Already downloaded
[SKIPPED] python3-dateutil-2.8.2-10.fc39.noarch.rpm: Already downloaded        
[SKIPPED] python3-devel-3.12.0-2.fc40.x86_64.rpm: Already downloaded           
[SKIPPED] python3-docutils-0.20.1-1.fc40.noarch.rpm: Already downloaded        
[SKIPPED] python3-idna-3.4-5.fc40.noarch.rpm: Already downloaded               
[SKIPPED] python3-imagesize-1.4.1-5.fc40.noarch.rpm: Already downloaded        
[SKIPPED] python3-jinja2-3.1.2-6.fc40.noarch.rpm: Already downloaded           
[SKIPPED] python3-libs-3.12.0-2.fc40.x86_64.rpm: Already downloaded            
[SKIPPED] python3-markupsafe-2.1.3-2.fc39.x86_64.rpm: Already downloaded       
[SKIPPED] python3-packaging-23.2-2.fc40.noarch.rpm: Already downloaded         
[SKIPPED] python3-pygments-2.16.1-1.fc40.noarch.rpm: Already downloaded        
[SKIPPED] python3-rpm-generators-14-8.fc40.noarch.rpm: Already downloaded      
[SKIPPED] python3-rpm-macros-3.12-4.fc40.noarch.rpm: Already downloaded        
[SKIPPED] python3-setuptools-68.2.2-1.fc40.noarch.rpm: Already downloaded      
[SKIPPED] python3-six-1.16.0-12.fc39.noarch.rpm: Already downloaded            
[SKIPPED] python3-snowballstemmer-2.2.0-7.fc39.noarch.rpm: Already downloaded  
[SKIPPED] python3-sphinx-7.1.2-2.fc40.noarch.rpm: Already downloaded           
[SKIPPED] python3-sphinx-theme-alabaster-0.7.12-19.fc39.noarch.rpm: Already downloaded
[SKIPPED] python3-sphinxcontrib-applehelp-1.0.6-1.fc40.noarch.rpm: Already downloaded
[SKIPPED] python3-sphinxcontrib-devhelp-1.0.2-14.fc39.noarch.rpm: Already downloaded
[SKIPPED] python3-sphinxcontrib-htmlhelp-2.0.3-1.fc40.noarch.rpm: Already downloaded
[SKIPPED] python3-sphinxcontrib-jsmath-1.0.1-22.fc39.noarch.rpm: Already downloaded
[SKIPPED] python3-sphinxcontrib-qthelp-1.0.3-15.fc39.noarch.rpm: Already downloaded
[SKIPPED] python3-sphinxcontrib-serializinghtml-1.1.5-10.fc39.noarch.rpm: Already downloaded
[SKIPPED] python3-urllib3-1.26.17-2.fc40.noarch.rpm: Already downloaded        
[SKIPPED] tzdata-2023c-4.fc40.noarch.rpm: Already downloaded                   
(52/389): python3-babel-2.12.1-6.fc40.noarch.rp 183 MB/s | 6.8 MB     00:00    
(53/389): MUMPS-common-5.5.1-6.fc40.noarch.rpm   18 MB/s | 830 kB     00:00    
(54/389): MUMPS-mpich-5.5.1-6.fc40.x86_64.rpm    37 MB/s | 1.9 MB     00:00    
(55/389): SuperLUMT64-double-3.1.0-36.fc39.x86_ 5.6 MB/s |  82 kB     00:00    
(56/389): abattis-cantarell-vf-fonts-0.301-10.f  34 MB/s | 121 kB     00:00    
(57/389): MUMPS-openmpi-5.5.1-6.fc40.x86_64.rpm  46 MB/s | 1.9 MB     00:00    
(58/389): adobe-mappings-cmap-deprecated-202306  42 MB/s | 113 kB     00:00    
(59/389): adobe-mappings-pdf-20190401-5.fc39.no 127 MB/s | 698 kB     00:00    
(60/389): SuperLUMT-common-3.1.0-36.fc39.noarch  14 MB/s | 642 kB     00:00    
(61/389): avahi-libs-0.8-24.fc39.x86_64.rpm      17 MB/s |  67 kB     00:00    
(62/389): blosc-1.21.4-2.fc39.x86_64.rpm         16 MB/s |  59 kB     00:00    
(63/389): adobe-mappings-cmap-20230622-1.fc39.n  69 MB/s | 2.1 MB     00:00    
(64/389): cairo-1.18.0-1.fc40.x86_64.rpm         78 MB/s | 710 kB     00:00    
(65/389): cairo-gobject-1.18.0-1.fc40.x86_64.rp  10 MB/s |  19 kB     00:00    
(66/389): chrpath-0.16-21.fc39.x86_64.rpm       4.9 MB/s |  30 kB     00:00    
(67/389): blosc2-2.10.0-2.fc39.x86_64.rpm       9.1 MB/s | 198 kB     00:00    
(68/389): clang-resource-filesystem-17.0.2-1.fc 2.7 MB/s |  14 kB     00:00    
(69/389): cmake-data-3.27.7-1.fc40.noarch.rpm   110 MB/s | 2.2 MB     00:00    
(70/389): cmake-filesystem-3.27.7-1.fc40.x86_64 2.3 MB/s |  19 kB     00:00    
(71/389): cmake-3.27.7-1.fc40.x86_64.rpm        155 MB/s | 8.0 MB     00:00    
(72/389): cmake-rpm-macros-3.27.7-1.fc40.noarch 827 kB/s |  19 kB     00:00    
(73/389): crypto-policies-scripts-20230920-1.gi  17 MB/s | 115 kB     00:00    
(74/389): cryptsetup-libs-2.6.1-3.fc39.x86_64.r  78 MB/s | 491 kB     00:00    
(75/389): cups-libs-2.4.7-1.fc40.x86_64.rpm      43 MB/s | 269 kB     00:00    
(76/389): dbus-1.14.10-1.fc40.x86_64.rpm        2.4 MB/s | 8.1 kB     00:00    
(77/389): clang-libs-17.0.2-1.fc40.x86_64.rpm   201 MB/s |  23 MB     00:00    
(78/389): dbus-broker-33-2.fc39.x86_64.rpm      6.7 MB/s | 173 kB     00:00    
(79/389): dbus-common-1.14.10-1.fc40.noarch.rpm 613 kB/s |  15 kB     00:00    
(80/389): dbus-libs-1.14.10-1.fc40.x86_64.rpm    77 MB/s | 155 kB     00:00    
(81/389): device-mapper-1.02.196-1.fc39.x86_64.  37 MB/s | 138 kB     00:00    
(82/389): default-fonts-core-sans-4.0-9.fc40.no 5.6 MB/s |  32 kB     00:00    
(83/389): device-mapper-libs-1.02.196-1.fc39.x8  58 MB/s | 175 kB     00:00    
(84/389): emacs-filesystem-29.1-2.fc40.noarch.r 1.3 MB/s | 7.1 kB     00:00    
(85/389): doxygen-1.9.8-1.fc40.x86_64.rpm       237 MB/s | 5.3 MB     00:00    
(86/389): dejavu-sans-fonts-2.37-21.fc40.noarch  43 MB/s | 1.3 MB     00:00    
(87/389): environment-modules-5.3.1-2.fc39.x86_  32 MB/s | 703 kB     00:00    
(88/389): fftw-3.3.10-7.fc39.x86_64.rpm         4.3 MB/s |  45 kB     00:00    
(89/389): fftw-libs-3.3.10-7.fc39.x86_64.rpm    667 kB/s | 7.6 kB     00:00    
(90/389): fftw-devel-3.3.10-7.fc39.x86_64.rpm   5.2 MB/s | 134 kB     00:00    
(91/389): fftw-libs-double-3.3.10-7.fc39.x86_64  52 MB/s | 1.2 MB     00:00    
(92/389): fftw-libs-long-3.3.10-7.fc39.x86_64.r  23 MB/s | 505 kB     00:00    
(93/389): flexiblas-3.3.1-5.fc39.x86_64.rpm      12 MB/s |  33 kB     00:00    
(94/389): flexiblas-devel-3.3.1-5.fc39.x86_64.r  25 MB/s | 117 kB     00:00    
(95/389): fftw-libs-quad-3.3.10-7.fc39.x86_64.r  31 MB/s | 739 kB     00:00    
(96/389): fftw-libs-single-3.3.10-7.fc39.x86_64  59 MB/s | 1.2 MB     00:00    
(97/389): flexiblas-openblas-openmp-3.3.1-5.fc3 4.1 MB/s |  17 kB     00:00    
(98/389): flexiblas-openblas-openmp64-3.3.1-5.f 2.8 MB/s |  17 kB     00:00    
(99/389): flexiblas-netlib-3.3.1-5.fc39.x86_64. 141 MB/s | 3.1 MB     00:00    
(100/389): fmt-10.0.0-3.fc39.x86_64.rpm          24 MB/s | 127 kB     00:00    
(101/389): fontconfig-2.14.2-5.fc40.x86_64.rpm   51 MB/s | 297 kB     00:00    
(102/389): fmt-devel-10.0.0-3.fc39.x86_64.rpm    16 MB/s | 128 kB     00:00    
(103/389): fonts-filesystem-2.0.5-12.fc39.noarc 1.2 MB/s | 8.2 kB     00:00    
(104/389): freetype-2.13.1-2.fc39.x86_64.rpm     38 MB/s | 414 kB     00:00    
(105/389): fribidi-1.0.13-2.fc39.x86_64.rpm      17 MB/s |  91 kB     00:00    
(106/389): flexiblas-netlib64-3.3.1-5.fc39.x86_  57 MB/s | 3.0 MB     00:00    
(107/389): gd-2.3.3-12.fc39.x86_64.rpm           40 MB/s | 139 kB     00:00    
(108/389): gdk-pixbuf2-2.42.10-5.fc39.x86_64.rp  31 MB/s | 484 kB     00:00    
(109/389): gettext-0.22-2.fc39.x86_64.rpm        73 MB/s | 1.1 MB     00:00    
(110/389): gettext-common-devel-0.22-2.fc39.noa  41 MB/s | 410 kB     00:00    
(111/389): gcc-c++-13.2.1-4.fc40.x86_64.rpm     155 MB/s |  13 MB     00:00    
(112/389): gettext-devel-0.22-2.fc39.x86_64.rpm 8.1 MB/s | 236 kB     00:00    
(113/389): gettext-envsubst-0.22-2.fc39.x86_64. 8.2 MB/s |  36 kB     00:00    
(114/389): gcc-gfortran-13.2.1-4.fc40.x86_64.rp 115 MB/s |  12 MB     00:00    
(115/389): gettext-libs-0.22-2.fc39.x86_64.rpm   18 MB/s | 328 kB     00:00    
(116/389): gettext-runtime-0.22-2.fc39.x86_64.r 7.6 MB/s | 120 kB     00:00    
(117/389): google-noto-fonts-common-20230801-3. 2.5 MB/s |  17 kB     00:00    
(118/389): google-noto-sans-vf-fonts-20230801-3  68 MB/s | 583 kB     00:00    
(119/389): glib2-2.78.0-3.fc40.x86_64.rpm       133 MB/s | 2.8 MB     00:00    
(120/389): graphite2-1.3.14-12.fc39.x86_64.rpm   20 MB/s |  95 kB     00:00    
(121/389): groff-base-1.23.0-2.fc39.x86_64.rpm   94 MB/s | 1.1 MB     00:00    
(122/389): graphviz-9.0.0-2.fc40.x86_64.rpm     222 MB/s | 5.0 MB     00:00    
(123/389): gts-0.7.6-46.20121130.fc39.x86_64.rp  27 MB/s | 240 kB     00:00    
(124/389): harfbuzz-8.2.1-2.fc40.x86_64.rpm     114 MB/s | 974 kB     00:00    
(125/389): hdf-libs-4.2.15-14.fc40.x86_64.rpm    32 MB/s | 295 kB     00:00    
(126/389): google-droid-sans-fonts-20200215-17.  45 MB/s | 2.7 MB     00:00    
(127/389): hdf5-1.12.1-12.fc39.x86_64.rpm        56 MB/s | 2.2 MB     00:00    
(128/389): hdf5-mpich-devel-1.12.1-12.fc39.x86_  10 MB/s | 1.3 MB     00:00    
(129/389): hdf5-devel-1.12.1-12.fc39.x86_64.rpm 7.5 MB/s | 1.3 MB     00:00    
(130/389): hdf5-mpich-1.12.1-12.fc39.x86_64.rpm  12 MB/s | 2.1 MB     00:00    
(131/389): highway-1.0.7-1.fc40.x86_64.rpm       88 MB/s | 481 kB     00:00    
(132/389): hwloc-libs-2.9.3-1.fc40.x86_64.rpm   212 MB/s | 2.3 MB     00:00    
(133/389): hdf5-openmpi-1.12.1-12.fc39.x86_64.r  55 MB/s | 2.1 MB     00:00    
(134/389): hdf5-openmpi-devel-1.12.1-12.fc39.x8  38 MB/s | 1.3 MB     00:00    
(135/389): infinipath-psm-3.3-26_g604758e_open.  64 MB/s | 198 kB     00:00    
(136/389): jbig2dec-libs-0.19-10.fc39.x86_64.rp  23 MB/s |  73 kB     00:00    
(137/389): hypre-openmpi-2.24.0-8.fc40.x86_64.r  82 MB/s | 1.7 MB     00:00    
(138/389): jbigkit-libs-2.1-26.fc39.x86_64.rpm   10 MB/s |  53 kB     00:00    
(139/389): jsoncpp-1.9.5-5.fc39.x86_64.rpm       30 MB/s |  99 kB     00:00    
(140/389): kbd-2.6.3-1.fc40.x86_64.rpm           94 MB/s | 432 kB     00:00    
(141/389): kbd-legacy-2.6.3-1.fc40.noarch.rpm   160 MB/s | 574 kB     00:00    
(142/389): kmod-30-6.fc39.x86_64.rpm             45 MB/s | 120 kB     00:00    
(143/389): hypre-mpich-2.24.0-8.fc40.x86_64.rpm  43 MB/s | 1.7 MB     00:00    
(144/389): kmod-libs-30-6.fc39.x86_64.rpm        23 MB/s |  67 kB     00:00    
(145/389): lasi-1.1.3-11.fc39.x86_64.rpm         14 MB/s |  54 kB     00:00    
(146/389): lcms2-2.15-2.fc39.x86_64.rpm          35 MB/s | 177 kB     00:00    
(147/389): less-643-1.fc40.x86_64.rpm            48 MB/s | 176 kB     00:00    
(148/389): libICE-1.1.1-1.fc40.x86_64.rpm        22 MB/s |  74 kB     00:00    
(149/389): libSM-1.2.4-1.fc40.x86_64.rpm         12 MB/s |  43 kB     00:00    
(150/389): libX11-1.8.7-1.fc40.x86_64.rpm       104 MB/s | 647 kB     00:00    
(151/389): libX11-common-1.8.7-1.fc40.noarch.rp  26 MB/s | 176 kB     00:00    
(152/389): kbd-misc-2.6.3-1.fc40.noarch.rpm      55 MB/s | 1.6 MB     00:00    
(153/389): libXau-1.0.11-4.fc40.x86_64.rpm      5.7 MB/s |  31 kB     00:00    
(154/389): libXext-1.3.5-4.fc40.x86_64.rpm       12 MB/s |  39 kB     00:00    
(155/389): libXpm-3.5.17-1.fc40.x86_64.rpm       23 MB/s |  65 kB     00:00    
(156/389): libXft-2.3.8-4.fc40.x86_64.rpm        18 MB/s |  72 kB     00:00    
(157/389): libXrender-0.9.11-4.fc40.x86_64.rpm  6.7 MB/s |  27 kB     00:00    
(158/389): libXt-1.3.0-1.fc40.x86_64.rpm         45 MB/s | 179 kB     00:00    
(159/389): libaec-1.0.6-5.fc39.x86_64.rpm       8.3 MB/s |  42 kB     00:00    
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(217/389): nss-softokn-3.94.0-1.fc40.x86_64.rpm  27 MB/s | 413 kB     00:00    
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(226/389): opensm-libs-3.3.24-6.fc39.x86_64.rpm  12 MB/s |  73 kB     00:00    
[MIRROR] openssh-9.3p1-11.fc40.x86_64.rpm: Status code: 404 for https://d2lzkl7pfhq30w.cloudfront.net/pub/fedora/linux/development/rawhide/Everything/x86_64/os/Packages/o/openssh-9.3p1-11.fc40.x86_64.rpm (IP: 99.86.227.15)
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(228/389): openblas-openmp-0.3.21-6.fc39.x86_64  56 MB/s | 4.9 MB     00:00    
(229/389): orangefs-2.9.8-9.fc39.x86_64.rpm     177 MB/s | 1.8 MB     00:00    
(230/389): openssh-clients-9.3p1-11.fc40.x86_64  36 MB/s | 734 kB     00:00    
(231/389): perl-AutoLoader-5.74-502.fc40.noarch 9.0 MB/s |  21 kB     00:00    
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(283/389): perl-mro-1.28-502.fc40.x86_64.rpm    4.8 MB/s |  29 kB     00:00    
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(291/389): openssh-9.3p1-11.fc40.x86_64.rpm     1.5 MB/s | 438 kB     00:00    
(292/389): pixman-0.42.2-2.fc39.x86_64.rpm       31 MB/s | 288 kB     00:00    
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(299/389): ptscotch-mpich-devel-7.0.4-1.fc40.x8 4.3 MB/s |  48 kB     00:00    
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(303/389): python3-appdirs-1.4.4-11.fc39.noarch 7.6 MB/s |  23 kB     00:00    
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(313/389): python3-cycler-0.11.0-9.fc39.noarch. 9.0 MB/s |  21 kB     00:00    
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(324/389): python3-matplotlib-data-fonts-3.8.0-  89 MB/s | 2.3 MB     00:00    
(325/389): python3-msgpack-1.0.6-1.fc40.x86_64.  31 MB/s | 122 kB     00:00    
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(328/389): python3-netcdf4-1.6.4-3.fc39.x86_64.  53 MB/s | 620 kB     00:00    
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(330/389): python3-numpy-f2py-1.26.0-1.fc40.x86 114 MB/s | 509 kB     00:00    
(331/389): python3-numexpr-2.8.5-2.fc40.x86_64. 9.8 MB/s | 165 kB     00:00    
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(333/389): python3-pillow-10.0.1-1.fc40.x86_64. 165 MB/s | 914 kB     00:00    
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(335/389): python3-pooch-1.5.2-12.fc39.noarch.r  35 MB/s | 126 kB     00:00    
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(337/389): python3-scipy-1.11.1-1.fc39.x86_64.r 265 MB/s |  16 MB     00:00    
(338/389): python3-numpy-1.26.0-1.fc40.x86_64.r  52 MB/s | 7.5 MB     00:00    
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(340/389): python3-tables-3.8.0-6.fc40.x86_64.r  21 MB/s | 1.6 MB     00:00    
(341/389): rav1e-libs-0.6.6-3.fc40.x86_64.rpm   102 MB/s | 1.0 MB     00:00    
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(343/389): rpm-mpi-hooks-8-6.fc39.noarch.rpm    3.5 MB/s |  11 kB     00:00    
(344/389): rsvg-pixbuf-loader-2.57.0-3.fc40.x86 8.3 MB/s |  16 kB     00:00    
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(348/389): snappy-1.1.10-2.fc39.x86_64.rpm       15 MB/s |  37 kB     00:00    
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(362/389): superlu_dist-openmpi-devel-8.1.2-6.f 2.0 MB/s | 118 kB     00:00    
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(367/389): sundials-mpich-devel-6.5.1-5.fc40.x8 6.4 MB/s | 931 kB     00:00    
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(369/389): tcsh-6.24.10-2.fc39.x86_64.rpm       105 MB/s | 463 kB     00:00    
(370/389): ucx-1.14.1-4.fc39.x86_64.rpm          97 MB/s | 781 kB     00:00    
(371/389): urw-base35-bookman-fonts-20200910-18  84 MB/s | 847 kB     00:00    
(372/389): urw-base35-c059-fonts-20200910-18.fc 132 MB/s | 874 kB     00:00    
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(376/389): urw-base35-fonts-common-20200910-18. 8.7 MB/s |  21 kB     00:00    
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(378/389): urw-base35-nimbus-roman-fonts-202009  90 MB/s | 856 kB     00:00    
(379/389): urw-base35-gothic-fonts-20200910-18.  47 MB/s | 643 kB     00:00    
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(381/389): urw-base35-p052-fonts-20200910-18.fc  96 MB/s | 974 kB     00:00    
(382/389): urw-base35-standard-symbols-ps-fonts 4.8 MB/s |  42 kB     00:00    
(383/389): urw-base35-z003-fonts-20200910-18.fc  78 MB/s | 276 kB     00:00    
(384/389): vim-filesystem-9.0.1984-2.fc40.noarc 3.1 MB/s |  18 kB     00:00    
(385/389): xapian-core-libs-1.4.23-1.fc39.x86_6 102 MB/s | 771 kB     00:00    
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(388/389): zlib-ng-2.1.3-2.fc39.x86_64.rpm      6.2 MB/s |  84 kB     00:00    
(389/389): yaksa-0.2-3.fc37.x86_64.rpm          114 MB/s | 6.5 MB     00:00    
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Total                                           138 MB/s | 347 MB     00:02     
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  Installing       : libijs-0.35-19.fc39.x86_64                         184/389 
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  Installing       : opensm-libs-3.3.24-6.fc39.x86_64                   186/389 
  Installing       : libdav1d-1.2.1-2.fc39.x86_64                       187/389 
  Installing       : libdatrie-0.2.13-7.fc39.x86_64                     188/389 
  Installing       : libthai-0.1.29-6.fc39.x86_64                       189/389 
  Installing       : libcurl-devel-8.4.0-1.fc40.x86_64                  190/389 
  Installing       : libcbor-0.10.2-2.fc39.x86_64                       191/389 
  Installing       : libfido2-1.13.0-3.fc39.x86_64                      192/389 
  Installing       : openssh-clients-9.3p1-11.fc40.x86_64               193/389 
  Running scriptlet: openssh-clients-9.3p1-11.fc40.x86_64               193/389 
  Installing       : libb2-0.98.1-9.fc39.x86_64                         194/389 
  Installing       : libargon2-20190702-3.fc39.x86_64                   195/389 
  Installing       : libXau-1.0.11-4.fc40.x86_64                        196/389 
  Installing       : libxcb-1.16-2.fc40.x86_64                          197/389 
  Installing       : libX11-common-1.8.7-1.fc40.noarch                  198/389 
  Installing       : libX11-1.8.7-1.fc40.x86_64                         199/389 
  Installing       : libXrender-0.9.11-4.fc40.x86_64                    200/389 
  Installing       : libXext-1.3.5-4.fc40.x86_64                        201/389 
  Installing       : libXpm-3.5.17-1.fc40.x86_64                        202/389 
  Installing       : libXt-1.3.0-1.fc40.x86_64                          203/389 
  Installing       : kmod-30-6.fc39.x86_64                              204/389 
  Installing       : kernel-headers-6.6.0-0.rc5.git0.1.fc40.x86_64      205/389 
  Installing       : kbd-misc-2.6.3-1.fc40.noarch                       206/389 
  Installing       : kbd-legacy-2.6.3-1.fc40.noarch                     207/389 
  Installing       : kbd-2.6.3-1.fc40.x86_64                            208/389 
  Installing       : jsoncpp-1.9.5-5.fc39.x86_64                        209/389 
  Installing       : json-c-0.17-1.fc40.x86_64                          210/389 
  Installing       : jbigkit-libs-2.1-26.fc39.x86_64                    211/389 
  Installing       : libtiff-4.5.0-3.fc40.x86_64                        212/389 
  Installing       : jbig2dec-libs-0.19-10.fc39.x86_64                  213/389 
  Installing       : highway-1.0.7-1.fc40.x86_64                        214/389 
  Installing       : libjxl-1:0.8.2-3.fc40.x86_64                       215/389 
  Installing       : libaom-3.7.0-1.fc40.x86_64                         216/389 
  Installing       : libavif-0.11.1-11.fc39.x86_64                      217/389 
  Installing       : graphite2-1.3.14-12.fc39.x86_64                    218/389 
  Installing       : google-noto-fonts-common-20230801-3.fc40.noarch    219/389 
  Installing       : google-noto-sans-vf-fonts-20230801-3.fc40.noarch   220/389 
  Installing       : default-fonts-core-sans-4.0-9.fc40.noarch          221/389 
  Installing       : cairo-1.18.0-1.fc40.x86_64                         222/389 
  Installing       : harfbuzz-8.2.1-2.fc40.x86_64                       223/389 
  Installing       : freetype-2.13.1-2.fc39.x86_64                      224/389 
  Installing       : fontconfig-2.14.2-5.fc40.x86_64                    225/389 
  Running scriptlet: fontconfig-2.14.2-5.fc40.x86_64                    225/389 
  Installing       : libXft-2.3.8-4.fc40.x86_64                         226/389 
  Installing       : pango-1.51.0-1.fc40.x86_64                         227/389 
  Installing       : cairo-gobject-1.18.0-1.fc40.x86_64                 228/389 
  Installing       : librsvg2-2.57.0-3.fc40.x86_64                      229/389 
  Installing       : rsvg-pixbuf-loader-2.57.0-3.fc40.x86_64            230/389 
  Installing       : lasi-1.1.3-11.fc39.x86_64                          231/389 
  Running scriptlet: tk-1:8.6.13-1.fc40.x86_64                          232/389 
  Installing       : tk-1:8.6.13-1.fc40.x86_64                          232/389 
  Installing       : python3-3.12.0-2.fc40.x86_64                       233/389 
  Installing       : python3-tkinter-3.12.0-2.fc40.x86_64               234/389 
  Installing       : python3-libs-3.12.0-2.fc40.x86_64                  235/389 
  Installing       : python3-numpy-1:1.26.0-1.fc40.x86_64               236/389 
  Installing       : mpich-4.1.2-7.fc40.x86_64                          237/389 
  Installing       : ptscotch-mpich-7.0.4-1.fc40.x86_64                 238/389 
  Installing       : ptscotch-mpich-devel-7.0.4-1.fc40.x86_64           239/389 
  Installing       : python3-packaging-23.2-2.fc40.noarch               240/389 
  Installing       : python3-cython-3.0.2-1.fc40.x86_64                 241/389 
  Installing       : python3-six-1.16.0-12.fc39.noarch                  242/389 
  Installing       : hdf5-mpich-1.12.1-12.fc39.x86_64                   243/389 
  Installing       : scalapack-mpich-2.2.0-6.fc40.x86_64                244/389 
  Installing       : python3-numexpr-2.8.5-2.fc40.x86_64                245/389 
  Installing       : cmake-rpm-macros-3.27.7-1.fc40.noarch              246/389 
  Installing       : python3-appdirs-1.4.4-11.fc39.noarch               247/389 
  Installing       : python3-cpuinfo-9.0.0-5.fc39.noarch                248/389 
  Installing       : python3-idna-3.4-5.fc40.noarch                     249/389 
  Installing       : python3-urllib3-1.26.17-2.fc40.noarch              250/389 
  Installing       : MUMPS-mpich-5.5.1-6.fc40.x86_64                    251/389 
  Installing       : python3-dateutil-1:2.8.2-10.fc39.noarch            252/389 
  Installing       : python3-rpm-generators-14-8.fc40.noarch            253/389 
  Installing       : python3-devel-3.12.0-2.fc40.x86_64                 254/389 
  Installing       : python3-numpy-f2py-1:1.26.0-1.fc40.x86_64          255/389 
  Installing       : ptscotch-mpich-devel-parmetis-7.0.4-1.fc40.x86_6   256/389 
  Installing       : python3-cftime-1.6.2-1.fc39.x86_64                 257/389 
  Installing       : python3-contourpy-1.1.1-1.fc40.x86_64              258/389 
  Installing       : python3-ndindex-1.7-9.fc39.x86_64                  259/389 
  Installing       : python3-babel-2.12.1-6.fc40.noarch                 260/389 
  Installing       : crypto-policies-scripts-20230920-1.git570ea89.fc   261/389 
  Installing       : nss-sysinit-3.94.0-1.fc40.x86_64                   262/389 
  Installing       : nss-3.94.0-1.fc40.x86_64                           263/389 
  Running scriptlet: nss-3.94.0-1.fc40.x86_64                           263/389 
  Installing       : poppler-23.08.0-1.fc39.x86_64                      264/389 
  Installing       : poppler-glib-23.08.0-1.fc39.x86_64                 265/389 
  Installing       : python3-brotli-1.1.0-1.fc40.x86_64                 266/389 
  Installing       : python3-cairo-1.25.0-1.fc40.x86_64                 267/389 
  Installing       : python3-certifi-2023.05.07-2.fc39.noarch           268/389 
  Installing       : python3-netcdf4-1.6.4-3.fc39.x86_64                269/389 
  Installing       : python3-charset-normalizer-3.3.0-1.fc40.noarch     270/389 
  Installing       : python3-requests-2.31.0-1.fc40.noarch              271/389 
  Installing       : python3-pooch-1.5.2-12.fc39.noarch                 272/389 
  Installing       : python3-scipy-1.11.1-1.fc39.x86_64                 273/389 
  Installing       : python3-cycler-0.11.0-9.fc39.noarch                274/389 
  Installing       : python3-docutils-0.20.1-1.fc40.noarch              275/389 
  Installing       : python3-imagesize-1.4.1-5.fc40.noarch              276/389 
  Installing       : python3-kiwisolver-1.4.5-1.fc40.x86_64             277/389 
  Installing       : python3-lxml-4.9.3-2.fc39.x86_64                   278/389 
  Installing       : python3-markupsafe-2.1.3-2.fc39.x86_64             279/389 
  Installing       : python3-jinja2-3.1.2-6.fc40.noarch                 280/389 
  Installing       : python3-msgpack-1.0.6-1.fc40.x86_64                281/389 
  Installing       : python3-blosc2-2.2.5-3.fc39.x86_64                 282/389 
  Installing       : python3-natsort-7.1.1-10.fc39.noarch               283/389 
  Installing       : python3-olefile-0.46-21.fc39.noarch                284/389 
  Installing       : python3-pygments-2.16.1-1.fc40.noarch              285/389 
  Installing       : python3-pyparsing-3.0.9-11.fc39.noarch             286/389 
  Installing       : python3-setuptools-68.2.2-1.fc40.noarch            287/389 
  Installing       : python3-fs-2.4.16-5.fc39.noarch                    288/389 
  Installing       : python3-fonttools-4.43.1-1.fc40.x86_64             289/389 
  Installing       : python3-snowballstemmer-2.2.0-7.fc39.noarch        290/389 
  Installing       : python3-sphinx-theme-alabaster-0.7.12-19.fc39.no   291/389 
  Installing       : python3-sphinxcontrib-devhelp-1.0.2-14.fc39.noar   292/389 
  Installing       : python3-sphinxcontrib-jsmath-1.0.1-22.fc39.noarc   293/389 
  Installing       : python3-sphinxcontrib-qthelp-1.0.3-15.fc39.noarc   294/389 
  Installing       : python3-sphinxcontrib-serializinghtml-1.1.5-10.f   295/389 
  Installing       : gd-2.3.3-12.fc39.x86_64                            296/389 
  Installing       : libraqm-0.8.0-5.fc39.x86_64                        297/389 
  Installing       : python3-pillow-10.0.1-1.fc40.x86_64                298/389 
  Installing       : python3-pillow-tk-10.0.1-1.fc40.x86_64             299/389 
  Installing       : python3-matplotlib-tk-3.8.0-1.fc40.x86_64          300/389 
  Installing       : python3-matplotlib-3.8.0-1.fc40.x86_64             301/389 
  Installing       : python3-boututils-0.1.10-4.fc39.noarch             302/389 
  Installing       : python3-mpmath-1.3.0-3.fc39.noarch                 303/389 
  Installing       : python3-sympy-1.12-2.fc39.x86_64                   304/389 
  Installing       : google-droid-sans-fonts-20200215-17.fc40.noarch    305/389 
  Installing       : glibc-headers-x86-2.38.9000-12.fc40.noarch         306/389 
  Installing       : libxcrypt-devel-4.4.36-2.fc39.x86_64               307/389 
  Installing       : glibc-devel-2.38.9000-12.fc40.x86_64               308/389 
  Installing       : gettext-envsubst-0.22-2.fc39.x86_64                309/389 
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  Installing       : gettext-0.22-2.fc39.x86_64                         311/389 
  Installing       : gettext-common-devel-0.22-2.fc39.noarch            312/389 
  Installing       : gc-8.2.2-4.fc39.x86_64                             313/389 
  Installing       : guile22-2.2.7-9.fc39.x86_64                        314/389 
  Installing       : make-1:4.4.1-2.fc39.x86_64                         315/389 
  Installing       : gcc-13.2.1-4.fc40.x86_64                           316/389 
  Running scriptlet: gcc-13.2.1-4.fc40.x86_64                           316/389 
  Installing       : libquadmath-devel-13.2.1-4.fc40.x86_64             317/389 
  Installing       : gcc-gfortran-13.2.1-4.fc40.x86_64                  318/389 
  Installing       : mpich-devel-4.1.2-7.fc40.x86_64                    319/389 
  Installing       : hdf5-mpich-devel-1.12.1-12.fc39.x86_64             320/389 
  Installing       : superlu_dist-mpich-1:8.1.2-6.fc40.x86_64           321/389 
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  Installing       : hypre-mpich-2.24.0-8.fc40.x86_64                   323/389 
  Installing       : petsc-mpich-3.19.6-1.fc40.x86_64                   324/389 
  Installing       : hdf5-devel-1.12.1-12.fc39.x86_64                   325/389 
  Installing       : netcdf-devel-4.9.0-5.fc38.x86_64                   326/389 
  Installing       : fmt-10.0.0-3.fc39.x86_64                           327/389 
  Installing       : emacs-filesystem-1:29.1-2.fc40.noarch              328/389 
  Installing       : cmake-3.27.7-1.fc40.x86_64                         329/389 
  Installing       : cmake-data-3.27.7-1.fc40.noarch                    330/389 
  Installing       : dbus-libs-1:1.14.10-1.fc40.x86_64                  331/389 
  Installing       : avahi-libs-0.8-24.fc39.x86_64                      332/389 
  Installing       : cups-libs-1:2.4.7-1.fc40.x86_64                    333/389 
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  Running scriptlet: dbus-broker-33-2.fc39.x86_64                       335/389 
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  Installing       : device-mapper-libs-1.02.196-1.fc39.x86_64          337/389 
  Installing       : cryptsetup-libs-2.6.1-3.fc39.x86_64                338/389 
  Installing       : device-mapper-1.02.196-1.fc39.x86_64               339/389 
  Installing       : systemd-pam-254.5-2.fc40.x86_64                    340/389 
  Installing       : systemd-254.5-2.fc40.x86_64                        341/389 
  Running scriptlet: systemd-254.5-2.fc40.x86_64                        341/389 
Creating group 'input' with GID 104.
Creating group 'kvm' with GID 36.
Creating group 'render' with GID 105.
Creating group 'sgx' with GID 106.
Creating group 'systemd-journal' with GID 190.
Creating group 'systemd-oom' with GID 999.
Creating user 'systemd-oom' (systemd Userspace OOM Killer) with UID 999 and GID 999.

  Installing       : systemd-udev-254.5-2.fc40.x86_64                   342/389 
  Running scriptlet: systemd-udev-254.5-2.fc40.x86_64                   342/389 
Created symlink /etc/systemd/system/dbus-org.freedesktop.home1.service → /usr/lib/systemd/system/systemd-homed.service.
Created symlink /etc/systemd/system/multi-user.target.wants/systemd-homed.service → /usr/lib/systemd/system/systemd-homed.service.
Created symlink /etc/systemd/system/systemd-homed.service.wants/systemd-homed-activate.service → /usr/lib/systemd/system/systemd-homed-activate.service.
Created symlink /etc/systemd/system/sysinit.target.wants/systemd-pstore.service → /usr/lib/systemd/system/systemd-pstore.service.
Created symlink /etc/systemd/system/multi-user.target.wants/remote-cryptsetup.target → /usr/lib/systemd/system/remote-cryptsetup.target.

  Installing       : infinipath-psm-3.3-26_g604758e_open.6.fc37.6.x86   343/389 
  Installing       : openmpi-4.1.5-7.fc40.x86_64                        344/389 
  Installing       : ptscotch-openmpi-7.0.4-1.fc40.x86_64               345/389 
  Installing       : ptscotch-openmpi-devel-7.0.4-1.fc40.x86_64         346/389 
  Installing       : openmpi-devel-4.1.5-7.fc40.x86_64                  347/389 
  Installing       : hdf5-openmpi-1.12.1-12.fc39.x86_64                 348/389 
  Installing       : scalapack-openmpi-2.2.0-6.fc40.x86_64              349/389 
  Installing       : MUMPS-openmpi-5.5.1-6.fc40.x86_64                  350/389 
  Installing       : hdf5-openmpi-devel-1.12.1-12.fc39.x86_64           351/389 
  Installing       : superlu_dist-openmpi-1:8.1.2-6.fc40.x86_64         352/389 
  Installing       : superlu_dist-openmpi-devel-1:8.1.2-6.fc40.x86_64   353/389 
  Installing       : hypre-openmpi-2.24.0-8.fc40.x86_64                 354/389 
  Installing       : petsc-openmpi-3.19.6-1.fc40.x86_64                 355/389 
  Installing       : clang-resource-filesystem-17.0.2-1.fc40.noarch     356/389 
  Installing       : clang-libs-17.0.2-1.fc40.x86_64                    357/389 
  Installing       : annobin-docs-12.28-1.fc40.noarch                   358/389 
  Installing       : adobe-mappings-pdf-20190401-5.fc39.noarch          359/389 
  Installing       : libgs-10.01.2-3.fc39.x86_64                        360/389 
  Installing       : graphviz-9.0.0-2.fc40.x86_64                       361/389 
  Running scriptlet: graphviz-9.0.0-2.fc40.x86_64                       361/389 
  Installing       : python3-sphinxcontrib-applehelp-1.0.6-1.fc40.noa   362/389 
  Installing       : python3-sphinxcontrib-htmlhelp-2.0.3-1.fc40.noar   363/389 
  Installing       : python3-sphinx-1:7.1.2-2.fc40.noarch               364/389 
  Installing       : SuperLUMT-common-3.1.0-36.fc39.noarch              365/389 
  Installing       : SuperLUMT64-double-3.1.0-36.fc39.x86_64            366/389 
  Installing       : sundials-6.5.1-5.fc40.x86_64                       367/389 
  Installing       : sundials-mpich-6.5.1-5.fc40.x86_64                 368/389 
  Installing       : sundials-openmpi-6.5.1-5.fc40.x86_64               369/389 
  Installing       : sundials-openmpi-devel-6.5.1-5.fc40.x86_64         370/389 
  Installing       : sundials-mpich-devel-6.5.1-5.fc40.x86_64           371/389 
  Installing       : sundials-devel-6.5.1-5.fc40.x86_64                 372/389 
  Installing       : doxygen-2:1.9.8-1.fc40.x86_64                      373/389 
  Installing       : annobin-plugin-gcc-12.28-1.fc40.x86_64             374/389 
  Running scriptlet: annobin-plugin-gcc-12.28-1.fc40.x86_64             374/389 
  Installing       : petsc-openmpi-devel-3.19.6-1.fc40.x86_64           375/389 
  Installing       : fmt-devel-10.0.0-3.fc39.x86_64                     376/389 
  Installing       : netcdf-cxx4-devel-4.3.1-9.fc39.x86_64              377/389 
  Installing       : petsc-mpich-devel-3.19.6-1.fc40.x86_64             378/389 
  Installing       : gcc-c++-13.2.1-4.fc40.x86_64                       379/389 
  Installing       : gcc-plugin-annobin-13.2.1-4.fc40.x86_64            380/389 
  Running scriptlet: gcc-plugin-annobin-13.2.1-4.fc40.x86_64            380/389 
  Installing       : gettext-devel-0.22-2.fc39.x86_64                   381/389 
  Installing       : python3-boutdata-0.1.10-4.fc39.noarch              382/389 
  Installing       : python3-tables-3.8.0-6.fc40.x86_64                 383/389 
  Installing       : flexiblas-devel-3.3.1-5.fc39.x86_64                384/389 
  Installing       : fftw-devel-3.3.10-7.fc39.x86_64                    385/389 
  Installing       : mpark-variant-devel-1.4.0-10.fc39.x86_64           386/389 
  Installing       : systemd-rpm-macros-254.5-2.fc40.noarch             387/389 
  Installing       : m4-1.4.19-7.fc40.x86_64                            388/389 
  Installing       : chrpath-0.16-21.fc39.x86_64                        389/389 
  Running scriptlet: urw-base35-bookman-fonts-20200910-18.fc39.noarch   389/389 
  Running scriptlet: urw-base35-c059-fonts-20200910-18.fc39.noarch      389/389 
  Running scriptlet: urw-base35-d050000l-fonts-20200910-18.fc39.noarc   389/389 
  Running scriptlet: urw-base35-gothic-fonts-20200910-18.fc39.noarch    389/389 
  Running scriptlet: urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39   389/389 
  Running scriptlet: urw-base35-nimbus-roman-fonts-20200910-18.fc39.n   389/389 
  Running scriptlet: urw-base35-nimbus-sans-fonts-20200910-18.fc39.no   389/389 
  Running scriptlet: urw-base35-p052-fonts-20200910-18.fc39.noarch      389/389 
  Running scriptlet: urw-base35-standard-symbols-ps-fonts-20200910-18   389/389 
  Running scriptlet: urw-base35-z003-fonts-20200910-18.fc39.noarch      389/389 
  Running scriptlet: fontconfig-2.14.2-5.fc40.x86_64                    389/389 
  Running scriptlet: crypto-policies-scripts-20230920-1.git570ea89.fc   389/389 
  Running scriptlet: nss-3.94.0-1.fc40.x86_64                           389/389 
  Running scriptlet: chrpath-0.16-21.fc39.x86_64                        389/389 
Creating group 'systemd-coredump' with GID 998.
Creating user 'systemd-coredump' (systemd Core Dumper) with UID 998 and GID 998.
Creating group 'systemd-timesync' with GID 997.
Creating user 'systemd-timesync' (systemd Time Synchronization) with UID 997 and GID 997.

  Verifying        : python3-babel-2.12.1-6.fc40.noarch                   1/389 
  Verifying        : python3-requests-2.31.0-1.fc40.noarch                2/389 
  Verifying        : MUMPS-common-5.5.1-6.fc40.noarch                     3/389 
  Verifying        : MUMPS-mpich-5.5.1-6.fc40.x86_64                      4/389 
  Verifying        : MUMPS-openmpi-5.5.1-6.fc40.x86_64                    5/389 
  Verifying        : SuperLUMT-common-3.1.0-36.fc39.noarch                6/389 
  Verifying        : SuperLUMT64-double-3.1.0-36.fc39.x86_64              7/389 
  Verifying        : abattis-cantarell-vf-fonts-0.301-10.fc39.noarch      8/389 
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  Verifying        : ptscotch-openmpi-devel-7.0.4-1.fc40.x86_64         274/389 
  Verifying        : pyproject-rpm-macros-1.10.0-1.fc40.noarch          275/389 
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  Verifying        : python3-3.12.0-2.fc40.x86_64                       278/389 
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  Verifying        : python3-brotli-1.1.0-1.fc40.x86_64                 283/389 
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  Verifying        : python3-contourpy-1.1.1-1.fc40.x86_64              288/389 
  Verifying        : python3-cpuinfo-9.0.0-5.fc39.noarch                289/389 
  Verifying        : python3-cycler-0.11.0-9.fc39.noarch                290/389 
  Verifying        : python3-cython-3.0.2-1.fc40.x86_64                 291/389 
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  Verifying        : python3-docutils-0.20.1-1.fc40.noarch              294/389 
  Verifying        : python3-fonttools-4.43.1-1.fc40.x86_64             295/389 
  Verifying        : python3-fs-2.4.16-5.fc39.noarch                    296/389 
  Verifying        : python3-idna-3.4-5.fc40.noarch                     297/389 
  Verifying        : python3-imagesize-1.4.1-5.fc40.noarch              298/389 
  Verifying        : python3-jinja2-3.1.2-6.fc40.noarch                 299/389 
  Verifying        : python3-kiwisolver-1.4.5-1.fc40.x86_64             300/389 
  Verifying        : python3-libs-3.12.0-2.fc40.x86_64                  301/389 
  Verifying        : python3-lxml-4.9.3-2.fc39.x86_64                   302/389 
  Verifying        : python3-markupsafe-2.1.3-2.fc39.x86_64             303/389 
  Verifying        : python3-matplotlib-3.8.0-1.fc40.x86_64             304/389 
  Verifying        : python3-matplotlib-data-3.8.0-1.fc40.noarch        305/389 
  Verifying        : python3-matplotlib-data-fonts-3.8.0-1.fc40.noarc   306/389 
  Verifying        : python3-matplotlib-tk-3.8.0-1.fc40.x86_64          307/389 
  Verifying        : python3-mpmath-1.3.0-3.fc39.noarch                 308/389 
  Verifying        : python3-msgpack-1.0.6-1.fc40.x86_64                309/389 
  Verifying        : python3-natsort-7.1.1-10.fc39.noarch               310/389 
  Verifying        : python3-ndindex-1.7-9.fc39.x86_64                  311/389 
  Verifying        : python3-netcdf4-1.6.4-3.fc39.x86_64                312/389 
  Verifying        : python3-numexpr-2.8.5-2.fc40.x86_64                313/389 
  Verifying        : python3-numpy-1:1.26.0-1.fc40.x86_64               314/389 
  Verifying        : python3-numpy-f2py-1:1.26.0-1.fc40.x86_64          315/389 
  Verifying        : python3-olefile-0.46-21.fc39.noarch                316/389 
  Verifying        : python3-packaging-23.2-2.fc40.noarch               317/389 
  Verifying        : python3-pillow-10.0.1-1.fc40.x86_64                318/389 
  Verifying        : python3-pillow-tk-10.0.1-1.fc40.x86_64             319/389 
  Verifying        : python3-pooch-1.5.2-12.fc39.noarch                 320/389 
  Verifying        : python3-pygments-2.16.1-1.fc40.noarch              321/389 
  Verifying        : python3-pyparsing-3.0.9-11.fc39.noarch             322/389 
  Verifying        : python3-rpm-generators-14-8.fc40.noarch            323/389 
  Verifying        : python3-rpm-macros-3.12-4.fc40.noarch              324/389 
  Verifying        : python3-scipy-1.11.1-1.fc39.x86_64                 325/389 
  Verifying        : python3-setuptools-68.2.2-1.fc40.noarch            326/389 
  Verifying        : python3-six-1.16.0-12.fc39.noarch                  327/389 
  Verifying        : python3-snowballstemmer-2.2.0-7.fc39.noarch        328/389 
  Verifying        : python3-sphinx-1:7.1.2-2.fc40.noarch               329/389 
  Verifying        : python3-sphinx-theme-alabaster-0.7.12-19.fc39.no   330/389 
  Verifying        : python3-sphinxcontrib-applehelp-1.0.6-1.fc40.noa   331/389 
  Verifying        : python3-sphinxcontrib-devhelp-1.0.2-14.fc39.noar   332/389 
  Verifying        : python3-sphinxcontrib-htmlhelp-2.0.3-1.fc40.noar   333/389 
  Verifying        : python3-sphinxcontrib-jsmath-1.0.1-22.fc39.noarc   334/389 
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  Verifying        : python3-sphinxcontrib-serializinghtml-1.1.5-10.f   336/389 
  Verifying        : python3-sympy-1.12-2.fc39.x86_64                   337/389 
  Verifying        : python3-tables-3.8.0-6.fc40.x86_64                 338/389 
  Verifying        : python3-tkinter-3.12.0-2.fc40.x86_64               339/389 
  Verifying        : python3-urllib3-1.26.17-2.fc40.noarch              340/389 
  Verifying        : rav1e-libs-0.6.6-3.fc40.x86_64                     341/389 
  Verifying        : rhash-1.4.3-3.fc39.x86_64                          342/389 
  Verifying        : rpm-mpi-hooks-8-6.fc39.noarch                      343/389 
  Verifying        : rsvg-pixbuf-loader-2.57.0-3.fc40.x86_64            344/389 
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  Verifying        : shared-mime-info-2.3-1.fc40.x86_64                 348/389 
  Verifying        : snappy-1.1.10-2.fc39.x86_64                        349/389 
  Verifying        : suitesparse-5.13.0-4.fc40.x86_64                   350/389 
  Verifying        : suitesparse64-5.13.0-4.fc40.x86_64                 351/389 
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  Verifying        : sundials-mpich-devel-6.5.1-5.fc40.x86_64           355/389 
  Verifying        : sundials-openmpi-6.5.1-5.fc40.x86_64               356/389 
  Verifying        : sundials-openmpi-devel-6.5.1-5.fc40.x86_64         357/389 
  Verifying        : superlu_dist-mpich-1:8.1.2-6.fc40.x86_64           358/389 
  Verifying        : superlu_dist-mpich-devel-1:8.1.2-6.fc40.x86_64     359/389 
  Verifying        : superlu_dist-openmpi-1:8.1.2-6.fc40.x86_64         360/389 
  Verifying        : superlu_dist-openmpi-devel-1:8.1.2-6.fc40.x86_64   361/389 
  Verifying        : svt-av1-libs-1.4.1-3.fc39.x86_64                   362/389 
  Verifying        : systemd-254.5-2.fc40.x86_64                        363/389 
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  Verifying        : systemd-udev-254.5-2.fc40.x86_64                   366/389 
  Verifying        : tcl-1:8.6.13-1.fc40.x86_64                         367/389 
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  Verifying        : tzdata-2023c-4.fc40.noarch                         370/389 
  Verifying        : ucx-1.14.1-4.fc39.x86_64                           371/389 
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  Verifying        : urw-base35-c059-fonts-20200910-18.fc39.noarch      373/389 
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  Verifying        : urw-base35-gothic-fonts-20200910-18.fc39.noarch    377/389 
  Verifying        : urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39   378/389 
  Verifying        : urw-base35-nimbus-roman-fonts-20200910-18.fc39.n   379/389 
  Verifying        : urw-base35-nimbus-sans-fonts-20200910-18.fc39.no   380/389 
  Verifying        : urw-base35-p052-fonts-20200910-18.fc39.noarch      381/389 
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  Verifying        : urw-base35-z003-fonts-20200910-18.fc39.noarch      383/389 
  Verifying        : vim-filesystem-2:9.0.1984-2.fc40.noarch            384/389 
  Verifying        : xapian-core-libs-1.4.23-1.fc39.x86_64              385/389 
  Verifying        : xml-common-0.6.3-61.fc39.noarch                    386/389 
  Verifying        : yaksa-0.2-3.fc37.x86_64                            387/389 
  Verifying        : zlib-devel-1.2.13-4.fc39.x86_64                    388/389 
  Verifying        : zlib-ng-2.1.3-2.fc39.x86_64                        389/389 

Installed:
  MUMPS-common-5.5.1-6.fc40.noarch                                              
  MUMPS-mpich-5.5.1-6.fc40.x86_64                                               
  MUMPS-openmpi-5.5.1-6.fc40.x86_64                                             
  SuperLUMT-common-3.1.0-36.fc39.noarch                                         
  SuperLUMT64-double-3.1.0-36.fc39.x86_64                                       
  abattis-cantarell-vf-fonts-0.301-10.fc39.noarch                               
  adobe-mappings-cmap-20230622-1.fc39.noarch                                    
  adobe-mappings-cmap-deprecated-20230622-1.fc39.noarch                         
  adobe-mappings-pdf-20190401-5.fc39.noarch                                     
  annobin-docs-12.28-1.fc40.noarch                                              
  annobin-plugin-gcc-12.28-1.fc40.x86_64                                        
  avahi-libs-0.8-24.fc39.x86_64                                                 
  blosc-1.21.4-2.fc39.x86_64                                                    
  blosc2-2.10.0-2.fc39.x86_64                                                   
  cairo-1.18.0-1.fc40.x86_64                                                    
  cairo-gobject-1.18.0-1.fc40.x86_64                                            
  chrpath-0.16-21.fc39.x86_64                                                   
  clang-libs-17.0.2-1.fc40.x86_64                                               
  clang-resource-filesystem-17.0.2-1.fc40.noarch                                
  cmake-3.27.7-1.fc40.x86_64                                                    
  cmake-data-3.27.7-1.fc40.noarch                                               
  cmake-filesystem-3.27.7-1.fc40.x86_64                                         
  cmake-rpm-macros-3.27.7-1.fc40.noarch                                         
  cpp-13.2.1-4.fc40.x86_64                                                      
  crypto-policies-scripts-20230920-1.git570ea89.fc40.noarch                     
  cryptsetup-libs-2.6.1-3.fc39.x86_64                                           
  cups-libs-1:2.4.7-1.fc40.x86_64                                               
  dbus-1:1.14.10-1.fc40.x86_64                                                  
  dbus-broker-33-2.fc39.x86_64                                                  
  dbus-common-1:1.14.10-1.fc40.noarch                                           
  dbus-libs-1:1.14.10-1.fc40.x86_64                                             
  default-fonts-core-sans-4.0-9.fc40.noarch                                     
  dejavu-sans-fonts-2.37-21.fc40.noarch                                         
  device-mapper-1.02.196-1.fc39.x86_64                                          
  device-mapper-libs-1.02.196-1.fc39.x86_64                                     
  doxygen-2:1.9.8-1.fc40.x86_64                                                 
  emacs-filesystem-1:29.1-2.fc40.noarch                                         
  environment-modules-5.3.1-2.fc39.x86_64                                       
  expat-2.5.0-3.fc39.x86_64                                                     
  fftw-3.3.10-7.fc39.x86_64                                                     
  fftw-devel-3.3.10-7.fc39.x86_64                                               
  fftw-libs-3.3.10-7.fc39.x86_64                                                
  fftw-libs-double-3.3.10-7.fc39.x86_64                                         
  fftw-libs-long-3.3.10-7.fc39.x86_64                                           
  fftw-libs-quad-3.3.10-7.fc39.x86_64                                           
  fftw-libs-single-3.3.10-7.fc39.x86_64                                         
  flexiblas-3.3.1-5.fc39.x86_64                                                 
  flexiblas-devel-3.3.1-5.fc39.x86_64                                           
  flexiblas-netlib-3.3.1-5.fc39.x86_64                                          
  flexiblas-netlib64-3.3.1-5.fc39.x86_64                                        
  flexiblas-openblas-openmp-3.3.1-5.fc39.x86_64                                 
  flexiblas-openblas-openmp64-3.3.1-5.fc39.x86_64                               
  fmt-10.0.0-3.fc39.x86_64                                                      
  fmt-devel-10.0.0-3.fc39.x86_64                                                
  fontconfig-2.14.2-5.fc40.x86_64                                               
  fonts-filesystem-1:2.0.5-12.fc39.noarch                                       
  freetype-2.13.1-2.fc39.x86_64                                                 
  fribidi-1.0.13-2.fc39.x86_64                                                  
  gc-8.2.2-4.fc39.x86_64                                                        
  gcc-13.2.1-4.fc40.x86_64                                                      
  gcc-c++-13.2.1-4.fc40.x86_64                                                  
  gcc-gfortran-13.2.1-4.fc40.x86_64                                             
  gcc-plugin-annobin-13.2.1-4.fc40.x86_64                                       
  gd-2.3.3-12.fc39.x86_64                                                       
  gdk-pixbuf2-2.42.10-5.fc39.x86_64                                             
  gettext-0.22-2.fc39.x86_64                                                    
  gettext-common-devel-0.22-2.fc39.noarch                                       
  gettext-devel-0.22-2.fc39.x86_64                                              
  gettext-envsubst-0.22-2.fc39.x86_64                                           
  gettext-libs-0.22-2.fc39.x86_64                                               
  gettext-runtime-0.22-2.fc39.x86_64                                            
  glib2-2.78.0-3.fc40.x86_64                                                    
  glibc-devel-2.38.9000-12.fc40.x86_64                                          
  glibc-headers-x86-2.38.9000-12.fc40.noarch                                    
  gnutls-3.8.1-1.fc40.x86_64                                                    
  google-droid-sans-fonts-20200215-17.fc40.noarch                               
  google-noto-fonts-common-20230801-3.fc40.noarch                               
  google-noto-sans-vf-fonts-20230801-3.fc40.noarch                              
  graphite2-1.3.14-12.fc39.x86_64                                               
  graphviz-9.0.0-2.fc40.x86_64                                                  
  groff-base-1.23.0-2.fc39.x86_64                                               
  gts-0.7.6-46.20121130.fc39.x86_64                                             
  guile22-2.2.7-9.fc39.x86_64                                                   
  harfbuzz-8.2.1-2.fc40.x86_64                                                  
  hdf-libs-4.2.15-14.fc40.x86_64                                                
  hdf5-1.12.1-12.fc39.x86_64                                                    
  hdf5-devel-1.12.1-12.fc39.x86_64                                              
  hdf5-mpich-1.12.1-12.fc39.x86_64                                              
  hdf5-mpich-devel-1.12.1-12.fc39.x86_64                                        
  hdf5-openmpi-1.12.1-12.fc39.x86_64                                            
  hdf5-openmpi-devel-1.12.1-12.fc39.x86_64                                      
  highway-1.0.7-1.fc40.x86_64                                                   
  hwloc-libs-2.9.3-1.fc40.x86_64                                                
  hypre-mpich-2.24.0-8.fc40.x86_64                                              
  hypre-openmpi-2.24.0-8.fc40.x86_64                                            
  infinipath-psm-3.3-26_g604758e_open.6.fc37.6.x86_64                           
  jbig2dec-libs-0.19-10.fc39.x86_64                                             
  jbigkit-libs-2.1-26.fc39.x86_64                                               
  json-c-0.17-1.fc40.x86_64                                                     
  jsoncpp-1.9.5-5.fc39.x86_64                                                   
  kbd-2.6.3-1.fc40.x86_64                                                       
  kbd-legacy-2.6.3-1.fc40.noarch                                                
  kbd-misc-2.6.3-1.fc40.noarch                                                  
  kernel-headers-6.6.0-0.rc5.git0.1.fc40.x86_64                                 
  kmod-30-6.fc39.x86_64                                                         
  kmod-libs-30-6.fc39.x86_64                                                    
  lasi-1.1.3-11.fc39.x86_64                                                     
  lcms2-2.15-2.fc39.x86_64                                                      
  less-643-1.fc40.x86_64                                                        
  libICE-1.1.1-1.fc40.x86_64                                                    
  libSM-1.2.4-1.fc40.x86_64                                                     
  libX11-1.8.7-1.fc40.x86_64                                                    
  libX11-common-1.8.7-1.fc40.noarch                                             
  libXau-1.0.11-4.fc40.x86_64                                                   
  libXext-1.3.5-4.fc40.x86_64                                                   
  libXft-2.3.8-4.fc40.x86_64                                                    
  libXpm-3.5.17-1.fc40.x86_64                                                   
  libXrender-0.9.11-4.fc40.x86_64                                               
  libXt-1.3.0-1.fc40.x86_64                                                     
  libaec-1.0.6-5.fc39.x86_64                                                    
  libaec-devel-1.0.6-5.fc39.x86_64                                              
  libaom-3.7.0-1.fc40.x86_64                                                    
  libargon2-20190702-3.fc39.x86_64                                              
  libavif-0.11.1-11.fc39.x86_64                                                 
  libb2-0.98.1-9.fc39.x86_64                                                    
  libcbor-0.10.2-2.fc39.x86_64                                                  
  libcurl-devel-8.4.0-1.fc40.x86_64                                             
  libdatrie-0.2.13-7.fc39.x86_64                                                
  libdav1d-1.2.1-2.fc39.x86_64                                                  
  libedit-3.1-48.20230828cvs.fc40.x86_64                                        
  libfabric-1.19.0-1.fc40.x86_64                                                
  libfido2-1.13.0-3.fc39.x86_64                                                 
  libgfortran-13.2.1-4.fc40.x86_64                                              
  libgs-10.01.2-3.fc39.x86_64                                                   
  libibumad-48.0-1.fc40.x86_64                                                  
  libibverbs-48.0-1.fc40.x86_64                                                 
  libijs-0.35-19.fc39.x86_64                                                    
  libimagequant-4.0.1-5.fc39.x86_64                                             
  libjpeg-turbo-2.1.4-3.fc39.x86_64                                             
  libjxl-1:0.8.2-3.fc40.x86_64                                                  
  liblerc-4.0.0-4.fc39.x86_64                                                   
  libmpc-1.3.1-3.fc39.x86_64                                                    
  libnl3-3.8.0-1.fc40.x86_64                                                    
  libpaper-1:2.1.1-1.fc39.x86_64                                                
  libpipeline-1.5.7-3.fc39.x86_64                                               
  libpng-2:1.6.40-1.fc40.x86_64                                                 
  libpsm2-11.2.230-2.fc39.x86_64                                                
  libqhull_r-1:8.0.2-2.fc40.x86_64                                              
  libquadmath-13.2.1-4.fc40.x86_64                                              
  libquadmath-devel-13.2.1-4.fc40.x86_64                                        
  libraqm-0.8.0-5.fc39.x86_64                                                   
  librdmacm-48.0-1.fc40.x86_64                                                  
  librsvg2-2.57.0-3.fc40.x86_64                                                 
  libseccomp-2.5.3-6.fc39.x86_64                                                
  libstdc++-devel-13.2.1-4.fc40.x86_64                                          
  libthai-0.1.29-6.fc39.x86_64                                                  
  libtiff-4.5.0-3.fc40.x86_64                                                   
  libtool-ltdl-2.4.7-8.fc40.x86_64                                              
  libuv-1:1.46.0-4.fc40.x86_64                                                  
  libvmaf-2.3.0-6.fc39.x86_64                                                   
  libwebp-1.3.2-2.fc40.x86_64                                                   
  libxcb-1.16-2.fc40.x86_64                                                     
  libxcrypt-devel-4.4.36-2.fc39.x86_64                                          
  libxslt-1.1.38-3.fc39.x86_64                                                  
  llvm-libs-17.0.2-1.fc40.x86_64                                                
  lzo-2.10-9.fc39.x86_64                                                        
  m4-1.4.19-7.fc40.x86_64                                                       
  make-1:4.4.1-2.fc39.x86_64                                                    
  man-db-2.12.0-3.fc40.x86_64                                                   
  metis-5.1.0.3-2.fc39.x86_64                                                   
  mpark-variant-devel-1.4.0-10.fc39.x86_64                                      
  mpdecimal-2.5.1-7.fc39.x86_64                                                 
  mpich-4.1.2-7.fc40.x86_64                                                     
  mpich-devel-4.1.2-7.fc40.x86_64                                               
  munge-libs-0.5.15-5.fc39.x86_64                                               
  ncurses-6.4-8.20231001.fc40.x86_64                                            
  netcdf-4.9.0-5.fc38.x86_64                                                    
  netcdf-cxx4-4.3.1-9.fc39.x86_64                                               
  netcdf-cxx4-devel-4.3.1-9.fc39.x86_64                                         
  netcdf-devel-4.9.0-5.fc38.x86_64                                              
  netpbm-11.02.00-2.fc39.x86_64                                                 
  nettle-3.9.1-2.fc39.x86_64                                                    
  nspr-4.35.0-14.fc40.x86_64                                                    
  nss-3.94.0-1.fc40.x86_64                                                      
  nss-softokn-3.94.0-1.fc40.x86_64                                              
  nss-softokn-freebl-3.94.0-1.fc40.x86_64                                       
  nss-sysinit-3.94.0-1.fc40.x86_64                                              
  nss-util-3.94.0-1.fc40.x86_64                                                 
  numactl-libs-2.0.16-3.fc39.x86_64                                             
  openblas-0.3.21-6.fc39.x86_64                                                 
  openblas-openmp-0.3.21-6.fc39.x86_64                                          
  openblas-openmp64-0.3.21-6.fc39.x86_64                                        
  openjpeg2-2.5.0-5.fc40.x86_64                                                 
  openmpi-4.1.5-7.fc40.x86_64                                                   
  openmpi-devel-4.1.5-7.fc40.x86_64                                             
  opensm-libs-3.3.24-6.fc39.x86_64                                              
  openssh-9.3p1-11.fc40.x86_64                                                  
  openssh-clients-9.3p1-11.fc40.x86_64                                          
  orangefs-2.9.8-9.fc39.x86_64                                                  
  pango-1.51.0-1.fc40.x86_64                                                    
  perl-AutoLoader-5.74-502.fc40.noarch                                          
  perl-B-1.88-502.fc40.x86_64                                                   
  perl-Carp-1.54-500.fc39.noarch                                                
  perl-Class-Struct-0.68-502.fc40.noarch                                        
  perl-Data-Dumper-2.188-501.fc39.x86_64                                        
  perl-Digest-1.20-500.fc39.noarch                                              
  perl-Digest-MD5-2.58-501.fc40.x86_64                                          
  perl-DynaLoader-1.54-502.fc40.x86_64                                          
  perl-Encode-4:3.19-500.fc39.x86_64                                            
  perl-Errno-1.37-502.fc40.x86_64                                               
  perl-Exporter-5.77-500.fc39.noarch                                            
  perl-Fcntl-1.15-502.fc40.x86_64                                               
  perl-File-Basename-2.86-502.fc40.noarch                                       
  perl-File-Path-2.18-500.fc39.noarch                                           
  perl-File-Temp-1:0.231.100-500.fc39.noarch                                    
  perl-File-stat-1.13-502.fc40.noarch                                           
  perl-FileHandle-2.05-502.fc40.noarch                                          
  perl-Getopt-Long-1:2.54-500.fc39.noarch                                       
  perl-Getopt-Std-1.13-502.fc40.noarch                                          
  perl-HTTP-Tiny-0.088-3.fc39.noarch                                            
  perl-IO-1.52-502.fc40.x86_64                                                  
  perl-IO-Socket-IP-0.42-1.fc39.noarch                                          
  perl-IO-Socket-SSL-2.083-3.fc39.noarch                                        
  perl-IPC-Open3-1.22-502.fc40.noarch                                           
  perl-MIME-Base64-3.16-500.fc39.x86_64                                         
  perl-Mozilla-CA-20230821-1.fc40.noarch                                        
  perl-Net-SSLeay-1.92-10.fc39.x86_64                                           
  perl-POSIX-2.13-502.fc40.x86_64                                               
  perl-PathTools-3.89-500.fc39.x86_64                                           
  perl-Pod-Escapes-1:1.07-501.fc40.noarch                                       
  perl-Pod-Perldoc-3.28.01-501.fc39.noarch                                      
  perl-Pod-Simple-1:3.45-4.fc39.noarch                                          
  perl-Pod-Usage-4:2.03-500.fc39.noarch                                         
  perl-Scalar-List-Utils-5:1.63-500.fc39.x86_64                                 
  perl-SelectSaver-1.02-502.fc40.noarch                                         
  perl-Socket-4:2.037-3.fc39.x86_64                                             
  perl-Storable-1:3.32-500.fc39.x86_64                                          
  perl-Symbol-1.09-502.fc40.noarch                                              
  perl-Term-ANSIColor-5.01-501.fc39.noarch                                      
  perl-Term-Cap-1.18-500.fc39.noarch                                            
  perl-Text-ParseWords-3.31-500.fc39.noarch                                     
  perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch                                   
  perl-Time-Local-2:1.350-3.fc39.noarch                                         
  perl-URI-5.21-1.fc40.noarch                                                   
  perl-base-2.27-502.fc40.noarch                                                
  perl-constant-1.33-501.fc39.noarch                                            
  perl-if-0.61.000-502.fc40.noarch                                              
  perl-interpreter-4:5.38.0-502.fc40.x86_64                                     
  perl-libnet-3.15-501.fc39.noarch                                              
  perl-libs-4:5.38.0-502.fc40.x86_64                                            
  perl-locale-1.10-502.fc40.noarch                                              
  perl-mro-1.28-502.fc40.x86_64                                                 
  perl-overload-1.37-502.fc40.noarch                                            
  perl-overloading-0.02-502.fc40.noarch                                         
  perl-parent-1:0.241-500.fc39.noarch                                           
  perl-podlators-1:5.01-500.fc39.noarch                                         
  perl-vars-1.05-502.fc40.noarch                                                
  petsc-mpich-3.19.6-1.fc40.x86_64                                              
  petsc-mpich-devel-3.19.6-1.fc40.x86_64                                        
  petsc-openmpi-3.19.6-1.fc40.x86_64                                            
  petsc-openmpi-devel-3.19.6-1.fc40.x86_64                                      
  pixman-0.42.2-2.fc39.x86_64                                                   
  pmix-4.1.3-1.fc40.x86_64                                                      
  poppler-23.08.0-1.fc39.x86_64                                                 
  poppler-data-0.4.11-5.fc39.noarch                                             
  poppler-glib-23.08.0-1.fc39.x86_64                                            
  procps-ng-4.0.3-5.fc40.x86_64                                                 
  ptscotch-mpich-7.0.4-1.fc40.x86_64                                            
  ptscotch-mpich-devel-7.0.4-1.fc40.x86_64                                      
  ptscotch-mpich-devel-parmetis-7.0.4-1.fc40.x86_64                             
  ptscotch-openmpi-7.0.4-1.fc40.x86_64                                          
  ptscotch-openmpi-devel-7.0.4-1.fc40.x86_64                                    
  pyproject-rpm-macros-1.10.0-1.fc40.noarch                                     
  python-pip-wheel-23.2.1-1.fc39.noarch                                         
  python-rpm-macros-3.12-4.fc40.noarch                                          
  python3-3.12.0-2.fc40.x86_64                                                  
  python3-appdirs-1.4.4-11.fc39.noarch                                          
  python3-babel-2.12.1-6.fc40.noarch                                            
  python3-blosc2-2.2.5-3.fc39.x86_64                                            
  python3-boutdata-0.1.10-4.fc39.noarch                                         
  python3-boututils-0.1.10-4.fc39.noarch                                        
  python3-brotli-1.1.0-1.fc40.x86_64                                            
  python3-cairo-1.25.0-1.fc40.x86_64                                            
  python3-certifi-2023.05.07-2.fc39.noarch                                      
  python3-cftime-1.6.2-1.fc39.x86_64                                            
  python3-charset-normalizer-3.3.0-1.fc40.noarch                                
  python3-contourpy-1.1.1-1.fc40.x86_64                                         
  python3-cpuinfo-9.0.0-5.fc39.noarch                                           
  python3-cycler-0.11.0-9.fc39.noarch                                           
  python3-cython-3.0.2-1.fc40.x86_64                                            
  python3-dateutil-1:2.8.2-10.fc39.noarch                                       
  python3-devel-3.12.0-2.fc40.x86_64                                            
  python3-docutils-0.20.1-1.fc40.noarch                                         
  python3-fonttools-4.43.1-1.fc40.x86_64                                        
  python3-fs-2.4.16-5.fc39.noarch                                               
  python3-idna-3.4-5.fc40.noarch                                                
  python3-imagesize-1.4.1-5.fc40.noarch                                         
  python3-jinja2-3.1.2-6.fc40.noarch                                            
  python3-kiwisolver-1.4.5-1.fc40.x86_64                                        
  python3-libs-3.12.0-2.fc40.x86_64                                             
  python3-lxml-4.9.3-2.fc39.x86_64                                              
  python3-markupsafe-2.1.3-2.fc39.x86_64                                        
  python3-matplotlib-3.8.0-1.fc40.x86_64                                        
  python3-matplotlib-data-3.8.0-1.fc40.noarch                                   
  python3-matplotlib-data-fonts-3.8.0-1.fc40.noarch                             
  python3-matplotlib-tk-3.8.0-1.fc40.x86_64                                     
  python3-mpmath-1.3.0-3.fc39.noarch                                            
  python3-msgpack-1.0.6-1.fc40.x86_64                                           
  python3-natsort-7.1.1-10.fc39.noarch                                          
  python3-ndindex-1.7-9.fc39.x86_64                                             
  python3-netcdf4-1.6.4-3.fc39.x86_64                                           
  python3-numexpr-2.8.5-2.fc40.x86_64                                           
  python3-numpy-1:1.26.0-1.fc40.x86_64                                          
  python3-numpy-f2py-1:1.26.0-1.fc40.x86_64                                     
  python3-olefile-0.46-21.fc39.noarch                                           
  python3-packaging-23.2-2.fc40.noarch                                          
  python3-pillow-10.0.1-1.fc40.x86_64                                           
  python3-pillow-tk-10.0.1-1.fc40.x86_64                                        
  python3-pooch-1.5.2-12.fc39.noarch                                            
  python3-pygments-2.16.1-1.fc40.noarch                                         
  python3-pyparsing-3.0.9-11.fc39.noarch                                        
  python3-requests-2.31.0-1.fc40.noarch                                         
  python3-rpm-generators-14-8.fc40.noarch                                       
  python3-rpm-macros-3.12-4.fc40.noarch                                         
  python3-scipy-1.11.1-1.fc39.x86_64                                            
  python3-setuptools-68.2.2-1.fc40.noarch                                       
  python3-six-1.16.0-12.fc39.noarch                                             
  python3-snowballstemmer-2.2.0-7.fc39.noarch                                   
  python3-sphinx-1:7.1.2-2.fc40.noarch                                          
  python3-sphinx-theme-alabaster-0.7.12-19.fc39.noarch                          
  python3-sphinxcontrib-applehelp-1.0.6-1.fc40.noarch                           
  python3-sphinxcontrib-devhelp-1.0.2-14.fc39.noarch                            
  python3-sphinxcontrib-htmlhelp-2.0.3-1.fc40.noarch                            
  python3-sphinxcontrib-jsmath-1.0.1-22.fc39.noarch                             
  python3-sphinxcontrib-qthelp-1.0.3-15.fc39.noarch                             
  python3-sphinxcontrib-serializinghtml-1.1.5-10.fc39.noarch                    
  python3-sympy-1.12-2.fc39.x86_64                                              
  python3-tables-3.8.0-6.fc40.x86_64                                            
  python3-tkinter-3.12.0-2.fc40.x86_64                                          
  python3-urllib3-1.26.17-2.fc40.noarch                                         
  rav1e-libs-0.6.6-3.fc40.x86_64                                                
  rhash-1.4.3-3.fc39.x86_64                                                     
  rpm-mpi-hooks-8-6.fc39.noarch                                                 
  rsvg-pixbuf-loader-2.57.0-3.fc40.x86_64                                       
  scalapack-common-2.2.0-6.fc40.x86_64                                          
  scalapack-mpich-2.2.0-6.fc40.x86_64                                           
  scalapack-openmpi-2.2.0-6.fc40.x86_64                                         
  shared-mime-info-2.3-1.fc40.x86_64                                            
  snappy-1.1.10-2.fc39.x86_64                                                   
  suitesparse-5.13.0-4.fc40.x86_64                                              
  suitesparse64-5.13.0-4.fc40.x86_64                                            
  sundials-6.5.1-5.fc40.x86_64                                                  
  sundials-devel-6.5.1-5.fc40.x86_64                                            
  sundials-mpich-6.5.1-5.fc40.x86_64                                            
  sundials-mpich-devel-6.5.1-5.fc40.x86_64                                      
  sundials-openmpi-6.5.1-5.fc40.x86_64                                          
  sundials-openmpi-devel-6.5.1-5.fc40.x86_64                                    
  superlu_dist-mpich-1:8.1.2-6.fc40.x86_64                                      
  superlu_dist-mpich-devel-1:8.1.2-6.fc40.x86_64                                
  superlu_dist-openmpi-1:8.1.2-6.fc40.x86_64                                    
  superlu_dist-openmpi-devel-1:8.1.2-6.fc40.x86_64                              
  svt-av1-libs-1.4.1-3.fc39.x86_64                                              
  systemd-254.5-2.fc40.x86_64                                                   
  systemd-pam-254.5-2.fc40.x86_64                                               
  systemd-rpm-macros-254.5-2.fc40.noarch                                        
  systemd-udev-254.5-2.fc40.x86_64                                              
  tcl-1:8.6.13-1.fc40.x86_64                                                    
  tcsh-6.24.10-2.fc39.x86_64                                                    
  tk-1:8.6.13-1.fc40.x86_64                                                     
  tzdata-2023c-4.fc40.noarch                                                    
  ucx-1.14.1-4.fc39.x86_64                                                      
  urw-base35-bookman-fonts-20200910-18.fc39.noarch                              
  urw-base35-c059-fonts-20200910-18.fc39.noarch                                 
  urw-base35-d050000l-fonts-20200910-18.fc39.noarch                             
  urw-base35-fonts-20200910-18.fc39.noarch                                      
  urw-base35-fonts-common-20200910-18.fc39.noarch                               
  urw-base35-gothic-fonts-20200910-18.fc39.noarch                               
  urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39.noarch                       
  urw-base35-nimbus-roman-fonts-20200910-18.fc39.noarch                         
  urw-base35-nimbus-sans-fonts-20200910-18.fc39.noarch                          
  urw-base35-p052-fonts-20200910-18.fc39.noarch                                 
  urw-base35-standard-symbols-ps-fonts-20200910-18.fc39.noarch                  
  urw-base35-z003-fonts-20200910-18.fc39.noarch                                 
  vim-filesystem-2:9.0.1984-2.fc40.noarch                                       
  xapian-core-libs-1.4.23-1.fc39.x86_64                                         
  xml-common-0.6.3-61.fc39.noarch                                               
  yaksa-0.2-3.fc37.x86_64                                                       
  zlib-devel-1.2.13-4.fc39.x86_64                                               
  zlib-ng-2.1.3-2.fc39.x86_64                                                   

Complete!
Finish: build setup for bout++-5.0.0-11.fc40.src.rpm
Start: rpmbuild bout++-5.0.0-11.fc40.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1697328000
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.67XT4u
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf BOUT++-v5.0.0.dev10626+gd935fa1ea
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/BOUT++-v5.0.0.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ rm -rf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea-SPECPARTS
+ /usr/bin/mkdir -p /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea-SPECPARTS
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2659.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2661.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2664.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2678.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/petsc_318_compat.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2693.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/fmt10.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ sed -e 's/html_theme = "sphinx_book_theme"/html_theme = "sphinxdoc"/' -i manual/sphinx/conf.py
+ rm -rf externalpackages/mpark.variant/
+ mkdir -p externalpackages/mpark.variant/include/
+ rm -rf tools/pylib/boutdata
+ rm -rf tools/pylib/boututils
++ find -L tools/pylib/ -type f
++ grep -v _boutcore_build
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/rms.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/read_inp.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/read_cxx.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_present.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_nonlinear.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_draw.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_corral.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/grate2.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/basic_info.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/__init__.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/ListDict.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/boutconfig/__init__.py.in
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/boutconfig/__init__.py.cin
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp.pyx.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/setup.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/scan_enums.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/resolve_enum_inv.pyx.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/resolve_enum.pxd.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/other_enums.hxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.h.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.cxx.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/geninput.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/generate.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/debug_setup.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/debug_helper.hxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp_openmpi_compat.hxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutexception_helper.hxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutexception_helper.cxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutcpp.pxd.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/bout_options.pxd
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/backend.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/Makefile
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/GENERATION.md
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/CMakeLists.txt
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/.gitignore
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/README.md
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/Makefile
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/.gitignore
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.9TYs9a
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ export CC=mpicc
+ CC=mpicc
+ export CXX=mpicxx
+ CXX=mpicxx
+ for mpi in mpich openmpi
+ mkdir build_mpich
+ for mpi in mpich openmpi
+ mkdir build_openmpi
+ for mpi in mpich openmpi
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64; export MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64; export MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich; export MPI_PYTHON3_SITEARCH;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich; export MPI_HOME;
__MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SYSCONFIG=/etc/mpich-x86_64; export MPI_SYSCONFIG;
MPI_SUFFIX=_mpich; export MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH;
MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB;
PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN;
test 0;'
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=mpicc
+ export CC
+ CXX=mpicxx
+ export CXX
+ /usr/bin/cmake -S . -B build_mpich -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBOUT_USE_FFTW=ON -DBOUT_USE_NETCDF=ON -DBOUT_USE_SCOREP=OFF -DBOUT_USE_SYSTEM_MPARK_VARIANT=ON -DBOUT_USE_LAPACK=ON -DBOUT_USE_NLS=ON -DBOUT_USE_SYSTEM_FMT=ON -DBOUT_USE_UUID_SYSTEM_GENERATOR=ON -DCMAKE_INSTALL_PREFIX=/ -DCMAKE_INSTALL_LIBDIR=/usr/lib64/mpich/lib -DCMAKE_INSTALL_BINDIR=/usr/lib64/mpich/bin -DCMAKE_INSTALL_INCLUDEDIR=/usr/include/mpich-x86_64/bout++/ -DCMAKE_INSTALL_DATAROOTDIR=/usr/share -DCMAKE_INSTALL_PYTHON_SITEARCH=/usr/lib64/python3.12/site-packages/mpich -DBOUT_BUILD_DOCS=ON -DBOUT_USE_PETSC=ON -DBOUT_USE_SUNDIALS=ON
-- The CXX compiler identification is GNU 13.2.1
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/lib64/mpich/bin/mpicxx - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Configuring BOUT++ version 5.0.0
-- Found Python3: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter 
-- Could NOT find ClangFormat (missing: ClangFormat_BIN) 
Traceback (most recent call last):
  File "<string>", line 1, in <module>
ModuleNotFoundError: No module named 'zoidberg'
CMake Warning (dev) at CMakeLists.txt:373 (message):
  'src/field/generated_fieldops.cxx' will not be regenerated when you make
  changes to either 'src/field/gen_fieldops.py' or
  'src/field/gen_fieldops.jinja'.  This is because either Python3 or
  clang-format is missing (see above messages for more information) or
  BOUT_GENERATE_FIELDOPS is OFF (current value: OFF).  This warning is only
  important for BOUT++ developers and can otherwise be safely ignored.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Python: /usr/bin/python3.12 (found suitable version "3.12.0", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed 
-- Found Numpy: /usr/include (found version "1.26.0") 
-- Found Cython: TRUE (found version "3.0.2") 
-- Found Bash: /usr/bin/bash (found version "5.2.15") 
-- Building BOUT++ Python interface
-- Found MPI_CXX: /usr/lib64/mpich/bin/mpicxx (found version "4.0") 
-- Found MPI: TRUE (found version "4.0")  
-- Enable OpenMP: OFF
-- HYPRE support: OFF
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.9.5") 
-- Checking for one of the modules 'PETSc>3.4.0;petsc>3.4.0'
-- Found PETSc: /usr/include/mpich-x86_64/petsc  
-- PETSc support: ON
-- Using external mpark.variant
-- Using external fmt
-- PVODE support: ON
-- Found netCDF: /usr/lib64/libnetcdf.so (found version "4.9.0") 
-- Found netCDFCxx version 4.3.1
-- Found netCDFCxx: /usr/lib64/libnetcdf_c++4.so (found version "4.3.1") 
-- NetCDF support: ON
-- Found FFTW: /usr/lib64/libfftw3.so  
-- FFTW support: ON
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE  
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/lib64/libflexiblas.so  
-- Looking for cheev_
-- Looking for cheev_ - found
-- Found LAPACK: /usr/lib64/libflexiblas.so;-lm;-ldl  
-- LAPACK support: ON
-- SLEPc support: OFF
-- SUNDIALS support: ON
-- Found Gettext: /usr/bin/msgmerge (found version "0.22") 
-- Found Intl: built in to C library  
-- libuuid not found, using fallback UUID generator
-- UUID_SYSTEM_GENERATOR: FALSE
-- Enable coverage: OFF
-- Git revision: Unknown
-- Performing Test HAS_FLAG__Wnull_dereference
-- Performing Test HAS_FLAG__Wnull_dereference - Success
-- Warning flag is supported by compiler: -Wnull-dereference
-- Found negative flag: -Wno-cast-function-type
   replaced with -Wcast-function-type
-- Performing Test HAS_FLAG__Wno_cast_function_type
-- Performing Test HAS_FLAG__Wno_cast_function_type - Success
-- Warning flag is supported by compiler: -Wno-cast-function-type
-- Runtime checking level: CHECK=2
-- Message stack: BOUT_USE_MSGSTACK=ON
-- Extra debug output: BOUT_USE_OUTPUT_DEBUG=OFF
-- Signal handling: BOUT_USE_SIGNAL=ON
-- Output coloring: BOUT_USE_COLOR=ON
-- Field name tracking: BOUT_USE_TRACK=ON
-- Signalling floating point exceptions: BOUT_USE_SIGFPE=OFF
-- Enable backtrace: BOUT_USE_BACKTRACE=ON
-- Performing Test HAS_PRETTY_FUNCTION
-- Performing Test HAS_PRETTY_FUNCTION - Success
-- Setting build type to 'RelWithDebInfo' as none was specified.
CMake Deprecation Warning at externalpackages/googletest/CMakeLists.txt:4 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- The C compiler identification is GNU 13.2.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/lib64/mpich/bin/mpicc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
CMake Deprecation Warning at externalpackages/googletest/googlemock/CMakeLists.txt:45 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


CMake Deprecation Warning at externalpackages/googletest/googletest/CMakeLists.txt:56 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Found Python: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter 
-- Not building test test-laplace-hypre3d, requirement not met: BOUT_HAS_HYPRE
-- Not building test test-laplacexy2-hypre, requirement not met: BOUT_HAS_HYPRE
-- Not building test test-slepc-solver, requirement not met: BOUT_HAS_SLEPC
-- Not building test MMS-advection-arakawa, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-central, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-upwind, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-weno3, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-diffusion2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-hw, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-laplace, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-advection, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-d2dx2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-d2dz2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-diffusion, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-fci, requirement not met: zoidberg_FOUND
-- Not building test MMS-time, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-time-petsc, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building example test_laplacexy_hypre, requirement not met: BOUT_HAS_HYPRE
-- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot 
-- Found Sphinx: /usr/bin/sphinx-build  

   --------------------------------
     BOUT++ Configuration Summary
   --------------------------------

   Bundled PVODE support    : ON
   PETSc support            : ON
   SLEPc support            : OFF
   SUNDIALS support         : ON
   HYPRE support            : OFF
   NetCDF support           : ON
   FFTW support             : ON
   LAPACK support           : ON
   OpenMP support           : OFF
   Natural language support : ON
   ScoreP support           : OFF
   System UUID generator    : FALSE
   Extra debug output       : OFF
   Runtime error check level: 2
   Signal handling          : ON
   Output coloring          : ON
   Field name tracking      : ON
   Floating point exceptions: OFF
   Backtrace enabled        : ON
   RAJA enabled             : OFF
   Umpire enabled           : OFF
   Caliper enabled          : OFF
   CUDA enabled             : OFF
   Metric type              : 2D
   Python API support       : ON
   Sanitizers enabled       : None

   === Python ===

   Make sure that the tools/pylib directory is in your PYTHONPATH
   e.g. by adding to your ~/.bashrc file

       export PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib:/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib:$PYTHONPATH

*** Now run `cmake --build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich` to compile BOUT++ ***

-- Configuring done (4.4s)
-- Generating done (0.2s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    CMAKE_INSTALL_DO_STRIP
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    LIB_SUFFIX
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR


-- Build files have been written to: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich
+ /usr/bin/cmake --build build_mpich -j2 --verbose
Change Dir: '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'

Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j2
/usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich//CMakeFiles/progress.marks
/usr/bin/gmake  -f CMakeFiles/Makefile2 all
gmake[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -MF CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o.d -o CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/pvbbdpre.cpp
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o -MF CMakeFiles/pvode.dir/source/cvode.cpp.o.d -o CMakeFiles/pvode.dir/source/cvode.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘void* pvode::CVodeMalloc(integer, RhsFn, real, N_Vector, int, int, int, real*, void*, void*, FILE*, int, long int*, real*, void*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:178:25: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘pvode::integer’ {aka ‘int’} [-Wformat=]
  178 | #define CVM             "CVodeMalloc-- "
      |                         ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:182:19: note: in expansion of macro ‘CVM’
  182 | #define MSG_BAD_N CVM "N=%ld < 1 illegal.\n\n"
      |                   ^~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:496:17: note: in expansion of macro ‘MSG_BAD_N’
  496 |     fprintf(fp, MSG_BAD_N, N);
      |                 ^~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:182:28: note: format string is defined here
  182 | #define MSG_BAD_N CVM "N=%ld < 1 illegal.\n\n"
      |                          ~~^
      |                            |
      |                            long int
      |                          %d
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o -MF CMakeFiles/pvpre.dir/precon/band.cpp.o.d -o CMakeFiles/pvpre.dir/precon/band.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp: In function ‘pvode::integer pvode::gbfa(real**, integer, integer, integer, integer, integer*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp:189:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  189 |     if (swap = (l != k)) {
      |         ~~~~~^~~~~~~~~~
In function ‘pvode::CVnlsFunctional(pvode::CVodeMemRec*)’,
    inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1826:45,
    inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1358:18,
    inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:882:19:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1876:49: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized]
 1876 |     if ((m==maxcor) || ((m >= 2) && (del > RDIV * delp)))
      |                                                 ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1843:13: note: ‘delp’ was declared here
 1843 |   real del, delp, dcon;
      |             ^~~~
In function ‘pvode::CVNewtonIteration(pvode::CVodeMemRec*)’,
    inlined from ‘pvode::CVnlsNewton(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1944:28,
    inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1827:41,
    inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1358:18,
    inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:882:19:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:2021:50: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized]
 2021 |     if ((m == maxcor) || ((m >= 2) && (del > RDIV*delp))) {
      |                                                  ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1971:13: note: ‘delp’ was declared here
 1971 |   real del, delp, dcon;
      |             ^~~~
[  0%] Linking CXX shared library ../../lib/libpvpre.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvpre.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvpre.so.1.0.0 -o ../../lib/libpvpre.so.1.0.0 CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o CMakeFiles/pvpre.dir/precon/band.cpp.o 
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o -MF CMakeFiles/pvode.dir/source/nvector.cpp.o.d -o CMakeFiles/pvode.dir/source/nvector.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:429: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  429 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:485: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  485 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:543: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  543 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:565: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  565 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:583: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  583 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:698: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  698 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:714: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  714 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:730: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  730 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:745: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  745 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:761: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  761 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:777: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  777 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  793 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:809: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  809 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:824: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  824 |     #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:831: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  831 |     #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:837: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  837 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:850: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  850 |   #pragma omp parallel for
      | 
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp: In function ‘void pvode::N_VLinearSum(real, N_Vector, real, N_Vector, N_Vector)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:189:12: warning: unused variable ‘v’ [-Wunused-variable]
  189 |   N_Vector v, v1, v2;
      |            ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp: In function ‘pvode::real pvode::N_VWL2Norm(N_Vector, N_Vector)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:533:14: warning: variable ‘N_global’ set but not used [-Wunused-but-set-variable]
  533 |   integer N, N_global;
      |              ^~~~~~~~
[  0%] Built target pvpre
/usr/bin/gmake  -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/mofiles.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[  0%] Generating locale/es/libbout.gmo, _mo_file_es
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/es/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/es/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/es/libbout.po
[  2%] Generating locale/de/libbout.gmo, _mo_file_de
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/de/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/de/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/de/libbout.po
[  2%] Generating locale/fr/libbout.gmo, _mo_file_fr
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/fr/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/fr/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/fr/libbout.po
[  2%] Generating locale/zh_CN/libbout.gmo, _mo_file_zh_CN
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/zh_CN/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/zh_CN/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/zh_CN/libbout.po
[  5%] Generating locale/zh_TW/libbout.gmo, _mo_file_zh_TW
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/zh_TW/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/zh_TW/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/zh_TW/libbout.po
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[  5%] Built target mofiles
[  5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o -MF CMakeFiles/pvode.dir/source/llnlmath.cpp.o.d -o CMakeFiles/pvode.dir/source/llnlmath.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/llnlmath.cpp
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -MF CMakeFiles/pvode.dir/source/cvspgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvspgmr.cpp
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o -MF CMakeFiles/pvode.dir/source/spgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/spgmr.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o -MF CMakeFiles/pvode.dir/source/iterativ.cpp.o.d -o CMakeFiles/pvode.dir/source/iterativ.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/iterativ.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp: In function ‘int pvode::SpgmrSolve(SpgmrMem, void*, N_Vector, N_Vector, int, int, real, int, void*, N_Vector, N_Vector, ATimesFn, PSolveFn, real*, int*, int*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:159:8: warning: unused variable ‘s_r0_norm’ [-Wunused-variable]
  159 |   real s_r0_norm, beta, rotation_product, r_norm, s_product, rho;
      |        ^~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:328:17: warning: ‘krydim’ may be used uninitialized [-Wmaybe-uninitialized]
  328 |     for (i=1; i <= krydim; i++) yg[i]=ZERO;
      |               ~~^~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:161:36: note: ‘krydim’ was declared here
  161 |   int i, j, k, l, l_plus_1, l_max, krydim, ier, ntries;
      |                                    ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:386:3: warning: ‘rho’ may be used uninitialized [-Wmaybe-uninitialized]
  386 |   if (rho < beta) {
      |   ^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:159:62: note: ‘rho’ was declared here
  159 |   real s_r0_norm, beta, rotation_product, r_norm, s_product, rho;
      |                                                              ^~~
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o -MF CMakeFiles/pvode.dir/source/cvdiag.cpp.o.d -o CMakeFiles/pvode.dir/source/cvdiag.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvdiag.cpp
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o -MF CMakeFiles/pvode.dir/source/smalldense.cpp.o.d -o CMakeFiles/pvode.dir/source/smalldense.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp: In function ‘pvode::integer pvode::gefa(real**, integer, integer*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp:82:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
   82 |     if (swap = (l != k)) {
      |         ~~~~~^~~~~~~~~~
[ 11%] Linking CXX shared library ../../lib/libpvode.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvode.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvode.so.1.0.0 -o ../../lib/libpvode.so.1.0.0 CMakeFiles/pvode.dir/source/cvode.cpp.o CMakeFiles/pvode.dir/source/nvector.cpp.o CMakeFiles/pvode.dir/source/llnlmath.cpp.o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o CMakeFiles/pvode.dir/source/spgmr.cpp.o CMakeFiles/pvode.dir/source/iterativ.cpp.o CMakeFiles/pvode.dir/source/cvdiag.cpp.o CMakeFiles/pvode.dir/source/smalldense.cpp.o 
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 11%] Built target pvode
/usr/bin/gmake  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 11%] Generating bout++-time.cxx
/usr/bin/cmake -P /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/cmake/GenerateDateTimeFile.cmake
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
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gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
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[ 14%] Building CXX object CMakeFiles/bout++.dir/src/bout++.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/bout++.cxx.o -MF CMakeFiles/bout++.dir/src/bout++.cxx.o.d -o CMakeFiles/bout++.dir/src/bout++.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/bout++.cxx
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field.cxx.o -MF CMakeFiles/bout++.dir/src/field/field.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field.cxx
[ 14%] Building CXX object CMakeFiles/bout++.dir/src/field/field2d.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field2d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field2d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field2d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field2d.cxx
[ 14%] Building CXX object CMakeFiles/bout++.dir/src/field/field3d.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field3d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field3d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field3d.cxx
[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field_data.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field_data.cxx.o -MF CMakeFiles/bout++.dir/src/field/field_data.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field_data.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field_data.cxx
[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field_factory.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field_factory.cxx.o -MF CMakeFiles/bout++.dir/src/field/field_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field_factory.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field_factory.cxx
[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o -MF CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o.d -o CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/fieldgenerators.cxx
[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o -MF CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o.d -o CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/fieldgroup.cxx
[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o -MF CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o.d -o CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/fieldperp.cxx
[ 20%] Building CXX object CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o
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[ 20%] Building CXX object CMakeFiles/bout++.dir/src/field/globalfield.cxx.o
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[ 20%] Building CXX object CMakeFiles/bout++.dir/src/field/initialprofiles.cxx.o
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[ 20%] Building CXX object CMakeFiles/bout++.dir/src/field/vecops.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/vecops.cxx.o -MF CMakeFiles/bout++.dir/src/field/vecops.cxx.o.d -o CMakeFiles/bout++.dir/src/field/vecops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/vecops.cxx
[ 23%] Building CXX object CMakeFiles/bout++.dir/src/field/vector2d.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/vector2d.cxx.o -MF CMakeFiles/bout++.dir/src/field/vector2d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/vector2d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/vector2d.cxx
[ 23%] Building CXX object CMakeFiles/bout++.dir/src/field/vector3d.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/vector3d.cxx.o -MF CMakeFiles/bout++.dir/src/field/vector3d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/vector3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/vector3d.cxx
[ 23%] Building CXX object CMakeFiles/bout++.dir/src/field/where.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/where.cxx.o -MF CMakeFiles/bout++.dir/src/field/where.cxx.o.d -o CMakeFiles/bout++.dir/src/field/where.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/where.cxx
[ 23%] Building CXX object CMakeFiles/bout++.dir/src/invert/fft_fftw.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/fft_fftw.cxx.o -MF CMakeFiles/bout++.dir/src/invert/fft_fftw.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/fft_fftw.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/fft_fftw.cxx
[ 26%] Building CXX object CMakeFiles/bout++.dir/src/invert/lapack_routines.cxx.o
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[ 26%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplace/impls/cyclic/cyclic_laplace.cxx.o
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[ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2.cxx
[ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2_hypre.cxx
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2_hypre.cxx:1:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invert/laplacexy2_hypre.hxx:41:2: warning: #warning LaplaceXY requires Hypre. No LaplaceXY available [-Wcpp]
   41 | #warning LaplaceXY requires Hypre. No LaplaceXY available
      |  ^~~~~~~
[ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx
[ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx
[ 41%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexz/laplacexz.cxx
[ 41%] Building CXX object CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/parderiv/impls/cyclic/cyclic.cxx
[ 41%] Building CXX object CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o -MF CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/parderiv/invert_parderiv.cxx
[ 41%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_factory.cxx
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_region.cxx
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/coordinates.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In function ‘void verifyNumPoints(BoundaryRegion*, int)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:80:21: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
   80 |     if (mesh->firstY()) {
      |         ~~~~~~~~~~~~^~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field_factory.hxx:32,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_standard.hxx:9,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:1:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:83:20: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
   83 |     if (mesh->lastY()) {
      |         ~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:473:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  473 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  474 |                                t);
      |                                ~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field_data.hxx:51,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field.hxx:39,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_op.hxx:9,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_standard.hxx:6:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:517:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  517 |               val = fg->generate(xnorm, TWOPI * ynorm,
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
  518 |                                  TWOPI * (zk - 0.5) / (mesh->LocalNz), t);
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O3::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:978:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  978 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  979 |                                t);
      |                                ~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O4::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:1444:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
 1444 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1445 |                                t);
      |                                ~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:2152:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
 2152 |               val = fg->generate(xnorm, TWOPI * ynorm,
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
 2153 |                                  TWOPI * (zk - 0.5) / (mesh->LocalNz), t);
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/coordinates_accessor.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/data/gridfromfile.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/data/gridfromoptions.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/difops.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/difops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/difops.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx: In function ‘FV::communicateFluxes(Field3D&)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx:517:15: warning: ‘xout’ may be used uninitialized [-Wmaybe-uninitialized]
  517 |     mesh->wait(xout);
      |     ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx:488:20: note: ‘xout’ was declared here
  488 |   comm_handle xin, xout;
      |                    ^~~~
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/index_derivs.cxx
In file included from /usr/include/c++/13/bits/shared_ptr.h:53,
                 from /usr/include/c++/13/memory:80,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field.hxx:36,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/options.hxx:43,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/deriv_store.hxx:42,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:48,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.hxx:8,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:36:
In member function ‘std::__shared_ptr<ArrayData<double>, (__gnu_cxx::_Lock_policy)2>::operator bool() const’,
    inlined from ‘std::operator==<ArrayData<double> >(std::shared_ptr<ArrayData<double> > const&, decltype(nullptr))bool’ at /usr/include/c++/13/bits/shared_ptr.h:562:14,
    inlined from ‘Array<double, ArrayData<double> >::empty() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/array.hxx:270:44,
    inlined from ‘Field3D::isAllocated() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field3d.hxx:203:48,
    inlined from ‘BoutMesh::pack_data(std::vector<FieldData*, std::allocator<FieldData*> > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:2262:7:
/usr/include/c++/13/bits/shared_ptr_base.h:1670:16: warning: potential null pointer dereference [-Wnull-dereference]
 1670 |       { return _M_ptr != nullptr; }
      |                ^~~~~~
In member function ‘std::__shared_ptr<ArrayData<double>, (__gnu_cxx::_Lock_policy)2>::operator bool() const’,
    inlined from ‘std::operator==<ArrayData<double> >(std::shared_ptr<ArrayData<double> > const&, decltype(nullptr))bool’ at /usr/include/c++/13/bits/shared_ptr.h:562:14,
    inlined from ‘Array<double, ArrayData<double> >::empty() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/array.hxx:270:44,
    inlined from ‘Field2D::isAllocated() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:106:48,
    inlined from ‘BoutMesh::pack_data(std::vector<FieldData*, std::allocator<FieldData*> > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:2273:7:
/usr/include/c++/13/bits/shared_ptr_base.h:1670:16: warning: potential null pointer dereference [-Wnull-dereference]
 1670 |       { return _M_ptr != nullptr; }
      |                ^~~~~~
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation_xz.cxx
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/bilinear_xz.cxx
[ 52%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/hermite_spline_xz.cxx
[ 52%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/hermite_spline_z.cxx
[ 52%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/interpolation_z.cxx
[ 52%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/lagrange_4pt_xz.cxx
[ 55%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx
[ 55%] Building CXX object CMakeFiles/bout++.dir/src/mesh/mesh.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/mesh.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/mesh.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/mesh.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/mesh.cxx
[ 55%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel/fci.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel/fci.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel/fci.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel/fci.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/parallel/fci.cxx
[ 55%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/parallel/identity.cxx
[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/parallel/shiftedmetric.cxx
[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetricinterp.cxx.o
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[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel_boundary_op.cxx.o
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[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o
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[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o
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[ 61%] Building CXX object CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o -MF CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/gyro_average.cxx
[ 61%] Building CXX object CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o -MF CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/physicsmodel.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o -MF CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/smoothing.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/snb.cxx.o -MF CMakeFiles/bout++.dir/src/physics/snb.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/snb.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/snb.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o -MF CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/sourcex.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/adams_bashforth/adams_bashforth.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/arkode/arkode.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/euler/euler.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx: In member function ‘virtual int CvodeSolver::init()’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:378:33: warning: ‘int CVSpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use CVodeSetLinearSolver instead [-Wdeprecated-declarations]
  378 |       if (CVSpilsSetLinearSolver(cvode_mem, sun_solver) != CV_SUCCESS) {
      |           ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:49:
/usr/include/mpich-x86_64/cvode/cvode_spils.h:43:5: note: declared here
   43 | int CVSpilsSetLinearSolver(void *cvode_mem, SUNLinearSolver LS);
      |     ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:416:37: warning: ‘int CVSpilsSetPreconditioner(void*, CVSpilsPrecSetupFn, CVSpilsPrecSolveFn)’ is deprecated: use CVodeSetPreconditioner instead [-Wdeprecated-declarations]
  416 |         if (CVSpilsSetPreconditioner(cvode_mem, nullptr, cvode_pre_shim)) {
      |             ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/mpich-x86_64/cvode/cvode_spils.h:49:5: note: declared here
   49 | int CVSpilsSetPreconditioner(void *cvode_mem, CVSpilsPrecSetupFn pset,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:428:33: warning: ‘int CVSpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use CVodeSetLinearSolver instead [-Wdeprecated-declarations]
  428 |       if (CVSpilsSetLinearSolver(cvode_mem, sun_solver) != CV_SUCCESS) {
      |           ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/mpich-x86_64/cvode/cvode_spils.h:43:5: note: declared here
   43 | int CVSpilsSetLinearSolver(void *cvode_mem, SUNLinearSolver LS);
      |     ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:442:29: warning: ‘int CVSpilsSetJacTimes(void*, CVSpilsJacTimesSetupFn, CVSpilsJacTimesVecFn)’ is deprecated: use CVodeSetJacTimes instead [-Wdeprecated-declarations]
  442 |       if (CVSpilsSetJacTimes(cvode_mem, nullptr, cvode_jac) != CV_SUCCESS) {
      |           ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/mpich-x86_64/cvode/cvode_spils.h:53:5: note: declared here
   53 | int CVSpilsSetJacTimes(void *cvode_mem, CVSpilsJacTimesSetupFn jtsetup,
      |     ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx: In member function ‘virtual int CvodeSolver::run()’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:533:28: warning: ‘int CVSpilsGetNumPrecSolves(void*, long int*)’ is deprecated: use CVodeGetNumPrecSolves instead [-Wdeprecated-declarations]
  533 |     CVSpilsGetNumPrecSolves(cvode_mem, &temp_long_int);
      |     ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/mpich-x86_64/cvode/cvode_spils.h:64:5: note: declared here
   64 | int CVSpilsGetNumPrecSolves(void *cvode_mem, long int *npsolves);
      |     ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:535:26: warning: ‘int CVSpilsGetNumLinIters(void*, long int*)’ is deprecated: use CVodeGetNumLinIters instead [-Wdeprecated-declarations]
  535 |     CVSpilsGetNumLinIters(cvode_mem, &temp_long_int);
      |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/mpich-x86_64/cvode/cvode_spils.h:67:5: note: declared here
   67 | int CVSpilsGetNumLinIters(void *cvode_mem, long int *nliters);
      |     ^~~~~~~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx: In member function ‘virtual int IdaSolver::init()’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:199:30: warning: ‘int IDASpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use IDASetLinearSolver instead [-Wdeprecated-declarations]
  199 |   if (IDASpilsSetLinearSolver(idamem, sun_solver) != IDA_SUCCESS) {
      |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:45:
/usr/include/mpich-x86_64/ida/ida_spils.h:44:5: note: declared here
   44 | int IDASpilsSetLinearSolver(void *ida_mem, SUNLinearSolver LS);
      |     ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:234:36: warning: ‘int IDASpilsSetPreconditioner(void*, IDASpilsPrecSetupFn, IDASpilsPrecSolveFn)’ is deprecated: use IDASetPreconditioner instead [-Wdeprecated-declarations]
  234 |       if (IDASpilsSetPreconditioner(idamem, nullptr, ida_pre_shim)) {
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/mpich-x86_64/ida/ida_spils.h:47:5: note: declared here
   47 | int IDASpilsSetPreconditioner(void *ida_mem, IDASpilsPrecSetupFn pset,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx:679:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  679 |           PETSC_NULL,
      |             ^~~~~~~~~                                                                 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx:681:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  681 |           PETSC_NULL, &Jmf);
      |             ^~~~~~~~~~~~~~~~                                                          
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:264:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  264 |   ierr = PetscOptionsGetBool(PETSC_NULL, PETSC_NULL, "-interpolate", &interpolate,
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~    
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:264:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:265:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  265 |                              PETSC_NULL);
      |             ^                ~~~~~~~~~~~~                                             
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:276:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  276 |   ierr = PetscOptionsGetString(PETSC_NULL, PETSC_NULL, "-output_name", this->output_name,
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:276:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:287:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  287 |     ierr = SNESMonitorSet(snes, PetscSNESMonitor, this, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                  
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:290:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  290 |     ierr = TSMonitorSet(ts, PetscMonitor, this, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                          
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:402:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  402 |   ierr = PetscOptionsGetString(PETSC_NULL, PETSC_NULL, "-J_load", load_file,
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~          
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:402:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:454:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  454 |     ierr = MatSeqAIJSetPreallocation(J, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                        
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:456:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  456 |     ierr = MatMPIAIJSetPreallocation(J, prealloc, PETSC_NULL, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:456:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:461:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  461 |     ierr = MatSeqBAIJSetPreallocation(J, dof, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                  
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:463:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  463 |     ierr = MatMPIBAIJSetPreallocation(J, dof, prealloc, PETSC_NULL, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:463:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:466:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  466 |     ierr = PetscOptionsHasName(PETSC_NULL, PETSC_NULL, "-J_slowfd", &J_slowfd);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~       
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:466:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:473:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  473 |       ierr = SNESSetJacobian(snes, J, J, SNESComputeJacobianDefault, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~     
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:527:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  527 |   ierr = PetscOptionsHasName(PETSC_NULL, PETSC_NULL, "-J_write", &J_write);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~           
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:527:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:879:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  879 |   ierr = SNESGetJacobian(snes, &A, &B, PETSC_NULL, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                       
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:879:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:893:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  893 |   ierr = SNESGetFunction(snes, &F, PETSC_NULL, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:893:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:916:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  916 |   ierr = SNESGetFunction(snes, &func, PETSC_NULL, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                        
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:916:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
[ 70%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/power/power.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/pvode/pvode.cxx
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[ 76%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/rkgeneric/rkscheme.cxx
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[ 76%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx:567:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  567 |           PETSC_NULL,
      |             ^~~~~~~~~                                                                 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx:569:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  569 |           PETSC_NULL, &Jmf);
      |             ^~~~~~~~~~~~~~~~                                                          
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/solver.cxx.o -MF CMakeFiles/bout++.dir/src/solver/solver.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/solver.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/solver.cxx
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o -MF CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/bout_types.cxx
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/boutcomm.cxx
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/boutexception.cxx
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/derivs.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -MF CMakeFiles/bout++.dir/src/sys/derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/derivs.cxx
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -MF CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx: In member function ‘virtual double FieldGenerator::generate(const bout::generator::Context&)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx:43:18: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
   43 |   return generate(ctx.x(), ctx.y(), ctx.z(), ctx.t());
      |          ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx:25:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -MF CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/generator_context.cxx
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/hyprelib.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -MF CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/msg_stack.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_ini.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_netcdf.cxx
In file included from /usr/include/mpich-x86_64/ncFile.h:2,
                 from /usr/include/mpich-x86_64/netcdf:16,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_netcdf.cxx:14:
/usr/include/mpich-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -MF CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/optionsreader.cxx
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/output.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/output.cxx.o -MF CMakeFiles/bout++.dir/src/sys/output.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/output.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/output.cxx
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/petsclib.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/petsclib.cxx:29:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
   29 |       PetscInitialize(pargc, pargv, PETSC_NULL, help);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/range.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/range.cxx.o -MF CMakeFiles/bout++.dir/src/sys/range.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/range.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/range.cxx
[ 91%] Building CXX object CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/slepclib.cxx
[ 91%] Building CXX object CMakeFiles/bout++.dir/src/sys/timer.cxx.o
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[ 91%] Building CXX object CMakeFiles/bout++.dir/src/sys/type_name.cxx.o
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[ 91%] Building CXX object CMakeFiles/bout++.dir/src/sys/utils.cxx.o
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[ 94%] Building CXX object CMakeFiles/bout++.dir/bout++-time.cxx.o
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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/spt/spt.cxx: In member function ‘__ct_base ’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/spt/spt.cxx:68:37: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
   68 |   alldata = new SPT_data[ye - ys + 1];
      |                                     ^
/usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here
  128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc)
      |                          ^
/usr/bin/cmake -E cmake_symlink_library lib/libbout++.so.5.0.0 lib/libbout++.so.5.0.0 lib/libbout++.so
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 94%] Built target bout++
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 97%] Generating resolve_enum.pxd
[ 97%] Generating boutcpp.pxd
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py boutcpp.pxd.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/boutcpp.pxd
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py resolve_enum.pxd.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/resolve_enum.pxd
[ 97%] Generating boutpp.pyx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build
[100%] Generating helper.cxx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py boutpp.pyx.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/boutpp.pyx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py helper.cxx.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/helper.cxx
[100%] Generating helper.h
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py helper.h.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/helper.h
[100%] Cythonizing python interface
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy boutpp.pyx libboutpp.pyx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/python3.12 -m cython libboutpp.pyx --cplus -3 -X binding=True -X embedsignature=True
warning: resolve_enum.pxd:49:21: 'deflt' redeclared 
warning: resolve_enum.pxd:189:24: 'Standard' redeclared 
warning: resolve_enum.pxd:223:15: 'Standard' redeclared 
warning: bout_options.pxd:22:21: Rvalue-reference as function argument not supported
warning: bout_options.pxd:24:32: Rvalue-reference as function argument not supported
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o
[100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o -MF CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o.d -o CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o -MF CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o.d -o CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/helper.cxx
In file included from /usr/include/numpy/ndarraytypes.h:1929,
                 from /usr/include/numpy/ndarrayobject.h:12,
                 from /usr/include/numpy/arrayobject.h:5,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:1195:
/usr/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
[100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -MF CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o.d -o CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/boutexception_helper.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:40860:46: warning: ‘__pyx_obj_9libboutpp_Vector2D* __pyx_f_9libboutpp_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function]
40860 | static struct __pyx_obj_9libboutpp_Vector2D *__pyx_f_9libboutpp_v2dFromObj(Vector2D __pyx_v_i) {
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_f_12resolve_enum_resolve_cell_loc(_object*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:9195:10: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized]
 9195 |   return __pyx_r;
      |          ^~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:8838:12: note: ‘__pyx_r’ was declared here
 8838 |   CELL_LOC __pyx_r;
      |            ^~~~~~~
In function ‘__pyx_pf_9libboutpp_48bracket(_object*, __pyx_obj_9libboutpp_Field3D*, __pyx_obj_9libboutpp_Field3D*, _object*, _object*)’,
    inlined from ‘__pyx_pw_9libboutpp_49bracket(_object*, _object* const*, long, _object*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:63918:42:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:64012:65: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized]
64012 |   __pyx_t_1 = ((PyObject *)__pyx_f_9libboutpp_f3dFromObj(bracket((__pyx_v_a->cobj[0]), (__pyx_v_b->cobj[0]), __pyx_v_method_, __pyx_v_outloc_))); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 2901, __pyx_L1_error)
      |                                                          ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_pw_9libboutpp_49bracket(_object*, _object* const*, long, _object*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:10706:18: note: ‘__pyx_r’ was declared here
10706 |   BRACKET_METHOD __pyx_r;
      |                  ^~~~~~~
[100%] Linking CXX shared library libboutpp.cpython-312-x86_64-linux-gnu.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E cmake_link_script CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libboutpp.cpython-312-x86_64-linux-gnu.so -o libboutpp.cpython-312-x86_64-linux-gnu.so "CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o" "CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o" "CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o"  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib: ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[100%] Built target boutpp.cpython-312-x86_64-linux-gnu
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[100%] Building python interface
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-312-x86_64-linux-gnu.so /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[100%] Built target boutpp
gmake[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles 0

+ /usr/bin/cmake --build build_mpich/manual -j2 --verbose
Change Dir: '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual'

Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j2
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual//CMakeFiles/progress.marks
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/gmake  -f CMakeFiles/Makefile2 manual/all
gmake[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/CMakeFiles/sphinx-html.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[100%] Generating HTML documentation with Sphinx in /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/docs
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual && /usr/bin/sphinx-build -b html /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/docs
Running Sphinx v7.1.2
WARNING: Invalid configuration value found: 'language = None'. Update your configuration to a valid language code. Falling back to 'en' (English).
breathe module not installed
recommonmark module not installed
making output directory... done
building [mo]: targets for 0 po files that are out of date
writing output... 
building [html]: targets for 46 source files that are out of date
updating environment: [new config] 46 added, 0 changed, 0 removed
No mlab available
reading sources... [100%] user_docs/variable_init
looking for now-outdated files... /usr/lib/python3.12/site-packages/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them
WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised:
No module named 'enthought'
/usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:5: ERROR: Unexpected indentation.
/usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:6: WARNING: Block quote ends without a blank line; unexpected unindent.
/usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:56: WARNING: Footnote [1] is not referenced.
WARNING: autodoc: failed to import module 'boutpp'; the following exception was raised:
No module named 'boutpp'
WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised:
No module named 'crosslines'
WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised:
No module named 'tvtk'
WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised:
No module named 'tvtk'
/usr/lib/python3.12/site-packages/boututils/calculus.py:docstring of boututils.calculus.deriv2D:14: ERROR: Unexpected indentation.
WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'boundary' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'field' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'fieldtracer' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'grid' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'plot' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'poloidal_grid' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'progress' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'rzline' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'zoidberg' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/file_io.rst:114: ERROR: Unknown interpreted text role "py".
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/boundary_options.rst:120: WARNING: Footnote [#] is not referenced.
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:447: WARNING: Title underline too short.

Working with an active ``conda`` environment
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:453: ERROR: Unexpected indentation.
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:454: WARNING: Block quote ends without a blank line; unexpected unindent.
/usr/lib/python3.12/site-packages/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :noindex: for one of them
/usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :noindex: for one of them
/usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata.collect.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :noindex: for one of them
/usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata.collect.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/running_bout.rst:463: WARNING: Literal block expected; none found.
none found
pickling environment... done
checking consistency... done
preparing documents... WARNING: unsupported theme option 'repository_url' given
done
copying assets... WARNING: unsupported theme option 'path_to_docs' given
WARNING: unsupported theme option 'use_edit_page_button' given
WARNING: unsupported theme option 'use_repository_button' given
WARNING: unsupported theme option 'use_issues_button' given
WARNING: unsupported theme option 'home_page_in_toc' given
copying static files... done
copying extra files... done
done
writing output... [100%] user_docs/variable_init
/usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator.normal'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 5]
    numpy.random.Generator.normal
    -----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5]
      numpy.random.Generator.normal
      -----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator.normal
        -----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator.normal
        -----^

/usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 5]
    numpy.random.Generator
    -----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5]
      numpy.random.Generator
      -----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator
        -----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator
        -----^

/usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: undefined label: 'random-quick-start'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: '../_breathe_autogen/file/field2d_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: '../_breathe_autogen/file/field3d_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: '../_breathe_autogen/file/field__data_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:112: WARNING: unknown document: '../_breathe_autogen/file/initialprofiles_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/vecops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:124: WARNING: unknown document: '../_breathe_autogen/file/vector2d_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:129: WARNING: unknown document: '../_breathe_autogen/file/vector3d_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:133: WARNING: unknown document: '../_breathe_autogen/file/where_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft__fftw_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:148: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:154: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:156: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:160: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:162: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:166: WARNING: unknown document: '../_breathe_autogen/file/spt_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:168: WARNING: unknown document: '../_breathe_autogen/file/spt_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:173: WARNING: unknown document: '../_breathe_autogen/file/invert__parderiv_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:181: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:183: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:187: WARNING: unknown document: '../_breathe_autogen/file/lapack__routines_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:191: WARNING: unknown document: '../_breathe_autogen/file/boundary__factory_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: '../_breathe_autogen/file/boundary__region_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:200: WARNING: unknown document: '../_breathe_autogen/file/boundary__standard_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: '../_breathe_autogen/file/interpolation_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:212: WARNING: unknown document: '../_breathe_autogen/file/mesh_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:220: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:224: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:229: WARNING: unknown document: '../_breathe_autogen/file/gyro__average_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:231: WARNING: unknown document: '../_breathe_autogen/file/smoothing_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: '../_breathe_autogen/file/sourcex_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: '../_breathe_autogen/file/solver_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:247: WARNING: unknown document: '../_breathe_autogen/file/cvode_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:251: WARNING: unknown document: '../_breathe_autogen/file/cvode_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:255: WARNING: unknown document: '../_breathe_autogen/file/ida_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:259: WARNING: unknown document: '../_breathe_autogen/file/ida_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:263: WARNING: unknown document: '../_breathe_autogen/file/petsc_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:266: WARNING: unknown document: '../_breathe_autogen/file/petsc_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:270: WARNING: unknown document: '../_breathe_autogen/file/pvode_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: '../_breathe_autogen/file/pvode_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:278: WARNING: unknown document: '../_breathe_autogen/file/boutcomm_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:280: WARNING: unknown document: '../_breathe_autogen/file/boutexception_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: '../_breathe_autogen/file/msg__stack_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: '../_breathe_autogen/file/options_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:300: WARNING: unknown document: '../_breathe_autogen/file/optionsreader_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:302: WARNING: unknown document: '../_breathe_autogen/file/output_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:304: WARNING: unknown document: '../_breathe_autogen/file/range_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: '../_breathe_autogen/file/timer_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:312: WARNING: unknown document: '../_breathe_autogen/file/utils_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:318: WARNING: unknown document: '../_breathe_autogen/file/optionparser_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:320: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:322: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8hxx'
generating indices... genindex /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field2d_8hxx'
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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/differential_operators.rst:538: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/laplacian.rst:185: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/output_and_post.rst:581: WARNING: Could not lex literal_block 'AppendTo[$Path,"/full/path/to/BOUT/tools/mathematicalib"]' as "mathematica". Highlighting skipped.
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/time_integration.rst:1013: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
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dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 118 warnings.

The HTML pages are in docs.
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual && /usr/bin/cmake -E echo Generated\ HTML\ docs\ in\ file:///builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/docs/index.html
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/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles 0

+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/mpich/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval 'unset LD_LIBRARY_PATH;
unset MPI_COMPILER;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset MPI_PYTHON_SITEARCH;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_FORTRAN_MOD_DIR;
unset MPI_HOME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SYSCONFIG;
unset MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_PYTHON2_SITEARCH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_PYTHON2_SITEARCH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ for mpi in mpich openmpi
+ '[' openmpi = mpich ']'
+ '[' openmpi = openmpi ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64; export MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH;
MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/openmpi-x86_64; export MPI_MAN;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi; export MPI_PYTHON3_SITEARCH;
MPI_HOME=/usr/lib64/openmpi; export MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR;
__MODULES_LMALTNAME=mpi/openmpi-x86_64\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME;
__MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SUFFIX=_openmpi; export MPI_SUFFIX;
MPI_SYSCONFIG=/etc/openmpi-x86_64; export MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN;
test 0;'
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest'
++ export __MODULES_LMALTNAME
++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export OMPI_MCA_rmaps_base_oversubscribe=1
+ OMPI_MCA_rmaps_base_oversubscribe=1
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=mpicc
+ export CC
+ CXX=mpicxx
+ export CXX
+ /usr/bin/cmake -S . -B build_openmpi -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBOUT_USE_FFTW=ON -DBOUT_USE_NETCDF=ON -DBOUT_USE_SCOREP=OFF -DBOUT_USE_SYSTEM_MPARK_VARIANT=ON -DBOUT_USE_LAPACK=ON -DBOUT_USE_NLS=ON -DBOUT_USE_SYSTEM_FMT=ON -DBOUT_USE_UUID_SYSTEM_GENERATOR=ON -DCMAKE_INSTALL_PREFIX=/ -DCMAKE_INSTALL_LIBDIR=/usr/lib64/openmpi/lib -DCMAKE_INSTALL_BINDIR=/usr/lib64/openmpi/bin -DCMAKE_INSTALL_INCLUDEDIR=/usr/include/openmpi-x86_64/bout++/ -DCMAKE_INSTALL_DATAROOTDIR=/usr/share -DCMAKE_INSTALL_PYTHON_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi -DBOUT_BUILD_DOCS=ON -DBOUT_USE_PETSC=ON -DBOUT_USE_SUNDIALS=ON
-- The CXX compiler identification is GNU 13.2.1
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/lib64/openmpi/bin/mpicxx - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Configuring BOUT++ version 5.0.0
-- Found Python3: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter 
-- Could NOT find ClangFormat (missing: ClangFormat_BIN) 
Traceback (most recent call last):
  File "<string>", line 1, in <module>
ModuleNotFoundError: No module named 'zoidberg'
CMake Warning (dev) at CMakeLists.txt:373 (message):
  'src/field/generated_fieldops.cxx' will not be regenerated when you make
  changes to either 'src/field/gen_fieldops.py' or
  'src/field/gen_fieldops.jinja'.  This is because either Python3 or
  clang-format is missing (see above messages for more information) or
  BOUT_GENERATE_FIELDOPS is OFF (current value: OFF).  This warning is only
  important for BOUT++ developers and can otherwise be safely ignored.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Python: /usr/bin/python3.12 (found suitable version "3.12.0", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed 
-- Found Numpy: /usr/include (found version "1.26.0") 
-- Found Cython: TRUE (found version "3.0.2") 
-- Found Bash: /usr/bin/bash (found version "5.2.15") 
-- Building BOUT++ Python interface
-- Found MPI_CXX: /usr/lib64/openmpi/bin/mpicxx (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Enable OpenMP: OFF
-- HYPRE support: OFF
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.9.5") 
-- Checking for one of the modules 'PETSc>3.4.0;petsc>3.4.0'
-- Found PETSc: /usr/include/openmpi-x86_64/petsc  
-- PETSc support: ON
-- Using external mpark.variant
-- Using external fmt
-- PVODE support: ON
-- Found netCDF: /usr/lib64/libnetcdf.so (found version "4.9.0") 
-- Found netCDFCxx version 4.3.1
-- Found netCDFCxx: /usr/lib64/libnetcdf_c++4.so (found version "4.3.1") 
-- NetCDF support: ON
-- Found FFTW: /usr/lib64/libfftw3.so  
-- FFTW support: ON
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE  
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/lib64/libflexiblas.so  
-- Looking for cheev_
-- Looking for cheev_ - found
-- Found LAPACK: /usr/lib64/libflexiblas.so;-lm;-ldl  
-- LAPACK support: ON
-- SLEPc support: OFF
-- SUNDIALS support: ON
-- Found Gettext: /usr/bin/msgmerge (found version "0.22") 
-- Found Intl: built in to C library  
-- libuuid not found, using fallback UUID generator
-- UUID_SYSTEM_GENERATOR: FALSE
-- Enable coverage: OFF
-- Git revision: Unknown
-- Performing Test HAS_FLAG__Wnull_dereference
-- Performing Test HAS_FLAG__Wnull_dereference - Success
-- Warning flag is supported by compiler: -Wnull-dereference
-- Found negative flag: -Wno-cast-function-type
   replaced with -Wcast-function-type
-- Performing Test HAS_FLAG__Wno_cast_function_type
-- Performing Test HAS_FLAG__Wno_cast_function_type - Success
-- Warning flag is supported by compiler: -Wno-cast-function-type
-- Runtime checking level: CHECK=2
-- Message stack: BOUT_USE_MSGSTACK=ON
-- Extra debug output: BOUT_USE_OUTPUT_DEBUG=OFF
-- Signal handling: BOUT_USE_SIGNAL=ON
-- Output coloring: BOUT_USE_COLOR=ON
-- Field name tracking: BOUT_USE_TRACK=ON
-- Signalling floating point exceptions: BOUT_USE_SIGFPE=OFF
-- Enable backtrace: BOUT_USE_BACKTRACE=ON
-- Performing Test HAS_PRETTY_FUNCTION
-- Performing Test HAS_PRETTY_FUNCTION - Success
-- Setting build type to 'RelWithDebInfo' as none was specified.
CMake Deprecation Warning at externalpackages/googletest/CMakeLists.txt:4 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- The C compiler identification is GNU 13.2.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/lib64/openmpi/bin/mpicc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
CMake Deprecation Warning at externalpackages/googletest/googlemock/CMakeLists.txt:45 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


CMake Deprecation Warning at externalpackages/googletest/googletest/CMakeLists.txt:56 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Found Python: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter 
-- Not building test test-laplace-hypre3d, requirement not met: BOUT_HAS_HYPRE
-- Not building test test-laplacexy2-hypre, requirement not met: BOUT_HAS_HYPRE
-- Not building test test-slepc-solver, requirement not met: BOUT_HAS_SLEPC
-- Not building test MMS-advection-arakawa, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-central, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-upwind, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-weno3, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-diffusion2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-hw, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-laplace, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-advection, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-d2dx2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-d2dz2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-diffusion, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-fci, requirement not met: zoidberg_FOUND
-- Not building test MMS-time, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-time-petsc, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building example test_laplacexy_hypre, requirement not met: BOUT_HAS_HYPRE
-- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot 
-- Found Sphinx: /usr/bin/sphinx-build  

   --------------------------------
     BOUT++ Configuration Summary
   --------------------------------

   Bundled PVODE support    : ON
   PETSc support            : ON
   SLEPc support            : OFF
   SUNDIALS support         : ON
   HYPRE support            : OFF
   NetCDF support           : ON
   FFTW support             : ON
   LAPACK support           : ON
   OpenMP support           : OFF
   Natural language support : ON
   ScoreP support           : OFF
   System UUID generator    : FALSE
   Extra debug output       : OFF
   Runtime error check level: 2
   Signal handling          : ON
   Output coloring          : ON
   Field name tracking      : ON
   Floating point exceptions: OFF
   Backtrace enabled        : ON
   RAJA enabled             : OFF
   Umpire enabled           : OFF
   Caliper enabled          : OFF
   CUDA enabled             : OFF
   Metric type              : 2D
   Python API support       : ON
   Sanitizers enabled       : None

   === Python ===

   Make sure that the tools/pylib directory is in your PYTHONPATH
   e.g. by adding to your ~/.bashrc file

       export PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib:/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib:$PYTHONPATH

*** Now run `cmake --build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi` to compile BOUT++ ***

-- Configuring done (5.6s)
-- Generating done (0.2s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    CMAKE_INSTALL_DO_STRIP
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    LIB_SUFFIX
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR


-- Build files have been written to: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi
+ /usr/bin/cmake --build build_openmpi -j2 --verbose
Change Dir: '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'

Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j2
/usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi//CMakeFiles/progress.marks
/usr/bin/gmake  -f CMakeFiles/Makefile2 all
gmake[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -MF CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o.d -o CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/pvbbdpre.cpp
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o -MF CMakeFiles/pvode.dir/source/cvode.cpp.o.d -o CMakeFiles/pvode.dir/source/cvode.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘void* pvode::CVodeMalloc(integer, RhsFn, real, N_Vector, int, int, int, real*, void*, void*, FILE*, int, long int*, real*, void*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:178:25: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘pvode::integer’ {aka ‘int’} [-Wformat=]
  178 | #define CVM             "CVodeMalloc-- "
      |                         ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:182:19: note: in expansion of macro ‘CVM’
  182 | #define MSG_BAD_N CVM "N=%ld < 1 illegal.\n\n"
      |                   ^~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:496:17: note: in expansion of macro ‘MSG_BAD_N’
  496 |     fprintf(fp, MSG_BAD_N, N);
      |                 ^~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:182:28: note: format string is defined here
  182 | #define MSG_BAD_N CVM "N=%ld < 1 illegal.\n\n"
      |                          ~~^
      |                            |
      |                            long int
      |                          %d
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o -MF CMakeFiles/pvpre.dir/precon/band.cpp.o.d -o CMakeFiles/pvpre.dir/precon/band.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp
In function ‘pvode::CVnlsFunctional(pvode::CVodeMemRec*)’,
    inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1826:45,
    inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1358:18,
    inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:882:19:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1876:49: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized]
 1876 |     if ((m==maxcor) || ((m >= 2) && (del > RDIV * delp)))
      |                                                 ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1843:13: note: ‘delp’ was declared here
 1843 |   real del, delp, dcon;
      |             ^~~~
In function ‘pvode::CVNewtonIteration(pvode::CVodeMemRec*)’,
    inlined from ‘pvode::CVnlsNewton(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1944:28,
    inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1827:41,
    inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1358:18,
    inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:882:19:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:2021:50: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized]
 2021 |     if ((m == maxcor) || ((m >= 2) && (del > RDIV*delp))) {
      |                                                  ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1971:13: note: ‘delp’ was declared here
 1971 |   real del, delp, dcon;
      |             ^~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp: In function ‘pvode::integer pvode::gbfa(real**, integer, integer, integer, integer, integer*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp:189:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  189 |     if (swap = (l != k)) {
      |         ~~~~~^~~~~~~~~~
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o -MF CMakeFiles/pvode.dir/source/nvector.cpp.o.d -o CMakeFiles/pvode.dir/source/nvector.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:429: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  429 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:485: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  485 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:543: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  543 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:565: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  565 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:583: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  583 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:698: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  698 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:714: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  714 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:730: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  730 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:745: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  745 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:761: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  761 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:777: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  777 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  793 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:809: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  809 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:824: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  824 |     #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:831: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  831 |     #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:837: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  837 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:850: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  850 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp: In function ‘void pvode::N_VLinearSum(real, N_Vector, real, N_Vector, N_Vector)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:189:12: warning: unused variable ‘v’ [-Wunused-variable]
  189 |   N_Vector v, v1, v2;
      |            ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp: In function ‘pvode::real pvode::N_VWL2Norm(N_Vector, N_Vector)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:533:14: warning: variable ‘N_global’ set but not used [-Wunused-but-set-variable]
  533 |   integer N, N_global;
      |              ^~~~~~~~
[  0%] Linking CXX shared library ../../lib/libpvpre.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvpre.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvpre.so.1.0.0 -o ../../lib/libpvpre.so.1.0.0 CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o CMakeFiles/pvpre.dir/precon/band.cpp.o 
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o -MF CMakeFiles/pvode.dir/source/llnlmath.cpp.o.d -o CMakeFiles/pvode.dir/source/llnlmath.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/llnlmath.cpp
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so
[  2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -MF CMakeFiles/pvode.dir/source/cvspgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvspgmr.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
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/usr/bin/gmake  -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/depend
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/mofiles.dir/DependInfo.cmake "--color="
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/usr/bin/gmake  -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[  2%] Generating locale/es/libbout.gmo, _mo_file_es
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/es/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/es/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/es/libbout.po
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/de/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/de/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/de/libbout.po
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/fr/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/fr/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/fr/libbout.po
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/zh_CN/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/zh_CN/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/zh_CN/libbout.po
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[  8%] Built target mofiles
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o -MF CMakeFiles/pvode.dir/source/spgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/spgmr.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp: In function ‘int pvode::SpgmrSolve(SpgmrMem, void*, N_Vector, N_Vector, int, int, real, int, void*, N_Vector, N_Vector, ATimesFn, PSolveFn, real*, int*, int*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:159:8: warning: unused variable ‘s_r0_norm’ [-Wunused-variable]
  159 |   real s_r0_norm, beta, rotation_product, r_norm, s_product, rho;
      |        ^~~~~~~~~
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o -MF CMakeFiles/pvode.dir/source/iterativ.cpp.o.d -o CMakeFiles/pvode.dir/source/iterativ.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/iterativ.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:328:17: warning: ‘krydim’ may be used uninitialized [-Wmaybe-uninitialized]
  328 |     for (i=1; i <= krydim; i++) yg[i]=ZERO;
      |               ~~^~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:161:36: note: ‘krydim’ was declared here
  161 |   int i, j, k, l, l_plus_1, l_max, krydim, ier, ntries;
      |                                    ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:386:3: warning: ‘rho’ may be used uninitialized [-Wmaybe-uninitialized]
  386 |   if (rho < beta) {
      |   ^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:159:62: note: ‘rho’ was declared here
  159 |   real s_r0_norm, beta, rotation_product, r_norm, s_product, rho;
      |                                                              ^~~
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o -MF CMakeFiles/pvode.dir/source/cvdiag.cpp.o.d -o CMakeFiles/pvode.dir/source/cvdiag.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvdiag.cpp
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o -MF CMakeFiles/pvode.dir/source/smalldense.cpp.o.d -o CMakeFiles/pvode.dir/source/smalldense.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp: In function ‘pvode::integer pvode::gefa(real**, integer, integer*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp:82:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
   82 |     if (swap = (l != k)) {
      |         ~~~~~^~~~~~~~~~
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvode.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvode.so.1.0.0 -o ../../lib/libpvode.so.1.0.0 CMakeFiles/pvode.dir/source/cvode.cpp.o CMakeFiles/pvode.dir/source/nvector.cpp.o CMakeFiles/pvode.dir/source/llnlmath.cpp.o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o CMakeFiles/pvode.dir/source/spgmr.cpp.o CMakeFiles/pvode.dir/source/iterativ.cpp.o CMakeFiles/pvode.dir/source/cvdiag.cpp.o CMakeFiles/pvode.dir/source/smalldense.cpp.o 
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
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/usr/bin/gmake  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
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/usr/bin/cmake -P /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/cmake/GenerateDateTimeFile.cmake
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
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gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/bout++.cxx.o -MF CMakeFiles/bout++.dir/src/bout++.cxx.o.d -o CMakeFiles/bout++.dir/src/bout++.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/bout++.cxx
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field.cxx.o -MF CMakeFiles/bout++.dir/src/field/field.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field2d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field2d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field2d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field2d.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field3d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field3d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field3d.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field_data.cxx.o -MF CMakeFiles/bout++.dir/src/field/field_data.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field_data.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field_data.cxx
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[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o
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[ 20%] Building CXX object CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o -MF CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o.d -o CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/generated_fieldops.cxx
[ 20%] Building CXX object CMakeFiles/bout++.dir/src/field/globalfield.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/globalfield.cxx.o -MF CMakeFiles/bout++.dir/src/field/globalfield.cxx.o.d -o CMakeFiles/bout++.dir/src/field/globalfield.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/globalfield.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/initialprofiles.cxx.o -MF CMakeFiles/bout++.dir/src/field/initialprofiles.cxx.o.d -o CMakeFiles/bout++.dir/src/field/initialprofiles.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/initialprofiles.cxx
[ 20%] Building CXX object CMakeFiles/bout++.dir/src/field/vecops.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/vecops.cxx.o -MF CMakeFiles/bout++.dir/src/field/vecops.cxx.o.d -o CMakeFiles/bout++.dir/src/field/vecops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/vecops.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/vector2d.cxx.o -MF CMakeFiles/bout++.dir/src/field/vector2d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/vector2d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/vector2d.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/vector3d.cxx.o -MF CMakeFiles/bout++.dir/src/field/vector3d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/vector3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/vector3d.cxx
[ 23%] Building CXX object CMakeFiles/bout++.dir/src/field/where.cxx.o
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[ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexy/laplacexy.cxx.o
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[ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2.cxx
[ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2_hypre.cxx
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2_hypre.cxx:1:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invert/laplacexy2_hypre.hxx:41:2: warning: #warning LaplaceXY requires Hypre. No LaplaceXY available [-Wcpp]
   41 | #warning LaplaceXY requires Hypre. No LaplaceXY available
      |  ^~~~~~~
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/parderiv/impls/cyclic/cyclic.cxx
[ 41%] Building CXX object CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o -MF CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/parderiv/invert_parderiv.cxx
[ 41%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_factory.cxx
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_region.cxx
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In function ‘void verifyNumPoints(BoundaryRegion*, int)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:80:21: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
   80 |     if (mesh->firstY()) {
      |         ~~~~~~~~~~~~^~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field_factory.hxx:32,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_standard.hxx:9,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:1:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:83:20: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
   83 |     if (mesh->lastY()) {
      |         ~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:473:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  473 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  474 |                                t);
      |                                ~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field_data.hxx:51,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field.hxx:39,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_op.hxx:9,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_standard.hxx:6:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:517:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  517 |               val = fg->generate(xnorm, TWOPI * ynorm,
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
  518 |                                  TWOPI * (zk - 0.5) / (mesh->LocalNz), t);
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O3::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:978:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  978 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  979 |                                t);
      |                                ~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O4::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:1444:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
 1444 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1445 |                                t);
      |                                ~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:2152:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
 2152 |               val = fg->generate(xnorm, TWOPI * ynorm,
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
 2153 |                                  TWOPI * (zk - 0.5) / (mesh->LocalNz), t);
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/coordinates.cxx
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/coordinates_accessor.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/data/gridfromfile.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/data/gridfromoptions.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/difops.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/difops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/difops.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx: In function ‘FV::communicateFluxes(Field3D&)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx:517:15: warning: ‘xout’ may be used uninitialized [-Wmaybe-uninitialized]
  517 |     mesh->wait(xout);
      |     ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx:488:20: note: ‘xout’ was declared here
  488 |   comm_handle xin, xout;
      |                    ^~~~
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/index_derivs.cxx
In file included from /usr/include/c++/13/bits/shared_ptr.h:53,
                 from /usr/include/c++/13/memory:80,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field.hxx:36,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/options.hxx:43,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/deriv_store.hxx:42,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:48,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.hxx:8,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:36:
In member function ‘std::__shared_ptr<ArrayData<double>, (__gnu_cxx::_Lock_policy)2>::operator bool() const’,
    inlined from ‘std::operator==<ArrayData<double> >(std::shared_ptr<ArrayData<double> > const&, decltype(nullptr))bool’ at /usr/include/c++/13/bits/shared_ptr.h:562:14,
    inlined from ‘Array<double, ArrayData<double> >::empty() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/array.hxx:270:44,
    inlined from ‘Field3D::isAllocated() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field3d.hxx:203:48,
    inlined from ‘BoutMesh::pack_data(std::vector<FieldData*, std::allocator<FieldData*> > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:2262:7:
/usr/include/c++/13/bits/shared_ptr_base.h:1670:16: warning: potential null pointer dereference [-Wnull-dereference]
 1670 |       { return _M_ptr != nullptr; }
      |                ^~~~~~
In member function ‘std::__shared_ptr<ArrayData<double>, (__gnu_cxx::_Lock_policy)2>::operator bool() const’,
    inlined from ‘std::operator==<ArrayData<double> >(std::shared_ptr<ArrayData<double> > const&, decltype(nullptr))bool’ at /usr/include/c++/13/bits/shared_ptr.h:562:14,
    inlined from ‘Array<double, ArrayData<double> >::empty() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/array.hxx:270:44,
    inlined from ‘Field2D::isAllocated() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:106:48,
    inlined from ‘BoutMesh::pack_data(std::vector<FieldData*, std::allocator<FieldData*> > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:2273:7:
/usr/include/c++/13/bits/shared_ptr_base.h:1670:16: warning: potential null pointer dereference [-Wnull-dereference]
 1670 |       { return _M_ptr != nullptr; }
      |                ^~~~~~
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation_xz.cxx
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/hermite_spline_z.cxx
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[ 55%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o
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[ 55%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o
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[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o
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[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetricinterp.cxx.o
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[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel_boundary_op.cxx.o
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/parallel_boundary_region.cxx
[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/surfaceiter.cxx
[ 61%] Building CXX object CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o -MF CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/gyro_average.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o -MF CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/physicsmodel.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o -MF CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/smoothing.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/snb.cxx.o -MF CMakeFiles/bout++.dir/src/physics/snb.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/snb.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/snb.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o -MF CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/sourcex.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/adams_bashforth/adams_bashforth.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/arkode/arkode.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx: In member function ‘virtual int CvodeSolver::init()’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:378:33: warning: ‘int CVSpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use CVodeSetLinearSolver instead [-Wdeprecated-declarations]
  378 |       if (CVSpilsSetLinearSolver(cvode_mem, sun_solver) != CV_SUCCESS) {
      |           ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:49:
/usr/include/openmpi-x86_64/cvode/cvode_spils.h:43:5: note: declared here
   43 | int CVSpilsSetLinearSolver(void *cvode_mem, SUNLinearSolver LS);
      |     ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:416:37: warning: ‘int CVSpilsSetPreconditioner(void*, CVSpilsPrecSetupFn, CVSpilsPrecSolveFn)’ is deprecated: use CVodeSetPreconditioner instead [-Wdeprecated-declarations]
  416 |         if (CVSpilsSetPreconditioner(cvode_mem, nullptr, cvode_pre_shim)) {
      |             ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openmpi-x86_64/cvode/cvode_spils.h:49:5: note: declared here
   49 | int CVSpilsSetPreconditioner(void *cvode_mem, CVSpilsPrecSetupFn pset,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:428:33: warning: ‘int CVSpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use CVodeSetLinearSolver instead [-Wdeprecated-declarations]
  428 |       if (CVSpilsSetLinearSolver(cvode_mem, sun_solver) != CV_SUCCESS) {
      |           ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openmpi-x86_64/cvode/cvode_spils.h:43:5: note: declared here
   43 | int CVSpilsSetLinearSolver(void *cvode_mem, SUNLinearSolver LS);
      |     ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:442:29: warning: ‘int CVSpilsSetJacTimes(void*, CVSpilsJacTimesSetupFn, CVSpilsJacTimesVecFn)’ is deprecated: use CVodeSetJacTimes instead [-Wdeprecated-declarations]
  442 |       if (CVSpilsSetJacTimes(cvode_mem, nullptr, cvode_jac) != CV_SUCCESS) {
      |           ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openmpi-x86_64/cvode/cvode_spils.h:53:5: note: declared here
   53 | int CVSpilsSetJacTimes(void *cvode_mem, CVSpilsJacTimesSetupFn jtsetup,
      |     ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx: In member function ‘virtual int CvodeSolver::run()’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:533:28: warning: ‘int CVSpilsGetNumPrecSolves(void*, long int*)’ is deprecated: use CVodeGetNumPrecSolves instead [-Wdeprecated-declarations]
  533 |     CVSpilsGetNumPrecSolves(cvode_mem, &temp_long_int);
      |     ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openmpi-x86_64/cvode/cvode_spils.h:64:5: note: declared here
   64 | int CVSpilsGetNumPrecSolves(void *cvode_mem, long int *npsolves);
      |     ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:535:26: warning: ‘int CVSpilsGetNumLinIters(void*, long int*)’ is deprecated: use CVodeGetNumLinIters instead [-Wdeprecated-declarations]
  535 |     CVSpilsGetNumLinIters(cvode_mem, &temp_long_int);
      |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openmpi-x86_64/cvode/cvode_spils.h:67:5: note: declared here
   67 | int CVSpilsGetNumLinIters(void *cvode_mem, long int *nliters);
      |     ^~~~~~~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/euler/euler.cxx
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx:679:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  679 |           PETSC_NULL,
      |             ^~~~~~~~~                                                                 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx:681:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  681 |           PETSC_NULL, &Jmf);
      |             ^~~~~~~~~~~~~~~~                                                          
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx: In member function ‘virtual int IdaSolver::init()’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:199:30: warning: ‘int IDASpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use IDASetLinearSolver instead [-Wdeprecated-declarations]
  199 |   if (IDASpilsSetLinearSolver(idamem, sun_solver) != IDA_SUCCESS) {
      |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:45:
/usr/include/openmpi-x86_64/ida/ida_spils.h:44:5: note: declared here
   44 | int IDASpilsSetLinearSolver(void *ida_mem, SUNLinearSolver LS);
      |     ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:234:36: warning: ‘int IDASpilsSetPreconditioner(void*, IDASpilsPrecSetupFn, IDASpilsPrecSolveFn)’ is deprecated: use IDASetPreconditioner instead [-Wdeprecated-declarations]
  234 |       if (IDASpilsSetPreconditioner(idamem, nullptr, ida_pre_shim)) {
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openmpi-x86_64/ida/ida_spils.h:47:5: note: declared here
   47 | int IDASpilsSetPreconditioner(void *ida_mem, IDASpilsPrecSetupFn pset,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:264:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  264 |   ierr = PetscOptionsGetBool(PETSC_NULL, PETSC_NULL, "-interpolate", &interpolate,
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~    
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:264:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:265:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  265 |                              PETSC_NULL);
      |             ^                ~~~~~~~~~~~~                                             
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:276:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  276 |   ierr = PetscOptionsGetString(PETSC_NULL, PETSC_NULL, "-output_name", this->output_name,
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:276:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:287:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  287 |     ierr = SNESMonitorSet(snes, PetscSNESMonitor, this, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                  
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:290:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  290 |     ierr = TSMonitorSet(ts, PetscMonitor, this, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                          
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:402:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  402 |   ierr = PetscOptionsGetString(PETSC_NULL, PETSC_NULL, "-J_load", load_file,
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~          
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:402:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:454:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  454 |     ierr = MatSeqAIJSetPreallocation(J, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                        
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:456:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  456 |     ierr = MatMPIAIJSetPreallocation(J, prealloc, PETSC_NULL, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:456:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:461:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  461 |     ierr = MatSeqBAIJSetPreallocation(J, dof, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                  
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:463:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  463 |     ierr = MatMPIBAIJSetPreallocation(J, dof, prealloc, PETSC_NULL, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:463:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:466:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  466 |     ierr = PetscOptionsHasName(PETSC_NULL, PETSC_NULL, "-J_slowfd", &J_slowfd);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~       
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:466:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:473:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  473 |       ierr = SNESSetJacobian(snes, J, J, SNESComputeJacobianDefault, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~     
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:527:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  527 |   ierr = PetscOptionsHasName(PETSC_NULL, PETSC_NULL, "-J_write", &J_write);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~           
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:527:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:879:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  879 |   ierr = SNESGetJacobian(snes, &A, &B, PETSC_NULL, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                       
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:879:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:893:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  893 |   ierr = SNESGetFunction(snes, &F, PETSC_NULL, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:893:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:916:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  916 |   ierr = SNESGetFunction(snes, &func, PETSC_NULL, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                        
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:916:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
[ 70%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/power/power.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/split-rk/split-rk.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx:567:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  567 |           PETSC_NULL,
      |             ^~~~~~~~~                                                                 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx:569:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  569 |           PETSC_NULL, &Jmf);
      |             ^~~~~~~~~~~~~~~~                                                          
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/solver/solver.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/solver.cxx.o -MF CMakeFiles/bout++.dir/src/solver/solver.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/solver.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/solver.cxx
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o -MF CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/bout_types.cxx
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/boutcomm.cxx
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/boutexception.cxx
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/derivs.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -MF CMakeFiles/bout++.dir/src/sys/derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/derivs.cxx
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -MF CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx: In member function ‘virtual double FieldGenerator::generate(const bout::generator::Context&)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx:43:18: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
   43 |   return generate(ctx.x(), ctx.y(), ctx.z(), ctx.t());
      |          ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx:25:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -MF CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/generator_context.cxx
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/hyprelib.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -MF CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/msg_stack.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_ini.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_netcdf.cxx
In file included from /usr/include/openmpi-x86_64/ncFile.h:2,
                 from /usr/include/openmpi-x86_64/netcdf:16,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_netcdf.cxx:14:
/usr/include/openmpi-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -MF CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/optionsreader.cxx
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/output.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/output.cxx.o -MF CMakeFiles/bout++.dir/src/sys/output.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/output.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/output.cxx
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/petsclib.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/petsclib.cxx:29:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
   29 |       PetscInitialize(pargc, pargv, PETSC_NULL, help);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/range.cxx.o
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CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o CMakeFiles/bout++.dir/src/sys/output.cxx.o CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o CMakeFiles/bout++.dir/src/sys/range.cxx.o CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o CMakeFiles/bout++.dir/src/sys/timer.cxx.o CMakeFiles/bout++.dir/src/sys/type_name.cxx.o CMakeFiles/bout++.dir/src/sys/utils.cxx.o "CMakeFiles/bout++.dir/bout++-time.cxx.o"  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib: /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/libfmt.so.10.0.0 lib/libpvode.so.1.0.0 lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl -ldl /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libnetcdf.so /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/spt/spt.cxx: In member function ‘__ct_base ’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/spt/spt.cxx:68:37: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
   68 |   alldata = new SPT_data[ye - ys + 1];
      |                                     ^
/usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here
  128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc)
      |                          ^
/usr/bin/cmake -E cmake_symlink_library lib/libbout++.so.5.0.0 lib/libbout++.so.5.0.0 lib/libbout++.so
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 94%] Built target bout++
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 97%] Generating boutcpp.pxd
[ 97%] Generating resolve_enum.pxd
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py resolve_enum.pxd.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/resolve_enum.pxd
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py boutcpp.pxd.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/boutcpp.pxd
[ 97%] Generating boutpp.pyx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build
[100%] Generating helper.cxx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py boutpp.pyx.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/boutpp.pyx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py helper.cxx.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/helper.cxx
[100%] Generating helper.h
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py helper.h.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/helper.h
[100%] Cythonizing python interface
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy boutpp.pyx libboutpp.pyx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/python3.12 -m cython libboutpp.pyx --cplus -3 -X binding=True -X embedsignature=True
warning: resolve_enum.pxd:49:21: 'deflt' redeclared 
warning: resolve_enum.pxd:189:24: 'Standard' redeclared 
warning: resolve_enum.pxd:223:15: 'Standard' redeclared 
warning: bout_options.pxd:22:21: Rvalue-reference as function argument not supported
warning: bout_options.pxd:24:32: Rvalue-reference as function argument not supported
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o
[100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o -MF CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o.d -o CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o -MF CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o.d -o CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/helper.cxx
In file included from /usr/include/numpy/ndarraytypes.h:1929,
                 from /usr/include/numpy/ndarrayobject.h:12,
                 from /usr/include/numpy/arrayobject.h:5,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:1195:
/usr/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
[100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -MF CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o.d -o CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/boutexception_helper.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:40860:46: warning: ‘__pyx_obj_9libboutpp_Vector2D* __pyx_f_9libboutpp_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function]
40860 | static struct __pyx_obj_9libboutpp_Vector2D *__pyx_f_9libboutpp_v2dFromObj(Vector2D __pyx_v_i) {
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_f_12resolve_enum_resolve_cell_loc(_object*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:9195:10: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized]
 9195 |   return __pyx_r;
      |          ^~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:8838:12: note: ‘__pyx_r’ was declared here
 8838 |   CELL_LOC __pyx_r;
      |            ^~~~~~~
In function ‘__pyx_pf_9libboutpp_48bracket(_object*, __pyx_obj_9libboutpp_Field3D*, __pyx_obj_9libboutpp_Field3D*, _object*, _object*)’,
    inlined from ‘__pyx_pw_9libboutpp_49bracket(_object*, _object* const*, long, _object*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:63918:42:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:64012:65: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized]
64012 |   __pyx_t_1 = ((PyObject *)__pyx_f_9libboutpp_f3dFromObj(bracket((__pyx_v_a->cobj[0]), (__pyx_v_b->cobj[0]), __pyx_v_method_, __pyx_v_outloc_))); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 2901, __pyx_L1_error)
      |                                                          ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_pw_9libboutpp_49bracket(_object*, _object* const*, long, _object*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:10706:18: note: ‘__pyx_r’ was declared here
10706 |   BRACKET_METHOD __pyx_r;
      |                  ^~~~~~~
[100%] Linking CXX shared library libboutpp.cpython-312-x86_64-linux-gnu.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E cmake_link_script CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libboutpp.cpython-312-x86_64-linux-gnu.so -o libboutpp.cpython-312-x86_64-linux-gnu.so "CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o" "CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o" "CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o"  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib: ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color="
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[100%] Building python interface
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpython-312-x86_64-linux-gnu.so /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py
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+ /usr/bin/cmake --build build_openmpi/manual -j2 --verbose
Change Dir: '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual'

Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j2
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual//CMakeFiles/progress.marks
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/gmake  -f CMakeFiles/Makefile2 manual/all
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/usr/bin/gmake  -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/depend
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual/CMakeFiles/sphinx-html.dir/DependInfo.cmake "--color="
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[100%] Generating HTML documentation with Sphinx in /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual/docs
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual && /usr/bin/sphinx-build -b html /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual/docs
Running Sphinx v7.1.2
WARNING: Invalid configuration value found: 'language = None'. Update your configuration to a valid language code. Falling back to 'en' (English).
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making output directory... done
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reading sources... [100%] user_docs/variable_init
looking for now-outdated files... /usr/lib/python3.12/site-packages/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them
WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised:
No module named 'enthought'
/usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:5: ERROR: Unexpected indentation.
/usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:6: WARNING: Block quote ends without a blank line; unexpected unindent.
/usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:56: WARNING: Footnote [1] is not referenced.
WARNING: autodoc: failed to import module 'boutpp'; the following exception was raised:
No module named 'boutpp'
WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised:
No module named 'crosslines'
WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised:
No module named 'tvtk'
WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised:
No module named 'tvtk'
/usr/lib/python3.12/site-packages/boututils/calculus.py:docstring of boututils.calculus.deriv2D:14: ERROR: Unexpected indentation.
WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'boundary' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'field' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'fieldtracer' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'grid' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'plot' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'poloidal_grid' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'progress' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'rzline' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'zoidberg' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/file_io.rst:114: ERROR: Unknown interpreted text role "py".
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/boundary_options.rst:120: WARNING: Footnote [#] is not referenced.
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:447: WARNING: Title underline too short.

Working with an active ``conda`` environment
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:453: ERROR: Unexpected indentation.
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:454: WARNING: Block quote ends without a blank line; unexpected unindent.
/usr/lib/python3.12/site-packages/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :noindex: for one of them
/usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :noindex: for one of them
/usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata.collect.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :noindex: for one of them
/usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata.collect.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/running_bout.rst:463: WARNING: Literal block expected; none found.
none found
pickling environment... done
checking consistency... done
preparing documents... WARNING: unsupported theme option 'repository_url' given
done
copying assets... WARNING: unsupported theme option 'path_to_docs' given
WARNING: unsupported theme option 'use_edit_page_button' given
WARNING: unsupported theme option 'use_repository_button' given
WARNING: unsupported theme option 'use_issues_button' given
WARNING: unsupported theme option 'home_page_in_toc' given
copying static files... done
copying extra files... done
done
writing output... [100%] user_docs/variable_init
/usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator.normal'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 5]
    numpy.random.Generator.normal
    -----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5]
      numpy.random.Generator.normal
      -----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator.normal
        -----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator.normal
        -----^

/usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: Unparseable C++ cross-reference: 'numpy.random.Generator'
Error in cross-reference.
If shorthand ref:
  Invalid C++ declaration: Expected end of definition. [error at 5]
    numpy.random.Generator
    -----^
If full function ref:
  Error when parsing function declaration.
  If the function has no return type:
    Error in declarator or parameters-and-qualifiers
    Invalid C++ declaration: Expecting "(" in parameters-and-qualifiers. [error at 5]
      numpy.random.Generator
      -----^
  If the function has a return type:
    Error in declarator or parameters-and-qualifiers
    If pointer to member declarator:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator
        -----^
    If declarator-id:
      Invalid C++ declaration: Expected identifier in nested name. [error at 5]
        numpy.random.Generator
        -----^

/usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.normal:14: WARNING: undefined label: 'random-quick-start'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: '../_breathe_autogen/file/field2d_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: '../_breathe_autogen/file/field3d_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: '../_breathe_autogen/file/field__data_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:112: WARNING: unknown document: '../_breathe_autogen/file/initialprofiles_8cxx'
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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:124: WARNING: unknown document: '../_breathe_autogen/file/vector2d_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:129: WARNING: unknown document: '../_breathe_autogen/file/vector3d_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:133: WARNING: unknown document: '../_breathe_autogen/file/where_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft__fftw_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:148: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx'
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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:160: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8hxx'
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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:168: WARNING: unknown document: '../_breathe_autogen/file/spt_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:173: WARNING: unknown document: '../_breathe_autogen/file/invert__parderiv_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:181: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:183: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:187: WARNING: unknown document: '../_breathe_autogen/file/lapack__routines_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:191: WARNING: unknown document: '../_breathe_autogen/file/boundary__factory_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: '../_breathe_autogen/file/boundary__region_8cxx'
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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: '../_breathe_autogen/file/interpolation_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:212: WARNING: unknown document: '../_breathe_autogen/file/mesh_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:220: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:224: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:229: WARNING: unknown document: '../_breathe_autogen/file/gyro__average_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:231: WARNING: unknown document: '../_breathe_autogen/file/smoothing_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: '../_breathe_autogen/file/sourcex_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: '../_breathe_autogen/file/solver_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:247: WARNING: unknown document: '../_breathe_autogen/file/cvode_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:251: WARNING: unknown document: '../_breathe_autogen/file/cvode_8hxx'
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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:263: WARNING: unknown document: '../_breathe_autogen/file/petsc_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:266: WARNING: unknown document: '../_breathe_autogen/file/petsc_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:270: WARNING: unknown document: '../_breathe_autogen/file/pvode_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: '../_breathe_autogen/file/pvode_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:278: WARNING: unknown document: '../_breathe_autogen/file/boutcomm_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:280: WARNING: unknown document: '../_breathe_autogen/file/boutexception_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: '../_breathe_autogen/file/msg__stack_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: '../_breathe_autogen/file/options_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:300: WARNING: unknown document: '../_breathe_autogen/file/optionsreader_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:302: WARNING: unknown document: '../_breathe_autogen/file/output_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:304: WARNING: unknown document: '../_breathe_autogen/file/range_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: '../_breathe_autogen/file/timer_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:312: WARNING: unknown document: '../_breathe_autogen/file/utils_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:318: WARNING: unknown document: '../_breathe_autogen/file/optionparser_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:320: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8cxx'
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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
generating indices... genindex /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field2d_8hxx'
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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/output_and_post.rst:581: WARNING: Could not lex literal_block 'AppendTo[$Path,"/full/path/to/BOUT/tools/mathematicalib"]' as "mathematica". Highlighting skipped.
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py-modindex done
writing additional pages... search done
copying images... [100%] figs/init_balloon.png
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 118 warnings.

The HTML pages are in docs.
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual && /usr/bin/cmake -E echo Generated\ HTML\ docs\ in\ file:///builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual/docs/index.html
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual/CMakeFiles/docs.dir/DependInfo.cmake "--color="
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/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles 0

+ '[' openmpi = mpich ']'
+ '[' openmpi = openmpi ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/openmpi/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval 'unset MPI_COMPILER;
unset LD_LIBRARY_PATH;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_HOME;
unset MPI_FORTRAN_MOD_DIR;
unset __MODULES_LMALTNAME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SUFFIX;
unset MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset MPI_COMPILER
++ unset LD_LIBRARY_PATH
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset __MODULES_LMALTNAME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.QXeemC
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64
++ dirname /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ for mpi in mpich openmpi
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64; export MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64; export MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich; export MPI_PYTHON3_SITEARCH;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich; export MPI_HOME;
__MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SYSCONFIG=/etc/mpich-x86_64; export MPI_SYSCONFIG;
MPI_SUFFIX=_mpich; export MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH;
MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB;
PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN;
test 0;'
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ DESTDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64
+ /usr/bin/cmake --install build_mpich
-- Install configuration: "RelWithDebInfo"
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so
-- Set runtime path of "/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so" to ""
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/python3.12/site-packages/mpich/boutpp/__init__.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/libpvode.so.1.0.0
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/libpvode.so
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/libpvpre.so.1.0.0
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/libpvpre.so
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/nvector.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/vector.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/spgmr.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/smalldense.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/pvbbdpre.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/llnltyps.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/llnlmath.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/iterativ.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/cvspgmr.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/cvode.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/cvdiag.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/band.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/PVODE/PVODETargets.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/PVODE/PVODETargets-relwithdebinfo.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/locale/es/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/locale/de/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/locale/fr/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/locale/zh_CN/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/locale/zh_TW/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/libbout++.so.5.0.0
-- Set runtime path of "/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/libbout++.so.5.0.0" to ""
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/libbout++.so
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/where.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/vector3d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/vector2d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/vecops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/utils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/unused.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/stencils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/sourcex.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/smoothing.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/parallel_boundary_region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/parallel_boundary_op.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/output.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/optionsreader.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/options_netcdf.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/options.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/multiostream.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/msg_stack.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/mask.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/lapack_routines.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/invert_parderiv.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/invert_laplace.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/interpolation_z.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/interpolation_xz.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/interpolation.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/initialprofiles.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/gyro_average.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/globals.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/fieldperp.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/field_factory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/field_data.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/field3d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/field2d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/field.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/fft.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/difops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/derivs.hxx
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/cyclic_reduction.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/boutexception.hxx
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout_types.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/petsclib.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invertable_operator.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/utils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/field.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sundials_backports.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/boutcomm.hxx
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/variant.hxx
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/type_name.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/timer.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/range.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/gettext.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/generator_context.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/expressionparser.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/surfaceiter.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/stencils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sourcex.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/solverfactory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/solver.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/snb.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/smoothing.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/slepclib.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/single_index_ops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/scorepwrapper.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/rvec.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/rkscheme.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/rajalib.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/physicsmodel.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/petsc_interface.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/paralleltransform.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/parallel_boundary_region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/parallel_boundary_op.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/output_bout_types.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/optionsreader.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/options_netcdf.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/options.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/operatorstencil.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/openmpwrap.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/multiostream.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/msg_stack.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/mpi_wrapper.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/monitor.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/mesh.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/mask.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/macro_for_each.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/lapack_routines.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invert_parderiv.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invert_laplace.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invert
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invert/laplacexz.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invert/laplacexy2_hypre.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invert/laplacexy2.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invert/laplacexy.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/interpolation_z.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/interpolation_xz.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/interpolation.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/initialprofiles.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/index_derivs_interface.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/index_derivs.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/hyprelib.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/hypre_interface.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/gyro_average.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/griddata.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/globals.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/globalindexer.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/globalfield.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/generic_factory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/fv_ops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/format.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/fieldperp.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/fieldgroup.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/field_factory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/field_data.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/field_accessor.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/field3d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/field2d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/fft.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/expr.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/difops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/derivs.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/deriv_store.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/dcomplex.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/cyclic_reduction.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/coordinates_accessor.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/coordinates.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/constants.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/caliper_wrapper.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/build_config.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/boutexception.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/bout_types.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/bout_enum_class.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/bout.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/boundary_standard.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/boundary_region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/boundary_op.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/boundary_factory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/assert.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/array.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/boundary_standard.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/boundary_region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/boundary_op.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/boundary_factory.hxx
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/build_defines.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/revision.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/version.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout_4to5
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout_3to4.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-v5-xzinterpolation-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-v5-physics-model-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-v5-macro-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-v5-input-file-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-v5-header-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-v5-format-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-v5-factory-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-stop-script
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-sonnet
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-log-color
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-changelog-generator.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-build-deps.sh
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-boutdata-restart-create
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-archive-helper.sh
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-add-mod-path
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/bin/bout-config
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/bout++Targets.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/bout++Targets-relwithdebinfo.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/bout++Config.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/bout++ConfigVersion.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/BOUT++functions.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/CorrectWindowsPaths.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindClangFormat.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindFFTW.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindHYPRE.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindnetCDF.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindnetCDFCxx.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindPackageMultipass.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindLibuuid.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindPETSc.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindScoreP.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindSLEPc.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindSUNDIALS.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindSphinx.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/ResolveCompilerPaths.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/python3.12/site-packages/mpich/boutconfig/__init__.py
++ grep /libbout
++ find /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/mpich/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/python3.12/site-packages/mpich
/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/mpich/lib/libbout++.so: RUNPATH=:/usr/lib64/mpich/lib
/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/mpich/lib/libbout++.so: new RUNPATH: /usr/lib64/mpich/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout)
+ chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/mpich/lib/libbout++.so
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout)
+ chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/mpich/lib/libbout++.so.5.0.0
/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/mpich/lib/libbout++.so.5.0.0: RUNPATH=/usr/lib64/mpich/lib
/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/mpich/lib/libbout++.so.5.0.0: new RUNPATH: /usr/lib64/mpich/lib
/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so: RUNPATH=:/usr/lib64/mpich/lib
/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so: new RUNPATH: /usr/lib64/mpich/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout)
+ chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so
+ rm -rf /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/bout++
+ mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/modulefiles/bout++
+ cat
+ DESTDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64
+ /usr/bin/cmake --install build_mpich/manual
-- Install configuration: "RelWithDebInfo"
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++/
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//objects.inv
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//searchindex.js
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/init_balloon.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/stagLocations.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/quickstart_conduction_example.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/sod_result.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/interchange_inst_test.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/snb-step.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/snb-sinusoidal.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/par_laplace.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilGlobalIndices.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilMatrix.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilMeshWithStencil.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilMesh.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/poincare.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/elliptic_grid.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/grid_gen.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/boutmesh-comms.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/topology_schematic.svg
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/topology_cross_section.svg
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/diffStencils.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/fluid_norm_mc.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/petsc_vector_set.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/operator_stencil_uml.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/petsc_interface_overview.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/memory.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/layout2.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/layout1.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//search.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//py-modindex.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//genindex.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/variable_init.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/time_integration.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/testing.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/staggered_grids.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/running_bout.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/quickstart.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/python_boutpp.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/python.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/preconditioning.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/physics_models.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/petsc.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/parallel-transforms.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/output_and_post.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/nonlocal.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/new_in_v5.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/makefiles.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/laplacian.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/invertable_operator.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/introduction.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/installing.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/input_grids.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/gpu_support.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/eigenvalue_solver.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/differential_operators.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/coordinates.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/bout_options.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/bout_functions_for_physics.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/boundary_options.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/algebraic_operators.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/advanced_install.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/BOUT_Gradperp_op.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//index.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/petsc_interface.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/performance_profiling.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/natural_language.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/mesh.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/git_basics.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/file_io.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/data_types.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/contributing.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/code_layout.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//api_reference.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/variable_init.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/time_integration.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/testing.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/staggered_grids.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/running_bout.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/quickstart.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/python_boutpp.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/python.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/preconditioning.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/physics_models.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/petsc.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/parallel-transforms.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/output_and_post.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/nonlocal.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/new_in_v5.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/makefiles.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/laplacian.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/invertable_operator.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/introduction.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/installing.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/input_grids.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/gpu_support.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/eigenvalue_solver.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/differential_operators.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/coordinates.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/bout_options.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/bout_functions_for_physics.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/boundary_options.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/algebraic_operators.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/advanced_install.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/BOUT_Gradperp_op.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/index.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/petsc_interface.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/performance_profiling.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/natural_language.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/mesh.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/git_basics.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/file_io.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/data_types.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/contributing.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/code_layout.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/api_reference.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc/zoidberg.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc/boututils.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc/boutpp.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc/boutdata.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_apidoc
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_apidoc/zoidberg.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_apidoc/boututils.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_apidoc/boutpp.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_apidoc/boutdata.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/css/custom.css
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/contents.png
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/doctools.js
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/documentation_options.js
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/sphinx_highlight.js
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/pygments.css
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/mpich/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval 'unset LD_LIBRARY_PATH;
unset MPI_COMPILER;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset MPI_PYTHON_SITEARCH;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_FORTRAN_MOD_DIR;
unset MPI_HOME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SYSCONFIG;
unset MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_PYTHON2_SITEARCH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_PYTHON2_SITEARCH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ for mpi in mpich openmpi
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64; export MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH;
MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/openmpi-x86_64; export MPI_MAN;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi; export MPI_PYTHON3_SITEARCH;
MPI_HOME=/usr/lib64/openmpi; export MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR;
__MODULES_LMALTNAME=mpi/openmpi-x86_64\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME;
__MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SUFFIX=_openmpi; export MPI_SUFFIX;
MPI_SYSCONFIG=/etc/openmpi-x86_64; export MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN;
test 0;'
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest'
++ export __MODULES_LMALTNAME
++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export OMPI_MCA_rmaps_base_oversubscribe=1
+ OMPI_MCA_rmaps_base_oversubscribe=1
+ DESTDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64
+ /usr/bin/cmake --install build_openmpi
-- Install configuration: "RelWithDebInfo"
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/python3.12/site-packages/openmpi/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so
-- Set runtime path of "/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/python3.12/site-packages/openmpi/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so" to ""
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/python3.12/site-packages/openmpi/boutpp/__init__.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/libpvode.so.1.0.0
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/libpvode.so
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/libpvpre.so.1.0.0
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/libpvpre.so
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/nvector.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/vector.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/spgmr.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/smalldense.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/pvbbdpre.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/llnltyps.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/llnlmath.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/iterativ.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/cvspgmr.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/cvode.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/cvdiag.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/band.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/PVODE/PVODETargets.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/PVODE/PVODETargets-relwithdebinfo.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/locale/es/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/locale/de/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/locale/fr/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/locale/zh_CN/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/locale/zh_TW/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/libbout++.so.5.0.0
-- Set runtime path of "/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/libbout++.so.5.0.0" to ""
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/libbout++.so
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/where.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/vector3d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/vector2d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/vecops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/utils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/unused.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/stencils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/sourcex.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/smoothing.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/parallel_boundary_region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/parallel_boundary_op.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/output.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/optionsreader.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/options_netcdf.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/options.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/multiostream.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/msg_stack.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/mask.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/lapack_routines.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/invert_parderiv.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/invert_laplace.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/interpolation_z.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/interpolation_xz.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/interpolation.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/initialprofiles.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/gyro_average.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/globals.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/fieldperp.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/field_factory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/field_data.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/field3d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/field2d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/field.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/fft.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/difops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/derivs.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/dcomplex.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/cyclic_reduction.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/boutexception.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/boutcomm.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout_types.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/petsclib.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/invertable_operator.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/utils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/field.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/sundials_backports.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/boutcomm.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/output.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/where.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/vector3d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/vector2d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/vecops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/unused.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/traits.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/template_combinations.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/sys
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/sys/variant.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/sys/uncopyable.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/sys/type_name.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/sys/timer.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/sys/range.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/sys/gettext.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/sys/generator_context.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/sys/expressionparser.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/surfaceiter.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/stencils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/sourcex.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/solverfactory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/solver.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/snb.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/smoothing.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/slepclib.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/single_index_ops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/scorepwrapper.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/rvec.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/rkscheme.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/rajalib.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/physicsmodel.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/petsc_interface.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/paralleltransform.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/parallel_boundary_region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/parallel_boundary_op.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/output_bout_types.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/optionsreader.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/options_netcdf.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/options.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/operatorstencil.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/openmpwrap.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/multiostream.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/msg_stack.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/mpi_wrapper.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/monitor.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/mesh.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/mask.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/macro_for_each.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/lapack_routines.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/invert_parderiv.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/invert_laplace.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/invert
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/invert/laplacexz.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/invert/laplacexy2_hypre.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/invert/laplacexy2.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/invert/laplacexy.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/interpolation_z.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/interpolation_xz.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/interpolation.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/initialprofiles.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/index_derivs_interface.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/index_derivs.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/hyprelib.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/hypre_interface.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/gyro_average.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/griddata.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/globals.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/globalindexer.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/globalfield.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/generic_factory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/fv_ops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/format.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/fieldperp.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/fieldgroup.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/field_factory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/field_data.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/field_accessor.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/field3d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/field2d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/fft.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/expr.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/difops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/derivs.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/deriv_store.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/dcomplex.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/cyclic_reduction.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/coordinates_accessor.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/coordinates.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/constants.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/caliper_wrapper.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/build_config.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/boutexception.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/bout_types.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/bout_enum_class.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/bout.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/boundary_standard.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/boundary_region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/boundary_op.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/boundary_factory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/assert.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/array.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/boundary_standard.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/boundary_region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/boundary_op.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/boundary_factory.hxx
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/build_defines.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/revision.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/version.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout_4to5
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout_3to4.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-v5-xzinterpolation-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-v5-physics-model-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-v5-macro-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-v5-input-file-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-v5-header-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-v5-format-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-v5-factory-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-stop-script
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-sonnet
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-log-color
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-changelog-generator.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-build-deps.sh
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-boutdata-restart-create
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-archive-helper.sh
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-add-mod-path
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/bin/bout-config
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/bout++Targets.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/bout++Targets-relwithdebinfo.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/bout++Config.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/bout++ConfigVersion.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/BOUT++functions.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/CorrectWindowsPaths.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindClangFormat.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindFFTW.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindHYPRE.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindnetCDF.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindnetCDFCxx.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindPackageMultipass.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindLibuuid.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindPETSc.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindScoreP.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindSLEPc.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindSUNDIALS.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindSphinx.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/ResolveCompilerPaths.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/python3.12/site-packages/openmpi/boutconfig/__init__.py
++ grep /libbout
++ find /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/openmpi/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/python3.12/site-packages/openmpi
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout)
+ chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/openmpi/lib/libbout++.so
/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/openmpi/lib/libbout++.so: RUNPATH=:/usr/lib64/openmpi/lib
/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/openmpi/lib/libbout++.so: new RUNPATH: /usr/lib64/openmpi/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout)
+ chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/openmpi/lib/libbout++.so.5.0.0
/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/openmpi/lib/libbout++.so.5.0.0: RUNPATH=/usr/lib64/openmpi/lib
/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/openmpi/lib/libbout++.so.5.0.0: new RUNPATH: /usr/lib64/openmpi/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout)
+ chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/python3.12/site-packages/openmpi/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so
/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/python3.12/site-packages/openmpi/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so: RUNPATH=:/usr/lib64/openmpi/lib
/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64//usr/lib64/python3.12/site-packages/openmpi/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so: new RUNPATH: /usr/lib64/openmpi/lib
+ rm -rf /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/bout++
+ mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/modulefiles/bout++
+ cat
+ DESTDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64
+ /usr/bin/cmake --install build_openmpi/manual
-- Install configuration: "RelWithDebInfo"
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++/
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//objects.inv
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//searchindex.js
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/init_balloon.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/stagLocations.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/quickstart_conduction_example.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/sod_result.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/interchange_inst_test.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/snb-step.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/snb-sinusoidal.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/par_laplace.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilGlobalIndices.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilMatrix.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilMeshWithStencil.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilMesh.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/poincare.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/elliptic_grid.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/grid_gen.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/boutmesh-comms.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/topology_schematic.svg
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/topology_cross_section.svg
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/diffStencils.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/fluid_norm_mc.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/petsc_vector_set.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/operator_stencil_uml.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/petsc_interface_overview.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/memory.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/layout2.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_images/layout1.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//search.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//py-modindex.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//genindex.html
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/variable_init.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/time_integration.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/testing.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/staggered_grids.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/running_bout.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/quickstart.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/python_boutpp.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/python.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/preconditioning.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/physics_models.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/petsc.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/parallel-transforms.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/output_and_post.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/nonlocal.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/new_in_v5.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/makefiles.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/laplacian.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/invertable_operator.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/introduction.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/installing.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/input_grids.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/gpu_support.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/eigenvalue_solver.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/differential_operators.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/coordinates.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/bout_options.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/bout_functions_for_physics.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/boundary_options.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/algebraic_operators.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/advanced_install.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//user_docs/BOUT_Gradperp_op.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//index.html
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/petsc_interface.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/performance_profiling.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/natural_language.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/mesh.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/git_basics.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/file_io.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/data_types.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/contributing.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//developer_docs/code_layout.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//api_reference.html
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/variable_init.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/time_integration.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/testing.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/staggered_grids.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/running_bout.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/quickstart.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/python_boutpp.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/python.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/preconditioning.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/physics_models.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/petsc.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/parallel-transforms.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/output_and_post.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/nonlocal.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/new_in_v5.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/makefiles.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/laplacian.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/invertable_operator.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/introduction.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/installing.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/input_grids.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/gpu_support.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/eigenvalue_solver.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/differential_operators.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/coordinates.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/bout_options.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/bout_functions_for_physics.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/boundary_options.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/algebraic_operators.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/advanced_install.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/BOUT_Gradperp_op.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/index.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/petsc_interface.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/performance_profiling.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/natural_language.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/mesh.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/git_basics.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/file_io.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/data_types.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/contributing.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/code_layout.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/api_reference.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc/zoidberg.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc/boututils.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc/boutpp.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc/boutdata.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_apidoc
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_apidoc/zoidberg.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_apidoc/boututils.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_apidoc/boutpp.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_apidoc/boutdata.html
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/css
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/css/custom.css
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/contents.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/navigation.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/sphinxdoc.css
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/basic.css
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/doctools.js
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/documentation_options.js
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/file.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/language_data.js
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/minus.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/plus.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/searchtools.js
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/sphinx_highlight.js
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++//_static/pygments.css
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/openmpi/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval 'unset MPI_COMPILER;
unset LD_LIBRARY_PATH;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_HOME;
unset MPI_FORTRAN_MOD_DIR;
unset __MODULES_LMALTNAME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SUFFIX;
unset MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset MPI_COMPILER
++ unset LD_LIBRARY_PATH
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset __MODULES_LMALTNAME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ /usr/lib/rpm/find-lang.sh /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64 libbout
+ /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 5.0.0-11.fc40 --unique-debug-suffix -5.0.0-11.fc40.x86_64 --unique-debug-src-base bout++-5.0.0-11.fc40.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea
find-debuginfo: starting
Extracting debug info from 8 files
DWARF-compressing 8 files
sepdebugcrcfix: Updated 8 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/bout++-5.0.0-11.fc40.x86_64
21358 blocks
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
mangling shebang in /usr/lib64/openmpi/bin/bout-config from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/openmpi/bin/bout-add-mod-path from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-archive-helper.sh from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/openmpi/bin/bout-boutdata-restart-create from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-build-deps.sh from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/openmpi/bin/bout-changelog-generator.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-log-color from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/openmpi/bin/bout-sonnet from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-stop-script from /bin/bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-factory-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-format-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-header-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-input-file-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-macro-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-physics-model-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-xzinterpolation-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout_3to4.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout_4to5 from /bin/bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/mpich/bin/bout-config from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/mpich/bin/bout-add-mod-path from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-archive-helper.sh from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/mpich/bin/bout-boutdata-restart-create from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-build-deps.sh from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/mpich/bin/bout-changelog-generator.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-log-color from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/mpich/bin/bout-sonnet from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-stop-script from /bin/bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/mpich/bin/bout-v5-factory-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-format-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-header-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-input-file-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-macro-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-physics-model-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-xzinterpolation-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout_3to4.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout_4to5 from /bin/bash to #!/usr/bin/bash
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2
Bytecompiling .py files below /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib/debug/usr/lib64/python3.12 using python3.12
Bytecompiling .py files below /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/lib64/python3.12 using python3.12
+ /usr/lib/rpm/redhat/brp-python-hardlink
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.iADBLu
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ fail=0
+ for mpi in mpich openmpi
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64; export MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64; export MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich; export MPI_PYTHON3_SITEARCH;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich; export MPI_HOME;
__MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SYSCONFIG=/etc/mpich-x86_64; export MPI_SYSCONFIG;
MPI_SUFFIX=_mpich; export MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH;
MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB;
PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN;
test 0;'
~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich ~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ pushd build_mpich
+ export OMPI_MCA_rmaps_base_oversubscribe=yes
+ OMPI_MCA_rmaps_base_oversubscribe=yes
+ export HDF5_USE_FILE_LOCKING=FALSE
+ HDF5_USE_FILE_LOCKING=FALSE
+ export BOUT_TEST_TIMEOUT=15m
+ BOUT_TEST_TIMEOUT=15m
+ sed 's/ 3s / 30s /' tests/integrated/test-coordinates-initialization/runtest
#!/bin/bash

# Cores: 3

make || exit

test -z $MPIRUN  && MPIRUN='mpirun -np'
# Kill the test after 3 seconds, if it hasn't already exited
OMP_NUM_THREADS=1 $MPIRUN 3 timeout 30s ./test-coordinates-initialization

e=$?

if test $e -ne 0
then
    echo "The test failed. That can be caused by a timeout."
    echo "If this test is run on high load, it may fail occasionally."
    echo "The load is:"
    uptime
fi

exit $e
+ make -j2 build-check
/usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 build-check
make[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles 70
make  -f CMakeFiles/Makefile2 CMakeFiles/build-check.dir/all
make[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 42%] Building CXX object tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d-y && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y/wave.cxx
[ 42%] Linking CXX executable wave
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d-y && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d-y.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o" -o wave  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 42%] Built target MMS-wave-1d-y
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 42%] Building CXX object tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o -MF CMakeFiles/MMS-advection.dir/advection.cxx.o.d -o CMakeFiles/MMS-advection.dir/advection.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection/advection.cxx
[ 42%] Linking CXX executable advection
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-advection.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-advection.dir/advection.cxx.o" -o advection  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 42%] Built target MMS-advection
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 42%] Building CXX object tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -MF CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o.d -o CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion/diffusion.cxx
[ 42%] Linking CXX shared library ../../../../../lib/libgtest.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.10.0 -o ../../../../../lib/libgtest.so.1.10.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o" 
[ 42%] Linking CXX executable cyto
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-diffusion.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o" -o cyto  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 42%] Built target MMS-diffusion
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 44%] Building CXX object tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d/wave.cxx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgtest.so.1.10.0 ../../../../../lib/libgtest.so.1.10.0 ../../../../../lib/libgtest.so
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 44%] Built target gtest
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown-weights /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 44%] Building CXX object tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown-weights && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -MF CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o.d -o CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights/test_yupdown_weights.cxx
[ 44%] Linking CXX executable wave
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d.dir/wave.cxx.o" -o wave  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 45%] Linking CXX executable test_yupdown_weights
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown-weights && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown-weights.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o" -o test_yupdown_weights  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 45%] Built target MMS-wave-1d
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 48%] Built target boutpp.cpython-312-x86_64-linux-gnu
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-backtrace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 50%] Building CXX object tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-backtrace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -MF CMakeFiles/test-backtrace.dir/boutexcept.cxx.o.d -o CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace/boutexcept.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 50%] Built target test-yupdown-weights
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-beuler /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 50%] Building CXX object tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-beuler && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o -MF CMakeFiles/test_beuler.dir/test_beuler.cxx.o.d -o CMakeFiles/test_beuler.dir/test_beuler.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler/test_beuler.cxx
[ 50%] Linking CXX executable boutexcept
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-backtrace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-backtrace.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-backtrace.dir/boutexcept.cxx.o" -o boutexcept  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 50%] Built target test-backtrace
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 50%] Building CXX object tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-bout-override-default-option && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -MF CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o.d -o CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx:1:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/options.hxx:3:2: warning: #warning Header "options.hxx" has moved to "bout/options.hxx". Run `bin/bout-v5-header-upgrader.py` to fix [-Wcpp]
    3 | #warning Header "options.hxx" has moved to "bout/options.hxx". Run `bin/bout-v5-header-upgrader.py` to fix
      |  ^~~~~~~
[ 50%] Linking CXX executable test_beuler
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-beuler && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_beuler.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/test_beuler.dir/test_beuler.cxx.o -o test_beuler  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 50%] Linking CXX executable test-bout-override-default-option
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-bout-override-default-option && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-bout-override-default-option.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o" -o test-bout-override-default-option  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 50%] Built target test_beuler
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-command-args /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 51%] Building CXX object tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-command-args && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o -MF CMakeFiles/test-command-args.dir/command-args.cxx.o.d -o CMakeFiles/test-command-args.dir/command-args.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args/command-args.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 51%] Built target test-bout-override-default-option
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-communications /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 51%] Building CXX object tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-communications && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o -MF CMakeFiles/test-communications.dir/test-communications.cxx.o.d -o CMakeFiles/test-communications.dir/test-communications.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications/test-communications.cxx
[ 51%] Linking CXX executable command-args
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-command-args && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-command-args.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-command-args.dir/command-args.cxx.o" -o command-args  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 51%] Built target test-command-args
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 51%] Building CXX object tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-coordinates-initialization && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -MF CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o.d -o CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization/test-coordinates-initialization.cxx
[ 51%] Linking CXX executable test-communications
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-communications && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-communications.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-communications.dir/test-communications.cxx.o" -o test-communications  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 51%] Built target test-communications
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-cyclic /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 51%] Building CXX object tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-cyclic && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -MF CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o.d -o CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic/test_cyclic.cxx
[ 52%] Linking CXX executable test-coordinates-initialization
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-coordinates-initialization && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-coordinates-initialization.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o" -o test-coordinates-initialization  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 52%] Built target test-coordinates-initialization
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2 /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-delp2 /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 52%] Building CXX object tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-delp2 && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o -MF CMakeFiles/test-delp2.dir/test_delp2.cxx.o.d -o CMakeFiles/test-delp2.dir/test_delp2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2/test_delp2.cxx
[ 52%] Linking CXX executable test_delp2
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-delp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-delp2.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-delp2.dir/test_delp2.cxx.o" -o test_delp2  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 52%] Linking CXX executable test_cyclic
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-cyclic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-cyclic.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o" -o test_cyclic  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 52%] Built target test-delp2
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-datafilefacade /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 52%] Building CXX object tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-datafilefacade && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -MF CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o.d -o CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade/test-datafile-facade.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 52%] Built target test-cyclic
make  -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 52%] Building CXX object tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability/2fluid.cxx
[ 54%] Linking CXX executable test-datafile-facade
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-datafilefacade && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-datafile-facade.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o" -o test-datafile-facade  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 54%] Built target test-datafile-facade
make  -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 54%] Building CXX object tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability-staggered && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered/2fluid.cxx
[ 54%] Linking CXX executable 2fluid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability.dir/2fluid.cxx.o" -o 2fluid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 54%] Built target test-drift-instability
make  -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 54%] Building CXX object tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-fieldgroupComm && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -MF CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o.d -o CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm/test_fieldgroupcomm.cxx
[ 55%] Linking CXX executable 2fluid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability-staggered.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o" -o 2fluid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 55%] Linking CXX executable test_fieldgroupcomm
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-fieldgroupComm && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fieldgroupComm.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o" -o test_fieldgroupcomm  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 55%] Built target test-drift-instability-staggered
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 55%] Building CXX object tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata.dir/test_griddata.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata/test_griddata.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 55%] Built target test-fieldgroupComm
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 55%] Building CXX object tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata-yboundary-guards && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards/test_griddata.cxx
[ 57%] Linking CXX executable test_griddata
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata.dir/test_griddata.cxx.o" -o test_griddata  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 57%] Linking CXX executable test_griddata
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata-yboundary-guards && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata-yboundary-guards.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o" -o test_griddata  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 57%] Built target test-griddata
make  -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-gyro /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 57%] Building CXX object tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-gyro && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o -MF CMakeFiles/test-gyro.dir/test_gyro.cxx.o.d -o CMakeFiles/test-gyro.dir/test_gyro.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro/test_gyro.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 57%] Built target test-griddata-yboundary-guards
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-initial /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 57%] Building CXX object tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-initial && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o -MF CMakeFiles/test-initial.dir/test_initial.cxx.o.d -o CMakeFiles/test-initial.dir/test_initial.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial/test_initial.cxx
[ 57%] Linking CXX executable test_initial
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-initial && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-initial.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-initial.dir/test_initial.cxx.o" -o test_initial  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 58%] Linking CXX executable test_gyro
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-gyro && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-gyro.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-gyro.dir/test_gyro.cxx.o" -o test_gyro  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 58%] Built target test-initial
make  -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interchange-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 58%] Building CXX object tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interchange-instability && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability/2fluid.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 58%] Built target test-gyro
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 58%] Building CXX object tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate/test_interpolate.cxx
[ 58%] Linking CXX executable test_interpolate
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o" -o test_interpolate  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 60%] Linking CXX executable 2fluid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interchange-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interchange-instability.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o" -o 2fluid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 60%] Built target test-interpolate
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate-z /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 60%] Building CXX object tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate-z && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z/test_interpolate.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 60%] Built target test-interchange-instability
make  -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invertable-operator /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 61%] Building CXX object tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invertable-operator && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -MF CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o.d -o CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx:4:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx: In instantiation of ‘PetscErrorCode bout::inversion::InvertableOperator<T>::setup() [with T = Field3D; PetscErrorCode = int]’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx:51:19:   required from here
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:44:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  225 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  225 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  231 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  231 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:265:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  265 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:265:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  265 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:270:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  270 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:270:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  270 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
[ 61%] Linking CXX executable test_interpolate
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate-z && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate-z.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o" -o test_interpolate  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 61%] Built target test-interpolate-z
make  -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invpar /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 61%] Building CXX object tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invpar && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o -MF CMakeFiles/test-invpar.dir/test_invpar.cxx.o.d -o CMakeFiles/test-invpar.dir/test_invpar.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar/test_invpar.cxx
[ 61%] Linking CXX executable invertable_operator
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invertable-operator && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invertable-operator.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o" -o invertable_operator  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 61%] Built target test-invertable-operator
make  -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 62%] Building CXX object tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o -MF CMakeFiles/test-laplace.dir/test_laplace.cxx.o.d -o CMakeFiles/test-laplace.dir/test_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace/test_laplace.cxx
[ 62%] Linking CXX executable test_invpar
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invpar && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invpar.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invpar.dir/test_invpar.cxx.o" -o test_invpar  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 62%] Built target test-invpar
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 62%] Building CXX object tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace-petsc3d && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -MF CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o.d -o CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d/test-laplace3d.cxx
[ 62%] Linking CXX executable test_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace.dir/test_laplace.cxx.o" -o test_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 62%] Built target test-laplace
make  -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 64%] Building CXX object tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-fv && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv/test-laplacexy.cxx
[ 64%] Linking CXX executable test-laplace3d
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace-petsc3d && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace-petsc3d.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o" -o test-laplace3d  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 64%] Linking CXX executable test-laplacexy
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-fv && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-fv.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o" -o test-laplacexy  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 64%] Built target test-laplace-petsc3d
make  -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-short /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 64%] Building CXX object tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-short && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short/test-laplacexy.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 64%] Built target test-laplacexy-fv
make  -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexz /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 65%] Building CXX object tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexz && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -MF CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o.d -o CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz/test-laplacexz.cxx
[ 65%] Linking CXX executable test-laplacexy
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-short && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-short.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o" -o test-laplacexy  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 65%] Built target test-laplacexy-short
make  -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 65%] Building CXX object tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-multigrid_laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -MF CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o.d -o CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace/test_multigrid_laplace.cxx
[ 65%] Linking CXX executable test-laplacexz
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexz && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexz.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o" -o test-laplacexz  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 65%] Built target test-laplacexz
make  -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-naulin-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 67%] Building CXX object tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-naulin-laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -MF CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o.d -o CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace/test_naulin_laplace.cxx
[ 67%] Linking CXX executable test_multigrid_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-multigrid_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-multigrid-laplace.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o" -o test_multigrid_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 67%] Linking CXX executable test_naulin_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-naulin-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-naulin-laplace.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o" -o test_naulin_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 67%] Built target test-multigrid-laplace
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-options-netcdf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 67%] Building CXX object tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-options-netcdf && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -MF CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o.d -o CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf/test-options-netcdf.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 67%] Built target test-naulin-laplace
make  -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 68%] Building CXX object tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -MF CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o.d -o CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace/test_petsc_laplace.cxx
[ 68%] Linking CXX executable test-options-netcdf
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-options-netcdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-options-netcdf.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o" -o test-options-netcdf  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 68%] Built target test-options-netcdf
make  -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 68%] Building CXX object tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -MF CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o.d -o CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid/test_petsc_laplace_MAST_grid.cxx
[ 68%] Linking CXX executable test_petsc_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o" -o test_petsc_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 68%] Built target test-petsc-laplace
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restart-io /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 70%] Building CXX object tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restart-io && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -MF CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o.d -o CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io/test-restart-io.cxx
[ 70%] Linking CXX executable test_petsc_laplace_MAST_grid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o" -o test_petsc_laplace_MAST_grid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 70%] Built target test-petsc-laplace-MAST-grid
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restarting /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 70%] Building CXX object tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restarting && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o -MF CMakeFiles/test-restarting.dir/test_restarting.cxx.o.d -o CMakeFiles/test-restarting.dir/test_restarting.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting/test_restarting.cxx
[ 70%] Linking CXX executable test-restart-io
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restart-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restart-io.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o" -o test-restart-io  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 70%] Built target test-restart-io
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-smooth /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 70%] Building CXX object tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-smooth && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o -MF CMakeFiles/test-smooth.dir/test_smooth.cxx.o.d -o CMakeFiles/test-smooth.dir/test_smooth.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth/test_smooth.cxx
[ 70%] Linking CXX executable test_restarting
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restarting && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restarting.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restarting.dir/test_restarting.cxx.o" -o test_restarting  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 70%] Built target test-restarting
make  -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-snb /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 70%] Building CXX object tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-snb && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o -MF CMakeFiles/test-snb.dir/test_snb.cxx.o.d -o CMakeFiles/test-snb.dir/test_snb.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb/test_snb.cxx
[ 71%] Linking CXX executable test_smooth
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-smooth && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-smooth.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-smooth.dir/test_smooth.cxx.o" -o test_smooth  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 71%] Built target test-smooth
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-solver /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 71%] Building CXX object tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-solver && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o -MF CMakeFiles/test-solver.dir/test_solver.cxx.o.d -o CMakeFiles/test-solver.dir/test_solver.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver/test_solver.cxx
[ 71%] Linking CXX executable test_snb
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-snb && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-snb.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-snb.dir/test_snb.cxx.o" -o test_snb  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 72%] Linking CXX executable test_solver
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-solver && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-solver.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-solver.dir/test_solver.cxx.o" -o test_solver  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 72%] Built target test-snb
make  -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-squash /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 72%] Building CXX object tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-squash && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o -MF CMakeFiles/test-squash.dir/squash.cxx.o.d -o CMakeFiles/test-squash.dir/squash.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash/squash.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 72%] Built target test-solver
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 72%] Building CXX object tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck/test_stopCheck.cxx
[ 72%] Linking CXX executable squash
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-squash && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-squash.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-squash.dir/squash.cxx.o" -o squash  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 72%] Built target test-squash
make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck-file /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 72%] Building CXX object tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck-file && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file/test_stopCheck.cxx
[ 74%] Linking CXX executable test_stopCheck
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o" -o test_stopCheck  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 74%] Built target test-stopCheck
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 74%] Building CXX object tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift/test-twistshift.cxx
[ 74%] Linking CXX executable test_stopCheck
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck-file && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck-file.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o" -o test_stopCheck  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 75%] Linking CXX executable test-twistshift
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o" -o test-twistshift  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 75%] Built target test-stopCheck-file
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 75%] Building CXX object tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift-staggered && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered/test-twistshift.cxx
[ 75%] Built target test-twistshift
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-vec /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 75%] Building CXX object tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-vec && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o -MF CMakeFiles/test-vec.dir/testVec.cxx.o.d -o CMakeFiles/test-vec.dir/testVec.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec/testVec.cxx
[ 75%] Linking CXX executable test-twistshift
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift-staggered.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o" -o test-twistshift  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 75%] Built target test-twistshift-staggered
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 75%] Building CXX object tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -MF CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o.d -o CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown/test_yupdown.cxx
[ 77%] Linking CXX executable testVec
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-vec && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vec.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-vec.dir/testVec.cxx.o" -o testVec  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 77%] Built target test-vec
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 77%] Built target build-check-mms-tests
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 77%] Building CXX object tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/lib64/mpich/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgmock_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Werror -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/src/gmock-all.cc
[ 77%] Linking CXX executable test_yupdown
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o" -o test_yupdown  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 77%] Built target test-yupdown
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 77%] Building python interface
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-312-x86_64-linux-gnu.so /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
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make  -f CMakeFiles/build-check-integrated-tests.dir/build.make CMakeFiles/build-check-integrated-tests.dir/depend
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/build-check-integrated-tests.dir/DependInfo.cmake "--color="
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[ 77%] Built target build-check-integrated-tests
[ 78%] Linking CXX shared library ../../../../../lib/libgmock.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.10.0 -o ../../../../../lib/libgmock.so.1.10.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o"  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../../../lib/libgtest.so.1.10.0 
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgmock.so.1.10.0 ../../../../../lib/libgmock.so.1.10.0 ../../../../../lib/libgmock.so
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 78%] Built target gmock
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o
[ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -MF CMakeFiles/serial_tests.dir/bout_test_main.cxx.o.d -o CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx: In function ‘int main(int, char**)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx:29:18: warning: unused variable ‘hyprelib’ [-Wunused-variable]
   29 |   bout::HypreLib hyprelib{};
      |                  ^~~~~~~~
[ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field2d.cxx
[ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field3d.cxx
[ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field_factory.cxx
[ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_fieldgroup.cxx
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/mesh/test_paralleltransform.cxx
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o -MF CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o.d -o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/solver/test_fakesolver.cxx
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/sys/test_boutexception.cxx
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/sys/test_expressionparser.cxx
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/sys/test_timer.cxx
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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/sys/test_raja.cxx:96:7: warning: multi-line comment [-Wcomment]
   96 | #if 0 // disable temporarily until reconcile iteration space for parallel_forall  under \
      |       ^
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/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/serial_tests.dir/bout_test_main.cxx.o CMakeFiles/serial_tests.dir/field/test_field.cxx.o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o CMakeFiles/serial_tests.dir/field/test_vector3d.cxx.o CMakeFiles/serial_tests.dir/field/test_where.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_array.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_assert.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_bout_enum_class.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_deriv_store.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_generic_factory.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_macro_for_each.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_monitor.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_setters.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_vector.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_region.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_single_index_ops.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_cyclic.cxx.o CMakeFiles/serial_tests.dir/mesh/data/test_gridfromoptions.cxx.o CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solverfactory.cxx.o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o CMakeFiles/serial_tests.dir/sys/test_options.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o CMakeFiles/serial_tests.dir/test_extras.cxx.o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -o serial_tests  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../lib/libgmock.so.1.10.0 ../../lib/libbout++.so.5.0.0 ../../lib/libgtest.so.1.10.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
/usr/bin/ld: /tmp/cc8Fg1b7.ltrans106.ltrans.o: in function `testing::internal::TestFactoryImpl<OptionsNetCDFTest_WriteMultipleTimeDimensions_Test>::CreateTest()':
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make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 44%] Built target build-check-mms-tests
make  -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
ctest -R MMS- --output-on-failure
Test project /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich
    Start 52: MMS-diffusion
1/7 Test #52: MMS-diffusion ....................   Passed    4.37 sec
    Start 53: MMS-wave-1d
2/7 Test #53: MMS-wave-1d ......................   Passed    3.94 sec
    Start 54: MMS-wave-1d-y
3/7 Test #54: MMS-wave-1d-y ....................   Passed    3.99 sec
    Start 55: MMS-bracket
4/7 Test #55: MMS-bracket ......................   Passed    0.42 sec
    Start 56: MMS-derivatives3
5/7 Test #56: MMS-derivatives3 .................   Passed    0.72 sec
    Start 57: MMS-shiftedmetricinterp
6/7 Test #57: MMS-shiftedmetricinterp ..........   Passed    3.61 sec
    Start 58: MMS-upwinding3
7/7 Test #58: MMS-upwinding3 ...................   Passed    0.98 sec

100% tests passed, 0 tests failed out of 7

Total Test time (real) =  18.04 sec
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
Built target check-mms-tests
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
Built target gtest
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
Built target gmock
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'tests/unit/CMakeFiles/serial_tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
Built target serial_tests
make  -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
Built target build-check-unit-tests
make  -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/check-unit-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
ctest -R serial_tests --output-on-failure
Test project /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich
    Start 1: serial_tests
1/1 Test #1: serial_tests .....................***Failed    3.82 sec
Running main() from bout_test_main.cxx

[WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 3 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out.

[WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 3 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out.

[WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 3 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out.
Timer::resetTime
Timer name         | Total time (s) | % of top | Hits | Mean time/hit (s)
-------------------|----------------|----------|------|------------------
one                | 0.003171802    | 1.00     | 1    | 0.003171802      
two                | 0.002113356    | 0.67     | 2    | 0.001056678      
18 characters long | 9.3e-08        | 0.00     | 1    | 9.3e-08          
Calculating differential geometry terms
	Option ddx:first = C2 ()
	Option ddx:upwind = C2 ()
	Option ddy:first = C2 ()
	Option ddy:upwind = C2 ()
	Option ddz:first = C2 ()
	Option ddz:upwind = C2 ()
	Option ddy:first = C2 ()
	Option ddy:upwind = C2 ()
	Option ddx:first = C2 ()
	Option ddx:upwind = C2 ()
	Option ddy:first = C2 ()
	Option ddy:upwind = C2 ()
	Option ddz:first = C2 ()
	Option ddz:upwind = C2 ()
	Option ddy:first = C2 ()
	Option ddy:upwind = C2 ()
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field.cxx:238: Failure
Expected: getUniform(nonuniform) throws an exception of type BoutException.
  Actual: it throws fmt::v10::format_error with description "argument not found".
[  FAILED  ] FieldTest.GetUniformFalse3D (0 ms)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field.cxx:251: Failure
Expected: getUniform(nonuniform) throws an exception of type BoutException.
  Actual: it throws fmt::v10::format_error with description "argument not found".
[  FAILED  ] FieldTest.GetUniformFalse2D (0 ms)
[==========] 2158 tests from 141 test suites ran. (3515 ms total)
[  PASSED  ] 2156 tests.


0% tests passed, 1 tests failed out of 1

Total Test time (real) =   3.83 sec

The following tests FAILED:
	  1 - serial_tests (Failed)
Errors while running CTest
make[3]: *** [CMakeFiles/check-unit-tests.dir/build.make:73: CMakeFiles/check-unit-tests] Error 8
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[2]: *** [CMakeFiles/Makefile2:2743: CMakeFiles/check-unit-tests.dir/all] Error 2
make[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[1]: *** [CMakeFiles/Makefile2:2830: CMakeFiles/check.dir/rule] Error 2
make[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make: *** [Makefile:286: check] Error 2
++ exit 0
+ popd
~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/mpich/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval 'unset LD_LIBRARY_PATH;
unset MPI_COMPILER;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset MPI_PYTHON_SITEARCH;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_FORTRAN_MOD_DIR;
unset MPI_HOME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SYSCONFIG;
unset MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_PYTHON2_SITEARCH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_PYTHON2_SITEARCH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ for mpi in mpich openmpi
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64; export MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH;
MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/openmpi-x86_64; export MPI_MAN;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi; export MPI_PYTHON3_SITEARCH;
MPI_HOME=/usr/lib64/openmpi; export MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR;
__MODULES_LMALTNAME=mpi/openmpi-x86_64\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME;
__MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SUFFIX=_openmpi; export MPI_SUFFIX;
MPI_SYSCONFIG=/etc/openmpi-x86_64; export MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN;
test 0;'
~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi ~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest'
++ export __MODULES_LMALTNAME
++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export OMPI_MCA_rmaps_base_oversubscribe=1
+ OMPI_MCA_rmaps_base_oversubscribe=1
+ pushd build_openmpi
+ export OMPI_MCA_rmaps_base_oversubscribe=yes
+ OMPI_MCA_rmaps_base_oversubscribe=yes
+ export HDF5_USE_FILE_LOCKING=FALSE
+ HDF5_USE_FILE_LOCKING=FALSE
+ export BOUT_TEST_TIMEOUT=15m
+ BOUT_TEST_TIMEOUT=15m
+ sed 's/ 3s / 30s /' tests/integrated/test-coordinates-initialization/runtest
#!/bin/bash

# Cores: 3

make || exit

test -z $MPIRUN  && MPIRUN='mpirun -np'
# Kill the test after 3 seconds, if it hasn't already exited
OMP_NUM_THREADS=1 $MPIRUN 3 timeout 30s ./test-coordinates-initialization

e=$?

if test $e -ne 0
then
    echo "The test failed. That can be caused by a timeout."
    echo "If this test is run on high load, it may fail occasionally."
    echo "The load is:"
    uptime
fi

exit $e
+ make -j2 build-check
/usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 build-check
make[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
/usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles 70
make  -f CMakeFiles/Makefile2 CMakeFiles/build-check.dir/all
make[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
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make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[  0%] Built target pvpre
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color="
[  2%] Built target pvode
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[  2%] Building CXX object tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/lib64/openmpi/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgtest_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Werror -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-all.cc
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 42%] Built target bout++
make  -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 42%] Building CXX object tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y/wave.cxx
[ 42%] Linking CXX executable wave
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d-y.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o" -o wave  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 42%] Built target MMS-wave-1d-y
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 42%] Building CXX object tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/advection && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o -MF CMakeFiles/MMS-advection.dir/advection.cxx.o.d -o CMakeFiles/MMS-advection.dir/advection.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection/advection.cxx
[ 42%] Linking CXX executable advection
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/advection && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-advection.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-advection.dir/advection.cxx.o" -o advection  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 42%] Linking CXX shared library ../../../../../lib/libgtest.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.10.0 -o ../../../../../lib/libgtest.so.1.10.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o" 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 42%] Built target MMS-advection
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 42%] Building CXX object tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -MF CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o.d -o CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion/diffusion.cxx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgtest.so.1.10.0 ../../../../../lib/libgtest.so.1.10.0 ../../../../../lib/libgtest.so
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 42%] Built target gtest
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 44%] Building CXX object tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d/wave.cxx
[ 44%] Linking CXX executable cyto
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-diffusion.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o" -o cyto  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 44%] Built target MMS-diffusion
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 44%] Building CXX object tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/lib64/openmpi/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgmock_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Werror -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/src/gmock-all.cc
[ 44%] Linking CXX executable wave
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d.dir/wave.cxx.o" -o wave  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 44%] Built target MMS-wave-1d
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown-weights /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 44%] Building CXX object tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown-weights && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -MF CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o.d -o CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights/test_yupdown_weights.cxx
[ 45%] Linking CXX shared library ../../../../../lib/libgmock.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.10.0 -o ../../../../../lib/libgmock.so.1.10.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o"  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../../../lib/libgtest.so.1.10.0 
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgmock.so.1.10.0 ../../../../../lib/libgmock.so.1.10.0 ../../../../../lib/libgmock.so
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 45%] Built target gmock
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 48%] Built target boutpp.cpython-312-x86_64-linux-gnu
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-backtrace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 50%] Building CXX object tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-backtrace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -MF CMakeFiles/test-backtrace.dir/boutexcept.cxx.o.d -o CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace/boutexcept.cxx
[ 50%] Linking CXX executable boutexcept
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-backtrace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-backtrace.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-backtrace.dir/boutexcept.cxx.o" -o boutexcept  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 51%] Linking CXX executable test_yupdown_weights
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown-weights && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown-weights.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o" -o test_yupdown_weights  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 51%] Built target test-backtrace
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-beuler /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 51%] Building CXX object tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-beuler && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o -MF CMakeFiles/test_beuler.dir/test_beuler.cxx.o.d -o CMakeFiles/test_beuler.dir/test_beuler.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler/test_beuler.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 51%] Built target test-yupdown-weights
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 51%] Building CXX object tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-bout-override-default-option && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -MF CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o.d -o CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx:1:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/options.hxx:3:2: warning: #warning Header "options.hxx" has moved to "bout/options.hxx". Run `bin/bout-v5-header-upgrader.py` to fix [-Wcpp]
    3 | #warning Header "options.hxx" has moved to "bout/options.hxx". Run `bin/bout-v5-header-upgrader.py` to fix
      |  ^~~~~~~
[ 51%] Linking CXX executable test_beuler
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-beuler && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_beuler.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/test_beuler.dir/test_beuler.cxx.o -o test_beuler  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 51%] Linking CXX executable test-bout-override-default-option
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-bout-override-default-option && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-bout-override-default-option.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o" -o test-bout-override-default-option  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 51%] Built target test_beuler
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-command-args /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 52%] Building CXX object tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-command-args && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o -MF CMakeFiles/test-command-args.dir/command-args.cxx.o.d -o CMakeFiles/test-command-args.dir/command-args.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args/command-args.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 52%] Built target test-bout-override-default-option
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-communications /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 52%] Building CXX object tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-communications && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o -MF CMakeFiles/test-communications.dir/test-communications.cxx.o.d -o CMakeFiles/test-communications.dir/test-communications.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications/test-communications.cxx
[ 52%] Linking CXX executable command-args
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-command-args && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-command-args.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-command-args.dir/command-args.cxx.o" -o command-args  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 52%] Built target test-command-args
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 52%] Building CXX object tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-coordinates-initialization && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -MF CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o.d -o CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization/test-coordinates-initialization.cxx
[ 52%] Linking CXX executable test-communications
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-communications && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-communications.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-communications.dir/test-communications.cxx.o" -o test-communications  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 52%] Built target test-communications
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-cyclic /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 52%] Building CXX object tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-cyclic && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -MF CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o.d -o CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic/test_cyclic.cxx
[ 54%] Linking CXX executable test-coordinates-initialization
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-coordinates-initialization && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-coordinates-initialization.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o" -o test-coordinates-initialization  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 54%] Built target test-coordinates-initialization
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2 /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-delp2 /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 54%] Building CXX object tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-delp2 && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o -MF CMakeFiles/test-delp2.dir/test_delp2.cxx.o.d -o CMakeFiles/test-delp2.dir/test_delp2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2/test_delp2.cxx
[ 54%] Linking CXX executable test_cyclic
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-cyclic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-cyclic.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o" -o test_cyclic  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 54%] Linking CXX executable test_delp2
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-delp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-delp2.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-delp2.dir/test_delp2.cxx.o" -o test_delp2  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 54%] Built target test-cyclic
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-datafilefacade /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 54%] Building CXX object tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-datafilefacade && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -MF CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o.d -o CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade/test-datafile-facade.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 54%] Built target test-delp2
make  -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 54%] Building CXX object tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability/2fluid.cxx
[ 55%] Linking CXX executable test-datafile-facade
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-datafilefacade && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-datafile-facade.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o" -o test-datafile-facade  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 55%] Built target test-datafile-facade
make  -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 55%] Building CXX object tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability-staggered && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered/2fluid.cxx
[ 55%] Linking CXX executable 2fluid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability.dir/2fluid.cxx.o" -o 2fluid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 55%] Built target test-drift-instability
make  -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 55%] Building CXX object tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-fieldgroupComm && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -MF CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o.d -o CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm/test_fieldgroupcomm.cxx
[ 57%] Linking CXX executable 2fluid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability-staggered.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o" -o 2fluid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 57%] Linking CXX executable test_fieldgroupcomm
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-fieldgroupComm && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fieldgroupComm.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o" -o test_fieldgroupcomm  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 57%] Built target test-drift-instability-staggered
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 57%] Building CXX object tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata.dir/test_griddata.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata/test_griddata.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 57%] Built target test-fieldgroupComm
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 57%] Building CXX object tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata-yboundary-guards && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards/test_griddata.cxx
[ 58%] Linking CXX executable test_griddata
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata.dir/test_griddata.cxx.o" -o test_griddata  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 58%] Linking CXX executable test_griddata
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata-yboundary-guards && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata-yboundary-guards.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o" -o test_griddata  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 58%] Built target test-griddata
make  -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-gyro /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 58%] Building CXX object tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-gyro && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o -MF CMakeFiles/test-gyro.dir/test_gyro.cxx.o.d -o CMakeFiles/test-gyro.dir/test_gyro.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro/test_gyro.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 58%] Built target test-griddata-yboundary-guards
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-initial /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 58%] Building CXX object tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-initial && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o -MF CMakeFiles/test-initial.dir/test_initial.cxx.o.d -o CMakeFiles/test-initial.dir/test_initial.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial/test_initial.cxx
[ 58%] Linking CXX executable test_initial
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-initial && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-initial.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-initial.dir/test_initial.cxx.o" -o test_initial  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 60%] Linking CXX executable test_gyro
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-gyro && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-gyro.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-gyro.dir/test_gyro.cxx.o" -o test_gyro  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 60%] Built target test-initial
make  -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interchange-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 60%] Building CXX object tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interchange-instability && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability/2fluid.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 60%] Built target test-gyro
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 60%] Building CXX object tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate/test_interpolate.cxx
[ 61%] Linking CXX executable 2fluid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interchange-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interchange-instability.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o" -o 2fluid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 61%] Linking CXX executable test_interpolate
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o" -o test_interpolate  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 61%] Built target test-interpolate
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate-z /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 61%] Building CXX object tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate-z && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z/test_interpolate.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 61%] Built target test-interchange-instability
make  -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invertable-operator /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 62%] Building CXX object tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invertable-operator && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -MF CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o.d -o CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx:4:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx: In instantiation of ‘PetscErrorCode bout::inversion::InvertableOperator<T>::setup() [with T = Field3D; PetscErrorCode = int]’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx:51:19:   required from here
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:44:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  225 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  225 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  231 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  231 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:265:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  265 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:265:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  265 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:270:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  270 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:270:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  270 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
[ 62%] Linking CXX executable test_interpolate
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate-z && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate-z.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o" -o test_interpolate  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 62%] Linking CXX executable invertable_operator
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invertable-operator && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invertable-operator.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o" -o invertable_operator  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 62%] Built target test-interpolate-z
make  -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invpar /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 62%] Building CXX object tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invpar && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o -MF CMakeFiles/test-invpar.dir/test_invpar.cxx.o.d -o CMakeFiles/test-invpar.dir/test_invpar.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar/test_invpar.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 62%] Built target test-invertable-operator
make  -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 64%] Building CXX object tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o -MF CMakeFiles/test-laplace.dir/test_laplace.cxx.o.d -o CMakeFiles/test-laplace.dir/test_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace/test_laplace.cxx
[ 64%] Linking CXX executable test_invpar
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invpar && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invpar.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invpar.dir/test_invpar.cxx.o" -o test_invpar  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 64%] Linking CXX executable test_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace.dir/test_laplace.cxx.o" -o test_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 64%] Built target test-invpar
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 64%] Building CXX object tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace-petsc3d && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -MF CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o.d -o CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d/test-laplace3d.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 64%] Built target test-laplace
make  -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 65%] Building CXX object tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-fv && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv/test-laplacexy.cxx
[ 65%] Linking CXX executable test-laplace3d
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace-petsc3d && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace-petsc3d.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o" -o test-laplace3d  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 65%] Linking CXX executable test-laplacexy
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-fv && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-fv.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o" -o test-laplacexy  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 65%] Built target test-laplace-petsc3d
make  -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-short /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 65%] Building CXX object tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-short && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short/test-laplacexy.cxx
[ 65%] Built target test-laplacexy-fv
make  -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexz /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 67%] Building CXX object tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexz && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -MF CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o.d -o CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz/test-laplacexz.cxx
[ 67%] Linking CXX executable test-laplacexy
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-short && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-short.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o" -o test-laplacexy  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 67%] Linking CXX executable test-laplacexz
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexz && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexz.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o" -o test-laplacexz  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 67%] Built target test-laplacexy-short
make  -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 67%] Building CXX object tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-multigrid_laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -MF CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o.d -o CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace/test_multigrid_laplace.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 67%] Built target test-laplacexz
make  -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-naulin-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 68%] Building CXX object tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-naulin-laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -MF CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o.d -o CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace/test_naulin_laplace.cxx
[ 68%] Linking CXX executable test_multigrid_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-multigrid_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-multigrid-laplace.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o" -o test_multigrid_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 68%] Linking CXX executable test_naulin_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-naulin-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-naulin-laplace.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o" -o test_naulin_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 68%] Built target test-naulin-laplace
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-options-netcdf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 68%] Building CXX object tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-options-netcdf && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -MF CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o.d -o CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf/test-options-netcdf.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 68%] Built target test-multigrid-laplace
make  -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 70%] Building CXX object tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -MF CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o.d -o CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace/test_petsc_laplace.cxx
[ 70%] Linking CXX executable test-options-netcdf
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-options-netcdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-options-netcdf.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o" -o test-options-netcdf  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 70%] Built target test-options-netcdf
make  -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 70%] Building CXX object tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -MF CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o.d -o CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid/test_petsc_laplace_MAST_grid.cxx
[ 70%] Linking CXX executable test_petsc_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o" -o test_petsc_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 70%] Built target test-petsc-laplace
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restart-io /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 71%] Building CXX object tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restart-io && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -MF CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o.d -o CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io/test-restart-io.cxx
[ 71%] Linking CXX executable test_petsc_laplace_MAST_grid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o" -o test_petsc_laplace_MAST_grid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 71%] Linking CXX executable test-restart-io
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restart-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restart-io.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o" -o test-restart-io  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 71%] Built target test-petsc-laplace-MAST-grid
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restarting /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 71%] Building CXX object tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restarting && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o -MF CMakeFiles/test-restarting.dir/test_restarting.cxx.o.d -o CMakeFiles/test-restarting.dir/test_restarting.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting/test_restarting.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 71%] Built target test-restart-io
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-smooth /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 71%] Building CXX object tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-smooth && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o -MF CMakeFiles/test-smooth.dir/test_smooth.cxx.o.d -o CMakeFiles/test-smooth.dir/test_smooth.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth/test_smooth.cxx
[ 71%] Linking CXX executable test_restarting
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restarting && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restarting.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restarting.dir/test_restarting.cxx.o" -o test_restarting  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 72%] Linking CXX executable test_smooth
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-smooth && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-smooth.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-smooth.dir/test_smooth.cxx.o" -o test_smooth  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 72%] Built target test-restarting
make  -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-snb /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 72%] Building CXX object tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-snb && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o -MF CMakeFiles/test-snb.dir/test_snb.cxx.o.d -o CMakeFiles/test-snb.dir/test_snb.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb/test_snb.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 72%] Built target test-smooth
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-solver /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 72%] Building CXX object tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-solver && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o -MF CMakeFiles/test-solver.dir/test_solver.cxx.o.d -o CMakeFiles/test-solver.dir/test_solver.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver/test_solver.cxx
[ 72%] Linking CXX executable test_snb
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-snb && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-snb.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-snb.dir/test_snb.cxx.o" -o test_snb  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 74%] Linking CXX executable test_solver
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-solver && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-solver.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-solver.dir/test_solver.cxx.o" -o test_solver  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 74%] Built target test-solver
make  -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-squash /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 74%] Building CXX object tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-squash && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o -MF CMakeFiles/test-squash.dir/squash.cxx.o.d -o CMakeFiles/test-squash.dir/squash.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash/squash.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 74%] Built target test-snb
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 74%] Building CXX object tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck/test_stopCheck.cxx
[ 74%] Linking CXX executable squash
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-squash && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-squash.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-squash.dir/squash.cxx.o" -o squash  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 75%] Linking CXX executable test_stopCheck
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o" -o test_stopCheck  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 75%] Built target test-squash
make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck-file /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 75%] Building CXX object tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck-file && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file/test_stopCheck.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 75%] Built target test-stopCheck
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 75%] Building CXX object tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift/test-twistshift.cxx
[ 77%] Linking CXX executable test-twistshift
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o" -o test-twistshift  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 77%] Linking CXX executable test_stopCheck
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck-file && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck-file.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o" -o test_stopCheck  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 77%] Built target test-twistshift
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 77%] Building CXX object tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift-staggered && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered/test-twistshift.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 77%] Built target test-stopCheck-file
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-vec /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 77%] Building CXX object tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-vec && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o -MF CMakeFiles/test-vec.dir/testVec.cxx.o.d -o CMakeFiles/test-vec.dir/testVec.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec/testVec.cxx
[ 77%] Linking CXX executable test-twistshift
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift-staggered.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o" -o test-twistshift  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 77%] Built target test-twistshift-staggered
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 77%] Building CXX object tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -MF CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o.d -o CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown/test_yupdown.cxx
[ 78%] Linking CXX executable testVec
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-vec && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vec.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-vec.dir/testVec.cxx.o" -o testVec  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 78%] Built target test-vec
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 78%] Built target build-check-mms-tests
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -MF CMakeFiles/serial_tests.dir/bout_test_main.cxx.o.d -o CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx
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/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o" -o test_yupdown  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx: In function ‘int main(int, char**)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx:29:18: warning: unused variable ‘hyprelib’ [-Wunused-variable]
   29 |   bout::HypreLib hyprelib{};
      |                  ^~~~~~~~
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field_factory.cxx
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o -MF CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o.d -o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/sys/test_timer.cxx
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   96 | #if 0 // disable temporarily until reconcile iteration space for parallel_forall  under \
      |       ^
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/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/serial_tests.dir/bout_test_main.cxx.o CMakeFiles/serial_tests.dir/field/test_field.cxx.o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o CMakeFiles/serial_tests.dir/field/test_vector3d.cxx.o CMakeFiles/serial_tests.dir/field/test_where.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_array.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_assert.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_bout_enum_class.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_deriv_store.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_generic_factory.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_macro_for_each.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_monitor.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_setters.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_vector.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_region.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_single_index_ops.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_cyclic.cxx.o CMakeFiles/serial_tests.dir/mesh/data/test_gridfromoptions.cxx.o CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solverfactory.cxx.o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o CMakeFiles/serial_tests.dir/sys/test_options.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o CMakeFiles/serial_tests.dir/test_extras.cxx.o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -o serial_tests  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../lib/libgmock.so.1.10.0 ../../lib/libbout++.so.5.0.0 ../../lib/libgtest.so.1.10.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
/usr/bin/ld: /tmp/cc8ag2Ck.ltrans106.ltrans.o: in function `testing::internal::TestFactoryImpl<OptionsNetCDFTest_WriteMultipleTimeDimensions_Test>::CreateTest()':
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make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 44%] Built target build-check-mms-tests
make  -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
ctest -R MMS- --output-on-failure
Test project /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi
    Start 52: MMS-diffusion
1/7 Test #52: MMS-diffusion ....................   Passed   11.05 sec
    Start 53: MMS-wave-1d
2/7 Test #53: MMS-wave-1d ......................   Passed   10.64 sec
    Start 54: MMS-wave-1d-y
3/7 Test #54: MMS-wave-1d-y ....................   Passed   10.67 sec
    Start 55: MMS-bracket
4/7 Test #55: MMS-bracket ......................   Passed    1.57 sec
    Start 56: MMS-derivatives3
5/7 Test #56: MMS-derivatives3 .................   Passed    1.87 sec
    Start 57: MMS-shiftedmetricinterp
6/7 Test #57: MMS-shiftedmetricinterp ..........   Passed    4.79 sec
    Start 58: MMS-upwinding3
7/7 Test #58: MMS-upwinding3 ...................   Passed    2.14 sec

100% tests passed, 0 tests failed out of 7

Total Test time (real) =  42.73 sec
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
Built target check-mms-tests
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
Built target gtest
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
Built target gmock
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'tests/unit/CMakeFiles/serial_tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
Built target serial_tests
make  -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
Built target build-check-unit-tests
make  -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/check-unit-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
ctest -R serial_tests --output-on-failure
Test project /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi
    Start 1: serial_tests
1/1 Test #1: serial_tests .....................***Failed    5.18 sec

[WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 3 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out.
Running main() from bout_test_main.cxx

[WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 3 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out.

[WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 3 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out.
Timer::resetTime
Timer name         | Total time (s) | % of top | Hits | Mean time/hit (s)
-------------------|----------------|----------|------|------------------
one                | 0.003176536    | 1.00     | 1    | 0.003176536      
two                | 0.002116488    | 0.67     | 2    | 0.001058244      
18 characters long | 2.64e-07       | 0.00     | 1    | 2.64e-07         
Calculating differential geometry terms
	Option ddx:first = C2 ()
	Option ddx:upwind = C2 ()
	Option ddy:first = C2 ()
	Option ddy:upwind = C2 ()
	Option ddz:first = C2 ()
	Option ddz:upwind = C2 ()
	Option ddy:first = C2 ()
	Option ddy:upwind = C2 ()
	Option ddx:first = C2 ()
	Option ddx:upwind = C2 ()
	Option ddy:first = C2 ()
	Option ddy:upwind = C2 ()
	Option ddz:first = C2 ()
	Option ddz:upwind = C2 ()
	Option ddy:first = C2 ()
	Option ddy:upwind = C2 ()
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field.cxx:238: Failure
Expected: getUniform(nonuniform) throws an exception of type BoutException.
  Actual: it throws fmt::v10::format_error with description "argument not found".
[  FAILED  ] FieldTest.GetUniformFalse3D (1 ms)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field.cxx:251: Failure
Expected: getUniform(nonuniform) throws an exception of type BoutException.
  Actual: it throws fmt::v10::format_error with description "argument not found".
[  FAILED  ] FieldTest.GetUniformFalse2D (0 ms)
[==========] 2158 tests from 141 test suites ran. (3732 ms total)
[  PASSED  ] 2156 tests.


0% tests passed, 1 tests failed out of 1

Total Test time (real) =   5.19 sec

The following tests FAILED:
	  1 - serial_tests (Failed)
Errors while running CTest
make[3]: *** [CMakeFiles/check-unit-tests.dir/build.make:73: CMakeFiles/check-unit-tests] Error 8
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[2]: *** [CMakeFiles/Makefile2:2743: CMakeFiles/check-unit-tests.dir/all] Error 2
make[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[1]: *** [CMakeFiles/Makefile2:2830: CMakeFiles/check.dir/rule] Error 2
make[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make: *** [Makefile:286: check] Error 2
++ exit 0
+ popd
~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/openmpi/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval 'unset MPI_COMPILER;
unset LD_LIBRARY_PATH;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_HOME;
unset MPI_FORTRAN_MOD_DIR;
unset __MODULES_LMALTNAME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SUFFIX;
unset MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset MPI_COMPILER
++ unset LD_LIBRARY_PATH
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset __MODULES_LMALTNAME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: bout++-mpich-5.0.0-11.fc40.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.tH9cYq
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ DOCDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++-mpich
+ export LC_ALL=
+ LC_ALL=
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/README.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.bib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.cff /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CHANGELOG.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++-mpich
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.hvGnnC
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ LICENSEDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/licenses/bout++-mpich
+ export LC_ALL=
+ LC_ALL=
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/licenses/bout++-mpich
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/licenses/bout++-mpich
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE.GPL /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/licenses/bout++-mpich
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: bout++-mpich = 5.0.0-11.fc40 bout++-mpich(x86-64) = 5.0.0-11.fc40 bundled(libpvode) libbout++.so.5.0.0()(64bit)(mpich-x86_64) libpvode.so.1.0.0()(64bit)(mpich-x86_64) libpvpre.so.1.0.0()(64bit)(mpich-x86_64)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/bash /usr/bin/python3 /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfftw3.so.3()(64bit) libflexiblas.so.3()(64bit) libfmt.so.10()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libnetcdf.so.19()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.19()(64bit)(mpich-x86_64) libpvode.so.1.0.0()(64bit)(mpich-x86_64) libpvpre.so.1.0.0()(64bit)(mpich-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.5()(64bit)(mpich-x86_64) libsundials_cvode.so.6()(64bit)(mpich-x86_64) libsundials_ida.so.6()(64bit)(mpich-x86_64) libsundials_nvecparallel.so.6()(64bit)(mpich-x86_64) rtld(GNU_HASH)
Recommends: environment-modules python3-boutdata python3-boututils python3-xbout
Processing files: bout++-mpich-devel-5.0.0-11.fc40.x86_64
Provides: bout++-mpich-devel = 5.0.0-11.fc40 bout++-mpich-devel(x86-64) = 5.0.0-11.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-mpich-devel make mpark-variant-devel mpich-devel netcdf-cxx4-devel netcdf-devel petsc-mpich-devel sundials-devel sundials-mpich-devel zlib-devel
Processing files: python3-bout++-mpich-5.0.0-11.fc40.x86_64
Provides: libboutpp.cpython-312-x86_64-linux-gnu.so()(64bit)(mpich-x86_64) python-bout++-mpich = 5.0.0-11.fc40 python3-bout++-mpich = 5.0.0-11.fc40 python3-bout++-mpich(x86-64) = 5.0.0-11.fc40 python3.12-bout++-mpich = 5.0.0-11.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbout++.so.5.0.0()(64bit)(mpich-x86_64) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfmt.so.10()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.12 rtld(GNU_HASH)
Recommends: python3-xbout
Processing files: bout++-openmpi-5.0.0-11.fc40.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.a4oxEX
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ DOCDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++-openmpi
+ export LC_ALL=
+ LC_ALL=
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/README.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.bib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.cff /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CHANGELOG.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/bout++-openmpi
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.W7HeLW
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ LICENSEDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/licenses/bout++-openmpi
+ export LC_ALL=
+ LC_ALL=
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/licenses/bout++-openmpi
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/licenses/bout++-openmpi
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE.GPL /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/licenses/bout++-openmpi
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: bout++-openmpi = 5.0.0-11.fc40 bout++-openmpi(x86-64) = 5.0.0-11.fc40 bundled(libpvode) libbout++.so.5.0.0()(64bit)(openmpi-x86_64) libpvode.so.1.0.0()(64bit)(openmpi-x86_64) libpvpre.so.1.0.0()(64bit)(openmpi-x86_64)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/bash /usr/bin/python3 /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfftw3.so.3()(64bit) libflexiblas.so.3()(64bit) libfmt.so.10()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmpi.so.40()(64bit)(openmpi-x86_64) libmpi_cxx.so.40()(64bit)(openmpi-x86_64) libnetcdf.so.19()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.19()(64bit)(openmpi-x86_64) libpvode.so.1.0.0()(64bit)(openmpi-x86_64) libpvpre.so.1.0.0()(64bit)(openmpi-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.5()(64bit)(openmpi-x86_64) libsundials_cvode.so.6()(64bit)(openmpi-x86_64) libsundials_ida.so.6()(64bit)(openmpi-x86_64) libsundials_nvecparallel.so.6()(64bit)(openmpi-x86_64) rtld(GNU_HASH)
Recommends: environment-modules python3-boutdata python3-boututils python3-xbout
Processing files: bout++-openmpi-devel-5.0.0-11.fc40.x86_64
Provides: bout++-openmpi-devel = 5.0.0-11.fc40 bout++-openmpi-devel(x86-64) = 5.0.0-11.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-openmpi-devel make mpark-variant-devel netcdf-cxx4-devel netcdf-devel openmpi-devel petsc-openmpi-devel sundials-devel sundials-openmpi-devel zlib-devel
Processing files: python3-bout++-openmpi-5.0.0-11.fc40.x86_64
Provides: libboutpp.cpython-312-x86_64-linux-gnu.so()(64bit)(openmpi-x86_64) python-bout++-openmpi = 5.0.0-11.fc40 python3-bout++-openmpi = 5.0.0-11.fc40 python3-bout++-openmpi(x86-64) = 5.0.0-11.fc40 python3.12-bout++-openmpi = 5.0.0-11.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbout++.so.5.0.0()(64bit)(openmpi-x86_64) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfmt.so.10()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmpi.so.40()(64bit)(openmpi-x86_64) libmpi_cxx.so.40()(64bit)(openmpi-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.12 rtld(GNU_HASH)
Recommends: python3-xbout
Processing files: bout++-common-5.0.0-11.fc40.x86_64
Provides: bout++-common = 5.0.0-11.fc40 bout++-common(x86-64) = 5.0.0-11.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: python3-bout++-5.0.0-11.fc40.noarch
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.fvwUZR
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ DOCDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/python3-bout++
+ export LC_ALL=
+ LC_ALL=
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/README.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.bib /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.cff /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CHANGELOG.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/doc/python3-bout++
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.L1c90i
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ LICENSEDIR=/builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/licenses/python3-bout++
+ export LC_ALL=
+ LC_ALL=
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/licenses/python3-bout++
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/licenses/python3-bout++
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE.GPL /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64/usr/share/licenses/python3-bout++
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: python-bout++ = 5.0.0-11.fc40 python3-bout++ = 5.0.0-11.fc40 python3.12-bout++ = 5.0.0-11.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: python3-boutdata python3-boututils python3-matplotlib python3-scipy
Processing files: bout++-doc-5.0.0-11.fc40.noarch
Provides: bout++-doc = 5.0.0-11.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: bout++-debugsource-5.0.0-11.fc40.x86_64
Provides: bout++-debugsource = 5.0.0-11.fc40 bout++-debugsource(x86-64) = 5.0.0-11.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: bout++-debuginfo-5.0.0-11.fc40.x86_64
Provides: bout++-debuginfo = 5.0.0-11.fc40 bout++-debuginfo(x86-64) = 5.0.0-11.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.0.0-11.fc40
Processing files: bout++-mpich-debuginfo-5.0.0-11.fc40.x86_64
Provides: bout++-mpich-debuginfo = 5.0.0-11.fc40 bout++-mpich-debuginfo(x86-64) = 5.0.0-11.fc40 debuginfo(build-id) = 09dc29928a2886d83a4b4f6abb649c66d9ed77e7 debuginfo(build-id) = 09fdd39f6b95577ead900f014f3c3108ba2a15ae debuginfo(build-id) = b8fa46d99089e24af0df4fa234f6a8517dcb0392
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.0.0-11.fc40
Processing files: python3-bout++-mpich-debuginfo-5.0.0-11.fc40.x86_64
Provides: debuginfo(build-id) = 67714c968632fe14d35c3f6ec2b1855d73f66673 python-bout++-mpich-debuginfo = 5.0.0-11.fc40 python3-bout++-mpich-debuginfo = 5.0.0-11.fc40 python3-bout++-mpich-debuginfo(x86-64) = 5.0.0-11.fc40 python3.12-bout++-mpich-debuginfo = 5.0.0-11.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.0.0-11.fc40
Processing files: bout++-openmpi-debuginfo-5.0.0-11.fc40.x86_64
Provides: bout++-openmpi-debuginfo = 5.0.0-11.fc40 bout++-openmpi-debuginfo(x86-64) = 5.0.0-11.fc40 debuginfo(build-id) = 258bb390607aa0664c3618298013c38024a2a6c1 debuginfo(build-id) = 35168f9066f661c73b848787de4d0b040b0c6aa8 debuginfo(build-id) = ca472674e769da22d16a90364b8a4b2a3f17ad35
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.0.0-11.fc40
Processing files: python3-bout++-openmpi-debuginfo-5.0.0-11.fc40.x86_64
Provides: debuginfo(build-id) = 8b5c030ed84963304dd4ad9b0010b3f0ded3fdac python-bout++-openmpi-debuginfo = 5.0.0-11.fc40 python3-bout++-openmpi-debuginfo = 5.0.0-11.fc40 python3-bout++-openmpi-debuginfo(x86-64) = 5.0.0-11.fc40 python3.12-bout++-openmpi-debuginfo = 5.0.0-11.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.0.0-11.fc40
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64
Wrote: /builddir/build/RPMS/bout++-mpich-debuginfo-5.0.0-11.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-openmpi-debuginfo-5.0.0-11.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-debugsource-5.0.0-11.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-openmpi-debuginfo-5.0.0-11.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-mpich-debuginfo-5.0.0-11.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-debuginfo-5.0.0-11.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-doc-5.0.0-11.fc40.noarch.rpm
Wrote: /builddir/build/RPMS/bout++-openmpi-5.0.0-11.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-mpich-5.0.0-11.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-openmpi-devel-5.0.0-11.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-mpich-devel-5.0.0-11.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-openmpi-5.0.0-11.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-5.0.0-11.fc40.noarch.rpm
Wrote: /builddir/build/RPMS/bout++-common-5.0.0-11.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-mpich-5.0.0-11.fc40.x86_64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.Z0dVt4
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/bout++-5.0.0-11.fc40.x86_64
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.eQLYIC
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea-SPECPARTS
+ rm -rf BOUT++-v5.0.0.dev10626+gd935fa1ea BOUT++-v5.0.0.dev10626+gd935fa1ea.gemspec
+ RPM_EC=0
++ jobs -p
+ exit 0
Finish: rpmbuild bout++-5.0.0-11.fc40.src.rpm
Finish: build phase for bout++-5.0.0-11.fc40.src.rpm
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-x86_64-1697538015.619643/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-x86_64-1697538015.619643/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-x86_64-1697538015.619643/root/var/log/dnf.log
INFO: Done(/var/lib/copr-rpmbuild/results/bout++-5.0.0-11.fc40.src.rpm) Config(child) 43 minutes 41 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
    "packages": [
        {
            "name": "bout++-openmpi-debuginfo",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-mpich-devel",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-common",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "x86_64"
        },
        {
            "name": "python3-bout++-openmpi",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-debuginfo",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "x86_64"
        },
        {
            "name": "python3-bout++-mpich-debuginfo",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "src"
        },
        {
            "name": "python3-bout++-mpich",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "x86_64"
        },
        {
            "name": "python3-bout++",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "noarch"
        },
        {
            "name": "bout++-openmpi-devel",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-debugsource",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-doc",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "noarch"
        },
        {
            "name": "python3-bout++-openmpi-debuginfo",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-openmpi",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-mpich-debuginfo",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-mpich",
            "epoch": null,
            "version": "5.0.0",
            "release": "11.fc40",
            "arch": "x86_64"
        }
    ]
}
RPMResults finished