Mock Version: 2.16 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-lfpy.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1645652928.425681/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.bw6bwnu4:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.bw6bwnu4:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'eb99a4f5309e4de8a5e63e9a0065ba43', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1645652928.425681/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.bw6bwnu4:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-lfpy.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1645574400 Wrote: /builddir/build/SRPMS/python-lfpy-2.2.4-1.fc37.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/python-lfpy.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1645652928.425681/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.bw6bwnu4:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.bw6bwnu4:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '726133a0a76648dab87dee8a896f75c9', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1645652928.425681/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.bw6bwnu4:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/python-lfpy.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1645574400 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.WDVrez + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf LFPy-2.2.4 + /usr/bin/gzip -dc /builddir/build/SOURCES/LFPy-2.2.4.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd LFPy-2.2.4 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + sed -i '/mpi4py/ d' setup.py ++ find . -type f -name '*.py' + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./setup.py + touch -r ./setup.py ./setup.py.new + mv ./setup.py.new ./setup.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_suppl.py + touch -r ./examples/example_suppl.py ./examples/example_suppl.py.new + mv ./examples/example_suppl.py.new ./examples/example_suppl.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_network/example_network_to_file.py + touch -r ./examples/example_network/example_network_to_file.py ./examples/example_network/example_network_to_file.py.new + mv ./examples/example_network/example_network_to_file.py.new ./examples/example_network/example_network_to_file.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_network/example_network_stim.py + touch -r ./examples/example_network/example_network_stim.py ./examples/example_network/example_network_stim.py.new + mv ./examples/example_network/example_network_stim.py.new ./examples/example_network/example_network_stim.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_network/example_network_population.py + touch -r ./examples/example_network/example_network_population.py ./examples/example_network/example_network_population.py.new + mv ./examples/example_network/example_network_population.py.new ./examples/example_network/example_network_population.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_network/example_network_cell.py + touch -r ./examples/example_network/example_network_cell.py ./examples/example_network/example_network_cell.py.new + mv ./examples/example_network/example_network_cell.py.new ./examples/example_network/example_network_cell.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_network/example_network.py + touch -r ./examples/example_network/example_network.py ./examples/example_network/example_network.py.new + mv ./examples/example_network/example_network.py.new ./examples/example_network/example_network.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_mpi_2.py + touch -r ./examples/example_mpi_2.py ./examples/example_mpi_2.py.new + mv ./examples/example_mpi_2.py.new ./examples/example_mpi_2.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_mpi.py + touch -r ./examples/example_mpi.py ./examples/example_mpi.py.new + mv ./examples/example_mpi.py.new ./examples/example_mpi.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_loadL5bPCmodelsEH.py + touch -r ./examples/example_loadL5bPCmodelsEH.py ./examples/example_loadL5bPCmodelsEH.py.new + mv ./examples/example_loadL5bPCmodelsEH.py.new ./examples/example_loadL5bPCmodelsEH.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_anisotropy.py + touch -r ./examples/example_anisotropy.py ./examples/example_anisotropy.py.new + mv ./examples/example_anisotropy.py.new ./examples/example_anisotropy.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_MEA.py + touch -r ./examples/example_MEA.py ./examples/example_MEA.py.new + mv ./examples/example_MEA.py.new ./examples/example_MEA.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_LFPyCellTemplate.py + touch -r ./examples/example_LFPyCellTemplate.py ./examples/example_LFPyCellTemplate.py.new + mv ./examples/example_LFPyCellTemplate.py.new ./examples/example_LFPyCellTemplate.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_EPFL_neurons.py + touch -r ./examples/example_EPFL_neurons.py ./examples/example_EPFL_neurons.py.new + mv ./examples/example_EPFL_neurons.py.new ./examples/example_EPFL_neurons.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_EEG.py + touch -r ./examples/example_EEG.py ./examples/example_EEG.py.new + mv ./examples/example_EEG.py.new ./examples/example_EEG.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_ECoG_4sphere.py + touch -r ./examples/example_ECoG_4sphere.py ./examples/example_ECoG_4sphere.py.new + mv ./examples/example_ECoG_4sphere.py.new ./examples/example_ECoG_4sphere.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/example_ECoG.py + touch -r ./examples/example_ECoG.py ./examples/example_ECoG.py.new + mv ./examples/example_ECoG.py.new ./examples/example_ECoG.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_7_8/figure_7_8.py + touch -r ./examples/bioRxiv281717/figure_7_8/figure_7_8.py ./examples/bioRxiv281717/figure_7_8/figure_7_8.py.new + mv ./examples/bioRxiv281717/figure_7_8/figure_7_8.py.new ./examples/bioRxiv281717/figure_7_8/figure_7_8.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_7_8/example_parallel_network_plotting.py + touch -r ./examples/bioRxiv281717/figure_7_8/example_parallel_network_plotting.py ./examples/bioRxiv281717/figure_7_8/example_parallel_network_plotting.py.new + mv ./examples/bioRxiv281717/figure_7_8/example_parallel_network_plotting.py.new ./examples/bioRxiv281717/figure_7_8/example_parallel_network_plotting.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameterspace.py + touch -r ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameterspace.py ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameterspace.py.new + mv ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameterspace.py.new ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameterspace.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameters.py + touch -r ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameters.py ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameters.py.new + mv ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameters.py.new ./examples/bioRxiv281717/figure_7_8/example_parallel_network_parameters.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_7_8/example_parallel_network_methods.py + touch -r ./examples/bioRxiv281717/figure_7_8/example_parallel_network_methods.py ./examples/bioRxiv281717/figure_7_8/example_parallel_network_methods.py.new + mv ./examples/bioRxiv281717/figure_7_8/example_parallel_network_methods.py.new ./examples/bioRxiv281717/figure_7_8/example_parallel_network_methods.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_7_8/example_parallel_network.py + touch -r ./examples/bioRxiv281717/figure_7_8/example_parallel_network.py ./examples/bioRxiv281717/figure_7_8/example_parallel_network.py.new + mv ./examples/bioRxiv281717/figure_7_8/example_parallel_network.py.new ./examples/bioRxiv281717/figure_7_8/example_parallel_network.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_6.py + touch -r ./examples/bioRxiv281717/figure_6.py ./examples/bioRxiv281717/figure_6.py.new + mv ./examples/bioRxiv281717/figure_6.py.new ./examples/bioRxiv281717/figure_6.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_5.py + touch -r ./examples/bioRxiv281717/figure_5.py ./examples/bioRxiv281717/figure_5.py.new + mv ./examples/bioRxiv281717/figure_5.py.new ./examples/bioRxiv281717/figure_5.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_4.py + touch -r ./examples/bioRxiv281717/figure_4.py ./examples/bioRxiv281717/figure_4.py.new + mv ./examples/bioRxiv281717/figure_4.py.new ./examples/bioRxiv281717/figure_4.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/figure_2.py + touch -r ./examples/bioRxiv281717/figure_2.py ./examples/bioRxiv281717/figure_2.py.new + mv ./examples/bioRxiv281717/figure_2.py.new ./examples/bioRxiv281717/figure_2.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/example_parallel_network_plotting.py + touch -r ./examples/bioRxiv281717/example_parallel_network_plotting.py ./examples/bioRxiv281717/example_parallel_network_plotting.py.new + mv ./examples/bioRxiv281717/example_parallel_network_plotting.py.new ./examples/bioRxiv281717/example_parallel_network_plotting.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/example_parallel_network_parameters.py + touch -r ./examples/bioRxiv281717/example_parallel_network_parameters.py ./examples/bioRxiv281717/example_parallel_network_parameters.py.new + mv ./examples/bioRxiv281717/example_parallel_network_parameters.py.new ./examples/bioRxiv281717/example_parallel_network_parameters.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/example_parallel_network_methods.py + touch -r ./examples/bioRxiv281717/example_parallel_network_methods.py ./examples/bioRxiv281717/example_parallel_network_methods.py.new + mv ./examples/bioRxiv281717/example_parallel_network_methods.py.new ./examples/bioRxiv281717/example_parallel_network_methods.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./examples/bioRxiv281717/example_parallel_network.py + touch -r ./examples/bioRxiv281717/example_parallel_network.py ./examples/bioRxiv281717/example_parallel_network.py.new + mv ./examples/bioRxiv281717/example_parallel_network.py.new ./examples/bioRxiv281717/example_parallel_network.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./doc/conf.py + touch -r ./doc/conf.py ./doc/conf.py.new + mv ./doc/conf.py.new ./doc/conf.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/version.py + touch -r ./LFPy/version.py ./LFPy/version.py.new + mv ./LFPy/version.py.new ./LFPy/version.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/tools.py + touch -r ./LFPy/tools.py ./LFPy/tools.py.new + mv ./LFPy/tools.py.new ./LFPy/tools.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_tools.py + touch -r ./LFPy/test/test_tools.py ./LFPy/test/test_tools.py.new + mv ./LFPy/test/test_tools.py.new ./LFPy/test/test_tools.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_templatecell.py + touch -r ./LFPy/test/test_templatecell.py ./LFPy/test/test_templatecell.py.new + mv ./LFPy/test/test_templatecell.py.new ./LFPy/test/test_templatecell.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_recextelectrode.py + touch -r ./LFPy/test/test_recextelectrode.py ./LFPy/test/test_recextelectrode.py.new + mv ./LFPy/test/test_recextelectrode.py.new ./LFPy/test/test_recextelectrode.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_pointprocess.py + touch -r ./LFPy/test/test_pointprocess.py ./LFPy/test/test_pointprocess.py.new + mv ./LFPy/test/test_pointprocess.py.new ./LFPy/test/test_pointprocess.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_networkcell.py + touch -r ./LFPy/test/test_networkcell.py ./LFPy/test/test_networkcell.py.new + mv ./LFPy/test/test_networkcell.py.new ./LFPy/test/test_networkcell.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_network.py + touch -r ./LFPy/test/test_network.py ./LFPy/test/test_network.py.new + mv ./LFPy/test/test_network.py.new ./LFPy/test/test_network.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_morphology_import.py + touch -r ./LFPy/test/test_morphology_import.py ./LFPy/test/test_morphology_import.py.new + mv ./LFPy/test/test_morphology_import.py.new ./LFPy/test/test_morphology_import.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_misc.py + touch -r ./LFPy/test/test_misc.py ./LFPy/test/test_misc.py.new + mv ./LFPy/test/test_misc.py.new ./LFPy/test/test_misc.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_lfpcalc.py + touch -r ./LFPy/test/test_lfpcalc.py ./LFPy/test/test_lfpcalc.py.new + mv ./LFPy/test/test_lfpcalc.py.new ./LFPy/test/test_lfpcalc.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_inputgenerators.py + touch -r ./LFPy/test/test_inputgenerators.py ./LFPy/test/test_inputgenerators.py.new + mv ./LFPy/test/test_inputgenerators.py.new ./LFPy/test/test_inputgenerators.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_imem.py + touch -r ./LFPy/test/test_imem.py ./LFPy/test/test_imem.py.new + mv ./LFPy/test/test_imem.py.new ./LFPy/test/test_imem.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_eegmegcalc.py + touch -r ./LFPy/test/test_eegmegcalc.py ./LFPy/test/test_eegmegcalc.py.new + mv ./LFPy/test/test_eegmegcalc.py.new ./LFPy/test/test_eegmegcalc.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_cell.py + touch -r ./LFPy/test/test_cell.py ./LFPy/test/test_cell.py.new + mv ./LFPy/test/test_cell.py.new ./LFPy/test/test_cell.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/test_alias_method.py + touch -r ./LFPy/test/test_alias_method.py ./LFPy/test/test_alias_method.py.new + mv ./LFPy/test/test_alias_method.py.new ./LFPy/test/test_alias_method.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/common.py + touch -r ./LFPy/test/common.py ./LFPy/test/common.py.new + mv ./LFPy/test/common.py.new ./LFPy/test/common.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/test/__init__.py + touch -r ./LFPy/test/__init__.py ./LFPy/test/__init__.py.new + mv ./LFPy/test/__init__.py.new ./LFPy/test/__init__.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/templatecell.py + touch -r ./LFPy/templatecell.py ./LFPy/templatecell.py.new + mv ./LFPy/templatecell.py.new ./LFPy/templatecell.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/run_simulation.py + touch -r ./LFPy/run_simulation.py ./LFPy/run_simulation.py.new + mv ./LFPy/run_simulation.py.new ./LFPy/run_simulation.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/pointprocess.py + touch -r ./LFPy/pointprocess.py ./LFPy/pointprocess.py.new + mv ./LFPy/pointprocess.py.new ./LFPy/pointprocess.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/network.py + touch -r ./LFPy/network.py ./LFPy/network.py.new + mv ./LFPy/network.py.new ./LFPy/network.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/inputgenerators.py + touch -r ./LFPy/inputgenerators.py ./LFPy/inputgenerators.py.new + mv ./LFPy/inputgenerators.py.new ./LFPy/inputgenerators.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/eegmegcalc.py + touch -r ./LFPy/eegmegcalc.py ./LFPy/eegmegcalc.py.new + mv ./LFPy/eegmegcalc.py.new ./LFPy/eegmegcalc.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/cell.py + touch -r ./LFPy/cell.py ./LFPy/cell.py.new + mv ./LFPy/cell.py.new ./LFPy/cell.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/alias_method.py + touch -r ./LFPy/alias_method.py ./LFPy/alias_method.py.new + mv ./LFPy/alias_method.py.new ./LFPy/alias_method.py + for lib in $(find . -type f -name "*.py") + sed '1{\@^#!/usr/bin/env python@d}' ./LFPy/__init__.py + touch -r ./LFPy/__init__.py ./LFPy/__init__.py.new + mv ./LFPy/__init__.py.new ./LFPy/__init__.py + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.pWMJFz + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/LFPy-2.2.4/.package_note-python-lfpy-2.2.4-1.fc37.x86_64.ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' -f /usr/lib/rpm/generate-rpm-note.sh ']' + /usr/lib/rpm/generate-rpm-note.sh python-lfpy 2.2.4-1.fc37 x86_64 + cd LFPy-2.2.4 + mkdir -p /builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/LFPy-2.2.4/.package_note-python-lfpy-2.2.4-1.fc37.x86_64.ld' + TMPDIR=/builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir + /usr/bin/python3 -m pip wheel --wheel-dir /builddir/build/BUILD/LFPy-2.2.4/pyproject-wheeldir --no-deps --use-pep517 --no-build-isolation --disable-pip-version-check --no-clean --progress-bar off --verbose . Processing /builddir/build/BUILD/LFPy-2.2.4 Preparing metadata (pyproject.toml): started Running command /usr/bin/python3 /usr/lib/python3.10/site-packages/pip/_vendor/pep517/in_process/_in_process.py prepare_metadata_for_build_wheel /builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir/tmpcodlt2s8 /builddir/build/BUILD/LFPy-2.2.4/LFPy/test Mod files: "./expsyni.mod" "./sinsyn.mod" Creating x86_64 directory for .o files. COBJS='' -> Compiling mod_func.c -> NMODL ../expsyni.mod gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I. -I/usr/include -fPIC -c mod_func.c -o mod_func.o (cd ".."; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl expsyni.mod -o "/builddir/build/BUILD/LFPy-2.2.4/LFPy/test/x86_64") -> NMODL ../sinsyn.mod (cd ".."; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl sinsyn.mod -o "/builddir/build/BUILD/LFPy-2.2.4/LFPy/test/x86_64") Translating expsyni.mod into /builddir/build/BUILD/LFPy-2.2.4/LFPy/test/x86_64/expsyni.c Thread Safe -> Compiling expsyni.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I".." -I. -I/usr/include -fPIC -c expsyni.c -o expsyni.o Translating sinsyn.mod into /builddir/build/BUILD/LFPy-2.2.4/LFPy/test/x86_64/sinsyn.c Thread Safe -> Compiling sinsyn.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I".." -I. -I/usr/include -fPIC -c sinsyn.c -o sinsyn.o expsyni.c:115:34: warning: missing braces around initializer [-Wmissing-braces] 115 | static VoidFunc hoc_intfunc[] = { | ^ 116 | 0,0 | { 117 | }; | } expsyni.c:118:38: warning: missing braces around initializer [-Wmissing-braces] 118 | static Member_func _member_func[] = { | ^ 119 | "loc", _hoc_loc_pnt, | { } 120 | "has_loc", _hoc_has_loc, | { } 121 | "get_loc", _hoc_get_loc_pnt, | { } 122 | "exp_current", _hoc_exp_current, | { } 123 | "update_queue", _hoc_update_queue, | { } 124 | 0, 0 | { 125 | }; | } expsyni.c:132:44: warning: missing braces around initializer [-Wmissing-braces] 132 | static HocParmLimits _hoc_parm_limits[] = { | ^ 133 | "tau", 1e-09, 1e+09, | { { }} 134 | 0,0,0 | { { 135 | }; | }} expsyni.c:136:42: warning: missing braces around initializer [-Wmissing-braces] 136 | static HocParmUnits _hoc_parm_units[] = { | ^ 137 | "tau", "ms", | { } 138 | "i", "nA", | { } 139 | 0,0 | { 140 | }; | } expsyni.c:142:33: warning: missing braces around initializer [-Wmissing-braces] 142 | static DoubScal hoc_scdoub[] = { | ^ 143 | 0,0 | { 144 | }; | } expsyni.c:145:31: warning: missing braces around initializer [-Wmissing-braces] 145 | static DoubVec hoc_vdoub[] = { | ^ 146 | 0,0,0 | { 147 | }; | } expsyni.c: In function ‘nrn_alloc’: expsyni.c:172:15: warning: unused variable ‘prop_ion’ [-Wunused-variable] 172 | Prop *prop_ion; | ^~~~~~~~ expsyni.c: In function ‘_expsyni_reg’: expsyni.c:201:13: warning: unused variable ‘_vectorized’ [-Wunused-variable] 201 | int _vectorized = 1; | ^~~~~~~~~~~ expsyni.c: In function ‘update_queue_ExpSynI’: expsyni.c:233:9: warning: unused variable ‘_lk’ [-Wunused-variable] 233 | double _lk ; | ^~~ expsyni.c: In function ‘_net_receive__ExpSynI’: expsyni.c:278:38: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 278 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~~ expsyni.c:278:23: warning: variable ‘_ppvar’ set but not used [-Wunused-but-set-variable] 278 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~ expsyni.c: In function ‘initmodel’: expsyni.c:293:18: warning: unused variable ‘_save’ [-Wunused-variable] 293 | int _i; double _save;{ | ^~~~~ expsyni.c:293:7: warning: unused variable ‘_i’ [-Wunused-variable] 293 | int _i; double _save;{ | ^~ expsyni.c: In function ‘_nrn_current__ExpSynI’: expsyni.c:328:11: warning: unused variable ‘_lk’ [-Wunused-variable] 328 | double _lk , _lexpired_spikes , _lx ; | ^~~ expsyni.c: In function ‘_nrn_jacob__ExpSynI’: expsyni.c:386:35: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 386 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~~ expsyni.c:386:20: warning: unused variable ‘_ppvar’ [-Wunused-variable] 386 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~ expsyni.c: In function ‘_initlists’: expsyni.c:417:6: warning: unused variable ‘_i’ [-Wunused-variable] 417 | int _i; static int _first = 1; | ^~ expsyni.c:416:21: warning: unused variable ‘_p’ [-Wunused-variable] 416 | double _x; double* _p = &_x; | ^~ sinsyn.c:115:34: warning: missing braces around initializer [-Wmissing-braces] 115 | static VoidFunc hoc_intfunc[] = { | ^ 116 | 0,0 | { 117 | }; | } sinsyn.c:118:38: warning: missing braces around initializer [-Wmissing-braces] 118 | static Member_func _member_func[] = { | ^ 119 | "loc", _hoc_loc_pnt, | { } 120 | "has_loc", _hoc_has_loc, | { } 121 | "get_loc", _hoc_get_loc_pnt, | { } 122 | 0, 0 | { 123 | }; | } sinsyn.c:128:44: warning: missing braces around initializer [-Wmissing-braces] 128 | static HocParmLimits _hoc_parm_limits[] = { | ^ 129 | 0,0,0 | { { 130 | }; | }} sinsyn.c:131:42: warning: missing braces around initializer [-Wmissing-braces] 131 | static HocParmUnits _hoc_parm_units[] = { | ^ 132 | "del", "ms", | { } 133 | "dur", "ms", | { } 134 | "pkamp", "nA", | { } 135 | "freq", "Hz", | { } 136 | "bias", "nA", | { } 137 | "i", "nA", | { } 138 | 0,0 | { 139 | }; | } sinsyn.c:141:33: warning: missing braces around initializer [-Wmissing-braces] 141 | static DoubScal hoc_scdoub[] = { | ^ 142 | "PI_SinSyn", &PI_SinSyn, | { } 143 | 0,0 | { 144 | }; | } sinsyn.c:145:31: warning: missing braces around initializer [-Wmissing-braces] 145 | static DoubVec hoc_vdoub[] = { | ^ 146 | 0,0,0 | { 147 | }; | } sinsyn.c: In function ‘nrn_alloc’: sinsyn.c:176:15: warning: unused variable ‘prop_ion’ [-Wunused-variable] 176 | Prop *prop_ion; | ^~~~~~~~ sinsyn.c: In function ‘_sinsyn_reg’: sinsyn.c:210:13: warning: unused variable ‘_vectorized’ [-Wunused-variable] 210 | int _vectorized = 1; | ^~~~~~~~~~~ sinsyn.c: In function ‘_net_receive__SinSyn’: sinsyn.c:241:38: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 241 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~~ sinsyn.c:241:23: warning: variable ‘_ppvar’ set but not used [-Wunused-but-set-variable] 241 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~ sinsyn.c: In function ‘initmodel’: sinsyn.c:248:18: warning: unused variable ‘_save’ [-Wunused-variable] 248 | int _i; double _save;{ | ^~~~~ sinsyn.c:248:7: warning: unused variable ‘_i’ [-Wunused-variable] 248 | int _i; double _save;{ | ^~ sinsyn.c: In function ‘_nrn_jacob__SinSyn’: sinsyn.c:337:35: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 337 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~~ sinsyn.c:337:20: warning: unused variable ‘_ppvar’ [-Wunused-variable] 337 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~ sinsyn.c: In function ‘_initlists’: sinsyn.c:368:6: warning: unused variable ‘_i’ [-Wunused-variable] 368 | int _i; static int _first = 1; | ^~ sinsyn.c:367:21: warning: unused variable ‘_p’ [-Wunused-variable] 367 | double _x; double* _p = &_x; | ^~ sinsyn.c: At top level: sinsyn.c:364:13: warning: ‘terminal’ defined but not used [-Wunused-function] 364 | static void terminal(){} | ^~~~~~~~ sinsyn.c:238:13: warning: ‘_modl_cleanup’ defined but not used [-Wunused-function] 238 | static void _modl_cleanup(){ _match_recurse=1;} | ^~~~~~~~~~~~~ sinsyn.c:236:12: warning: ‘_ninits’ defined but not used [-Wunused-variable] 236 | static int _ninits = 0; | ^~~~~~~ sinsyn.c:235:12: warning: ‘error’ defined but not used [-Wunused-variable] 235 | static int error; | ^~~~~ sinsyn.c:233:14: warning: ‘modelname’ defined but not used [-Wunused-variable] 233 | static char *modelname = ""; | ^~~~~~~~~ sinsyn.c:232:12: warning: ‘_reset’ defined but not used [-Wunused-variable] 232 | static int _reset; | ^~~~~~ sinsyn.c:148:16: warning: ‘_sav_indep’ defined but not used [-Wunused-variable] 148 | static double _sav_indep; | ^~~~~~~~~~ sinsyn.c:110:14: warning: ‘_hoc_setdata’ defined but not used [-Wunused-function] 110 | static void _hoc_setdata(void* _vptr) { Prop* _prop; | ^~~~~~~~~~~~ sinsyn.c:71:16: warning: ‘_extcall_thread’ defined but not used [-Wunused-variable] 71 | static Datum* _extcall_thread; | ^~~~~~~~~~~~~~~ expsyni.c: At top level: expsyni.c:413:13: warning: ‘terminal’ defined but not used [-Wunused-function] 413 | static void terminal(){} | ^~~~~~~~ expsyni.c:229:13: warning: ‘_modl_cleanup’ defined but not used [-Wunused-function] 229 | static void _modl_cleanup(){ _match_recurse=1;} | ^~~~~~~~~~~~~ expsyni.c:227:12: warning: ‘_ninits’ defined but not used [-Wunused-variable] 227 | static int _ninits = 0; | ^~~~~~~ expsyni.c:226:12: warning: ‘error’ defined but not used [-Wunused-variable] 226 | static int error; | ^~~~~ expsyni.c:224:14: warning: ‘modelname’ defined but not used [-Wunused-variable] 224 | static char *modelname = "Exponential-function synaptic current, with NET_RECEIVE"; | ^~~~~~~~~ expsyni.c:223:12: warning: ‘_reset’ defined but not used [-Wunused-variable] 223 | static int _reset; | ^~~~~~ expsyni.c:148:16: warning: ‘_sav_indep’ defined but not used [-Wunused-variable] 148 | static double _sav_indep; | ^~~~~~~~~~ expsyni.c:110:14: warning: ‘_hoc_setdata’ defined but not used [-Wunused-function] 110 | static void _hoc_setdata(void* _vptr) { Prop* _prop; | ^~~~~~~~~~~~ expsyni.c: In function ‘update_queue_ExpSynI’: expsyni.c:240:8: warning: ‘_lupdate_queue’ is used uninitialized [-Wuninitialized] 240 | return _lupdate_queue; | ^~~~~~~~~~~~~~ expsyni.c:232:11: note: ‘_lupdate_queue’ was declared here 232 | double _lupdate_queue; | ^~~~~~~~~~~~~~ sinsyn.c: In function ‘nrn_alloc’: sinsyn.c:197:23: warning: ‘_ppvar’ may be used uninitialized [-Wmaybe-uninitialized] 197 | _prop->dparam = _ppvar; | ~~~~~~~~~~~~~~^~~~~~~~ sinsyn.c:177:28: note: ‘_ppvar’ was declared here 177 | double *_p; Datum *_ppvar; | ^~~~~~ expsyni.c: In function ‘nrn_alloc’: expsyni.c:188:23: warning: ‘_ppvar’ may be used uninitialized [-Wmaybe-uninitialized] 188 | _prop->dparam = _ppvar; | ~~~~~~~~~~~~~~^~~~~~~~ expsyni.c:173:28: note: ‘_ppvar’ was declared here 173 | double *_p; Datum *_ppvar; | ^~~~~~ => LINKING shared library ./libnrnmech.so g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++11 -shared -fPIC -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -I /usr/include -o ./libnrnmech.so -Wl,-soname,libnrnmech.so \ ./mod_func.o ./expsyni.o ./sinsyn.o -L/usr/lib -lnrniv -lreadline -lcurses -lform -lpython3.10 -lX11 -lXext rm -f ./.libs/libnrnmech.so ; mkdir -p ./.libs ; cp ./libnrnmech.so ./.libs/libnrnmech.so Successfully created x86_64/special /usr/lib/python3.10/site-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( running dist_info creating /builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir/pip-modern-metadata-ij2mqv2e/LFPy.egg-info writing /builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir/pip-modern-metadata-ij2mqv2e/LFPy.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir/pip-modern-metadata-ij2mqv2e/LFPy.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir/pip-modern-metadata-ij2mqv2e/LFPy.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir/pip-modern-metadata-ij2mqv2e/LFPy.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir/pip-modern-metadata-ij2mqv2e/LFPy.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir/pip-modern-metadata-ij2mqv2e/LFPy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*' under directory 'LFPy/test/arm64' warning: no files found matching '*' under directory 'LFPy/test/aarch64' warning: no files found matching 'LFPy/test/nrnmech.dll' adding license file 'LICENSE' writing manifest file '/builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir/pip-modern-metadata-ij2mqv2e/LFPy.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir/pip-modern-metadata-ij2mqv2e/LFPy.dist-info' adding license file "LICENSE" (matched pattern "LICEN[CS]E*") Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: LFPy Building wheel for LFPy (pyproject.toml): started Running command /usr/bin/python3 /usr/lib/python3.10/site-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir/tmpc05t1is5 /builddir/build/BUILD/LFPy-2.2.4/LFPy/test Mod files: "./expsyni.mod" "./sinsyn.mod" Creating x86_64 directory for .o files. COBJS='' -> Compiling mod_func.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I. -I/usr/include -fPIC -c mod_func.c -o mod_func.o -> NMODL ../expsyni.mod -> NMODL ../sinsyn.mod (cd ".."; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl expsyni.mod -o "/builddir/build/BUILD/LFPy-2.2.4/LFPy/test/x86_64") (cd ".."; MODLUNIT=/usr/share/nrn/lib/nrnunits.lib /usr/bin/nocmodl sinsyn.mod -o "/builddir/build/BUILD/LFPy-2.2.4/LFPy/test/x86_64") Translating expsyni.mod into /builddir/build/BUILD/LFPy-2.2.4/LFPy/test/x86_64/expsyni.c Thread Safe -> Compiling expsyni.c Translating sinsyn.mod into /builddir/build/BUILD/LFPy-2.2.4/LFPy/test/x86_64/sinsyn.c Thread Safe gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I".." -I. -I/usr/include -fPIC -c expsyni.c -o expsyni.o -> Compiling sinsyn.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I".." -I. -I/usr/include -fPIC -c sinsyn.c -o sinsyn.o sinsyn.c:115:34: warning: missing braces around initializer [-Wmissing-braces] 115 | static VoidFunc hoc_intfunc[] = { | ^ 116 | 0,0 | { 117 | }; | } sinsyn.c:118:38: warning: missing braces around initializer [-Wmissing-braces] 118 | static Member_func _member_func[] = { | ^ 119 | "loc", _hoc_loc_pnt, | { } 120 | "has_loc", _hoc_has_loc, | { } 121 | "get_loc", _hoc_get_loc_pnt, | { } 122 | 0, 0 | { 123 | }; | } sinsyn.c:128:44: warning: missing braces around initializer [-Wmissing-braces] 128 | static HocParmLimits _hoc_parm_limits[] = { | ^ 129 | 0,0,0 | { { 130 | }; | }} sinsyn.c:131:42: warning: missing braces around initializer [-Wmissing-braces] 131 | static HocParmUnits _hoc_parm_units[] = { | ^ 132 | "del", "ms", | { } 133 | "dur", "ms", | { } 134 | "pkamp", "nA", | { } 135 | "freq", "Hz", | { } 136 | "bias", "nA", | { } 137 | "i", "nA", | { } 138 | 0,0 | { 139 | }; | } sinsyn.c:141:33: warning: missing braces around initializer [-Wmissing-braces] 141 | static DoubScal hoc_scdoub[] = { | ^ 142 | "PI_SinSyn", &PI_SinSyn, | { } 143 | 0,0 | { 144 | }; | } sinsyn.c:145:31: warning: missing braces around initializer [-Wmissing-braces] 145 | static DoubVec hoc_vdoub[] = { | ^ 146 | 0,0,0 | { 147 | }; | } sinsyn.c: In function ‘nrn_alloc’: sinsyn.c:176:15: warning: unused variable ‘prop_ion’ [-Wunused-variable] 176 | Prop *prop_ion; | ^~~~~~~~ sinsyn.c: In function ‘_sinsyn_reg’: sinsyn.c:210:13: warning: unused variable ‘_vectorized’ [-Wunused-variable] 210 | int _vectorized = 1; | ^~~~~~~~~~~ sinsyn.c: In function ‘_net_receive__SinSyn’: sinsyn.c:241:38: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 241 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~~ sinsyn.c:241:23: warning: variable ‘_ppvar’ set but not used [-Wunused-but-set-variable] 241 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~ sinsyn.c: In function ‘initmodel’: sinsyn.c:248:18: warning: unused variable ‘_save’ [-Wunused-variable] 248 | int _i; double _save;{ | ^~~~~ sinsyn.c:248:7: warning: unused variable ‘_i’ [-Wunused-variable] 248 | int _i; double _save;{ | ^~ sinsyn.c: In function ‘_nrn_jacob__SinSyn’: sinsyn.c:337:35: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 337 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~~ sinsyn.c:337:20: warning: unused variable ‘_ppvar’ [-Wunused-variable] 337 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~ sinsyn.c: In function ‘_initlists’: sinsyn.c:368:6: warning: unused variable ‘_i’ [-Wunused-variable] 368 | int _i; static int _first = 1; | ^~ sinsyn.c:367:21: warning: unused variable ‘_p’ [-Wunused-variable] 367 | double _x; double* _p = &_x; | ^~ sinsyn.c: At top level: sinsyn.c:364:13: warning: ‘terminal’ defined but not used [-Wunused-function] 364 | static void terminal(){} | ^~~~~~~~ sinsyn.c:238:13: warning: ‘_modl_cleanup’ defined but not used [-Wunused-function] 238 | static void _modl_cleanup(){ _match_recurse=1;} | ^~~~~~~~~~~~~ sinsyn.c:236:12: warning: ‘_ninits’ defined but not used [-Wunused-variable] 236 | static int _ninits = 0; | ^~~~~~~ sinsyn.c:235:12: warning: ‘error’ defined but not used [-Wunused-variable] 235 | static int error; | ^~~~~ sinsyn.c:233:14: warning: ‘modelname’ defined but not used [-Wunused-variable] 233 | static char *modelname = ""; | ^~~~~~~~~ sinsyn.c:232:12: warning: ‘_reset’ defined but not used [-Wunused-variable] 232 | static int _reset; | ^~~~~~ sinsyn.c:148:16: warning: ‘_sav_indep’ defined but not used [-Wunused-variable] 148 | static double _sav_indep; | ^~~~~~~~~~ sinsyn.c:110:14: warning: ‘_hoc_setdata’ defined but not used [-Wunused-function] 110 | static void _hoc_setdata(void* _vptr) { Prop* _prop; | ^~~~~~~~~~~~ sinsyn.c:71:16: warning: ‘_extcall_thread’ defined but not used [-Wunused-variable] 71 | static Datum* _extcall_thread; | ^~~~~~~~~~~~~~~ expsyni.c:115:34: warning: missing braces around initializer [-Wmissing-braces] 115 | static VoidFunc hoc_intfunc[] = { | ^ 116 | 0,0 | { 117 | }; | } expsyni.c:118:38: warning: missing braces around initializer [-Wmissing-braces] 118 | static Member_func _member_func[] = { | ^ 119 | "loc", _hoc_loc_pnt, | { } 120 | "has_loc", _hoc_has_loc, | { } 121 | "get_loc", _hoc_get_loc_pnt, | { } 122 | "exp_current", _hoc_exp_current, | { } 123 | "update_queue", _hoc_update_queue, | { } 124 | 0, 0 | { 125 | }; | } expsyni.c:132:44: warning: missing braces around initializer [-Wmissing-braces] 132 | static HocParmLimits _hoc_parm_limits[] = { | ^ 133 | "tau", 1e-09, 1e+09, | { { }} 134 | 0,0,0 | { { 135 | }; | }} expsyni.c:136:42: warning: missing braces around initializer [-Wmissing-braces] 136 | static HocParmUnits _hoc_parm_units[] = { | ^ 137 | "tau", "ms", | { } 138 | "i", "nA", | { } 139 | 0,0 | { 140 | }; | } expsyni.c:142:33: warning: missing braces around initializer [-Wmissing-braces] 142 | static DoubScal hoc_scdoub[] = { | ^ 143 | 0,0 | { 144 | }; | } expsyni.c:145:31: warning: missing braces around initializer [-Wmissing-braces] 145 | static DoubVec hoc_vdoub[] = { | ^ 146 | 0,0,0 | { 147 | }; | } expsyni.c: In function ‘nrn_alloc’: expsyni.c:172:15: warning: unused variable ‘prop_ion’ [-Wunused-variable] 172 | Prop *prop_ion; | ^~~~~~~~ expsyni.c: In function ‘_expsyni_reg’: expsyni.c:201:13: warning: unused variable ‘_vectorized’ [-Wunused-variable] 201 | int _vectorized = 1; | ^~~~~~~~~~~ expsyni.c: In function ‘update_queue_ExpSynI’: expsyni.c:233:9: warning: unused variable ‘_lk’ [-Wunused-variable] 233 | double _lk ; | ^~~ expsyni.c: In function ‘_net_receive__ExpSynI’: expsyni.c:278:38: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 278 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~~ expsyni.c:278:23: warning: variable ‘_ppvar’ set but not used [-Wunused-but-set-variable] 278 | { double* _p; Datum* _ppvar; Datum* _thread; _NrnThread* _nt; | ^~~~~~ expsyni.c: In function ‘initmodel’: expsyni.c:293:18: warning: unused variable ‘_save’ [-Wunused-variable] 293 | int _i; double _save;{ | ^~~~~ expsyni.c:293:7: warning: unused variable ‘_i’ [-Wunused-variable] 293 | int _i; double _save;{ | ^~ expsyni.c: In function ‘_nrn_current__ExpSynI’: expsyni.c:328:11: warning: unused variable ‘_lk’ [-Wunused-variable] 328 | double _lk , _lexpired_spikes , _lx ; | ^~~ expsyni.c: In function ‘_nrn_jacob__ExpSynI’: expsyni.c:386:35: warning: variable ‘_thread’ set but not used [-Wunused-but-set-variable] 386 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~~ expsyni.c:386:20: warning: unused variable ‘_ppvar’ [-Wunused-variable] 386 | double* _p; Datum* _ppvar; Datum* _thread; | ^~~~~~ expsyni.c: In function ‘_initlists’: expsyni.c:417:6: warning: unused variable ‘_i’ [-Wunused-variable] 417 | int _i; static int _first = 1; | ^~ expsyni.c:416:21: warning: unused variable ‘_p’ [-Wunused-variable] 416 | double _x; double* _p = &_x; | ^~ expsyni.c: At top level: expsyni.c:413:13: warning: ‘terminal’ defined but not used [-Wunused-function] 413 | static void terminal(){} | ^~~~~~~~ expsyni.c:229:13: warning: ‘_modl_cleanup’ defined but not used [-Wunused-function] 229 | static void _modl_cleanup(){ _match_recurse=1;} | ^~~~~~~~~~~~~ expsyni.c:227:12: warning: ‘_ninits’ defined but not used [-Wunused-variable] 227 | static int _ninits = 0; | ^~~~~~~ expsyni.c:226:12: warning: ‘error’ defined but not used [-Wunused-variable] 226 | static int error; | ^~~~~ expsyni.c:224:14: warning: ‘modelname’ defined but not used [-Wunused-variable] 224 | static char *modelname = "Exponential-function synaptic current, with NET_RECEIVE"; | ^~~~~~~~~ expsyni.c:223:12: warning: ‘_reset’ defined but not used [-Wunused-variable] 223 | static int _reset; | ^~~~~~ expsyni.c:148:16: warning: ‘_sav_indep’ defined but not used [-Wunused-variable] 148 | static double _sav_indep; | ^~~~~~~~~~ expsyni.c:110:14: warning: ‘_hoc_setdata’ defined but not used [-Wunused-function] 110 | static void _hoc_setdata(void* _vptr) { Prop* _prop; | ^~~~~~~~~~~~ expsyni.c: In function ‘update_queue_ExpSynI’: expsyni.c:240:8: warning: ‘_lupdate_queue’ is used uninitialized [-Wuninitialized] 240 | return _lupdate_queue; | ^~~~~~~~~~~~~~ expsyni.c:232:11: note: ‘_lupdate_queue’ was declared here 232 | double _lupdate_queue; | ^~~~~~~~~~~~~~ sinsyn.c: In function ‘nrn_alloc’: sinsyn.c:197:23: warning: ‘_ppvar’ may be used uninitialized [-Wmaybe-uninitialized] 197 | _prop->dparam = _ppvar; | ~~~~~~~~~~~~~~^~~~~~~~ sinsyn.c:177:28: note: ‘_ppvar’ was declared here 177 | double *_p; Datum *_ppvar; | ^~~~~~ expsyni.c: In function ‘nrn_alloc’: expsyni.c:188:23: warning: ‘_ppvar’ may be used uninitialized [-Wmaybe-uninitialized] 188 | _prop->dparam = _ppvar; | ~~~~~~~~~~~~~~^~~~~~~~ expsyni.c:173:28: note: ‘_ppvar’ was declared here 173 | double *_p; Datum *_ppvar; | ^~~~~~ => LINKING shared library ./libnrnmech.so g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -std=c++11 -shared -fPIC -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -I /usr/include -o ./libnrnmech.so -Wl,-soname,libnrnmech.so \ ./mod_func.o ./expsyni.o ./sinsyn.o -L/usr/lib -lnrniv -lreadline -lcurses -lform -lpython3.10 -lX11 -lXext rm -f ./.libs/libnrnmech.so ; mkdir -p ./.libs ; cp ./libnrnmech.so ./.libs/libnrnmech.so Successfully created x86_64/special /usr/lib/python3.10/site-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( running bdist_wheel running build running build_py creating build creating build/lib.linux-x86_64-3.10 creating build/lib.linux-x86_64-3.10/LFPy copying LFPy/__init__.py -> build/lib.linux-x86_64-3.10/LFPy copying LFPy/alias_method.py -> build/lib.linux-x86_64-3.10/LFPy copying LFPy/cell.py -> build/lib.linux-x86_64-3.10/LFPy copying LFPy/eegmegcalc.py -> build/lib.linux-x86_64-3.10/LFPy copying LFPy/inputgenerators.py -> build/lib.linux-x86_64-3.10/LFPy copying LFPy/network.py -> build/lib.linux-x86_64-3.10/LFPy copying LFPy/pointprocess.py -> build/lib.linux-x86_64-3.10/LFPy copying LFPy/run_simulation.py -> build/lib.linux-x86_64-3.10/LFPy copying LFPy/templatecell.py -> build/lib.linux-x86_64-3.10/LFPy copying LFPy/tools.py -> build/lib.linux-x86_64-3.10/LFPy copying LFPy/version.py -> build/lib.linux-x86_64-3.10/LFPy running egg_info writing LFPy.egg-info/PKG-INFO writing dependency_links to LFPy.egg-info/dependency_links.txt writing requirements to LFPy.egg-info/requires.txt writing top-level names to LFPy.egg-info/top_level.txt reading manifest file 'LFPy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*' under directory 'LFPy/test/arm64' warning: no files found matching '*' under directory 'LFPy/test/aarch64' warning: no files found matching 'LFPy/test/nrnmech.dll' adding license file 'LICENSE' writing manifest file 'LFPy.egg-info/SOURCES.txt' copying LFPy/alias_method.pyx -> build/lib.linux-x86_64-3.10/LFPy copying LFPy/run_simulation.pyx -> build/lib.linux-x86_64-3.10/LFPy creating build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/L23E_p23.hoc -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/__init__.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/ball_and_stick_template.hoc -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/ball_and_sticks.hoc -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/ball_and_sticks_w_lists.hoc -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/common.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/expsyni.mod -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/fem_mix_dip.npz -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/sinsyn.mod -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/stick.hoc -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/stick_template.hoc -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/sticks_not_connected_head_to_toe.hoc -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/test_alias_method.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/test_cell.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/test_eegmegcalc.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/test_imem.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/test_inputgenerators.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/test_lfpcalc.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/test_misc.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/test_morphology_import.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/test_network.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/test_networkcell.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/test_pointprocess.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/test_recextelectrode.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/test_templatecell.py -> build/lib.linux-x86_64-3.10/LFPy/test copying LFPy/test/test_tools.py -> build/lib.linux-x86_64-3.10/LFPy/test creating build/lib.linux-x86_64-3.10/LFPy/test/x86_64 copying LFPy/test/x86_64/expsyni.c -> build/lib.linux-x86_64-3.10/LFPy/test/x86_64 copying LFPy/test/x86_64/expsyni.o -> build/lib.linux-x86_64-3.10/LFPy/test/x86_64 copying LFPy/test/x86_64/libnrnmech.so -> build/lib.linux-x86_64-3.10/LFPy/test/x86_64 copying LFPy/test/x86_64/makemod2c_inc -> build/lib.linux-x86_64-3.10/LFPy/test/x86_64 copying LFPy/test/x86_64/mod_func.c -> build/lib.linux-x86_64-3.10/LFPy/test/x86_64 copying LFPy/test/x86_64/mod_func.o -> build/lib.linux-x86_64-3.10/LFPy/test/x86_64 copying LFPy/test/x86_64/sinsyn.c -> build/lib.linux-x86_64-3.10/LFPy/test/x86_64 copying LFPy/test/x86_64/sinsyn.o -> build/lib.linux-x86_64-3.10/LFPy/test/x86_64 copying LFPy/test/x86_64/special -> build/lib.linux-x86_64-3.10/LFPy/test/x86_64 creating build/lib.linux-x86_64-3.10/LFPy/test/x86_64/.libs copying LFPy/test/x86_64/.libs/libnrnmech.so -> build/lib.linux-x86_64-3.10/LFPy/test/x86_64/.libs running build_ext cythoning LFPy/run_simulation.pyx to LFPy/run_simulation.c cythoning LFPy/alias_method.pyx to LFPy/alias_method.c building 'LFPy.run_simulation' extension creating build/temp.linux-x86_64-3.10 creating build/temp.linux-x86_64-3.10/LFPy gcc -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.10/site-packages/numpy/core/include -I/usr/include/python3.10 -c LFPy/run_simulation.c -o build/temp.linux-x86_64-3.10/LFPy/run_simulation.o In file included from /usr/lib64/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1960, from /usr/lib64/python3.10/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.10/site-packages/numpy/core/include/numpy/arrayobject.h:5, from LFPy/run_simulation.c:681: /usr/lib64/python3.10/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/LFPy-2.2.4/.package_note-python-lfpy-2.2.4-1.fc37.x86_64.ld -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-3.10/LFPy/run_simulation.o -L/usr/lib64 -o build/lib.linux-x86_64-3.10/LFPy/run_simulation.cpython-310-x86_64-linux-gnu.so building 'LFPy.alias_method' extension gcc -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fPIC -I/usr/lib64/python3.10/site-packages/numpy/core/include -I/usr/include/python3.10 -c LFPy/alias_method.c -o build/temp.linux-x86_64-3.10/LFPy/alias_method.o In file included from /usr/lib64/python3.10/site-packages/numpy/core/include/numpy/ndarraytypes.h:1960, from /usr/lib64/python3.10/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib64/python3.10/site-packages/numpy/core/include/numpy/arrayobject.h:5, from LFPy/alias_method.c:681: /usr/lib64/python3.10/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/LFPy-2.2.4/.package_note-python-lfpy-2.2.4-1.fc37.x86_64.ld -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection build/temp.linux-x86_64-3.10/LFPy/alias_method.o -L/usr/lib64 -o build/lib.linux-x86_64-3.10/LFPy/alias_method.cpython-310-x86_64-linux-gnu.so installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/LFPy copying build/lib.linux-x86_64-3.10/LFPy/alias_method.cpython-310-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/LFPy copying build/lib.linux-x86_64-3.10/LFPy/run_simulation.cpython-310-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/LFPy creating build/bdist.linux-x86_64/wheel/LFPy/test creating build/bdist.linux-x86_64/wheel/LFPy/test/x86_64 creating build/bdist.linux-x86_64/wheel/LFPy/test/x86_64/.libs copying build/lib.linux-x86_64-3.10/LFPy/test/x86_64/.libs/libnrnmech.so -> build/bdist.linux-x86_64/wheel/LFPy/test/x86_64/.libs copying build/lib.linux-x86_64-3.10/LFPy/test/x86_64/special -> build/bdist.linux-x86_64/wheel/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.10/LFPy/test/x86_64/sinsyn.o -> build/bdist.linux-x86_64/wheel/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.10/LFPy/test/x86_64/sinsyn.c -> build/bdist.linux-x86_64/wheel/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.10/LFPy/test/x86_64/mod_func.o -> build/bdist.linux-x86_64/wheel/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.10/LFPy/test/x86_64/mod_func.c -> build/bdist.linux-x86_64/wheel/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.10/LFPy/test/x86_64/makemod2c_inc -> build/bdist.linux-x86_64/wheel/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.10/LFPy/test/x86_64/libnrnmech.so -> build/bdist.linux-x86_64/wheel/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.10/LFPy/test/x86_64/expsyni.o -> build/bdist.linux-x86_64/wheel/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.10/LFPy/test/x86_64/expsyni.c -> build/bdist.linux-x86_64/wheel/LFPy/test/x86_64 copying build/lib.linux-x86_64-3.10/LFPy/test/test_tools.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/test_templatecell.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/test_recextelectrode.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/test_pointprocess.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/test_networkcell.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/test_network.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/test_morphology_import.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/test_misc.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/test_lfpcalc.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/test_inputgenerators.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/test_imem.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/test_eegmegcalc.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/test_cell.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/test_alias_method.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/sticks_not_connected_head_to_toe.hoc -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/stick_template.hoc -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/stick.hoc -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/sinsyn.mod -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/fem_mix_dip.npz -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/expsyni.mod -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/common.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/ball_and_sticks_w_lists.hoc -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/ball_and_sticks.hoc -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/ball_and_stick_template.hoc -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/__init__.py -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/test/L23E_p23.hoc -> build/bdist.linux-x86_64/wheel/LFPy/test copying build/lib.linux-x86_64-3.10/LFPy/run_simulation.pyx -> build/bdist.linux-x86_64/wheel/LFPy copying build/lib.linux-x86_64-3.10/LFPy/alias_method.pyx -> build/bdist.linux-x86_64/wheel/LFPy copying build/lib.linux-x86_64-3.10/LFPy/version.py -> build/bdist.linux-x86_64/wheel/LFPy copying build/lib.linux-x86_64-3.10/LFPy/tools.py -> build/bdist.linux-x86_64/wheel/LFPy copying build/lib.linux-x86_64-3.10/LFPy/templatecell.py -> build/bdist.linux-x86_64/wheel/LFPy copying build/lib.linux-x86_64-3.10/LFPy/run_simulation.py -> build/bdist.linux-x86_64/wheel/LFPy copying build/lib.linux-x86_64-3.10/LFPy/pointprocess.py -> build/bdist.linux-x86_64/wheel/LFPy copying build/lib.linux-x86_64-3.10/LFPy/network.py -> build/bdist.linux-x86_64/wheel/LFPy copying build/lib.linux-x86_64-3.10/LFPy/inputgenerators.py -> build/bdist.linux-x86_64/wheel/LFPy copying build/lib.linux-x86_64-3.10/LFPy/eegmegcalc.py -> build/bdist.linux-x86_64/wheel/LFPy copying build/lib.linux-x86_64-3.10/LFPy/cell.py -> build/bdist.linux-x86_64/wheel/LFPy copying build/lib.linux-x86_64-3.10/LFPy/alias_method.py -> build/bdist.linux-x86_64/wheel/LFPy copying build/lib.linux-x86_64-3.10/LFPy/__init__.py -> build/bdist.linux-x86_64/wheel/LFPy running install_egg_info Copying LFPy.egg-info to build/bdist.linux-x86_64/wheel/LFPy-2.2.4-py3.10.egg-info running install_scripts adding license file "LICENSE" (matched pattern "LICEN[CS]E*") creating build/bdist.linux-x86_64/wheel/LFPy-2.2.4.dist-info/WHEEL creating '/builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir/pip-wheel-f5x3mlbh/tmpsfvavcyy/LFPy-2.2.4-cp310-cp310-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'LFPy/__init__.py' adding 'LFPy/alias_method.cpython-310-x86_64-linux-gnu.so' adding 'LFPy/alias_method.py' adding 'LFPy/alias_method.pyx' adding 'LFPy/cell.py' adding 'LFPy/eegmegcalc.py' adding 'LFPy/inputgenerators.py' adding 'LFPy/network.py' adding 'LFPy/pointprocess.py' adding 'LFPy/run_simulation.cpython-310-x86_64-linux-gnu.so' adding 'LFPy/run_simulation.py' adding 'LFPy/run_simulation.pyx' adding 'LFPy/templatecell.py' adding 'LFPy/tools.py' adding 'LFPy/version.py' adding 'LFPy/test/L23E_p23.hoc' adding 'LFPy/test/__init__.py' adding 'LFPy/test/ball_and_stick_template.hoc' adding 'LFPy/test/ball_and_sticks.hoc' adding 'LFPy/test/ball_and_sticks_w_lists.hoc' adding 'LFPy/test/common.py' adding 'LFPy/test/expsyni.mod' adding 'LFPy/test/fem_mix_dip.npz' adding 'LFPy/test/sinsyn.mod' adding 'LFPy/test/stick.hoc' adding 'LFPy/test/stick_template.hoc' adding 'LFPy/test/sticks_not_connected_head_to_toe.hoc' adding 'LFPy/test/test_alias_method.py' adding 'LFPy/test/test_cell.py' adding 'LFPy/test/test_eegmegcalc.py' adding 'LFPy/test/test_imem.py' adding 'LFPy/test/test_inputgenerators.py' adding 'LFPy/test/test_lfpcalc.py' adding 'LFPy/test/test_misc.py' adding 'LFPy/test/test_morphology_import.py' adding 'LFPy/test/test_network.py' adding 'LFPy/test/test_networkcell.py' adding 'LFPy/test/test_pointprocess.py' adding 'LFPy/test/test_recextelectrode.py' adding 'LFPy/test/test_templatecell.py' adding 'LFPy/test/test_tools.py' adding 'LFPy/test/x86_64/expsyni.c' adding 'LFPy/test/x86_64/expsyni.o' adding 'LFPy/test/x86_64/libnrnmech.so' adding 'LFPy/test/x86_64/makemod2c_inc' adding 'LFPy/test/x86_64/mod_func.c' adding 'LFPy/test/x86_64/mod_func.o' adding 'LFPy/test/x86_64/sinsyn.c' adding 'LFPy/test/x86_64/sinsyn.o' adding 'LFPy/test/x86_64/special' adding 'LFPy/test/x86_64/.libs/libnrnmech.so' adding 'LFPy-2.2.4.dist-info/LICENSE' adding 'LFPy-2.2.4.dist-info/METADATA' adding 'LFPy-2.2.4.dist-info/WHEEL' adding 'LFPy-2.2.4.dist-info/top_level.txt' adding 'LFPy-2.2.4.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for LFPy (pyproject.toml): finished with status 'done' Created wheel for LFPy: filename=LFPy-2.2.4-cp310-cp310-linux_x86_64.whl size=672487 sha256=821ea81423663fd2059fabcf200d529204113f09efbaac16dfbc73b6fc03fbb6 Stored in directory: /builddir/.cache/pip/wheels/55/81/d6/53b12835015082a06b7117ac351c989afa2fc76050056d1f5b Successfully built LFPy + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.UKHdhv + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64 ++ dirname /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/LFPy-2.2.4/.package_note-python-lfpy-2.2.4-1.fc37.x86_64.ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd LFPy-2.2.4 ++ ls /builddir/build/BUILD/LFPy-2.2.4/pyproject-wheeldir/LFPy-2.2.4-cp310-cp310-linux_x86_64.whl ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' ++ xargs basename --multiple + specifier=LFPy==2.2.4 + TMPDIR=/builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64 --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/LFPy-2.2.4/pyproject-wheeldir LFPy==2.2.4 Using pip 21.3.1 from /usr/lib/python3.10/site-packages/pip (python 3.10) Looking in links: /builddir/build/BUILD/LFPy-2.2.4/pyproject-wheeldir Processing ./pyproject-wheeldir/LFPy-2.2.4-cp310-cp310-linux_x86_64.whl Installing collected packages: LFPy Successfully installed LFPy-2.2.4 + '[' -d /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/bin ']' + rm -f /builddir/build/BUILD/pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib/python3.10/site-packages ']' + '[' /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages '!=' /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib/python3.10/site-packages ']' + '[' -d /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages ']' + site_dirs+=("/usr/lib64/python3.10/site-packages") + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64$site_dir/*.dist-info + echo '%ghost /usr/lib64/python3.10/site-packages/LFPy-2.2.4.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy-2.2.4.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64 --record /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy-2.2.4.dist-info/RECORD --output /builddir/build/BUILD/pyproject-record + rm -fv /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy-2.2.4.dist-info/RECORD removed '/builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy-2.2.4.dist-info/RECORD' + rm -fv /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy-2.2.4.dist-info/REQUESTED removed '/builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy-2.2.4.dist-info/REQUESTED' ++ cut -f1 '-d ' ++ wc -l /builddir/build/BUILD/pyproject-ghost-distinfo + lines=1 + '[' 1 -ne 1 ']' + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/pyproject-files --output-modules /builddir/build/BUILD/pyproject-modules --buildroot /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64 --sitelib /usr/lib/python3.10/site-packages --sitearch /usr/lib64/python3.10/site-packages --python-version 3.10 --pyproject-record /builddir/build/BUILD/pyproject-record --prefix /usr LFPy + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2.2.4-1.fc37 --unique-debug-suffix -2.2.4-1.fc37.x86_64 --unique-debug-src-base python-lfpy-2.2.4-1.fc37.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/LFPy-2.2.4 extracting debug info from /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy/alias_method.cpython-310-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy/run_simulation.cpython-310-x86_64-linux-gnu.so extracting debug info from /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy/test/x86_64/.libs/libnrnmech.so extracting debug info from /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy/test/x86_64/libnrnmech.so original debug info size: 840kB, size after compression: 788kB /usr/bin/sepdebugcrcfix: Updated 4 CRC32s, 0 CRC32s did match. 1697 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/lib64/python3.10/site-packages/LFPy/test/x86_64/special from /bin/sh to #!/usr/bin/sh + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib/debug/usr/lib64/python3.10 using python3.10 Bytecompiling .py files below /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10 using python3.10 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.vAFLl5 + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/LFPy-2.2.4/.package_note-python-lfpy-2.2.4-1.fc37.x86_64.ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' -f /usr/lib/rpm/generate-rpm-note.sh ']' + /usr/lib/rpm/generate-rpm-note.sh python-lfpy 2.2.4-1.fc37 x86_64 + cd LFPy-2.2.4 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec READLINK_CMD /usr/bin/readlink readlink ++ Nm=READLINK_CMD ++ confPath=/usr/bin/readlink ++ execNm=readlink ++ eval READLINK_CMD=/usr/bin/readlink +++ READLINK_CMD=/usr/bin/readlink ++ '[' '!' -x /usr/bin/readlink ']' ++ unset Nm confPath execNm ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec ++ '[' -f /proc/1252/exe ']' +++ /usr/bin/readlink /proc/1252/exe ++ my_shell=/usr/bin/bash +++ /usr/bin/expr /usr/bin/bash : '-*\(.*\)' ++ my_shell=/usr/bin/bash +++ /usr/bin/basename /usr/bin/bash ++ my_shell=bash ++ case ${my_shell} in ++ '[' -f /usr/share/lmod/lmod/init/bash ']' ++ . /usr/share/lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/share/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE READLINK_CMD + module load mpi/mpich-x86_64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/LFPy-2.2.4/.package_note-python-lfpy-2.2.4-1.fc37.x86_64.ld' + PATH=/builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/bin:/usr/lib64/mpich/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages:/builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib/python3.10/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir' + /usr/bin/pytest LFPy/test/ ============================= test session starts ============================== platform linux -- Python 3.10.2, pytest-6.2.5, py-1.11.0, pluggy-1.0.0 rootdir: /builddir/build/BUILD/LFPy-2.2.4 collected 304 items LFPy/test/test_alias_method.py ..... [ 1%] LFPy/test/test_cell.py ................................................. [ 17%] ................................. [ 28%] LFPy/test/test_eegmegcalc.py .................................... [ 40%] LFPy/test/test_imem.py ..... [ 42%] LFPy/test/test_inputgenerators.py . [ 42%] LFPy/test/test_lfpcalc.py ...................... [ 49%] LFPy/test/test_misc.py .. [ 50%] LFPy/test/test_morphology_import.py . [ 50%] LFPy/test/test_network.py ........ [ 53%] LFPy/test/test_networkcell.py .......................................... [ 67%] ............... [ 72%] LFPy/test/test_pointprocess.py ........... [ 75%] LFPy/test/test_recextelectrode.py ............... [ 80%] LFPy/test/test_templatecell.py ......................................... [ 94%] ................ [ 99%] LFPy/test/test_tools.py .. [100%] =============================== warnings summary =============================== ../../../../usr/lib/python3.10/site-packages/MEAutility/core.py:21 /usr/lib/python3.10/site-packages/MEAutility/core.py:21: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives from distutils.version import StrictVersion ../../../../usr/lib64/python3.10/site-packages/numpy/distutils/ccompiler.py:17 /usr/lib64/python3.10/site-packages/numpy/distutils/ccompiler.py:17: DeprecationWarning: The distutils.sysconfig module is deprecated, use sysconfig instead from distutils.sysconfig import customize_compiler LFPy/network.py:1005 /builddir/build/BUILD/LFPy-2.2.4/LFPy/network.py:1005: DeprecationWarning: invalid escape sequence '\s' """ LFPy/test/test_cell.py::testCell::test_cell_get_axial_currents_from_vmem_12 LFPy/test/test_cell.py::testCell::test_get_multi_current_dipole_moments_04 LFPy/test/test_eegmegcalc.py::testInfiniteVolumeConductor::test_get_multi_dipole_potential01 /builddir/build/BUILD/LFPy-2.2.4/LFPy/cell.py:182: UserWarning: 0 sections detected! Consider setting 'delete_sections=True' warn(mssg) LFPy/test/test_cell.py::testCell::test_cell_get_axial_currents_from_vmem_13 LFPy/test/test_eegmegcalc.py::testInfiniteVolumeConductor::test_get_multi_dipole_potential02 /builddir/build/BUILD/LFPy-2.2.4/LFPy/cell.py:182: UserWarning: 4 sections detected! Consider setting 'delete_sections=True' warn(mssg) -- Docs: https://docs.pytest.org/en/stable/warnings.html ================== 304 passed, 8 warnings in 80.34s (0:01:20) ================== + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec READLINK_CMD /usr/bin/readlink readlink ++ Nm=READLINK_CMD ++ confPath=/usr/bin/readlink ++ execNm=readlink ++ eval READLINK_CMD=/usr/bin/readlink +++ READLINK_CMD=/usr/bin/readlink ++ '[' '!' -x /usr/bin/readlink ']' ++ unset Nm confPath execNm ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec ++ '[' -f /proc/1252/exe ']' +++ /usr/bin/readlink /proc/1252/exe ++ my_shell=/usr/bin/bash +++ /usr/bin/expr /usr/bin/bash : '-*\(.*\)' ++ my_shell=/usr/bin/bash +++ /usr/bin/basename /usr/bin/bash ++ my_shell=bash ++ case ${my_shell} in ++ '[' -f /usr/share/lmod/lmod/init/bash ']' ++ . /usr/share/lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/share/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE READLINK_CMD + module unload mpi/mpich-x86_64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec READLINK_CMD /usr/bin/readlink readlink ++ Nm=READLINK_CMD ++ confPath=/usr/bin/readlink ++ execNm=readlink ++ eval READLINK_CMD=/usr/bin/readlink +++ READLINK_CMD=/usr/bin/readlink ++ '[' '!' -x /usr/bin/readlink ']' ++ unset Nm confPath execNm ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec ++ '[' -f /proc/1252/exe ']' +++ /usr/bin/readlink /proc/1252/exe ++ my_shell=/usr/bin/bash +++ /usr/bin/expr /usr/bin/bash : '-*\(.*\)' ++ my_shell=/usr/bin/bash +++ /usr/bin/basename /usr/bin/bash ++ my_shell=bash ++ case ${my_shell} in ++ '[' -f /usr/share/lmod/lmod/init/bash ']' ++ . /usr/share/lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/share/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE READLINK_CMD + module load mpi/openmpi-x86_64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + export OMPI_MCA_rmaps_base_oversubscribe=1 + OMPI_MCA_rmaps_base_oversubscribe=1 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/LFPy-2.2.4/.package_note-python-lfpy-2.2.4-1.fc37.x86_64.ld' + PATH=/builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/bin:/usr/lib64/openmpi/bin:/builddir/.local/bin:/builddir/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages:/builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib/python3.10/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/LFPy-2.2.4/.pyproject-builddir' + /usr/bin/pytest LFPy/test/ ============================= test session starts ============================== platform linux -- Python 3.10.2, pytest-6.2.5, py-1.11.0, pluggy-1.0.0 rootdir: /builddir/build/BUILD/LFPy-2.2.4 collected 304 items LFPy/test/test_alias_method.py ..... [ 1%] LFPy/test/test_cell.py ................................................. [ 17%] ................................. [ 28%] LFPy/test/test_eegmegcalc.py .................................... [ 40%] LFPy/test/test_imem.py ..... [ 42%] LFPy/test/test_inputgenerators.py . [ 42%] LFPy/test/test_lfpcalc.py ...................... [ 49%] LFPy/test/test_misc.py .. [ 50%] LFPy/test/test_morphology_import.py . [ 50%] LFPy/test/test_network.py ........ [ 53%] LFPy/test/test_networkcell.py .......................................... [ 67%] ............... [ 72%] LFPy/test/test_pointprocess.py ........... [ 75%] LFPy/test/test_recextelectrode.py ............... [ 80%] LFPy/test/test_templatecell.py ......................................... [ 94%] ................ [ 99%] LFPy/test/test_tools.py .. [100%] =============================== warnings summary =============================== ../../../../usr/lib/python3.10/site-packages/MEAutility/core.py:21 /usr/lib/python3.10/site-packages/MEAutility/core.py:21: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives from distutils.version import StrictVersion ../../../../usr/lib64/python3.10/site-packages/numpy/distutils/ccompiler.py:17 /usr/lib64/python3.10/site-packages/numpy/distutils/ccompiler.py:17: DeprecationWarning: The distutils.sysconfig module is deprecated, use sysconfig instead from distutils.sysconfig import customize_compiler LFPy/network.py:1005 /builddir/build/BUILD/LFPy-2.2.4/LFPy/network.py:1005: DeprecationWarning: invalid escape sequence '\s' """ LFPy/test/test_cell.py::testCell::test_cell_get_axial_currents_from_vmem_12 LFPy/test/test_cell.py::testCell::test_get_multi_current_dipole_moments_04 LFPy/test/test_eegmegcalc.py::testInfiniteVolumeConductor::test_get_multi_dipole_potential01 /builddir/build/BUILD/LFPy-2.2.4/LFPy/cell.py:182: UserWarning: 0 sections detected! Consider setting 'delete_sections=True' warn(mssg) LFPy/test/test_cell.py::testCell::test_cell_get_axial_currents_from_vmem_13 LFPy/test/test_eegmegcalc.py::testInfiniteVolumeConductor::test_get_multi_dipole_potential02 /builddir/build/BUILD/LFPy-2.2.4/LFPy/cell.py:182: UserWarning: 4 sections detected! Consider setting 'delete_sections=True' warn(mssg) -- Docs: https://docs.pytest.org/en/stable/warnings.html ================== 304 passed, 8 warnings in 81.55s (0:01:21) ================== + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec READLINK_CMD /usr/bin/readlink readlink ++ Nm=READLINK_CMD ++ confPath=/usr/bin/readlink ++ execNm=readlink ++ eval READLINK_CMD=/usr/bin/readlink +++ READLINK_CMD=/usr/bin/readlink ++ '[' '!' -x /usr/bin/readlink ']' ++ unset Nm confPath execNm ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec ++ '[' -f /proc/1252/exe ']' +++ /usr/bin/readlink /proc/1252/exe ++ my_shell=/usr/bin/bash +++ /usr/bin/expr /usr/bin/bash : '-*\(.*\)' ++ my_shell=/usr/bin/bash +++ /usr/bin/basename /usr/bin/bash ++ my_shell=bash ++ case ${my_shell} in ++ '[' -f /usr/share/lmod/lmod/init/bash ']' ++ . /usr/share/lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/share/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE READLINK_CMD + module unload mpi/openmpi-x86_64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-lfpy-2.2.4-1.fc37.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.GJCO3V + umask 022 + cd /builddir/build/BUILD + cd LFPy-2.2.4 + DOCDIR=/builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/share/doc/python3-lfpy + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/share/doc/python3-lfpy + cp -pr README.md /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/share/doc/python3-lfpy + RPM_EC=0 ++ jobs -p + exit 0 warning: Duplicate build-ids /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy/test/x86_64/.libs/libnrnmech.so and /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy/test/x86_64/libnrnmech.so warning: Duplicate build-ids /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy/test/x86_64/.libs/libnrnmech.so and /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy/test/x86_64/libnrnmech.so warning: Duplicate build-ids /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy/test/x86_64/.libs/libnrnmech.so and /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib64/python3.10/site-packages/LFPy/test/x86_64/libnrnmech.so warning: File listed twice: /usr/lib/.build-id/b1/cd942722f619b175b7fafeb1030978f3b82f13 warning: File listed twice: /usr/lib/.build-id/b1/cd942722f619b175b7fafeb1030978f3b82f13 warning: File listed twice: /usr/lib/.build-id/b1/cd942722f619b175b7fafeb1030978f3b82f13.1 warning: File listed twice: /usr/lib/.build-id/b1/cd942722f619b175b7fafeb1030978f3b82f13.1 Provides: python-lfpy = 2.2.4-1.fc37 python3-lfpy = 2.2.4-1.fc37 python3-lfpy(x86-64) = 2.2.4-1.fc37 python3.10-lfpy = 2.2.4-1.fc37 python3.10dist(lfpy) = 2.2.4 python3dist(lfpy) = 2.2.4 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.4)(64bit) python(abi) = 3.10 python3.10dist(cython) >= 0.20 python3.10dist(h5py) >= 2.5 python3.10dist(lfpykit) >= 0.4 python3.10dist(neuron) >= 7.7.2 python3.10dist(numpy) >= 1.8 python3.10dist(scipy) >= 0.14 rtld(GNU_HASH) Obsoletes: python3.10-lfpy < 2.2.4-1.fc37 Processing files: python-lfpy-debugsource-2.2.4-1.fc37.x86_64 Provides: python-lfpy-debugsource = 2.2.4-1.fc37 python-lfpy-debugsource(x86-64) = 2.2.4-1.fc37 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-lfpy-debuginfo-2.2.4-1.fc37.x86_64 warning: Duplicate build-ids /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib/debug/usr/lib64/python3.10/site-packages/LFPy/test/x86_64/.libs/libnrnmech.so-2.2.4-1.fc37.x86_64.debug and /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64/usr/lib/debug/usr/lib64/python3.10/site-packages/LFPy/test/x86_64/libnrnmech.so-2.2.4-1.fc37.x86_64.debug Provides: debuginfo(build-id) = a0f269e56fdea6e73162057a99c306f282d52dc3 debuginfo(build-id) = b1cd942722f619b175b7fafeb1030978f3b82f13 debuginfo(build-id) = cfc9deac07dec5466bec375409b2b2716c4791d3 debuginfo(build-id) = nilnil python-lfpy-debuginfo = 2.2.4-1.fc37 python3-lfpy-debuginfo = 2.2.4-1.fc37 python3-lfpy-debuginfo(x86-64) = 2.2.4-1.fc37 python3.10-lfpy-debuginfo = 2.2.4-1.fc37 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: python-lfpy-debugsource(x86-64) = 2.2.4-1.fc37 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64 Wrote: /builddir/build/RPMS/python3-lfpy-2.2.4-1.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/python-lfpy-debugsource-2.2.4-1.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/python3-lfpy-debuginfo-2.2.4-1.fc37.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.VgwPpZ + umask 022 + cd /builddir/build/BUILD + cd LFPy-2.2.4 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-lfpy-2.2.4-1.fc37.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0