Warning: Permanently added '3.221.155.218' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8319258-fedora-41-x86_64 --chroot fedora-41-x86_64 Version: 1.2 PID: 9198 Logging PID: 9199 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8319258, 'buildroot_pkgs': [], 'chroot': 'fedora-41-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'd19f13841c81b3bf56510ac57e9a411262b88779', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/python-pypet', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'python-pypet', 'package_version': '0.6.1-8', 'project_dirname': 'automatic-obsoletes', 'project_name': 'automatic-obsoletes', 'project_owner': 'torsava', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/torsava/automatic-obsoletes/fedora-41-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'torsava/automatic-obsoletes--https://src.fedoraproject.org/user/music', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'https://src.fedoraproject.org/user/music', 'tags': [], 'task_id': '8319258-fedora-41-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/python-pypet /var/lib/copr-rpmbuild/workspace/workdir-md7i0wlo/python-pypet --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/torsava/automatic-obsoletes/python-pypet', '/var/lib/copr-rpmbuild/workspace/workdir-md7i0wlo/python-pypet', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-md7i0wlo/python-pypet'... Running: git checkout d19f13841c81b3bf56510ac57e9a411262b88779 -- cmd: ['git', 'checkout', 'd19f13841c81b3bf56510ac57e9a411262b88779', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-md7i0wlo/python-pypet rc: 0 stdout: stderr: Note: switching to 'd19f13841c81b3bf56510ac57e9a411262b88779'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at d19f138 automatic import of python-pypet Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-md7i0wlo/python-pypet rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading pypet-0.6.1.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o pypet-0.6.1.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/torsava/automatic-obsoletes/python-pypet/pypet-0.6.1.tar.gz/md5/210b7156db88b13628a4aeec36693e74/pypet-0.6.1.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 7079k 100 7079k 0 0 289M 0 --:--:-- --:--:-- --:--:-- 300M INFO: Reading stdout from command: md5sum pypet-0.6.1.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-md7i0wlo/python-pypet/python-pypet.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-md7i0wlo/python-pypet --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1732721912.805485 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.13.0, NVR = mock-5.9-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-md7i0wlo/python-pypet/python-pypet.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-md7i0wlo/python-pypet --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1732721912.805485 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-md7i0wlo/python-pypet/python-pypet.spec) Config(fedora-41-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1732721912.805485/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:41 INFO: Pulling image: registry.fedoraproject.org/fedora:41 INFO: Copy content of container registry.fedoraproject.org/fedora:41 to /var/lib/mock/fedora-41-x86_64-bootstrap-1732721912.805485/root INFO: Checking that registry.fedoraproject.org/fedora:41 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:41 with podman image mount INFO: image registry.fedoraproject.org/fedora:41 as /var/lib/containers/storage/overlay/c149a1216f262aa32ecd78f519fcc290d6538bf0bba28b8d2bb17621b2b8de69/merged INFO: umounting image registry.fedoraproject.org/fedora:41 (/var/lib/containers/storage/overlay/c149a1216f262aa32ecd78f519fcc290d6538bf0bba28b8d2bb17621b2b8de69/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1732721912.805485/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.7.0-1.fc41.x86_64 dnf5-plugins-5.2.7.0-1.fc41.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 38.4 MiB/s | 35.4 MiB | 00m01s updates 100% | 13.1 MiB/s | 5.8 MiB | 00m00s Copr repository 100% | 46.3 MiB/s | 4.0 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 5.2.32-1.fc41 fedora 8.2 MiB bzip2 x86_64 1.0.8-19.fc41 fedora 95.7 KiB coreutils x86_64 9.5-11.fc41 updates 5.7 MiB cpio x86_64 2.15-2.fc41 fedora 1.1 MiB diffutils x86_64 3.10-8.fc41 fedora 1.6 MiB fedora-release-common noarch 41-28 updates 19.7 KiB findutils x86_64 1:4.10.0-4.fc41 fedora 1.8 MiB gawk x86_64 5.3.0-4.fc41 fedora 1.7 MiB glibc-minimal-langpack x86_64 2.40-12.fc41 updates 0.0 B grep x86_64 3.11-9.fc41 fedora 1.0 MiB gzip x86_64 1.13-2.fc41 fedora 389.0 KiB info x86_64 7.1-3.fc41 fedora 361.8 KiB patch x86_64 2.7.6-25.fc41 fedora 266.7 KiB redhat-rpm-config noarch 293-1.fc41 fedora 183.5 KiB rpm-build x86_64 4.20.0-1.fc41 copr_base 194.3 KiB sed x86_64 4.9-3.fc41 fedora 861.5 KiB shadow-utils x86_64 2:4.15.1-12.fc41 fedora 4.1 MiB tar x86_64 2:1.35-4.fc41 fedora 2.9 MiB unzip x86_64 6.0-64.fc41 fedora 386.8 KiB util-linux x86_64 2.40.2-8.fc41 copr_base 3.6 MiB which x86_64 2.21-42.fc41 fedora 80.2 KiB xz x86_64 1:5.6.2-2.fc41 fedora 1.2 MiB Installing dependencies: add-determinism x86_64 0.3.6-3.fc41 updates 2.4 MiB alternatives x86_64 1.30-1.fc41 fedora 66.3 KiB ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB audit-libs x86_64 4.0.2-1.fc41 copr_base 331.3 KiB authselect x86_64 1.5.0-8.fc41 fedora 157.6 KiB authselect-libs x86_64 1.5.0-8.fc41 fedora 822.2 KiB basesystem noarch 11-21.fc41 fedora 0.0 B binutils x86_64 2.43.1-2.fc41 fedora 27.5 MiB build-reproducibility-srpm-macros noarch 0.3.6-3.fc41 updates 735.0 B bzip2-libs x86_64 1.0.8-19.fc41 fedora 80.7 KiB ca-certificates noarch 2024.2.69_v8.0.401-1.0.fc41 fedora 2.4 MiB coreutils-common x86_64 9.5-11.fc41 updates 11.2 MiB cracklib x86_64 2.9.11-6.fc41 fedora 238.9 KiB crypto-policies noarch 20241029-1.git8baf557.fc41 updates 136.9 KiB curl x86_64 8.9.1-2.fc41 fedora 796.2 KiB cyrus-sasl-lib x86_64 2.1.28-27.fc41 fedora 2.3 MiB debugedit x86_64 5.1-1.fc41 updates 199.8 KiB dwz x86_64 0.15-8.fc41 fedora 298.9 KiB ed x86_64 1.20.2-2.fc41 fedora 146.9 KiB efi-srpm-macros noarch 5-13.fc41 updates 40.2 KiB elfutils x86_64 0.192-6.fc41 updates 2.7 MiB elfutils-debuginfod-client x86_64 0.192-6.fc41 updates 84.1 KiB elfutils-default-yama-scope noarch 0.192-6.fc41 updates 1.8 KiB elfutils-libelf x86_64 0.192-6.fc41 updates 1.2 MiB elfutils-libs x86_64 0.192-6.fc41 updates 666.3 KiB fedora-gpg-keys noarch 41-1 fedora 126.4 KiB fedora-release noarch 41-28 updates 0.0 B fedora-release-identity-basic noarch 41-28 updates 682.0 B fedora-repos noarch 41-1 fedora 4.9 KiB file x86_64 5.45-8.fc41 copr_base 103.5 KiB file-libs x86_64 5.45-8.fc41 copr_base 9.9 MiB filesystem x86_64 3.18-23.fc41 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB forge-srpm-macros noarch 0.3.2-1.fc41 fedora 39.0 KiB fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B gdb-minimal x86_64 15.2-3.fc41 updates 13.0 MiB gdbm x86_64 1:1.23-7.fc41 fedora 460.9 KiB gdbm-libs x86_64 1:1.23-7.fc41 fedora 121.9 KiB ghc-srpm-macros noarch 1.9.1-2.fc41 fedora 747.0 B glibc x86_64 2.40-12.fc41 updates 6.7 MiB glibc-common x86_64 2.40-12.fc41 updates 1.0 MiB glibc-gconv-extra x86_64 2.40-12.fc41 updates 8.0 MiB gmp x86_64 1:6.3.0-2.fc41 fedora 811.4 KiB gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-3.fc41 fedora 60.8 KiB jansson x86_64 2.13.1-10.fc41 fedora 88.3 KiB json-c x86_64 0.17-4.fc41 fedora 82.4 KiB kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB keyutils-libs x86_64 1.6.3-4.fc41 fedora 54.4 KiB krb5-libs x86_64 1.21.3-3.fc41 updates 2.3 MiB libacl x86_64 2.3.2-2.fc41 fedora 40.0 KiB libarchive x86_64 3.7.4-4.fc41 updates 926.6 KiB libattr x86_64 2.5.2-4.fc41 fedora 28.5 KiB libblkid x86_64 2.40.2-8.fc41 copr_base 262.5 KiB libbrotli x86_64 1.1.0-5.fc41 fedora 837.6 KiB libcap x86_64 2.70-4.fc41 fedora 220.2 KiB libcap-ng x86_64 0.8.5-3.fc41 fedora 69.2 KiB libcom_err x86_64 1.47.1-6.fc41 fedora 67.2 KiB libcurl x86_64 8.9.1-2.fc41 fedora 818.1 KiB libeconf x86_64 0.6.2-3.fc41 fedora 58.0 KiB libevent x86_64 2.1.12-14.fc41 fedora 895.7 KiB libfdisk x86_64 2.40.2-8.fc41 copr_base 362.9 KiB libffi x86_64 3.4.6-3.fc41 fedora 86.4 KiB libgcc x86_64 14.2.1-3.fc41 fedora 274.6 KiB libgomp x86_64 14.2.1-3.fc41 fedora 523.5 KiB libidn2 x86_64 2.3.7-2.fc41 fedora 329.1 KiB libmount x86_64 2.40.2-8.fc41 copr_base 351.8 KiB libnghttp2 x86_64 1.62.1-2.fc41 fedora 166.1 KiB libnsl2 x86_64 2.0.1-2.fc41 fedora 57.9 KiB libpkgconf x86_64 2.3.0-1.fc41 fedora 78.2 KiB libpsl x86_64 0.21.5-4.fc41 fedora 80.5 KiB libpwquality x86_64 1.4.5-11.fc41 fedora 417.8 KiB libselinux x86_64 3.7-7.fc41 copr_base 181.0 KiB libsemanage x86_64 3.7-4.fc41 copr_base 297.5 KiB libsepol x86_64 3.7-2.fc41 fedora 817.8 KiB libsmartcols x86_64 2.40.2-8.fc41 copr_base 180.4 KiB libssh x86_64 0.10.6-8.fc41 fedora 513.3 KiB libssh-config noarch 0.10.6-8.fc41 fedora 277.0 B libstdc++ x86_64 14.2.1-3.fc41 fedora 2.8 MiB libtasn1 x86_64 4.19.0-9.fc41 fedora 175.7 KiB libtirpc x86_64 1.3.6-1.fc41 updates 202.7 KiB libtool-ltdl x86_64 2.4.7-12.fc41 fedora 66.2 KiB libunistring x86_64 1.1-8.fc41 fedora 1.7 MiB libuuid x86_64 2.40.2-8.fc41 copr_base 41.4 KiB libverto x86_64 0.3.2-9.fc41 fedora 29.5 KiB libxcrypt x86_64 4.4.36-10.fc41 updates 271.4 KiB libxml2 x86_64 2.12.8-2.fc41 fedora 1.7 MiB libzstd x86_64 1.5.6-2.fc41 fedora 795.9 KiB lua-libs x86_64 5.4.6-6.fc41 fedora 285.0 KiB lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB lz4-libs x86_64 1.10.0-1.fc41 fedora 145.5 KiB mpfr x86_64 4.2.1-5.fc41 fedora 832.1 KiB ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB ncurses-libs x86_64 6.5-2.20240629.fc41 fedora 975.2 KiB ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B openldap x86_64 2.6.8-5.fc41 fedora 644.2 KiB openssl-libs x86_64 1:3.2.2-9.fc41 fedora 7.8 MiB p11-kit x86_64 0.25.5-3.fc41 fedora 2.2 MiB p11-kit-trust x86_64 0.25.5-3.fc41 fedora 391.4 KiB package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB pam x86_64 1.6.1-6.fc41 updates 1.8 MiB pam-libs x86_64 1.6.1-6.fc41 updates 139.0 KiB pcre2 x86_64 10.44-1.fc41.1 fedora 653.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 fedora 251.6 KiB perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B pkgconf x86_64 2.3.0-1.fc41 fedora 88.6 KiB pkgconf-m4 noarch 2.3.0-1.fc41 fedora 14.4 KiB pkgconf-pkg-config x86_64 2.3.0-1.fc41 fedora 989.0 B popt x86_64 1.19-7.fc41 fedora 136.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB pyproject-srpm-macros noarch 1.16.0-1.fc41 updates 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc41 fedora 500.0 B qt6-srpm-macros noarch 6.8.0-1.fc41 updates 456.0 B readline x86_64 8.2-10.fc41 fedora 493.2 KiB rpm x86_64 4.20.0-1.fc41 copr_base 3.1 MiB rpm-build-libs x86_64 4.20.0-1.fc41 copr_base 206.7 KiB rpm-libs x86_64 4.20.0-1.fc41 copr_base 725.9 KiB rpm-sequoia x86_64 1.7.0-2.fc41 fedora 2.4 MiB rust-srpm-macros noarch 26.3-3.fc41 copr_base 4.8 KiB setup noarch 2.15.0-5.fc41 fedora 720.7 KiB sqlite-libs x86_64 3.46.1-1.fc41 fedora 1.4 MiB systemd-libs x86_64 256.8-1.fc41 updates 2.0 MiB util-linux-core x86_64 2.40.2-8.fc41 copr_base 1.5 MiB xxhash-libs x86_64 0.8.2-4.fc41 fedora 88.4 KiB xz-libs x86_64 1:5.6.2-2.fc41 fedora 214.4 KiB zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB zip x86_64 3.0-41.fc41 fedora 703.2 KiB zlib-ng-compat x86_64 2.1.7-3.fc41 fedora 134.0 KiB zstd x86_64 1.5.6-2.fc41 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 53 MiB. Need to download 53 MiB. After this operation, 181 MiB extra will be used (install 181 MiB, remove 0 B). [ 1/153] bzip2-0:1.0.8-19.fc41.x86_64 100% | 5.1 MiB/s | 52.5 KiB | 00m00s [ 2/153] cpio-0:2.15-2.fc41.x86_64 100% | 19.0 MiB/s | 291.8 KiB | 00m00s [ 3/153] diffutils-0:3.10-8.fc41.x86_6 100% | 66.0 MiB/s | 405.4 KiB | 00m00s [ 4/153] bash-0:5.2.32-1.fc41.x86_64 100% | 90.3 MiB/s | 1.8 MiB | 00m00s [ 5/153] grep-0:3.11-9.fc41.x86_64 100% | 73.2 MiB/s | 299.7 KiB | 00m00s [ 6/153] findutils-1:4.10.0-4.fc41.x86 100% | 89.3 MiB/s | 548.5 KiB | 00m00s [ 7/153] gzip-0:1.13-2.fc41.x86_64 100% | 55.4 MiB/s | 170.2 KiB | 00m00s [ 8/153] info-0:7.1-3.fc41.x86_64 100% | 89.1 MiB/s | 182.5 KiB | 00m00s [ 9/153] patch-0:2.7.6-25.fc41.x86_64 100% | 32.0 MiB/s | 131.0 KiB | 00m00s [ 10/153] redhat-rpm-config-0:293-1.fc4 100% | 26.7 MiB/s | 82.0 KiB | 00m00s [ 11/153] sed-0:4.9-3.fc41.x86_64 100% | 103.4 MiB/s | 317.7 KiB | 00m00s [ 12/153] unzip-0:6.0-64.fc41.x86_64 100% | 90.3 MiB/s | 184.9 KiB | 00m00s [ 13/153] tar-2:1.35-4.fc41.x86_64 100% | 120.1 MiB/s | 860.7 KiB | 00m00s [ 14/153] shadow-utils-2:4.15.1-12.fc41 100% | 146.6 MiB/s | 1.3 MiB | 00m00s [ 15/153] which-0:2.21-42.fc41.x86_64 100% | 8.1 MiB/s | 41.6 KiB | 00m00s [ 16/153] xz-1:5.6.2-2.fc41.x86_64 100% | 115.1 MiB/s | 471.5 KiB | 00m00s [ 17/153] fedora-release-common-0:41-28 100% | 7.6 MiB/s | 23.5 KiB | 00m00s [ 18/153] coreutils-0:9.5-11.fc41.x86_6 100% | 157.1 MiB/s | 1.1 MiB | 00m00s [ 19/153] glibc-minimal-langpack-0:2.40 100% | 26.1 MiB/s | 106.7 KiB | 00m00s [ 20/153] gawk-0:5.3.0-4.fc41.x86_64 100% | 133.9 MiB/s | 1.1 MiB | 00m00s [ 21/153] rpm-build-0:4.20.0-1.fc41.x86 100% | 10.6 MiB/s | 75.8 KiB | 00m00s [ 22/153] filesystem-0:3.18-23.fc41.x86 100% | 217.4 MiB/s | 1.1 MiB | 00m00s [ 23/153] ncurses-libs-0:6.5-2.20240629 100% | 108.7 MiB/s | 334.0 KiB | 00m00s [ 24/153] bzip2-libs-0:1.0.8-19.fc41.x8 100% | 20.1 MiB/s | 41.1 KiB | 00m00s [ 25/153] util-linux-0:2.40.2-8.fc41.x8 100% | 74.6 MiB/s | 1.1 MiB | 00m00s [ 26/153] pcre2-0:10.44-1.fc41.1.x86_64 100% | 47.5 MiB/s | 243.1 KiB | 00m00s [ 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fedora-repos-0:41-1.noarch 100% | 3.0 MiB/s | 9.2 KiB | 00m00s [ 54/153] openssl-libs-1:3.2.2-9.fc41.x 100% | 210.1 MiB/s | 2.3 MiB | 00m00s [ 55/153] coreutils-common-0:9.5-11.fc4 100% | 163.3 MiB/s | 2.1 MiB | 00m00s [ 56/153] mpfr-0:4.2.1-5.fc41.x86_64 100% | 42.3 MiB/s | 346.3 KiB | 00m00s [ 57/153] readline-0:8.2-10.fc41.x86_64 100% | 52.0 MiB/s | 213.2 KiB | 00m00s [ 58/153] glibc-common-0:2.40-12.fc41.x 100% | 128.6 MiB/s | 395.1 KiB | 00m00s [ 59/153] popt-0:1.19-7.fc41.x86_64 100% | 21.5 MiB/s | 65.9 KiB | 00m00s [ 60/153] zstd-0:1.5.6-2.fc41.x86_64 100% | 117.6 MiB/s | 481.5 KiB | 00m00s [ 61/153] zlib-ng-compat-0:2.1.7-3.fc41 100% | 25.3 MiB/s | 77.7 KiB | 00m00s [ 62/153] libblkid-0:2.40.2-8.fc41.x86_ 100% | 40.8 MiB/s | 125.5 KiB | 00m00s [ 63/153] libfdisk-0:2.40.2-8.fc41.x86_ 100% | 52.1 MiB/s | 159.9 KiB | 00m00s [ 64/153] libmount-0:2.40.2-8.fc41.x86_ 100% | 50.9 MiB/s | 156.2 KiB | 00m00s [ 65/153] libsmartcols-0:2.40.2-8.fc41. 100% | 20.6 MiB/s | 84.4 KiB | 00m00s [ 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-------------------------------------------------------------------------------- [153/153] Total 100% | 67.4 MiB/s | 53.1 MiB | 00m01s Running transaction Importing PGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. [ 1/155] Verify package files 100% | 801.0 B/s | 153.0 B | 00m00s >>> Running pre-transaction scriptlet: filesystem-0:3.18-23.fc41.x86_64 >>> Finished pre-transaction scriptlet: filesystem-0:3.18-23.fc41.x86_64 >>> [RPM] /var/lib/mock/fedora-41-x86_64-1732721912.805485/root/var/cache/dnf/co [ 2/155] Prepare transaction 100% | 3.6 KiB/s | 153.0 B | 00m00s [ 3/155] Installing libgcc-0:14.2.1-3. 100% | 269.8 MiB/s | 276.3 KiB | 00m00s [ 4/155] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 5/155] Installing publicsuffix-list- 100% | 0.0 B/s | 68.3 KiB | 00m00s [ 6/155] Installing fedora-release-ide 100% | 0.0 B/s | 940.0 B | 00m00s [ 7/155] Installing fedora-gpg-keys-0: 100% | 42.0 MiB/s | 172.2 KiB | 00m00s [ 8/155] Installing fedora-repos-0:41- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 9/155] Installing fedora-release-com 100% | 23.4 MiB/s | 24.0 KiB | 00m00s [ 10/155] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 11/155] Installing setup-0:2.15.0-5.f 100% | 54.5 MiB/s | 726.1 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 12/155] Installing filesystem-0:3.18- 100% | 3.3 MiB/s | 212.5 KiB | 00m00s [ 13/155] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s [ 14/155] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [ 15/155] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [ 16/155] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [ 17/155] Installing pcre2-syntax-0:10. 100% | 248.1 MiB/s | 254.1 KiB | 00m00s [ 18/155] Installing ncurses-base-0:6.5 100% | 85.9 MiB/s | 351.7 KiB | 00m00s [ 19/155] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 20/155] Installing ncurses-libs-0:6.5 100% | 191.8 MiB/s | 981.8 KiB | 00m00s [ 21/155] Installing glibc-0:2.40-12.fc 100% | 278.7 MiB/s | 6.7 MiB | 00m00s [ 22/155] Installing bash-0:5.2.32-1.fc 100% | 389.0 MiB/s | 8.2 MiB | 00m00s [ 23/155] Installing glibc-common-0:2.4 100% | 174.5 MiB/s | 1.0 MiB | 00m00s [ 24/155] Installing glibc-gconv-extra- 100% | 261.3 MiB/s | 8.1 MiB | 00m00s [ 25/155] Installing zlib-ng-compat-0:2 100% | 131.6 MiB/s | 134.8 KiB | 00m00s [ 26/155] Installing bzip2-libs-0:1.0.8 100% | 79.9 MiB/s | 81.8 KiB | 00m00s [ 27/155] Installing xz-libs-1:5.6.2-2. 100% | 210.4 MiB/s | 215.5 KiB | 00m00s [ 28/155] Installing readline-0:8.2-10. 100% | 241.8 MiB/s | 495.3 KiB | 00m00s [ 29/155] Installing popt-0:1.19-7.fc41 100% | 70.1 MiB/s | 143.5 KiB | 00m00s [ 30/155] Installing libuuid-0:2.40.2-8 100% | 0.0 B/s | 42.5 KiB | 00m00s [ 31/155] Installing libblkid-0:2.40.2- 100% | 257.5 MiB/s | 263.6 KiB | 00m00s [ 32/155] Installing libattr-0:2.5.2-4. 100% | 0.0 B/s | 29.5 KiB | 00m00s [ 33/155] Installing libacl-0:2.3.2-2.f 100% | 0.0 B/s | 40.7 KiB | 00m00s [ 34/155] Installing gmp-1:6.3.0-2.fc41 100% | 264.9 MiB/s | 813.7 KiB | 00m00s [ 35/155] Installing libstdc++-0:14.2.1 100% | 345.8 MiB/s | 2.8 MiB | 00m00s [ 36/155] Installing libxcrypt-0:4.4.36 100% | 267.7 MiB/s | 274.1 KiB | 00m00s [ 37/155] Installing libzstd-0:1.5.6-2. 100% | 389.3 MiB/s | 797.2 KiB | 00m00s [ 38/155] Installing elfutils-libelf-0: 100% | 390.0 MiB/s | 1.2 MiB | 00m00s [ 39/155] Installing libeconf-0:0.6.2-3 100% | 58.3 MiB/s | 59.7 KiB | 00m00s [ 40/155] Installing gdbm-libs-1:1.23-7 100% | 120.7 MiB/s | 123.6 KiB | 00m00s [ 41/155] Installing dwz-0:0.15-8.fc41. 100% | 293.3 MiB/s | 300.3 KiB | 00m00s [ 42/155] Installing mpfr-0:4.2.1-5.fc4 100% | 271.4 MiB/s | 833.7 KiB | 00m00s [ 43/155] Installing gawk-0:5.3.0-4.fc4 100% | 288.7 MiB/s | 1.7 MiB | 00m00s [ 44/155] Installing unzip-0:6.0-64.fc4 100% | 190.6 MiB/s | 390.3 KiB | 00m00s [ 45/155] Installing file-libs-0:5.45-8 100% | 620.9 MiB/s | 9.9 MiB | 00m00s [ 46/155] Installing file-0:5.45-8.fc41 100% | 12.8 MiB/s | 105.0 KiB | 00m00s >>> Running pre-install scriptlet: crypto-policies-0:20241029-1.git8baf557.fc41. >>> Finished pre-install scriptlet: crypto-policies-0:20241029-1.git8baf557.fc41 >>> Scriptlet output: >>> /var/tmp/rpm-tmp.uToNxb: line 2: rm: command not found >>> [ 47/155] Installing crypto-policies-0: 100% | 31.9 MiB/s | 163.3 KiB | 00m00s [ 48/155] Installing pcre2-0:10.44-1.fc 100% | 319.8 MiB/s | 654.9 KiB | 00m00s [ 49/155] Installing grep-0:3.11-9.fc41 100% | 200.7 MiB/s | 1.0 MiB | 00m00s [ 50/155] Installing xz-1:5.6.2-2.fc41. 100% | 200.8 MiB/s | 1.2 MiB | 00m00s [ 51/155] Installing libsmartcols-0:2.4 100% | 177.2 MiB/s | 181.5 KiB | 00m00s [ 52/155] Installing lz4-libs-0:1.10.0- 100% | 143.1 MiB/s | 146.6 KiB | 00m00s [ 53/155] Installing libsepol-0:3.7-2.f 100% | 266.5 MiB/s | 818.8 KiB | 00m00s [ 54/155] Installing libselinux-0:3.7-7 100% | 178.0 MiB/s | 182.3 KiB | 00m00s [ 55/155] Installing sed-0:4.9-3.fc41.x 100% | 212.3 MiB/s | 869.7 KiB | 00m00s [ 56/155] Installing findutils-1:4.10.0 100% | 309.7 MiB/s | 1.9 MiB | 00m00s [ 57/155] Installing libmount-0:2.40.2- 100% | 172.3 MiB/s | 352.9 KiB | 00m00s [ 58/155] Installing alternatives-0:1.3 100% | 66.3 MiB/s | 67.9 KiB | 00m00s [ 59/155] Installing libcap-ng-0:0.8.5- 100% | 69.4 MiB/s | 71.0 KiB | 00m00s [ 60/155] Installing audit-libs-0:4.0.2 100% | 162.8 MiB/s | 333.4 KiB | 00m00s [ 61/155] Installing pam-libs-0:1.6.1-6 100% | 137.9 MiB/s | 141.2 KiB | 00m00s [ 62/155] Installing libcap-0:2.70-4.fc 100% | 110.0 MiB/s | 225.2 KiB | 00m00s [ 63/155] Installing systemd-libs-0:256 100% | 339.0 MiB/s | 2.0 MiB | 00m00s [ 64/155] Installing lua-libs-0:5.4.6-6 100% | 279.5 MiB/s | 286.2 KiB | 00m00s [ 65/155] Installing libcom_err-0:1.47. 100% | 0.0 B/s | 68.3 KiB | 00m00s [ 66/155] Installing libffi-0:3.4.6-3.f 100% | 85.7 MiB/s | 87.8 KiB | 00m00s [ 67/155] Installing libtasn1-0:4.19.0- 100% | 173.3 MiB/s | 177.5 KiB | 00m00s [ 68/155] Installing p11-kit-0:0.25.5-3 100% | 245.3 MiB/s | 2.2 MiB | 00m00s [ 69/155] Installing libunistring-0:1.1 100% | 346.1 MiB/s | 1.7 MiB | 00m00s [ 70/155] Installing libidn2-0:2.3.7-2. 100% | 109.1 MiB/s | 335.1 KiB | 00m00s [ 71/155] Installing libpsl-0:0.21.5-4. 100% | 79.7 MiB/s | 81.7 KiB | 00m00s [ 72/155] Installing p11-kit-trust-0:0. 100% | 42.7 MiB/s | 393.1 KiB | 00m00s [ 73/155] Installing util-linux-core-0: 100% | 217.2 MiB/s | 1.5 MiB | 00m00s [ 74/155] Installing libsemanage-0:3.7- 100% | 146.1 MiB/s | 299.3 KiB | 00m00s [ 75/155] Installing shadow-utils-2:4.1 100% | 219.2 MiB/s | 4.2 MiB | 00m00s [ 76/155] Installing tar-2:1.35-4.fc41. 100% | 328.7 MiB/s | 3.0 MiB | 00m00s [ 77/155] Installing zstd-0:1.5.6-2.fc4 100% | 338.3 MiB/s | 1.7 MiB | 00m00s [ 78/155] Installing zip-0:3.0-41.fc41. 100% | 345.2 MiB/s | 707.1 KiB | 00m00s [ 79/155] Installing gdbm-1:1.23-7.fc41 100% | 227.4 MiB/s | 465.8 KiB | 00m00s [ 80/155] Installing cyrus-sasl-lib-0:2 100% | 384.3 MiB/s | 2.3 MiB | 00m00s [ 81/155] Installing libfdisk-0:2.40.2- 100% | 355.3 MiB/s | 363.9 KiB | 00m00s [ 82/155] Installing libxml2-0:2.12.8-2 100% | 342.4 MiB/s | 1.7 MiB | 00m00s [ 83/155] Installing bzip2-0:1.0.8-19.f 100% | 97.8 MiB/s | 100.2 KiB | 00m00s [ 84/155] Installing sqlite-libs-0:3.46 100% | 357.3 MiB/s | 1.4 MiB | 00m00s [ 85/155] Installing add-determinism-0: 100% | 392.6 MiB/s | 2.4 MiB | 00m00s [ 86/155] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 87/155] Installing ed-0:1.20.2-2.fc41 100% | 145.7 MiB/s | 149.2 KiB | 00m00s [ 88/155] Installing patch-0:2.7.6-25.f 100% | 261.9 MiB/s | 268.2 KiB | 00m00s [ 89/155] Installing elfutils-default-y 100% | 340.5 KiB/s | 2.0 KiB | 00m00s [ 90/155] Installing elfutils-libs-0:0. 100% | 217.5 MiB/s | 668.1 KiB | 00m00s [ 91/155] Installing cpio-0:2.15-2.fc41 100% | 219.9 MiB/s | 1.1 MiB | 00m00s [ 92/155] Installing diffutils-0:3.10-8 100% | 265.0 MiB/s | 1.6 MiB | 00m00s [ 93/155] Installing jansson-0:2.13.1-1 100% | 87.6 MiB/s | 89.7 KiB | 00m00s [ 94/155] Installing json-c-0:0.17-4.fc 100% | 81.7 MiB/s | 83.6 KiB | 00m00s [ 95/155] Installing libpkgconf-0:2.3.0 100% | 77.5 MiB/s | 79.3 KiB | 00m00s [ 96/155] Installing pkgconf-0:2.3.0-1. 100% | 89.0 MiB/s | 91.1 KiB | 00m00s [ 97/155] Installing pkgconf-pkg-config 100% | 0.0 B/s | 1.8 KiB | 00m00s [ 98/155] Installing libgomp-0:14.2.1-3 100% | 256.2 MiB/s | 524.8 KiB | 00m00s [ 99/155] Installing keyutils-libs-0:1. 100% | 54.5 MiB/s | 55.8 KiB | 00m00s [100/155] Installing libverto-0:0.3.2-9 100% | 30.5 MiB/s | 31.3 KiB | 00m00s [101/155] Installing xxhash-libs-0:0.8. 100% | 87.7 MiB/s | 89.8 KiB | 00m00s [102/155] Installing libnghttp2-0:1.62. 100% | 163.2 MiB/s | 167.1 KiB | 00m00s [103/155] Installing libtool-ltdl-0:2.4 100% | 65.7 MiB/s | 67.3 KiB | 00m00s [104/155] Installing libbrotli-0:1.1.0- 100% | 205.0 MiB/s | 839.9 KiB | 00m00s [105/155] Installing coreutils-common-0 100% | 361.0 MiB/s | 11.2 MiB | 00m00s [106/155] Installing openssl-libs-1:3.2 100% | 372.8 MiB/s | 7.8 MiB | 00m00s [107/155] Installing coreutils-0:9.5-11 100% | 248.1 MiB/s | 5.7 MiB | 00m00s [108/155] Installing ca-certificates-0: 100% | 3.6 MiB/s | 2.4 MiB | 00m01s [109/155] Installing krb5-libs-0:1.21.3 100% | 257.7 MiB/s | 2.3 MiB | 00m00s [110/155] Installing libarchive-0:3.7.4 100% | 302.3 MiB/s | 928.6 KiB | 00m00s [111/155] Installing libtirpc-0:1.3.6-1 100% | 199.7 MiB/s | 204.5 KiB | 00m00s [112/155] Installing gzip-0:1.13-2.fc41 100% | 192.7 MiB/s | 394.6 KiB | 00m00s [113/155] Installing authselect-libs-0: 100% | 163.5 MiB/s | 837.2 KiB | 00m00s [114/155] Installing cracklib-0:2.9.11- 100% | 61.1 MiB/s | 250.3 KiB | 00m00s [115/155] Installing libpwquality-0:1.4 100% | 105.0 MiB/s | 430.1 KiB | 00m00s [116/155] Installing libnsl2-0:2.0.1-2. 100% | 57.7 MiB/s | 59.1 KiB | 00m00s [117/155] Installing pam-0:1.6.1-6.fc41 100% | 144.4 MiB/s | 1.9 MiB | 00m00s [118/155] Installing libssh-0:0.10.6-8. 100% | 251.7 MiB/s | 515.4 KiB | 00m00s [119/155] Installing rpm-sequoia-0:1.7. 100% | 338.2 MiB/s | 2.4 MiB | 00m00s [120/155] Installing rpm-libs-0:4.20.0- 100% | 236.8 MiB/s | 727.4 KiB | 00m00s [121/155] Installing rpm-build-libs-0:4 100% | 202.6 MiB/s | 207.5 KiB | 00m00s [122/155] Installing libevent-0:2.1.12- 100% | 292.8 MiB/s | 899.5 KiB | 00m00s [123/155] Installing openldap-0:2.6.8-5 100% | 210.9 MiB/s | 648.0 KiB | 00m00s [124/155] Installing libcurl-0:8.9.1-2. 100% | 266.7 MiB/s | 819.2 KiB | 00m00s [125/155] Installing elfutils-debuginfo 100% | 42.2 MiB/s | 86.3 KiB | 00m00s [126/155] Installing binutils-0:2.43.1- 100% | 348.5 MiB/s | 27.5 MiB | 00m00s [127/155] Installing elfutils-0:0.192-6 100% | 334.4 MiB/s | 2.7 MiB | 00m00s [128/155] Installing gdb-minimal-0:15.2 100% | 360.9 MiB/s | 13.0 MiB | 00m00s [129/155] Installing debugedit-0:5.1-1. 100% | 197.8 MiB/s | 202.5 KiB | 00m00s [130/155] Installing curl-0:8.9.1-2.fc4 100% | 70.9 MiB/s | 798.6 KiB | 00m00s [131/155] Installing rpm-0:4.20.0-1.fc4 100% | 167.1 MiB/s | 2.5 MiB | 00m00s [132/155] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [133/155] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [134/155] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.2 KiB | 00m00s [135/155] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [136/155] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [137/155] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [138/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [139/155] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [140/155] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [141/155] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [142/155] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [143/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [144/155] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [145/155] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [146/155] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.4 KiB | 00m00s [147/155] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [148/155] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [149/155] Installing redhat-rpm-config- 100% | 92.8 MiB/s | 190.1 KiB | 00m00s [150/155] Installing rpm-build-0:4.20.0 100% | 99.0 MiB/s | 202.8 KiB | 00m00s [151/155] Installing pyproject-srpm-mac 100% | 2.4 MiB/s | 2.5 KiB | 00m00s [152/155] Installing util-linux-0:2.40. 100% | 153.5 MiB/s | 3.7 MiB | 00m00s [153/155] Installing authselect-0:1.5.0 100% | 79.1 MiB/s | 161.9 KiB | 00m00s [154/155] Installing which-0:2.21-42.fc 100% | 80.5 MiB/s | 82.4 KiB | 00m00s [155/155] Installing info-0:7.1-3.fc41. 100% | 402.9 KiB/s | 362.2 KiB | 00m01s Warning: skipped PGP checks for 17 packages from repository: copr_base Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.3.6-3.fc41.x86_64 alternatives-1.30-1.fc41.x86_64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.x86_64 authselect-1.5.0-8.fc41.x86_64 authselect-libs-1.5.0-8.fc41.x86_64 basesystem-11-21.fc41.noarch bash-5.2.32-1.fc41.x86_64 binutils-2.43.1-2.fc41.x86_64 build-reproducibility-srpm-macros-0.3.6-3.fc41.noarch bzip2-1.0.8-19.fc41.x86_64 bzip2-libs-1.0.8-19.fc41.x86_64 ca-certificates-2024.2.69_v8.0.401-1.0.fc41.noarch coreutils-9.5-11.fc41.x86_64 coreutils-common-9.5-11.fc41.x86_64 cpio-2.15-2.fc41.x86_64 cracklib-2.9.11-6.fc41.x86_64 crypto-policies-20241029-1.git8baf557.fc41.noarch curl-8.9.1-2.fc41.x86_64 cyrus-sasl-lib-2.1.28-27.fc41.x86_64 debugedit-5.1-1.fc41.x86_64 diffutils-3.10-8.fc41.x86_64 dwz-0.15-8.fc41.x86_64 ed-1.20.2-2.fc41.x86_64 efi-srpm-macros-5-13.fc41.noarch elfutils-0.192-6.fc41.x86_64 elfutils-debuginfod-client-0.192-6.fc41.x86_64 elfutils-default-yama-scope-0.192-6.fc41.noarch elfutils-libelf-0.192-6.fc41.x86_64 elfutils-libs-0.192-6.fc41.x86_64 fedora-gpg-keys-41-1.noarch fedora-release-41-28.noarch fedora-release-common-41-28.noarch fedora-release-identity-basic-41-28.noarch fedora-repos-41-1.noarch file-5.45-8.fc41.x86_64 file-libs-5.45-8.fc41.x86_64 filesystem-3.18-23.fc41.x86_64 findutils-4.10.0-4.fc41.x86_64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.3.2-1.fc41.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.x86_64 gdb-minimal-15.2-3.fc41.x86_64 gdbm-1.23-7.fc41.x86_64 gdbm-libs-1.23-7.fc41.x86_64 ghc-srpm-macros-1.9.1-2.fc41.noarch glibc-2.40-12.fc41.x86_64 glibc-common-2.40-12.fc41.x86_64 glibc-gconv-extra-2.40-12.fc41.x86_64 glibc-minimal-langpack-2.40-12.fc41.x86_64 gmp-6.3.0-2.fc41.x86_64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc41.x86_64 gzip-1.13-2.fc41.x86_64 info-7.1-3.fc41.x86_64 jansson-2.13.1-10.fc41.x86_64 json-c-0.17-4.fc41.x86_64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.x86_64 krb5-libs-1.21.3-3.fc41.x86_64 libacl-2.3.2-2.fc41.x86_64 libarchive-3.7.4-4.fc41.x86_64 libattr-2.5.2-4.fc41.x86_64 libblkid-2.40.2-8.fc41.x86_64 libbrotli-1.1.0-5.fc41.x86_64 libcap-2.70-4.fc41.x86_64 libcap-ng-0.8.5-3.fc41.x86_64 libcom_err-1.47.1-6.fc41.x86_64 libcurl-8.9.1-2.fc41.x86_64 libeconf-0.6.2-3.fc41.x86_64 libevent-2.1.12-14.fc41.x86_64 libfdisk-2.40.2-8.fc41.x86_64 libffi-3.4.6-3.fc41.x86_64 libgcc-14.2.1-3.fc41.x86_64 libgomp-14.2.1-3.fc41.x86_64 libidn2-2.3.7-2.fc41.x86_64 libmount-2.40.2-8.fc41.x86_64 libnghttp2-1.62.1-2.fc41.x86_64 libnsl2-2.0.1-2.fc41.x86_64 libpkgconf-2.3.0-1.fc41.x86_64 libpsl-0.21.5-4.fc41.x86_64 libpwquality-1.4.5-11.fc41.x86_64 libselinux-3.7-7.fc41.x86_64 libsemanage-3.7-4.fc41.x86_64 libsepol-3.7-2.fc41.x86_64 libsmartcols-2.40.2-8.fc41.x86_64 libssh-0.10.6-8.fc41.x86_64 libssh-config-0.10.6-8.fc41.noarch libstdc++-14.2.1-3.fc41.x86_64 libtasn1-4.19.0-9.fc41.x86_64 libtirpc-1.3.6-1.fc41.x86_64 libtool-ltdl-2.4.7-12.fc41.x86_64 libunistring-1.1-8.fc41.x86_64 libuuid-2.40.2-8.fc41.x86_64 libverto-0.3.2-9.fc41.x86_64 libxcrypt-4.4.36-10.fc41.x86_64 libxml2-2.12.8-2.fc41.x86_64 libzstd-1.5.6-2.fc41.x86_64 lua-libs-5.4.6-6.fc41.x86_64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.x86_64 mpfr-4.2.1-5.fc41.x86_64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.x86_64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.x86_64 openssl-libs-3.2.2-9.fc41.x86_64 p11-kit-0.25.5-3.fc41.x86_64 p11-kit-trust-0.25.5-3.fc41.x86_64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-6.fc41.x86_64 pam-libs-1.6.1-6.fc41.x86_64 patch-2.7.6-25.fc41.x86_64 pcre2-10.44-1.fc41.1.x86_64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc41.x86_64 pkgconf-m4-2.3.0-1.fc41.noarch pkgconf-pkg-config-2.3.0-1.fc41.x86_64 popt-1.19-7.fc41.x86_64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.16.0-1.fc41.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc41.noarch qt6-srpm-macros-6.8.0-1.fc41.noarch readline-8.2-10.fc41.x86_64 redhat-rpm-config-293-1.fc41.noarch rpm-4.20.0-1.fc41.x86_64 rpm-build-4.20.0-1.fc41.x86_64 rpm-build-libs-4.20.0-1.fc41.x86_64 rpm-libs-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 rust-srpm-macros-26.3-3.fc41.noarch sed-4.9-3.fc41.x86_64 setup-2.15.0-5.fc41.noarch shadow-utils-4.15.1-12.fc41.x86_64 sqlite-libs-3.46.1-1.fc41.x86_64 systemd-libs-256.8-1.fc41.x86_64 tar-1.35-4.fc41.x86_64 unzip-6.0-64.fc41.x86_64 util-linux-2.40.2-8.fc41.x86_64 util-linux-core-2.40.2-8.fc41.x86_64 which-2.21-42.fc41.x86_64 xxhash-libs-0.8.2-4.fc41.x86_64 xz-5.6.2-2.fc41.x86_64 xz-libs-5.6.2-2.fc41.x86_64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.x86_64 zlib-ng-compat-2.1.7-3.fc41.x86_64 zstd-1.5.6-2.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1732665600 Wrote: /builddir/build/SRPMS/python-pypet-0.6.1-8.fc41.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-x86_64-1732721912.805485/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-md7i0wlo/python-pypet/python-pypet.spec) Config(child) 0 minutes 25 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/python-pypet-0.6.1-8.fc41.src.rpm) Config(fedora-41-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1732721912.805485/root. INFO: reusing tmpfs at /var/lib/mock/fedora-41-x86_64-bootstrap-1732721912.805485/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-x86_64-1732721912.805485/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc41.x86_64 rpm-sequoia-1.7.0-2.fc41.x86_64 dnf5-5.2.7.0-1.fc41.x86_64 dnf5-plugins-5.2.7.0-1.fc41.x86_64 Finish: chroot init Start: build phase for python-pypet-0.6.1-8.fc41.src.rpm Start: build setup for python-pypet-0.6.1-8.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1732665600 Wrote: /builddir/build/SRPMS/python-pypet-0.6.1-8.fc41.src.rpm Updating and loading repositories: updates 100% | 112.1 KiB/s | 28.1 KiB | 00m00s fedora 100% | 96.1 KiB/s | 31.0 KiB | 00m00s Copr repository 100% | 102.5 KiB/s | 1.5 KiB | 00m00s Repositories loaded. 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fedora 31.6 KiB texlive-fancyvrb noarch 11:svn65585-73.fc41 fedora 66.2 KiB texlive-filecontents noarch 11:svn52142-73.fc41 fedora 12.2 KiB texlive-filehook noarch 11:svn64822-73.fc41 fedora 55.2 KiB texlive-firstaid noarch 11:svn64892-73.fc41 fedora 296.9 KiB texlive-fix2col noarch 11:svn38770-73.fc41 fedora 16.7 KiB texlive-float noarch 11:svn15878.1.3d-73.fc41 fedora 15.5 KiB texlive-fncychap noarch 11:svn20710.v1.34-73.fc41 fedora 37.7 KiB texlive-fontspec noarch 11:svn63386-73.fc41 fedora 329.1 KiB texlive-footmisc noarch 11:svn62524-73.fc41 fedora 64.7 KiB texlive-fp noarch 11:svn49719-73.fc41 fedora 124.9 KiB texlive-fpl noarch 11:svn54512-73.fc41 fedora 647.6 KiB texlive-framed noarch 11:svn26789.0.96-73.fc41 fedora 21.9 KiB texlive-geometry noarch 11:svn61719-73.fc41 fedora 49.5 KiB texlive-gettitlestring noarch 11:svn53170-73.fc41 fedora 338.8 KiB texlive-glyphlist noarch 11:svn54074-85.fc41 fedora 90.3 KiB texlive-gnu-freefont noarch 11:svn29349.0-73.fc41 fedora 17.0 MiB texlive-graphics noarch 11:svn66204-73.fc41 fedora 124.5 KiB texlive-graphics-cfg noarch 11:svn41448-73.fc41 fedora 3.0 KiB texlive-graphics-def noarch 11:svn64487-73.fc41 fedora 98.2 KiB texlive-grfext noarch 11:svn53024-73.fc41 fedora 327.8 KiB texlive-grffile noarch 11:svn52756-73.fc41 fedora 379.3 KiB texlive-gsftopk x86_64 11:svn52851-85.fc41 fedora 47.1 KiB texlive-helvetic noarch 11:svn61719-73.fc41 fedora 1.8 MiB texlive-hobsub noarch 11:svn52810-73.fc41 fedora 80.2 KiB texlive-hologo noarch 11:svn61719-73.fc41 fedora 664.7 KiB texlive-hopatch noarch 11:svn65491-73.fc41 fedora 345.8 KiB texlive-hycolor noarch 11:svn53584-73.fc41 fedora 411.7 KiB texlive-hypdoc noarch 11:svn65678-73.fc41 fedora 358.3 KiB texlive-hyperref noarch 11:svn65758-73.fc41 fedora 763.7 KiB texlive-hyph-utf8 noarch 11:svn61719-73.fc41 fedora 73.9 KiB texlive-hyphen-base noarch 11:svn66413-73.fc41 fedora 63.7 KiB texlive-hyphenex noarch 11:svn57387-73.fc41 fedora 25.7 KiB texlive-ifmtarg noarch 11:svn47544-73.fc41 fedora 9.2 KiB texlive-ifplatform noarch 11:svn45533-73.fc41 fedora 12.7 KiB texlive-iftex noarch 11:svn61910-73.fc41 fedora 28.7 KiB texlive-index noarch 11:svn24099.4.1beta-73.fc41 fedora 60.6 KiB texlive-infwarerr noarch 11:svn53023-73.fc41 fedora 306.3 KiB texlive-intcalc noarch 11:svn53168-73.fc41 fedora 471.6 KiB texlive-kastrup noarch 11:svn15878.0-73.fc41 fedora 3.4 KiB texlive-knuth-lib noarch 11:svn57963-73.fc41 fedora 99.9 KiB texlive-knuth-local noarch 11:svn57963-73.fc41 fedora 106.3 KiB texlive-koma-script noarch 11:svn64685-73.fc41 fedora 9.9 MiB texlive-kpathsea x86_64 11:svn66209-85.fc41 fedora 2.1 MiB texlive-kvdefinekeys noarch 11:svn53193-73.fc41 fedora 314.2 KiB texlive-kvoptions noarch 11:svn63622-73.fc41 fedora 550.0 KiB texlive-kvsetkeys noarch 11:svn64632-73.fc41 fedora 427.4 KiB texlive-l3backend noarch 11:svn65573-73.fc41 fedora 1.1 MiB texlive-l3kernel noarch 11:svn66094-73.fc41 fedora 1.4 MiB texlive-l3packages noarch 11:svn65722-73.fc41 fedora 262.4 KiB texlive-latex noarch 11:svn65161-85.fc41 fedora 40.2 MiB texlive-latex-fonts noarch 11:svn28888.0-73.fc41 fedora 114.2 KiB texlive-latex-lab noarch 11:svn64892-73.fc41 fedora 2.3 MiB texlive-latexconfig noarch 11:svn53525-73.fc41 fedora 8.3 KiB texlive-letltxmacro noarch 11:svn53022-73.fc41 fedora 311.2 KiB texlive-lib x86_64 11:20230311-85.fc41 fedora 1.1 MiB texlive-listings noarch 11:svn66222-73.fc41 fedora 580.0 KiB texlive-lm noarch 11:svn65956-73.fc41 fedora 39.4 MiB texlive-lm-math noarch 11:svn36915.1.959-73.fc41 fedora 735.8 KiB texlive-logreq noarch 11:svn53003-73.fc41 fedora 26.3 KiB texlive-ltxcmds noarch 11:svn56421-73.fc41 fedora 424.3 KiB texlive-ltxmisc noarch 11:svn21927.0-73.fc41 fedora 44.0 KiB texlive-lua-alt-getopt noarch 11:svn56414-73.fc41 fedora 3.9 KiB texlive-lua-uni-algos noarch 11:svn62204-73.fc41 fedora 129.1 KiB texlive-luabidi noarch 11:svn54512-73.fc41 fedora 25.3 KiB texlive-luahbtex x86_64 11:svn66186-85.fc41 fedora 6.3 MiB texlive-lualatex-math noarch 11:svn61464-73.fc41 fedora 28.4 KiB texlive-lualibs noarch 11:svn64615-73.fc41 fedora 764.4 KiB texlive-luaotfload noarch 11:svn64616-85.fc41 fedora 8.2 MiB texlive-luatex x86_64 11:svn66967-85.fc41 fedora 9.1 MiB texlive-luatex85 noarch 11:svn41456-73.fc41 fedora 24.4 KiB texlive-luatexbase noarch 11:svn52663-73.fc41 fedora 12.8 KiB texlive-makecmds noarch 11:svn15878.0-73.fc41 fedora 11.1 KiB texlive-makeindex x86_64 11:svn62517-85.fc41 fedora 507.2 KiB texlive-manfnt-font noarch 11:svn45777-73.fc41 fedora 41.7 KiB texlive-marginnote noarch 11:svn48383-73.fc41 fedora 22.5 KiB texlive-marvosym noarch 11:svn29349.2.2a-73.fc41 fedora 185.6 KiB texlive-mathpazo noarch 11:svn52663-73.fc41 fedora 110.5 KiB texlive-memoir noarch 11:svn65040-73.fc41 fedora 480.4 KiB texlive-metafont x86_64 11:svn66186-85.fc41 fedora 801.9 KiB texlive-mflogo noarch 11:svn42428-73.fc41 fedora 12.0 KiB texlive-mflogo-font noarch 11:svn54512-73.fc41 fedora 37.9 KiB texlive-mfnfss noarch 11:svn46036-73.fc41 fedora 22.8 KiB texlive-mfware x86_64 11:svn66186-85.fc41 fedora 212.6 KiB texlive-minitoc noarch 11:svn61719-73.fc41 fedora 534.1 KiB texlive-modes noarch 11:svn61719-73.fc41 fedora 389.9 KiB texlive-mparhack noarch 11:svn59066-73.fc41 fedora 20.3 KiB texlive-mptopdf noarch 11:svn65952-85.fc41 fedora 151.3 KiB texlive-ms noarch 11:svn57473-73.fc41 fedora 18.4 KiB texlive-multido noarch 11:svn18302.1.42-73.fc41 fedora 18.5 KiB texlive-natbib noarch 11:svn20668.8.31b-73.fc41 fedora 132.7 KiB texlive-ncntrsbk noarch 11:svn61719-73.fc41 fedora 931.8 KiB texlive-needspace noarch 11:svn29601.1.3d-73.fc41 fedora 9.7 KiB texlive-notoccite noarch 11:svn18129.0-73.fc41 fedora 2.3 KiB texlive-oberdiek noarch 11:svn65521-85.fc41 fedora 12.3 MiB texlive-pagesel noarch 11:svn56105-73.fc41 fedora 354.7 KiB texlive-palatino noarch 11:svn61719-73.fc41 fedora 1.1 MiB texlive-paralist noarch 11:svn43021-73.fc41 fedora 23.4 KiB texlive-parallel noarch 11:svn15878.0-73.fc41 fedora 22.5 KiB texlive-parskip noarch 11:svn58358-73.fc41 fedora 15.7 KiB texlive-pdfcol noarch 11:svn64469-73.fc41 fedora 345.6 KiB texlive-pdfcolmk noarch 11:svn52912-73.fc41 fedora 19.6 KiB texlive-pdfescape noarch 11:svn53082-73.fc41 fedora 375.9 KiB texlive-pdftex x86_64 11:svn66243-85.fc41 fedora 4.6 MiB texlive-pdftexcmds noarch 11:svn55777-73.fc41 fedora 423.9 KiB texlive-pgf noarch 11:svn65553-73.fc41 fedora 4.8 MiB texlive-picture noarch 11:svn54867-73.fc41 fedora 323.3 KiB texlive-placeins noarch 11:svn19848.2.2-73.fc41 fedora 4.6 KiB texlive-plain noarch 11:svn57963-73.fc41 fedora 109.4 KiB texlive-polyglossia noarch 11:svn65792-73.fc41 fedora 715.0 KiB texlive-pslatex noarch 11:svn57434-73.fc41 fedora 26.9 KiB texlive-psnfss noarch 11:svn54694-73.fc41 fedora 101.0 KiB texlive-pspicture noarch 11:svn15878.0-73.fc41 fedora 13.6 KiB texlive-pst-3d noarch 11:svn17257.1.10-73.fc41 fedora 19.5 KiB texlive-pst-coil noarch 11:svn62977-73.fc41 fedora 20.4 KiB texlive-pst-eps noarch 11:svn15878.1.0-73.fc41 fedora 15.5 KiB texlive-pst-fill noarch 11:svn60671-73.fc41 fedora 22.8 KiB texlive-pst-grad noarch 11:svn15878.1.06-73.fc41 fedora 21.1 KiB texlive-pst-math noarch 11:svn64732-73.fc41 fedora 22.3 KiB texlive-pst-node noarch 11:svn61838-73.fc41 fedora 114.0 KiB texlive-pst-ovl noarch 11:svn54963-73.fc41 fedora 12.4 KiB texlive-pst-plot noarch 11:svn65346-73.fc41 fedora 129.7 KiB texlive-pst-text noarch 11:svn49542-73.fc41 fedora 19.7 KiB texlive-pst-tools noarch 11:svn60621-73.fc41 fedora 26.8 KiB texlive-pst-tree noarch 11:svn60421-73.fc41 fedora 42.6 KiB texlive-pstricks noarch 11:svn65346-73.fc41 fedora 468.9 KiB texlive-pstricks-add noarch 11:svn65067-73.fc41 fedora 103.4 KiB texlive-pxfonts noarch 11:svn15878.0-73.fc41 fedora 823.0 KiB texlive-ragged2e noarch 11:svn66152-73.fc41 fedora 731.9 KiB texlive-refcount noarch 11:svn53164-73.fc41 fedora 348.0 KiB texlive-rerunfilecheck noarch 11:svn63869-73.fc41 fedora 361.8 KiB texlive-rsfs noarch 11:svn15878.0-73.fc41 fedora 97.8 KiB texlive-sauerj noarch 11:svn15878.0-73.fc41 fedora 27.0 KiB texlive-setspace noarch 11:svn65206-73.fc41 fedora 22.0 KiB texlive-showexpl noarch 11:svn57414-73.fc41 fedora 21.8 KiB texlive-stringenc noarch 11:svn52982-73.fc41 fedora 1.0 MiB texlive-subfig noarch 11:svn15878.1.3-73.fc41 fedora 36.6 KiB texlive-symbol noarch 11:svn61719-73.fc41 fedora 78.3 KiB texlive-tabulary noarch 11:svn34368.0.10-73.fc41 fedora 22.3 KiB texlive-tex x86_64 11:svn66186-85.fc41 fedora 389.4 KiB texlive-tex-gyre noarch 11:svn65956-73.fc41 fedora 24.2 MiB texlive-tex-gyre-math noarch 11:svn41264-73.fc41 fedora 2.7 MiB texlive-tex-ini-files noarch 11:svn40533-73.fc41 fedora 8.1 KiB texlive-texlive-common-doc noarch 11:svn54176-73.fc41 fedora 265.5 KiB texlive-texlive-en noarch 11:svn66572-85.fc41 fedora 5.9 MiB texlive-texlive-msg-translations noarch 11:svn66593-73.fc41 fedora 1.4 MiB texlive-texlive-scripts noarch 11:svn66584-85.fc41 fedora 337.2 KiB texlive-texlive.infra noarch 11:svn66512-85.fc41 fedora 1.0 MiB texlive-times noarch 11:svn61719-73.fc41 fedora 992.2 KiB texlive-tipa noarch 11:svn29349.1.3-73.fc41 fedora 3.7 MiB texlive-titlesec noarch 11:svn59845-73.fc41 fedora 97.8 KiB texlive-tools noarch 11:svn64892-73.fc41 fedora 403.2 KiB texlive-txfonts noarch 11:svn15878.0-73.fc41 fedora 1.5 MiB texlive-ucharcat noarch 11:svn38907-73.fc41 fedora 10.2 KiB texlive-ucs noarch 11:svn64114-73.fc41 fedora 2.4 MiB texlive-underscore noarch 11:svn18261.0-73.fc41 fedora 19.3 KiB texlive-unicode-data noarch 11:svn64423-73.fc41 fedora 3.1 MiB texlive-unicode-math noarch 11:svn61719-73.fc41 fedora 517.2 KiB texlive-uniquecounter noarch 11:svn53162-73.fc41 fedora 312.0 KiB texlive-upquote noarch 11:svn26059.v1.3-73.fc41 fedora 15.1 KiB texlive-url noarch 11:svn32528.3.4-73.fc41 fedora 21.4 KiB texlive-utopia noarch 11:svn15878.0-73.fc41 fedora 540.6 KiB texlive-varwidth noarch 11:svn24104.0.92-73.fc41 fedora 19.5 KiB texlive-wasy noarch 11:svn53533-73.fc41 fedora 137.7 KiB texlive-wasy-type1 noarch 11:svn53534-73.fc41 fedora 332.4 KiB texlive-wasysym noarch 11:svn54080-73.fc41 fedora 23.9 KiB texlive-wrapfig noarch 11:svn61719-73.fc41 fedora 34.5 KiB texlive-xcolor noarch 11:svn63563-73.fc41 fedora 79.3 KiB texlive-xdvi x86_64 11:svn62387-85.fc41 fedora 743.4 KiB texlive-xetex x86_64 11:svn66203-85.fc41 fedora 2.1 MiB texlive-xetexconfig noarch 11:svn45845-73.fc41 fedora 305.0 B texlive-xifthen noarch 11:svn38929-73.fc41 fedora 14.4 KiB texlive-xkeyval noarch 11:svn63616-73.fc41 fedora 69.3 KiB texlive-xpatch noarch 11:svn54563-73.fc41 fedora 26.8 KiB texlive-xstring noarch 11:svn65551-73.fc41 fedora 56.1 KiB texlive-xunicode noarch 11:svn30466.0.981-73.fc41 fedora 219.6 KiB texlive-zapfchan noarch 11:svn61719-73.fc41 fedora 178.1 KiB texlive-zapfding noarch 11:svn61719-73.fc41 fedora 79.5 KiB texlive-zref noarch 11:svn62977-73.fc41 fedora 816.8 KiB tk x86_64 1:8.6.14-2.fc41 fedora 3.6 MiB tzdata noarch 2024a-9.fc41 fedora 1.7 MiB urw-base35-bookman-fonts noarch 20200910-23.fc41 fedora 1.4 MiB urw-base35-c059-fonts noarch 20200910-23.fc41 fedora 1.4 MiB urw-base35-d050000l-fonts noarch 20200910-23.fc41 fedora 84.3 KiB urw-base35-fonts noarch 20200910-23.fc41 fedora 5.3 KiB urw-base35-fonts-common noarch 20200910-23.fc41 fedora 37.4 KiB urw-base35-gothic-fonts noarch 20200910-23.fc41 fedora 1.2 MiB urw-base35-nimbus-mono-ps-fonts noarch 20200910-23.fc41 fedora 1.0 MiB urw-base35-nimbus-roman-fonts noarch 20200910-23.fc41 fedora 1.4 MiB urw-base35-nimbus-sans-fonts noarch 20200910-23.fc41 fedora 2.4 MiB urw-base35-p052-fonts noarch 20200910-23.fc41 fedora 1.5 MiB urw-base35-standard-symbols-ps-fonts noarch 20200910-23.fc41 fedora 64.9 KiB urw-base35-z003-fonts noarch 20200910-23.fc41 fedora 390.8 KiB xdg-utils noarch 1.2.1-2.fc41 fedora 346.3 KiB xml-common noarch 0.6.3-65.fc41 fedora 78.4 KiB xpdf-libs x86_64 1:4.05-5.fc41 fedora 1.7 MiB zziplib x86_64 0.13.74-2.fc41 fedora 233.7 KiB Transaction Summary: Installing: 654 packages Total size of inbound packages is 448 MiB. Need to download 448 MiB. After this operation, 1 GiB extra will be used (install 1 GiB, remove 0 B). [ 1/654] make-1:4.4.1-8.fc41.x86_64 100% | 38.2 MiB/s | 586.1 KiB | 00m00s [ 2/654] hdf5-0:1.12.1-20.fc41.x86_64 100% | 117.7 MiB/s | 2.2 MiB | 00m00s [ 3/654] python3-devel-0:3.13.0-1.fc41 100% | 56.2 MiB/s | 402.5 KiB | 00m00s [ 4/654] python3-sphinx-latex-1:7.3.7- 100% | 1.5 MiB/s | 11.0 KiB | 00m00s [ 5/654] latexmk-0:4.85-2.fc41.noarch 100% | 9.4 MiB/s | 453.5 KiB | 00m00s [ 6/654] python3-deap-0:1.4.1-7.fc41.x 100% | 9.8 MiB/s | 220.1 KiB | 00m00s [ 7/654] python3-sphinx-1:7.3.7-4.fc41 100% | 191.8 MiB/s | 2.5 MiB | 00m00s [ 8/654] python3-matplotlib-0:3.9.1-2. 100% | 211.3 MiB/s | 4.6 MiB | 00m00s [ 9/654] perl-Digest-MD5-0:2.59-5.fc41 100% | 7.0 MiB/s | 36.0 KiB | 00m00s [ 10/654] perl-File-Path-0:2.18-511.fc4 100% | 17.2 MiB/s | 35.3 KiB | 00m00s [ 11/654] perl-PathTools-0:3.91-511.fc4 100% | 85.4 MiB/s | 87.4 KiB | 00m00s [ 12/654] perl-Time-HiRes-4:1.9777-511. 100% | 28.0 MiB/s | 57.3 KiB | 00m00s [ 13/654] perl-Unicode-Normalize-0:1.32 100% | 36.2 MiB/s | 74.2 KiB | 00m00s [ 14/654] xdg-utils-0:1.2.1-2.fc41.noar 100% | 25.8 MiB/s | 79.3 KiB | 00m00s [ 15/654] libaec-0:1.1.3-1.fc41.x86_64 100% | 18.3 MiB/s | 37.4 KiB | 00m00s [ 16/654] libgfortran-0:14.2.1-3.fc41.x 100% | 229.3 MiB/s | 939.1 KiB | 00m00s [ 17/654] python3-brian2-0:2.7.1-2.fc41 100% | 23.7 MiB/s | 1.7 MiB | 00m00s [ 18/654] python3-libs-0:3.13.0-1.fc41. 100% | 267.6 MiB/s | 9.1 MiB | 00m00s [ 19/654] texlive-amsmath-11:svn63514-7 100% | 2.7 MiB/s | 44.6 KiB | 00m00s [ 20/654] texlive-amscls-11:svn55378-73 100% | 20.2 MiB/s | 1.1 MiB | 00m00s [ 21/654] texlive-anyfontsize-11:svn170 100% | 1.0 MiB/s | 14.4 KiB | 00m00s [ 22/654] texlive-capt-of-11:svn29803.0 100% | 1.2 MiB/s | 13.1 KiB | 00m00s [ 23/654] texlive-cmap-11:svn57640-73.f 100% | 2.1 MiB/s | 19.6 KiB | 00m00s [ 24/654] texlive-collection-fontsrecom 100% | 1.2 MiB/s | 9.5 KiB | 00m00s [ 25/654] texlive-collection-latex-11:s 100% | 760.0 KiB/s | 9.9 KiB | 00m00s [ 26/654] texlive-ctablestack-11:svn385 100% | 1.1 MiB/s | 16.2 KiB | 00m00s [ 27/654] texlive-dvipng-11:svn66203-85 100% | 10.9 MiB/s | 313.9 KiB | 00m00s [ 28/654] texlive-dvisvgm-11:svn66532-8 100% | 44.1 MiB/s | 1.4 MiB | 00m00s [ 29/654] texlive-latex-11:svn65161-85. 100% | 174.8 MiB/s | 29.9 MiB | 00m00s [ 30/654] texlive-fancyhdr-11:svn64977- 100% | 420.1 KiB/s | 17.6 KiB | 00m00s [ 31/654] texlive-fancyvrb-11:svn65585- 100% | 817.6 KiB/s | 24.5 KiB | 00m00s [ 32/654] texlive-fncychap-11:svn20710. 100% | 2.1 MiB/s | 19.8 KiB | 00m00s [ 33/654] texlive-geometry-11:svn61719- 100% | 1.7 MiB/s | 21.1 KiB | 00m00s [ 34/654] texlive-framed-11:svn26789.0. 100% | 981.4 KiB/s | 16.7 KiB | 00m00s [ 35/654] texlive-hyperref-11:svn65758- 100% | 7.1 MiB/s | 116.9 KiB | 00m00s [ 36/654] texlive-luatex85-11:svn41456- 100% | 1.2 MiB/s | 16.7 KiB | 00m00s [ 37/654] texlive-kvoptions-11:svn63622 100% | 16.6 MiB/s | 491.6 KiB | 00m00s [ 38/654] texlive-parskip-11:svn58358-7 100% | 1.6 MiB/s | 14.9 KiB | 00m00s [ 39/654] texlive-needspace-11:svn29601 100% | 1.1 MiB/s 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| 169.3 MiB/s | 173.4 KiB | 00m00s [225/656] Installing perl-Mail-Sender-1 100% | 158.6 MiB/s | 162.5 KiB | 00m00s [226/656] Installing perl-Sys-Syslog-0: 100% | 94.7 MiB/s | 97.0 KiB | 00m00s [227/656] Installing perl-IPC-System-Si 100% | 71.8 MiB/s | 73.5 KiB | 00m00s [228/656] Installing perl-Tie-RefHash-0 100% | 36.5 MiB/s | 37.4 KiB | 00m00s [229/656] Installing perl-autodie-0:2.3 100% | 214.0 MiB/s | 219.1 KiB | 00m00s [230/656] Installing perl-Compress-Raw- 100% | 70.1 MiB/s | 71.8 KiB | 00m00s [231/656] Installing perl-IO-Compress-0 100% | 257.3 MiB/s | 1.0 MiB | 00m00s [232/656] Installing perl-HTTP-Message- 100% | 214.8 MiB/s | 219.9 KiB | 00m00s [233/656] Installing perl-HTML-Parser-0 100% | 140.5 MiB/s | 287.8 KiB | 00m00s [234/656] Installing perl-HTTP-Negotiat 100% | 0.0 B/s | 28.7 KiB | 00m00s [235/656] Installing perl-Net-HTTP-0:6. 100% | 75.4 MiB/s | 77.2 KiB | 00m00s [236/656] Installing perl-HTTP-Cookies- 100% | 73.9 MiB/s | 75.7 KiB | 00m00s [237/656] Installing perl-libwww-perl-0 100% | 172.6 MiB/s | 530.3 KiB | 00m00s [238/656] Installing perl-XML-Parser-0: 100% | 216.1 MiB/s | 663.7 KiB | 00m00s [239/656] Installing perl-LWP-Protocol- 100% | 30.4 MiB/s | 31.1 KiB | 00m00s [240/656] Installing perl-XML-SAX-0:1.0 100% | 2.6 MiB/s | 126.0 KiB | 00m00s [241/656] Installing perl-XML-LibXML-1: 100% | 10.8 MiB/s | 931.5 KiB | 00m00s [242/656] Installing perl-XML-LibXML-Si 100% | 51.1 MiB/s | 52.3 KiB | 00m00s [243/656] Installing perl-XML-LibXSLT-0 100% | 71.6 MiB/s | 146.6 KiB | 00m00s [244/656] Installing perl-Class-Data-In 100% | 0.0 B/s | 7.0 KiB | 00m00s [245/656] Installing perl-Exception-Cla 100% | 92.4 MiB/s | 94.6 KiB | 00m00s [246/656] Installing perl-Ref-Util-XS-0 100% | 43.7 MiB/s | 44.7 KiB | 00m00s [247/656] Installing perl-Ref-Util-0:0. 100% | 32.4 MiB/s | 33.2 KiB | 00m00s [248/656] Installing perl-Class-Method- 100% | 107.0 MiB/s | 109.6 KiB | 00m00s [249/656] Installing perl-Role-Tiny-0:2 100% | 62.0 MiB/s | 63.5 KiB | 00m00s [250/656] Installing perl-Variable-Magi 100% | 129.6 MiB/s | 132.7 KiB | 00m00s [251/656] Installing perl-GSSAPI-0:0.28 100% | 121.4 MiB/s | 124.3 KiB | 00m00s [252/656] Installing perl-Email-Date-Fo 100% | 25.4 MiB/s | 26.0 KiB | 00m00s [253/656] Installing perl-MIME-Types-0: 100% | 180.0 MiB/s | 184.3 KiB | 00m00s [254/656] Installing perl-MIME-Lite-0:3 100% | 243.1 MiB/s | 248.9 KiB | 00m00s [255/656] Installing perl-Net-SMTP-SSL- 100% | 0.0 B/s | 5.3 KiB | 00m00s [256/656] Installing perl-MailTools-0:2 100% | 103.8 MiB/s | 212.7 KiB | 00m00s [257/656] Installing perl-Package-Stash 100% | 69.4 MiB/s | 71.0 KiB | 00m00s [258/656] Installing perl-Package-Stash 100% | 56.8 MiB/s | 58.1 KiB | 00m00s [259/656] Installing perl-DynaLoader-Fu 100% | 20.3 MiB/s | 20.7 KiB | 00m00s [260/656] Installing perl-Devel-CallChe 100% | 38.3 MiB/s | 39.2 KiB | 00m00s [261/656] Installing perl-Params-Classi 100% | 48.4 MiB/s | 49.6 KiB | 00m00s [262/656] Installing perl-DateTime-Time 100% | 0.0 B/s | 29.6 KiB | 00m00s [263/656] Installing perl-DateTime-Time 100% | 0.0 B/s | 25.8 KiB | 00m00s [264/656] Installing perl-PadWalker-0:2 100% | 45.6 MiB/s | 46.7 KiB | 00m00s [265/656] Installing perl-Devel-Caller- 100% | 28.4 MiB/s | 29.1 KiB | 00m00s [266/656] Installing perl-Devel-LexAlia 100% | 20.5 MiB/s | 21.0 KiB | 00m00s [267/656] Installing perl-Package-Gener 100% | 30.8 MiB/s | 31.6 KiB | 00m00s [268/656] Installing perl-Sub-Exporter- 100% | 98.6 MiB/s | 201.9 KiB | 00m00s [269/656] Installing perl-Sub-Exporter- 100% | 0.0 B/s | 28.9 KiB | 00m00s [270/656] Installing perl-Devel-GlobalD 100% | 18.6 MiB/s | 19.0 KiB | 00m00s [271/656] Installing perl-English-0:1.1 100% | 0.0 B/s | 6.6 KiB | 00m00s [272/656] Installing perltidy-0:2024090 100% | 388.8 MiB/s | 3.9 MiB | 00m00s [273/656] Installing perl-Eval-Closure- 100% | 33.8 MiB/s | 34.6 KiB | 00m00s [274/656] Installing perl-Params-Valida 100% | 92.0 MiB/s | 94.2 KiB | 00m00s [275/656] Installing perl-Specio-0:0.48 100% | 112.2 MiB/s | 344.7 KiB | 00m00s [276/656] Installing perl-Filter-2:1.64 100% | 85.3 MiB/s | 174.6 KiB | 00m00s [277/656] Installing perl-encoding-4:3. 100% | 146.9 MiB/s | 150.4 KiB | 00m00s [278/656] Installing perl-open-0:1.13-5 100% | 0.0 B/s | 11.7 KiB | 00m00s [279/656] Installing perl-XML-XPath-0:1 100% | 102.6 MiB/s | 210.1 KiB | 00m00s [280/656] Installing texlive-epstopdf-1 100% | 39.6 MiB/s | 40.6 KiB | 00m00s [281/656] Installing texlive-epstopdf-p 100% | 189.4 MiB/s | 388.0 KiB | 00m00s [282/656] Installing texlive-cm-11:svn5 100% | 167.9 MiB/s | 1.0 MiB | 00m00s [283/656] Installing texlive-etex-11:sv 100% | 41.7 MiB/s | 42.7 KiB | 00m00s [284/656] Installing texlive-hyph-utf8- 100% | 74.8 MiB/s | 76.6 KiB | 00m00s [285/656] Installing texlive-hyphen-bas 100% | 64.3 MiB/s | 65.9 KiB | 00m00s [286/656] Installing texlive-knuth-lib- 100% | 103.8 MiB/s | 106.3 KiB | 00m00s [287/656] Installing texlive-plain-11:s 100% | 111.1 MiB/s | 113.8 KiB | 00m00s [288/656] Installing texlive-tex-ini-fi 100% | 0.0 B/s | 10.1 KiB | 00m00s [289/656] Installing texlive-unicode-da 100% | 438.7 MiB/s | 3.1 MiB | 00m00s [290/656] Installing texlive-graphics-d 100% | 97.5 MiB/s | 99.9 KiB | 00m00s [291/656] Installing texlive-luatex-11: 100% | 397.5 MiB/s | 9.1 MiB | 00m00s [292/656] Installing texlive-gsftopk-11 100% | 47.4 MiB/s | 48.6 KiB | 00m00s [293/656] Installing texlive-texlive.in 100% | 251.7 MiB/s | 1.0 MiB | 00m00s [294/656] Installing texlive-texlive-sc 100% | 113.6 MiB/s | 349.1 KiB | 00m00s [295/656] Installing texlive-kpathsea-1 100% | 415.5 MiB/s | 2.1 MiB | 00m00s [296/656] Installing texlive-iftex-11:s 100% | 0.0 B/s | 30.3 KiB | 00m00s [297/656] Installing texlive-amsmath-11 100% | 262.4 MiB/s | 268.7 KiB | 00m00s [298/656] Installing texlive-kvoptions- 100% | 538.7 MiB/s | 551.6 KiB | 00m00s [299/656] Installing texlive-url-11:svn 100% | 0.0 B/s | 22.1 KiB | 00m00s [300/656] Installing texlive-ltxcmds-11 100% | 415.6 MiB/s | 425.5 KiB | 00m00s [301/656] Installing texlive-atbegshi-1 100% | 434.6 MiB/s | 445.1 KiB | 00m00s [302/656] Installing texlive-atveryend- 100% | 133.8 MiB/s | 411.2 KiB | 00m00s [303/656] Installing texlive-babel-11:s 100% | 69.4 MiB/s | 2.2 MiB | 00m00s [304/656] Installing texlive-pdftexcmds 100% | 415.6 MiB/s | 425.6 KiB | 00m00s [305/656] Installing texlive-etex-pkg-1 100% | 0.0 B/s | 19.0 KiB | 00m00s [306/656] Installing texlive-etoolbox-1 100% | 66.1 MiB/s | 67.7 KiB | 00m00s [307/656] Installing texlive-latex-font 100% | 40.4 MiB/s | 124.2 KiB | 00m00s [308/656] Installing texlive-amsfonts-1 100% | 251.7 MiB/s | 6.0 MiB | 00m00s [309/656] Installing texlive-lm-11:svn6 100% | 454.5 MiB/s | 39.5 MiB | 00m00s [310/656] Installing texlive-auxhook-11 100% | 296.1 MiB/s | 303.2 KiB | 00m00s [311/656] Installing texlive-etexcmds-1 100% | 314.7 MiB/s | 322.3 KiB | 00m00s [312/656] Installing texlive-fancyhdr-1 100% | 0.0 B/s | 32.7 KiB | 00m00s [313/656] Installing texlive-hypdoc-11: 100% | 351.1 MiB/s | 359.5 KiB | 00m00s [314/656] Installing texlive-marvosym-1 100% | 91.9 MiB/s | 188.3 KiB | 00m00s [315/656] Installing texlive-palatino-1 100% | 160.1 MiB/s | 1.1 MiB | 00m00s [316/656] Installing texlive-zapfding-1 100% | 80.8 MiB/s | 82.7 KiB | 00m00s [317/656] Installing texlive-bigintcalc 100% | 504.7 MiB/s | 516.8 KiB | 00m00s [318/656] Installing texlive-graphics-c 100% | 0.0 B/s | 3.9 KiB | 00m00s [319/656] Installing texlive-graphics-1 100% | 125.6 MiB/s | 128.7 KiB | 00m00s [320/656] Installing texlive-tools-11:s 100% | 201.0 MiB/s | 411.7 KiB | 00m00s [321/656] Installing texlive-xkeyval-11 100% | 69.9 MiB/s | 71.6 KiB | 00m00s [322/656] Installing texlive-geometry-1 100% | 0.0 B/s | 50.2 KiB | 00m00s [323/656] Installing texlive-colortbl-1 100% | 0.0 B/s | 21.8 KiB | 00m00s [324/656] Installing texlive-intcalc-11 100% | 461.7 MiB/s | 472.8 KiB | 00m00s [325/656] Installing texlive-kvsetkeys- 100% | 418.8 MiB/s | 428.8 KiB | 00m00s [326/656] Installing texlive-l3backend- 100% | 553.5 MiB/s | 1.1 MiB | 00m00s [327/656] Installing texlive-letltxmacr 100% | 305.3 MiB/s | 312.6 KiB | 00m00s [328/656] Installing texlive-natbib-11: 100% | 131.1 MiB/s | 134.2 KiB | 00m00s [329/656] Installing texlive-pdfescape- 100% | 368.3 MiB/s | 377.2 KiB | 00m00s [330/656] Installing texlive-uniquecoun 100% | 306.1 MiB/s | 313.5 KiB | 00m00s [331/656] Installing texlive-infwarerr- 100% | 300.3 MiB/s | 307.5 KiB | 00m00s [332/656] Installing texlive-booktabs-1 100% | 0.0 B/s | 19.0 KiB | 00m00s [333/656] Installing texlive-fp-11:svn4 100% | 124.9 MiB/s | 127.9 KiB | 00m00s [334/656] Installing texlive-footmisc-1 100% | 0.0 B/s | 65.6 KiB | 00m00s [335/656] Installing texlive-multido-11 100% | 0.0 B/s | 19.6 KiB | 00m00s [336/656] Installing texlive-catchfile- 100% | 312.5 MiB/s | 320.0 KiB | 00m00s [337/656] Installing texlive-ifplatform 100% | 0.0 B/s | 13.5 KiB | 00m00s [338/656] Installing texlive-rerunfilec 100% | 354.8 MiB/s | 363.3 KiB | 00m00s [339/656] Installing texlive-carlisle-1 100% | 0.0 B/s | 32.8 KiB | 00m00s [340/656] Installing texlive-caption-11 100% | 445.6 MiB/s | 912.6 KiB | 00m00s [341/656] Installing texlive-csquotes-1 100% | 110.6 MiB/s | 113.3 KiB | 00m00s [342/656] Installing texlive-sauerj-11: 100% | 0.0 B/s | 28.6 KiB | 00m00s [343/656] Installing texlive-bitset-11: 100% | 648.0 MiB/s | 663.5 KiB | 00m00s [344/656] Installing texlive-babelbib-1 100% | 384.4 MiB/s | 787.2 KiB | 00m00s [345/656] Installing texlive-ctablestac 100% | 0.0 B/s | 20.9 KiB | 00m00s [346/656] Installing texlive-luatexbase 100% | 0.0 B/s | 15.1 KiB | 00m00s [347/656] Installing texlive-titlesec-1 100% | 0.0 B/s | 98.9 KiB | 00m00s [348/656] Installing texlive-latexconfi 100% | 9.6 MiB/s | 9.8 KiB | 00m00s [349/656] Installing texlive-avantgar-1 100% | 207.0 MiB/s | 1.2 MiB | 00m00s [350/656] Installing texlive-bookman-11 100% | 205.6 MiB/s | 1.2 MiB | 00m00s [351/656] Installing texlive-charter-11 100% | 202.6 MiB/s | 415.0 KiB | 00m00s [352/656] Installing texlive-courier-11 100% | 228.8 MiB/s | 937.1 KiB | 00m00s [353/656] Installing texlive-fpl-11:svn 100% | 317.9 MiB/s | 651.2 KiB | 00m00s [354/656] Installing texlive-mathpazo-1 100% | 57.0 MiB/s | 116.7 KiB | 00m00s [355/656] Installing texlive-helvetic-1 100% | 203.1 MiB/s | 1.8 MiB | 00m00s [356/656] Installing texlive-lm-math-11 100% | 239.9 MiB/s | 736.9 KiB | 00m00s [357/656] Installing texlive-symbol-11: 100% | 40.0 MiB/s | 82.0 KiB | 00m00s [358/656] Installing texlive-times-11:s 100% | 166.4 MiB/s | 1.0 MiB | 00m00s [359/656] Installing texlive-utopia-11: 100% | 179.5 MiB/s | 551.4 KiB | 00m00s [360/656] Installing texlive-psnfss-11: 100% | 38.9 MiB/s | 119.5 KiB | 00m00s [361/656] Installing texlive-wasy-11:sv 100% | 27.7 MiB/s | 142.1 KiB | 00m00s [362/656] Installing texlive-bookmark-1 100% | 558.8 MiB/s | 572.2 KiB | 00m00s [363/656] Installing texlive-firstaid-1 100% | 291.8 MiB/s | 298.8 KiB | 00m00s [364/656] Installing texlive-gettitlest 100% | 332.2 MiB/s | 340.1 KiB | 00m00s [365/656] Installing texlive-grfext-11: 100% | 321.3 MiB/s | 329.1 KiB | 00m00s [366/656] Installing texlive-hycolor-11 100% | 403.5 MiB/s | 413.1 KiB | 00m00s [367/656] Installing texlive-kvdefineke 100% | 308.1 MiB/s | 315.5 KiB | 00m00s [368/656] Installing texlive-refcount-1 100% | 341.0 MiB/s | 349.2 KiB | 00m00s [369/656] Installing texlive-stringenc- 100% | 351.4 MiB/s | 1.1 MiB | 00m00s [370/656] Installing texlive-hologo-11: 100% | 650.5 MiB/s | 666.1 KiB | 00m00s [371/656] Installing texlive-glyphlist- 100% | 0.0 B/s | 91.1 KiB | 00m00s [372/656] Installing texlive-lua-alt-ge 100% | 0.0 B/s | 4.3 KiB | 00m00s [373/656] Installing texlive-modes-11:s 100% | 382.8 MiB/s | 391.9 KiB | 00m00s [374/656] Installing texlive-zref-11:sv 100% | 401.4 MiB/s | 822.0 KiB | 00m00s [375/656] Installing texlive-paralist-1 100% | 0.0 B/s | 24.1 KiB | 00m00s [376/656] Installing texlive-ragged2e-1 100% | 716.1 MiB/s | 733.3 KiB | 00m00s [377/656] Installing texlive-setspace-1 100% | 0.0 B/s | 22.4 KiB | 00m00s [378/656] Installing texlive-placeins-1 100% | 0.0 B/s | 5.4 KiB | 00m00s [379/656] Installing texlive-wasy-type1 100% | 328.8 MiB/s | 336.7 KiB | 00m00s [380/656] Installing texlive-subfig-11: 100% | 0.0 B/s | 37.5 KiB | 00m00s [381/656] Installing texlive-auto-pst-p 100% | 0.0 B/s | 15.6 KiB | 00m00s [382/656] Installing texlive-euro-11:sv 100% | 0.0 B/s | 15.9 KiB | 00m00s [383/656] Installing texlive-breakurl-1 100% | 0.0 B/s | 17.9 KiB | 00m00s [384/656] Installing texlive-tabulary-1 100% | 0.0 B/s | 23.1 KiB | 00m00s [385/656] Installing texlive-fncychap-1 100% | 0.0 B/s | 38.4 KiB | 00m00s [386/656] Installing texlive-logreq-11: 100% | 26.6 MiB/s | 27.2 KiB | 00m00s [387/656] Installing texlive-dvips-11:s 100% | 263.6 MiB/s | 1.6 MiB | 00m00s [388/656] Installing texlive-memoir-11: 100% | 472.3 MiB/s | 483.6 KiB | 00m00s [389/656] Installing texlive-hopatch-11 100% | 113.0 MiB/s | 347.2 KiB | 00m00s [390/656] Installing texlive-tex-gyre-1 100% | 406.5 MiB/s | 24.4 MiB | 00m00s [391/656] Installing texlive-anyfontsiz 100% | 0.0 B/s | 13.4 KiB | 00m00s [392/656] Installing texlive-capt-of-11 100% | 0.0 B/s | 10.9 KiB | 00m00s [393/656] Installing texlive-cmap-11:sv 100% | 37.9 MiB/s | 38.8 KiB | 00m00s [394/656] Installing texlive-framed-11: 100% | 21.8 MiB/s | 22.4 KiB | 00m00s [395/656] Installing texlive-gnu-freefo 100% | 308.8 MiB/s | 17.0 MiB | 00m00s [396/656] Installing texlive-luatex85-1 100% | 0.0 B/s | 25.1 KiB | 00m00s [397/656] Installing texlive-needspace- 100% | 0.0 B/s | 10.5 KiB | 00m00s [398/656] Installing texlive-parskip-11 100% | 0.0 B/s | 16.7 KiB | 00m00s [399/656] Installing texlive-wrapfig-11 100% | 0.0 B/s | 35.2 KiB | 00m00s [400/656] Installing texlive-cmextra-11 100% | 138.4 MiB/s | 141.8 KiB | 00m00s [401/656] Installing texlive-euro-ce-11 100% | 46.0 MiB/s | 47.1 KiB | 00m00s [402/656] Installing texlive-eurosym-11 100% | 219.4 MiB/s | 224.7 KiB | 00m00s [403/656] Installing texlive-manfnt-fon 100% | 0.0 B/s | 43.1 KiB | 00m00s [404/656] Installing texlive-mflogo-fon 100% | 41.0 MiB/s | 42.0 KiB | 00m00s [405/656] Installing texlive-ncntrsbk-1 100% | 156.0 MiB/s | 958.2 KiB | 00m00s [406/656] Installing texlive-pxfonts-11 100% | 166.7 MiB/s | 853.5 KiB | 00m00s [407/656] Installing texlive-rsfs-11:sv 100% | 99.8 MiB/s | 102.2 KiB | 00m00s [408/656] Installing texlive-tex-gyre-m 100% | 297.2 MiB/s | 2.7 MiB | 00m00s [409/656] Installing texlive-txfonts-11 100% | 170.2 MiB/s | 1.5 MiB | 00m00s [410/656] Installing texlive-wasysym-11 100% | 0.0 B/s | 25.0 KiB | 00m00s [411/656] Installing texlive-zapfchan-1 100% | 90.3 MiB/s | 185.0 KiB | 00m00s [412/656] Installing texlive-babel-engl 100% | 0.0 B/s | 46.5 KiB | 00m00s [413/656] Installing texlive-fix2col-11 100% | 0.0 B/s | 17.4 KiB | 00m00s [414/656] Installing texlive-latex-lab- 100% | 577.7 MiB/s | 2.3 MiB | 00m00s [415/656] Installing texlive-mfnfss-11: 100% | 0.0 B/s | 24.7 KiB | 00m00s [416/656] Installing texlive-mptopdf-11 100% | 149.9 MiB/s | 153.5 KiB | 00m00s [417/656] Installing texlive-pagesel-11 100% | 347.7 MiB/s | 356.1 KiB | 00m00s [418/656] Installing texlive-pslatex-11 100% | 28.5 MiB/s | 29.2 KiB | 00m00s [419/656] Installing texlive-pspicture- 100% | 0.0 B/s | 14.7 KiB | 00m00s [420/656] Installing texlive-hobsub-11: 100% | 80.0 MiB/s | 81.9 KiB | 00m00s [421/656] Installing texlive-hyperref-1 100% | 375.7 MiB/s | 769.4 KiB | 00m00s [422/656] Installing texlive-attachfile 100% | 0.0 B/s | 33.2 KiB | 00m00s [423/656] Installing texlive-luabidi-11 100% | 0.0 B/s | 26.8 KiB | 00m00s [424/656] Installing texlive-makecmds-1 100% | 0.0 B/s | 11.9 KiB | 00m00s [425/656] Installing texlive-alphalph-1 100% | 368.3 MiB/s | 377.1 KiB | 00m00s [426/656] Installing texlive-enumitem-1 100% | 0.0 B/s | 60.1 KiB | 00m00s [427/656] Installing texlive-underscore 100% | 0.0 B/s | 20.1 KiB | 00m00s [428/656] Installing texlive-dehyph-11: 100% | 235.5 MiB/s | 241.2 KiB | 00m00s [429/656] Installing texlive-bibtex-11: 100% | 384.3 MiB/s | 787.0 KiB | 00m00s [430/656] Installing texlive-colorprofi 100% | 53.5 MiB/s | 274.1 KiB | 00m00s [431/656] Installing texlive-ec-11:svn2 100% | 106.7 MiB/s | 2.7 MiB | 00m00s [432/656] Installing texlive-enctex-11: 100% | 91.5 MiB/s | 187.3 KiB | 00m00s [433/656] Installing texlive-hyphenex-1 100% | 0.0 B/s | 26.1 KiB | 00m00s [434/656] Installing texlive-knuth-loca 100% | 110.4 MiB/s | 113.1 KiB | 00m00s [435/656] Installing texlive-luahbtex-1 100% | 372.8 MiB/s | 6.3 MiB | 00m00s [436/656] Installing texlive-makeindex- 100% | 250.0 MiB/s | 511.9 KiB | 00m00s [437/656] Installing texlive-mflogo-11: 100% | 13.3 MiB/s | 13.6 KiB | 00m00s [438/656] Installing texlive-mfware-11: 100% | 106.1 MiB/s | 217.4 KiB | 00m00s [439/656] Installing texlive-tex-11:svn 100% | 190.8 MiB/s | 390.8 KiB | 00m00s [440/656] Installing texlive-texlive-en 100% | 593.8 MiB/s | 5.9 MiB | 00m00s [441/656] Installing texlive-texlive-ms 100% | 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Installing texlive-koma-scrip 100% | 496.6 MiB/s | 9.9 MiB | 00m00s [558/656] Installing texlive-polyglossi 100% | 106.7 MiB/s | 764.6 KiB | 00m00s [559/656] Installing texlive-biblatex-1 100% | 272.7 MiB/s | 2.2 MiB | 00m00s [560/656] Installing texlive-bidi-11:sv 100% | 198.6 MiB/s | 1.2 MiB | 00m00s [561/656] Installing texlive-showexpl-1 100% | 0.0 B/s | 22.6 KiB | 00m00s [562/656] Installing texlive-listings-1 100% | 284.6 MiB/s | 582.9 KiB | 00m00s [563/656] Installing texlive-fancyvrb-1 100% | 0.0 B/s | 67.5 KiB | 00m00s [564/656] Installing texlive-pst-3d-11: 100% | 20.4 MiB/s | 20.9 KiB | 00m00s [565/656] Installing texlive-pst-coil-1 100% | 0.0 B/s | 21.8 KiB | 00m00s [566/656] Installing texlive-pst-eps-11 100% | 0.0 B/s | 16.6 KiB | 00m00s [567/656] Installing texlive-pst-fill-1 100% | 0.0 B/s | 23.9 KiB | 00m00s [568/656] Installing texlive-pst-grad-1 100% | 0.0 B/s | 22.5 KiB | 00m00s [569/656] Installing texlive-pst-node-1 100% | 113.0 MiB/s | 115.8 KiB | 00m00s 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python3-contourpy- 100% | 200.5 MiB/s | 821.2 KiB | 00m00s [622/656] Installing python3-imagesize- 100% | 37.4 MiB/s | 38.3 KiB | 00m00s [623/656] Installing python3-snowballst 100% | 290.7 MiB/s | 1.7 MiB | 00m00s [624/656] Installing python3-sphinx-the 100% | 11.3 MiB/s | 46.4 KiB | 00m00s [625/656] Installing python3-babel-0:2. 100% | 306.5 MiB/s | 28.5 MiB | 00m00s [626/656] Installing python3-docutils-0 100% | 219.4 MiB/s | 5.0 MiB | 00m00s [627/656] Installing python3-pygments-0 100% | 264.5 MiB/s | 10.8 MiB | 00m00s [628/656] Installing python3-charset-no 100% | 162.1 MiB/s | 332.0 KiB | 00m00s [629/656] Installing python3-requests-0 100% | 162.1 MiB/s | 498.0 KiB | 00m00s [630/656] Installing python3-markupsafe 100% | 63.9 MiB/s | 65.5 KiB | 00m00s [631/656] Installing python3-jinja2-0:3 100% | 290.6 MiB/s | 2.9 MiB | 00m00s [632/656] Installing python3-sphinx-1:7 100% | 229.7 MiB/s | 11.0 MiB | 00m00s [633/656] Installing python3-olefile-0: 100% | 167.8 MiB/s | 343.6 KiB | 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236.4 MiB/s | 484.2 KiB | 00m00s [647/656] Installing python3-matplotlib 100% | 64.8 MiB/s | 265.3 KiB | 00m00s [648/656] Installing python3-matplotlib 100% | 309.2 MiB/s | 21.3 MiB | 00m00s [649/656] Installing libaec-0:1.1.3-1.f 100% | 98.1 MiB/s | 100.5 KiB | 00m00s [650/656] Installing hdf5-0:1.12.1-20.f 100% | 335.7 MiB/s | 8.4 MiB | 00m00s [651/656] Installing python3-brian2-0:2 100% | 276.8 MiB/s | 9.4 MiB | 00m00s [652/656] Installing python3-sphinx-lat 100% | 121.1 KiB/s | 124.0 B | 00m00s [653/656] Installing python3-devel-0:3. 100% | 181.4 MiB/s | 1.8 MiB | 00m00s [654/656] Installing python3-deap-0:1.4 100% | 223.0 MiB/s | 913.6 KiB | 00m00s [655/656] Installing latexmk-0:4.85-2.f 100% | 244.2 MiB/s | 1.0 MiB | 00m00s [656/656] Installing make-1:4.4.1-8.fc4 100% | 51.8 KiB/s | 1.8 MiB | 00m36s Warning: skipped PGP checks for 23 packages from repository: copr_base Complete! Finish: build setup for python-pypet-0.6.1-8.fc41.src.rpm Start: rpmbuild python-pypet-0.6.1-8.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1732665600 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.QvGFiI + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + test -d /builddir/build/BUILD/python-pypet-0.6.1-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-pypet-0.6.1-build + /usr/bin/rm -rf /builddir/build/BUILD/python-pypet-0.6.1-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.U64X02 + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd /builddir/build/BUILD/python-pypet-0.6.1-build + rm -rf pypet-0.6.1 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/pypet-0.6.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd pypet-0.6.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/69.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/70.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/71.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/73.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + rm -rf pypet.egg-info + find . -type f -name .gitignore -print -delete ./.gitignore ./examples/.gitignore ./examples/example_17_wrapping_an_existing_project/.gitignore ./examples/example_24_large_scale_brian2_simulation/.gitignore ./pylint/.gitignore + mkdir -p _clean + cp -rp examples _clean/examples + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.d0zjcs + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd pypet-0.6.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir --output /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) Handling wheel from default build backend Requirement not satisfied: wheel Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pypet-0.6.1-8.fc41.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 109.8 KiB/s | 31.0 KiB | 00m00s Copr repository 100% | 80.9 KiB/s | 1.5 KiB | 00m00s updates 100% | 103.8 KiB/s | 28.1 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: python3-pip noarch 24.3.1-1.fc41 copr_base 11.4 MiB python3-wheel noarch 1:0.44.0-2.fc41 copr_base 523.8 KiB Transaction Summary: Installing: 2 packages Package "hdf5-1.12.1-20.fc41.x86_64" is already installed. Package "latexmk-4.85-2.fc41.noarch" is already installed. Package "make-1:4.4.1-8.fc41.x86_64" is already installed. Package "pyproject-rpm-macros-1.16.0-1.fc41.noarch" is already installed. Package "python3-devel-3.13.0-1.fc41.x86_64" is already installed. Package "python3-sphinx-latex-1:7.3.7-4.fc41.noarch" is already installed. Package "python3-brian2-2.7.1-2.fc41.x86_64" is already installed. Package "python3-deap-1.4.1-7.fc41.x86_64" is already installed. Package "python3-matplotlib-3.9.1-2.fc41.x86_64" is already installed. Package "python3-packaging-24.2-2.fc41.noarch" is already installed. Package "python3-setuptools-74.1.3-4.fc41.noarch" is already installed. Package "python3-sphinx-1:7.3.7-4.fc41.noarch" is already installed. Total size of inbound packages is 3 MiB. Need to download 3 MiB. After this operation, 12 MiB extra will be used (install 12 MiB, remove 0 B). [1/2] python3-wheel-1:0.44.0-2.fc41.noa 100% | 9.4 MiB/s | 154.1 KiB | 00m00s [2/2] python3-pip-0:24.3.1-1.fc41.noarc 100% | 109.2 MiB/s | 2.5 MiB | 00m00s -------------------------------------------------------------------------------- [2/2] Total 100% | 110.9 MiB/s | 2.7 MiB | 00m00s Running transaction [1/4] Verify package files 100% | 181.0 B/s | 2.0 B | 00m00s [2/4] Prepare transaction 100% | 68.0 B/s | 2.0 B | 00m00s [3/4] Installing python3-wheel-1:0.44.0 100% | 88.4 MiB/s | 543.4 KiB | 00m00s [4/4] Installing python3-pip-0:24.3.1-1 100% | 134.3 MiB/s | 11.7 MiB | 00m00s Warning: skipped PGP checks for 2 packages from repository: copr_base Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1732665600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.iJsdsU + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd pypet-0.6.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir --output /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.44.0) running egg_info creating pypet.egg-info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt writing manifest file 'pypet.egg-info/SOURCES.txt' reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' running dist_info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pypet-0.6.1.dist-info' Handling tables from hook generated metadata: Requires-Dist (pypet) Requirement not satisfied: tables Handling pandas from hook generated metadata: Requires-Dist (pypet) Requirement not satisfied: pandas Handling numpy from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: numpy (installed: numpy 1.26.4) Handling scipy from hook generated metadata: Requires-Dist (pypet) Requirement not satisfied: scipy + cat /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-buildrequires + rm -rfv pypet-0.6.1.dist-info/ removed 'pypet-0.6.1.dist-info/top_level.txt' removed 'pypet-0.6.1.dist-info/METADATA' removed 'pypet-0.6.1.dist-info/LICENSE' removed directory 'pypet-0.6.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pypet-0.6.1-8.fc41.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 112.2 KiB/s | 31.0 KiB | 00m00s Copr repository 100% | 96.1 KiB/s | 1.5 KiB | 00m00s updates 100% | 105.4 KiB/s | 28.1 KiB | 00m00s Repositories loaded. Package "hdf5-1.12.1-20.fc41.x86_64" is already installed. Package "latexmk-4.85-2.fc41.noarch" is already installed. Package "make-1:4.4.1-8.fc41.x86_64" is already installed. Package "pyproject-rpm-macros-1.16.0-1.fc41.noarch" is already installed. Package "python3-devel-3.13.0-1.fc41.x86_64" is already installed. Package "python3-sphinx-latex-1:7.3.7-4.fc41.noarch" is already installed. Package "python3-brian2-2.7.1-2.fc41.x86_64" is already installed. Package "python3-deap-1.4.1-7.fc41.x86_64" is already installed. Package "python3-matplotlib-3.9.1-2.fc41.x86_64" is already installed. Package "python3-numpy-1:1.26.4-8.fc41.x86_64" is already installed. Package "python3-packaging-24.2-2.fc41.noarch" is already installed. Package "python3-pip-24.3.1-1.fc41.noarch" is already installed. Package "python3-setuptools-74.1.3-4.fc41.noarch" is already installed. Package "python3-sphinx-1:7.3.7-4.fc41.noarch" is already installed. Package "python3-wheel-1:0.44.0-2.fc41.noarch" is already installed. Package Arch Version Repository Size Installing: python3-pandas x86_64 2.2.1-7.fc41 fedora 42.0 MiB python3-scipy x86_64 1.14.1-1.fc41 copr_base 67.4 MiB python3-tables x86_64 3.10.1-2.fc41 copr_base 10.2 MiB Installing dependencies: blosc x86_64 1.21.6-1.fc41 fedora 126.3 KiB blosc2 x86_64 2.15.1-1.fc41 fedora 552.2 KiB lzo x86_64 2.10-13.fc41 fedora 166.9 KiB python3-Bottleneck x86_64 1.3.7-8.fc41 copr_base 635.3 KiB python3-blosc2 x86_64 2.5.1-5.fc41 fedora 1.0 MiB python3-cpuinfo noarch 9.0.0-10.fc41 copr_base 309.9 KiB python3-msgpack x86_64 1.1.0-1.fc41 copr_base 330.0 KiB python3-ndindex x86_64 1.7-13.fc41 fedora 2.9 MiB python3-numexpr x86_64 2.8.5-7.fc41 fedora 574.8 KiB python3-numpy-f2py x86_64 1:1.26.4-8.fc41 fedora 2.8 MiB python3-platformdirs noarch 4.2.2-3.fc41 copr_base 168.4 KiB python3-pooch noarch 1.8.2-3.fc41 fedora 625.5 KiB python3-pytz noarch 2024.2-1.fc41 copr_base 223.7 KiB python3-typing-extensions noarch 4.12.2-3.fc41 fedora 464.5 KiB snappy x86_64 1.2.1-2.fc41 fedora 71.1 KiB zlib-ng x86_64 2.1.7-3.fc41 fedora 153.4 KiB Transaction Summary: Installing: 19 packages Total size of inbound packages is 30 MiB. Need to download 30 MiB. After this operation, 131 MiB extra will be used (install 131 MiB, remove 0 B). [ 1/19] python3-pandas-0:2.2.1-7.fc41.x 100% | 155.3 MiB/s | 8.1 MiB | 00m00s [ 2/19] python3-numexpr-0:2.8.5-7.fc41. 100% | 54.6 MiB/s | 167.8 KiB | 00m00s [ 3/19] python3-numpy-f2py-1:1.26.4-8.f 100% | 133.4 MiB/s | 546.3 KiB | 00m00s [ 4/19] python3-scipy-0:1.14.1-1.fc41.x 100% | 216.0 MiB/s | 17.1 MiB | 00m00s [ 5/19] python3-pooch-0:1.8.2-3.fc41.no 100% | 7.1 MiB/s | 138.6 KiB | 00m00s [ 6/19] blosc-0:1.21.6-1.fc41.x86_64 100% | 19.2 MiB/s | 58.9 KiB | 00m00s [ 7/19] blosc2-0:2.15.1-1.fc41.x86_64 100% | 69.4 MiB/s | 213.2 KiB | 00m00s [ 8/19] lzo-0:2.10-13.fc41.x86_64 100% | 32.2 MiB/s | 66.0 KiB | 00m00s [ 9/19] snappy-0:1.2.1-2.fc41.x86_64 100% | 19.3 MiB/s | 39.6 KiB | 00m00s [10/19] zlib-ng-0:2.1.7-3.fc41.x86_64 100% | 41.3 MiB/s | 84.7 KiB | 00m00s [11/19] python3-blosc2-0:2.5.1-5.fc41.x 100% | 48.3 MiB/s | 346.4 KiB | 00m00s [12/19] python3-ndindex-0:1.7-13.fc41.x 100% | 186.6 MiB/s | 764.5 KiB | 00m00s [13/19] python3-typing-extensions-0:4.1 100% | 30.5 MiB/s | 93.8 KiB | 00m00s [14/19] python3-platformdirs-0:4.2.2-3. 100% | 20.3 MiB/s | 41.5 KiB | 00m00s [15/19] python3-Bottleneck-0:1.3.7-8.fc 100% | 80.8 MiB/s | 165.5 KiB | 00m00s [16/19] python3-pytz-0:2024.2-1.fc41.no 100% | 29.5 MiB/s | 60.4 KiB | 00m00s [17/19] python3-msgpack-0:1.1.0-1.fc41. 100% | 52.1 MiB/s | 106.7 KiB | 00m00s [18/19] python3-cpuinfo-0:9.0.0-10.fc41 100% | 2.1 MiB/s | 69.1 KiB | 00m00s [19/19] python3-tables-0:3.10.1-2.fc41. 100% | 10.8 MiB/s | 1.7 MiB | 00m00s -------------------------------------------------------------------------------- [19/19] Total 100% | 68.1 MiB/s | 29.7 MiB | 00m00s Running transaction [ 1/21] Verify package files 100% | 175.0 B/s | 19.0 B | 00m00s [ 2/21] Prepare transaction 100% | 256.0 B/s | 19.0 B | 00m00s [ 3/21] Installing python3-cpuinfo-0:9. 100% | 153.3 MiB/s | 313.9 KiB | 00m00s [ 4/21] Installing python3-numexpr-0:2. 100% | 189.8 MiB/s | 582.9 KiB | 00m00s [ 5/21] Installing python3-msgpack-0:1. 100% | 163.5 MiB/s | 334.9 KiB | 00m00s [ 6/21] Installing python3-pytz-0:2024. 100% | 223.7 MiB/s | 229.0 KiB | 00m00s [ 7/21] Installing python3-platformdirs 100% | 170.8 MiB/s | 174.9 KiB | 00m00s [ 8/21] Installing python3-pooch-0:1.8. 100% | 208.5 MiB/s | 640.5 KiB | 00m00s [ 9/21] Installing python3-typing-exten 100% | 228.0 MiB/s | 466.9 KiB | 00m00s [10/21] Installing python3-ndindex-0:1. 100% | 266.7 MiB/s | 2.9 MiB | 00m00s [11/21] Installing zlib-ng-0:2.1.7-3.fc 100% | 151.2 MiB/s | 154.8 KiB | 00m00s [12/21] Installing blosc2-0:2.15.1-1.fc 100% | 271.3 MiB/s | 555.6 KiB | 00m00s [13/21] Installing python3-blosc2-0:2.5 100% | 249.3 MiB/s | 1.0 MiB | 00m00s [14/21] Installing snappy-0:1.2.1-2.fc4 100% | 71.1 MiB/s | 72.8 KiB | 00m00s [15/21] Installing blosc-0:1.21.6-1.fc4 100% | 126.1 MiB/s | 129.1 KiB | 00m00s [16/21] Installing lzo-0:2.10-13.fc41.x 100% | 82.3 MiB/s | 168.5 KiB | 00m00s [17/21] Installing python3-numpy-f2py-1 100% | 177.2 MiB/s | 2.8 MiB | 00m00s [18/21] Installing python3-scipy-0:1.14 100% | 339.0 MiB/s | 67.8 MiB | 00m00s [19/21] Installing python3-Bottleneck-0 100% | 80.5 MiB/s | 659.8 KiB | 00m00s [20/21] Installing python3-pandas-0:2.2 100% | 348.8 MiB/s | 42.2 MiB | 00m00s [21/21] Installing python3-tables-0:3.1 100% | 158.5 MiB/s | 10.3 MiB | 00m00s Warning: skipped PGP checks for 7 packages from repository: copr_base Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1732665600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.baTdCf + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd pypet-0.6.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir --output /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.44.0) running egg_info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' running dist_info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pypet-0.6.1.dist-info' Handling tables from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: tables (installed: tables 3.10.1) Handling pandas from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: pandas (installed: pandas 2.2.1) Handling numpy from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: numpy (installed: numpy 1.26.4) Handling scipy from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: scipy (installed: scipy 1.14.1) + cat /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-buildrequires + rm -rfv pypet-0.6.1.dist-info/ removed 'pypet-0.6.1.dist-info/top_level.txt' removed 'pypet-0.6.1.dist-info/METADATA' removed 'pypet-0.6.1.dist-info/LICENSE' removed directory 'pypet-0.6.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-pypet-0.6.1-8.fc41.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: updates 100% | 102.0 KiB/s | 28.1 KiB | 00m00s fedora 100% | 116.8 KiB/s | 31.0 KiB | 00m00s Copr repository 100% | 128.1 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "hdf5-1.12.1-20.fc41.x86_64" is already installed. Package "latexmk-4.85-2.fc41.noarch" is already installed. Package "make-1:4.4.1-8.fc41.x86_64" is already installed. Package "pyproject-rpm-macros-1.16.0-1.fc41.noarch" is already installed. Package "python3-devel-3.13.0-1.fc41.x86_64" is already installed. Package "python3-sphinx-latex-1:7.3.7-4.fc41.noarch" is already installed. Package "python3-brian2-2.7.1-2.fc41.x86_64" is already installed. Package "python3-deap-1.4.1-7.fc41.x86_64" is already installed. Package "python3-matplotlib-3.9.1-2.fc41.x86_64" is already installed. Package "python3-numpy-1:1.26.4-8.fc41.x86_64" is already installed. Package "python3-packaging-24.2-2.fc41.noarch" is already installed. Package "python3-pandas-2.2.1-7.fc41.x86_64" is already installed. Package "python3-pip-24.3.1-1.fc41.noarch" is already installed. Package "python3-scipy-1.14.1-1.fc41.x86_64" is already installed. Package "python3-setuptools-74.1.3-4.fc41.noarch" is already installed. Package "python3-sphinx-1:7.3.7-4.fc41.noarch" is already installed. Package "python3-tables-3.10.1-2.fc41.x86_64" is already installed. Package "python3-wheel-1:0.44.0-2.fc41.noarch" is already installed. Nothing to do. Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1732665600 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.er9qUM + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd pypet-0.6.1 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + '[' -f setup.py ']' + echo 'python3dist(setuptools) >= 40.8' + echo 'python3dist(wheel)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir --output /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-buildrequires Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.44.0) running egg_info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' running dist_info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pypet-0.6.1.dist-info' Handling tables from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: tables (installed: tables 3.10.1) Handling pandas from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: pandas (installed: pandas 2.2.1) Handling numpy from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: numpy (installed: numpy 1.26.4) Handling scipy from hook generated metadata: Requires-Dist (pypet) Requirement satisfied: scipy (installed: scipy 1.14.1) + cat /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-buildrequires + rm -rfv pypet-0.6.1.dist-info/ removed 'pypet-0.6.1.dist-info/top_level.txt' removed 'pypet-0.6.1.dist-info/METADATA' removed 'pypet-0.6.1.dist-info/LICENSE' removed directory 'pypet-0.6.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.PaaL4K + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd pypet-0.6.1 + mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir Processing /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-yv258gde/pypet.egg-info writing /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-yv258gde/pypet.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-yv258gde/pypet.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-yv258gde/pypet.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-yv258gde/pypet.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-yv258gde/pypet.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-yv258gde/pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-yv258gde/pypet.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-modern-metadata-yv258gde/pypet-0.6.1.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: pypet Building wheel for pypet (pyproject.toml): started Running command Building wheel for pypet (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/pypet copying pypet/__init__.py -> build/lib/pypet copying pypet/_version.py -> build/lib/pypet copying pypet/annotations.py -> build/lib/pypet copying pypet/environment.py -> build/lib/pypet copying pypet/naturalnaming.py -> build/lib/pypet copying pypet/parameter.py -> build/lib/pypet copying pypet/pypetconstants.py -> build/lib/pypet copying pypet/pypetexceptions.py -> build/lib/pypet copying pypet/pypetlogging.py -> build/lib/pypet copying pypet/shareddata.py -> build/lib/pypet copying pypet/slots.py -> build/lib/pypet copying pypet/storageservice.py -> build/lib/pypet copying pypet/trajectory.py -> build/lib/pypet creating build/lib/pypet/brian2 copying pypet/brian2/__init__.py -> build/lib/pypet/brian2 copying pypet/brian2/network.py -> build/lib/pypet/brian2 copying pypet/brian2/parameter.py -> build/lib/pypet/brian2 creating build/lib/pypet/utils copying pypet/utils/__init__.py -> build/lib/pypet/utils copying pypet/utils/comparisons.py -> build/lib/pypet/utils copying pypet/utils/configparsing.py -> build/lib/pypet/utils copying pypet/utils/decorators.py -> build/lib/pypet/utils copying pypet/utils/dynamicimports.py -> build/lib/pypet/utils copying pypet/utils/explore.py -> build/lib/pypet/utils copying pypet/utils/gitintegration.py -> build/lib/pypet/utils copying pypet/utils/hdf5compression.py -> build/lib/pypet/utils copying pypet/utils/helpful_classes.py -> build/lib/pypet/utils copying pypet/utils/helpful_functions.py -> build/lib/pypet/utils copying pypet/utils/mpwrappers.py -> build/lib/pypet/utils copying pypet/utils/pypettest.py -> build/lib/pypet/utils copying pypet/utils/siginthandling.py -> build/lib/pypet/utils copying pypet/utils/storagefactory.py -> build/lib/pypet/utils copying pypet/utils/trajectory_utils.py -> build/lib/pypet/utils creating build/lib/pypet/tests copying pypet/tests/__init__.py -> build/lib/pypet/tests copying pypet/tests/_atworema.py -> build/lib/pypet/tests copying pypet/tests/all_examples.py -> build/lib/pypet/tests copying pypet/tests/all_multi_core_tests.py -> build/lib/pypet/tests copying pypet/tests/all_single_core_tests.py -> build/lib/pypet/tests copying pypet/tests/all_tests.py -> build/lib/pypet/tests copying pypet/tests/coverage_run.py -> build/lib/pypet/tests copying pypet/tests/scoop_run.py -> build/lib/pypet/tests copying pypet/tests/test_all_nose.py -> build/lib/pypet/tests creating build/lib/pypet/tests/unittests copying pypet/tests/unittests/__init__.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/annotations_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/configparse_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/link_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/module_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/mpwrappers_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/parameter_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/pypetlogging_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/shared_data_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/storage_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/trajectory_test.py -> build/lib/pypet/tests/unittests copying pypet/tests/unittests/utils_test.py -> build/lib/pypet/tests/unittests creating build/lib/pypet/tests/integration copying pypet/tests/integration/__init__.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/envSCOOPdebug.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/environment_multiproc_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/environment_scoop_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/environment_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/git_check.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/link_multiproc_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/link_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/logging_multiproc_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/logging_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/merge_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/pipeline_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/removal_and_continue_test.py -> build/lib/pypet/tests/integration copying pypet/tests/integration/shared_data_test.py -> build/lib/pypet/tests/integration creating build/lib/pypet/tests/profiling copying pypet/tests/profiling/__init__.py -> build/lib/pypet/tests/profiling copying pypet/tests/profiling/creating_run_table.py -> build/lib/pypet/tests/profiling copying pypet/tests/profiling/profiling.py -> build/lib/pypet/tests/profiling creating build/lib/pypet/tests/testutils copying pypet/tests/testutils/__init__.py -> build/lib/pypet/tests/testutils copying pypet/tests/testutils/data.py -> build/lib/pypet/tests/testutils copying pypet/tests/testutils/ioutils.py -> build/lib/pypet/tests/testutils creating build/lib/pypet/tests/unittests/brian2tests copying pypet/tests/unittests/brian2tests/__init__.py -> build/lib/pypet/tests/unittests/brian2tests copying pypet/tests/unittests/brian2tests/brian2_monitor_test.py -> build/lib/pypet/tests/unittests/brian2tests copying pypet/tests/unittests/brian2tests/brian2_parameter_test.py -> build/lib/pypet/tests/unittests/brian2tests copying pypet/tests/unittests/brian2tests/module_test.py -> build/lib/pypet/tests/unittests/brian2tests copying pypet/tests/unittests/brian2tests/run_a_brian2_network.py -> build/lib/pypet/tests/unittests/brian2tests creating build/lib/pypet/tests/integration/brian2tests copying pypet/tests/integration/brian2tests/__init__.py -> build/lib/pypet/tests/integration/brian2tests copying pypet/tests/integration/brian2tests/another_network_test.py -> build/lib/pypet/tests/integration/brian2tests copying pypet/tests/integration/brian2tests/hdf5_brian2_test.py -> build/lib/pypet/tests/integration/brian2tests copying pypet/tests/integration/brian2tests/network_test.py -> build/lib/pypet/tests/integration/brian2tests creating build/lib/pypet/logging copying pypet/logging/debug.ini -> build/lib/pypet/logging copying pypet/logging/default.ini -> build/lib/pypet/logging copying pypet/logging/env_config_test.ini -> build/lib/pypet/logging copying pypet/logging/test.ini -> build/lib/pypet/logging creating build/lib/pypet/tests/testdata copying pypet/tests/testdata/pypet_v0_1b_6.hdf5 -> build/lib/pypet/tests/testdata installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/pypet copying build/lib/pypet/__init__.py -> build/bdist.linux-x86_64/wheel/./pypet copying build/lib/pypet/_version.py -> build/bdist.linux-x86_64/wheel/./pypet copying build/lib/pypet/annotations.py -> build/bdist.linux-x86_64/wheel/./pypet copying build/lib/pypet/environment.py -> build/bdist.linux-x86_64/wheel/./pypet copying build/lib/pypet/naturalnaming.py -> build/bdist.linux-x86_64/wheel/./pypet copying build/lib/pypet/parameter.py -> build/bdist.linux-x86_64/wheel/./pypet copying build/lib/pypet/pypetconstants.py -> build/bdist.linux-x86_64/wheel/./pypet copying build/lib/pypet/pypetexceptions.py -> build/bdist.linux-x86_64/wheel/./pypet copying build/lib/pypet/pypetlogging.py -> build/bdist.linux-x86_64/wheel/./pypet copying build/lib/pypet/shareddata.py -> build/bdist.linux-x86_64/wheel/./pypet copying build/lib/pypet/slots.py -> build/bdist.linux-x86_64/wheel/./pypet copying build/lib/pypet/storageservice.py -> build/bdist.linux-x86_64/wheel/./pypet copying build/lib/pypet/trajectory.py -> build/bdist.linux-x86_64/wheel/./pypet creating build/bdist.linux-x86_64/wheel/pypet/brian2 copying build/lib/pypet/brian2/__init__.py -> build/bdist.linux-x86_64/wheel/./pypet/brian2 copying build/lib/pypet/brian2/network.py -> build/bdist.linux-x86_64/wheel/./pypet/brian2 copying build/lib/pypet/brian2/parameter.py -> build/bdist.linux-x86_64/wheel/./pypet/brian2 creating build/bdist.linux-x86_64/wheel/pypet/utils copying build/lib/pypet/utils/__init__.py -> build/bdist.linux-x86_64/wheel/./pypet/utils copying build/lib/pypet/utils/comparisons.py -> build/bdist.linux-x86_64/wheel/./pypet/utils copying build/lib/pypet/utils/configparsing.py -> build/bdist.linux-x86_64/wheel/./pypet/utils copying build/lib/pypet/utils/decorators.py -> build/bdist.linux-x86_64/wheel/./pypet/utils copying build/lib/pypet/utils/dynamicimports.py -> build/bdist.linux-x86_64/wheel/./pypet/utils copying build/lib/pypet/utils/explore.py -> build/bdist.linux-x86_64/wheel/./pypet/utils copying build/lib/pypet/utils/gitintegration.py -> build/bdist.linux-x86_64/wheel/./pypet/utils copying build/lib/pypet/utils/hdf5compression.py -> build/bdist.linux-x86_64/wheel/./pypet/utils copying build/lib/pypet/utils/helpful_classes.py -> build/bdist.linux-x86_64/wheel/./pypet/utils copying build/lib/pypet/utils/helpful_functions.py -> build/bdist.linux-x86_64/wheel/./pypet/utils copying build/lib/pypet/utils/mpwrappers.py -> build/bdist.linux-x86_64/wheel/./pypet/utils copying build/lib/pypet/utils/pypettest.py -> build/bdist.linux-x86_64/wheel/./pypet/utils copying build/lib/pypet/utils/siginthandling.py -> build/bdist.linux-x86_64/wheel/./pypet/utils copying build/lib/pypet/utils/storagefactory.py -> build/bdist.linux-x86_64/wheel/./pypet/utils copying build/lib/pypet/utils/trajectory_utils.py -> build/bdist.linux-x86_64/wheel/./pypet/utils creating build/bdist.linux-x86_64/wheel/pypet/tests copying build/lib/pypet/tests/__init__.py -> build/bdist.linux-x86_64/wheel/./pypet/tests copying build/lib/pypet/tests/_atworema.py -> build/bdist.linux-x86_64/wheel/./pypet/tests copying build/lib/pypet/tests/all_examples.py -> build/bdist.linux-x86_64/wheel/./pypet/tests copying build/lib/pypet/tests/all_multi_core_tests.py -> build/bdist.linux-x86_64/wheel/./pypet/tests copying build/lib/pypet/tests/all_single_core_tests.py -> build/bdist.linux-x86_64/wheel/./pypet/tests copying build/lib/pypet/tests/all_tests.py -> build/bdist.linux-x86_64/wheel/./pypet/tests copying build/lib/pypet/tests/coverage_run.py -> build/bdist.linux-x86_64/wheel/./pypet/tests copying build/lib/pypet/tests/scoop_run.py -> build/bdist.linux-x86_64/wheel/./pypet/tests copying build/lib/pypet/tests/test_all_nose.py -> build/bdist.linux-x86_64/wheel/./pypet/tests creating build/bdist.linux-x86_64/wheel/pypet/tests/unittests copying build/lib/pypet/tests/unittests/__init__.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests copying build/lib/pypet/tests/unittests/annotations_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests copying build/lib/pypet/tests/unittests/configparse_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests copying build/lib/pypet/tests/unittests/link_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests copying build/lib/pypet/tests/unittests/module_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests copying build/lib/pypet/tests/unittests/mpwrappers_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests copying build/lib/pypet/tests/unittests/parameter_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests copying build/lib/pypet/tests/unittests/pypetlogging_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests copying build/lib/pypet/tests/unittests/shared_data_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests copying build/lib/pypet/tests/unittests/storage_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests copying build/lib/pypet/tests/unittests/trajectory_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests copying build/lib/pypet/tests/unittests/utils_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests creating build/bdist.linux-x86_64/wheel/pypet/tests/unittests/brian2tests copying build/lib/pypet/tests/unittests/brian2tests/__init__.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests/brian2tests copying build/lib/pypet/tests/unittests/brian2tests/brian2_monitor_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests/brian2tests copying build/lib/pypet/tests/unittests/brian2tests/brian2_parameter_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests/brian2tests copying build/lib/pypet/tests/unittests/brian2tests/module_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests/brian2tests copying build/lib/pypet/tests/unittests/brian2tests/run_a_brian2_network.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/unittests/brian2tests creating build/bdist.linux-x86_64/wheel/pypet/tests/integration copying build/lib/pypet/tests/integration/__init__.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration copying build/lib/pypet/tests/integration/envSCOOPdebug.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration copying build/lib/pypet/tests/integration/environment_multiproc_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration copying build/lib/pypet/tests/integration/environment_scoop_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration copying build/lib/pypet/tests/integration/environment_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration copying build/lib/pypet/tests/integration/git_check.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration copying build/lib/pypet/tests/integration/link_multiproc_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration copying build/lib/pypet/tests/integration/link_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration copying build/lib/pypet/tests/integration/logging_multiproc_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration copying build/lib/pypet/tests/integration/logging_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration copying build/lib/pypet/tests/integration/merge_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration copying build/lib/pypet/tests/integration/pipeline_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration copying build/lib/pypet/tests/integration/removal_and_continue_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration copying build/lib/pypet/tests/integration/shared_data_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration creating build/bdist.linux-x86_64/wheel/pypet/tests/integration/brian2tests copying build/lib/pypet/tests/integration/brian2tests/__init__.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration/brian2tests copying build/lib/pypet/tests/integration/brian2tests/another_network_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration/brian2tests copying build/lib/pypet/tests/integration/brian2tests/hdf5_brian2_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration/brian2tests copying build/lib/pypet/tests/integration/brian2tests/network_test.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/integration/brian2tests creating build/bdist.linux-x86_64/wheel/pypet/tests/profiling copying build/lib/pypet/tests/profiling/__init__.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/profiling copying build/lib/pypet/tests/profiling/creating_run_table.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/profiling copying build/lib/pypet/tests/profiling/profiling.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/profiling creating build/bdist.linux-x86_64/wheel/pypet/tests/testutils copying build/lib/pypet/tests/testutils/__init__.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/testutils copying build/lib/pypet/tests/testutils/data.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/testutils copying build/lib/pypet/tests/testutils/ioutils.py -> build/bdist.linux-x86_64/wheel/./pypet/tests/testutils creating build/bdist.linux-x86_64/wheel/pypet/tests/testdata copying build/lib/pypet/tests/testdata/pypet_v0_1b_6.hdf5 -> build/bdist.linux-x86_64/wheel/./pypet/tests/testdata creating build/bdist.linux-x86_64/wheel/pypet/logging copying build/lib/pypet/logging/debug.ini -> build/bdist.linux-x86_64/wheel/./pypet/logging copying build/lib/pypet/logging/default.ini -> build/bdist.linux-x86_64/wheel/./pypet/logging copying build/lib/pypet/logging/env_config_test.ini -> build/bdist.linux-x86_64/wheel/./pypet/logging copying build/lib/pypet/logging/test.ini -> build/bdist.linux-x86_64/wheel/./pypet/logging running install_egg_info running egg_info writing pypet.egg-info/PKG-INFO writing dependency_links to pypet.egg-info/dependency_links.txt writing requirements to pypet.egg-info/requires.txt writing top-level names to pypet.egg-info/top_level.txt reading manifest file 'pypet.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'pypet.egg-info/SOURCES.txt' Copying pypet.egg-info to build/bdist.linux-x86_64/wheel/./pypet-0.6.1-py3.13.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/pypet-0.6.1.dist-info/WHEEL creating '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir/pip-wheel-d3l28wo_/.tmp-ruxi686a/pypet-0.6.1-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'pypet/__init__.py' adding 'pypet/_version.py' adding 'pypet/annotations.py' adding 'pypet/environment.py' adding 'pypet/naturalnaming.py' adding 'pypet/parameter.py' adding 'pypet/pypetconstants.py' adding 'pypet/pypetexceptions.py' adding 'pypet/pypetlogging.py' adding 'pypet/shareddata.py' adding 'pypet/slots.py' adding 'pypet/storageservice.py' adding 'pypet/trajectory.py' adding 'pypet/brian2/__init__.py' adding 'pypet/brian2/network.py' adding 'pypet/brian2/parameter.py' adding 'pypet/logging/debug.ini' adding 'pypet/logging/default.ini' adding 'pypet/logging/env_config_test.ini' adding 'pypet/logging/test.ini' adding 'pypet/tests/__init__.py' adding 'pypet/tests/_atworema.py' adding 'pypet/tests/all_examples.py' adding 'pypet/tests/all_multi_core_tests.py' adding 'pypet/tests/all_single_core_tests.py' adding 'pypet/tests/all_tests.py' adding 'pypet/tests/coverage_run.py' adding 'pypet/tests/scoop_run.py' adding 'pypet/tests/test_all_nose.py' adding 'pypet/tests/integration/__init__.py' adding 'pypet/tests/integration/envSCOOPdebug.py' adding 'pypet/tests/integration/environment_multiproc_test.py' adding 'pypet/tests/integration/environment_scoop_test.py' adding 'pypet/tests/integration/environment_test.py' adding 'pypet/tests/integration/git_check.py' adding 'pypet/tests/integration/link_multiproc_test.py' adding 'pypet/tests/integration/link_test.py' adding 'pypet/tests/integration/logging_multiproc_test.py' adding 'pypet/tests/integration/logging_test.py' adding 'pypet/tests/integration/merge_test.py' adding 'pypet/tests/integration/pipeline_test.py' adding 'pypet/tests/integration/removal_and_continue_test.py' adding 'pypet/tests/integration/shared_data_test.py' adding 'pypet/tests/integration/brian2tests/__init__.py' adding 'pypet/tests/integration/brian2tests/another_network_test.py' adding 'pypet/tests/integration/brian2tests/hdf5_brian2_test.py' adding 'pypet/tests/integration/brian2tests/network_test.py' adding 'pypet/tests/profiling/__init__.py' adding 'pypet/tests/profiling/creating_run_table.py' adding 'pypet/tests/profiling/profiling.py' adding 'pypet/tests/testdata/pypet_v0_1b_6.hdf5' adding 'pypet/tests/testutils/__init__.py' adding 'pypet/tests/testutils/data.py' adding 'pypet/tests/testutils/ioutils.py' adding 'pypet/tests/unittests/__init__.py' adding 'pypet/tests/unittests/annotations_test.py' adding 'pypet/tests/unittests/configparse_test.py' adding 'pypet/tests/unittests/link_test.py' adding 'pypet/tests/unittests/module_test.py' adding 'pypet/tests/unittests/mpwrappers_test.py' adding 'pypet/tests/unittests/parameter_test.py' adding 'pypet/tests/unittests/pypetlogging_test.py' adding 'pypet/tests/unittests/shared_data_test.py' adding 'pypet/tests/unittests/storage_test.py' adding 'pypet/tests/unittests/trajectory_test.py' adding 'pypet/tests/unittests/utils_test.py' adding 'pypet/tests/unittests/brian2tests/__init__.py' adding 'pypet/tests/unittests/brian2tests/brian2_monitor_test.py' adding 'pypet/tests/unittests/brian2tests/brian2_parameter_test.py' adding 'pypet/tests/unittests/brian2tests/module_test.py' adding 'pypet/tests/unittests/brian2tests/run_a_brian2_network.py' adding 'pypet/utils/__init__.py' adding 'pypet/utils/comparisons.py' adding 'pypet/utils/configparsing.py' adding 'pypet/utils/decorators.py' adding 'pypet/utils/dynamicimports.py' adding 'pypet/utils/explore.py' adding 'pypet/utils/gitintegration.py' adding 'pypet/utils/hdf5compression.py' adding 'pypet/utils/helpful_classes.py' adding 'pypet/utils/helpful_functions.py' adding 'pypet/utils/mpwrappers.py' adding 'pypet/utils/pypettest.py' adding 'pypet/utils/siginthandling.py' adding 'pypet/utils/storagefactory.py' adding 'pypet/utils/trajectory_utils.py' adding 'pypet-0.6.1.dist-info/LICENSE' adding 'pypet-0.6.1.dist-info/METADATA' adding 'pypet-0.6.1.dist-info/WHEEL' adding 'pypet-0.6.1.dist-info/top_level.txt' adding 'pypet-0.6.1.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Building wheel for pypet (pyproject.toml): finished with status 'done' Created wheel for pypet: filename=pypet-0.6.1-py3-none-any.whl size=344992 sha256=1ce2db41df727b2333995267a6ae0459798e43a1177dcde103e73b38f085490e Stored in directory: /builddir/.cache/pip/wheels/86/b8/dd/a40118f5ac504c34af376e0fe5f13bf297c2bead9c1ed6d6bc Successfully built pypet + PYTHONPATH=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1 + /usr/bin/make -O -j4 V=1 VERBOSE=1 -C doc latex SPHINXOPTS=-j4 make: Entering directory '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/doc' sphinx-build -b latex -d build/doctrees -j4 source build/latex Running Sphinx v7.3.7 making output directory... done [autosummary] generating autosummary for: cookbook/brian.rst, cookbook/environment.rst, cookbook/parameter.rst, cookbook/trajectory.rst, examplesdoc/example_01.rst, examplesdoc/example_02.rst, examplesdoc/example_03.rst, examplesdoc/example_04.rst, examplesdoc/example_05.rst, examplesdoc/example_06.rst, ..., pypetdoc/brian2networkdoc.rst, pypetdoc/brian2parameterdoc.rst, pypetdoc/environmentdoc.rst, pypetdoc/parameterdoc.rst, pypetdoc/pypetconstantsdoc.rst, pypetdoc/pypetexceptionsdoc.rst, pypetdoc/slotsloggingdoc.rst, pypetdoc/storageservicedoc.rst, pypetdoc/trajectorydoc.rst, pypetdoc/utilsdoc.rst building [mo]: targets for 0 po files that are out of date writing output... building [latex]: all documents updating environment: [new config] 51 added, 0 changed, 0 removed reading sources... [ 20%] cookbook/brian .. examplesdoc/example_08 reading sources... [ 40%] examplesdoc/example_09 .. examplesdoc/example_20 reading sources... [ 60%] examplesdoc/example_21 .. manual/examples_toc reading sources... [ 80%] manual/faqs .. pypetdoc/environmentdoc reading sources... [100%] pypetdoc/parameterdoc .. pypetdoc/utilsdoc looking for now-outdated files... none found pickling environment... done checking consistency... done copying TeX support files... processing pypet.tex... latex manual/manual_toc manual/introduction manual/tutorial manual/cookbook_toc cookbook/trajectory cookbook/parameter cookbook/environment cookbook/brian manual/examples_toc examplesdoc/example_01 examplesdoc/example_02 examplesdoc/example_14 examplesdoc/example_15 examplesdoc/example_04 examplesdoc/example_21 examplesdoc/example_09 examplesdoc/example_13 examplesdoc/example_17 examplesdoc/example_18 examplesdoc/example_03 examplesdoc/example_05 examplesdoc/example_06 examplesdoc/example_08 examplesdoc/example_10 examplesdoc/example_12 examplesdoc/example_16 examplesdoc/example_19 examplesdoc/example_20 examplesdoc/example_22 examplesdoc/example_23 examplesdoc/example_24 manual/optimization_tips manual/faqs manual/misc_toc manual/misc manual/changelog manual/code_toc pypetdoc/environmentdoc pypetdoc/trajectorydoc pypetdoc/parameterdoc pypetdoc/annotationsdoc pypetdoc/utilsdoc pypetdoc/pypetexceptionsdoc pypetdoc/pypetconstantsdoc pypetdoc/slotsloggingdoc pypetdoc/storageservicedoc pypetdoc/brian2parameterdoc pypetdoc/brian2networkdoc latex_contact_license resolving references... done writing... done copying images... [ 12%] figures/layout.png copying images... [ 25%] figures/example_01.png copying images... [ 38%] figures/experiment_phases.png copying images... [ 50%] figures/tutorial.png copying images... [ 62%] figures/network_managing.png copying images... [ 75%] figures/main_script.png copying images... [ 88%] figures/network_run.png copying images... [100%] bbd_2013_poster/meyer_bbd_2013_small.png build succeeded, 2 warnings. The LaTeX files are in build/latex. Run 'make' in that directory to run these through (pdf)latex (use `make latexpdf' here to do that automatically). Build finished; the LaTeX files are in build/latex. Run `make' in that directory to run these through (pdf)latex (use `make latexpdf' here to do that automatically). make: Leaving directory '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/doc' WARNING: html_static_path entry '_static' does not exist /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/doc/source/latex.rst: WARNING: document isn't included in any toctree + /usr/bin/make -O -j4 V=1 VERBOSE=1 -C doc/build/latex LATEXMKOPTS=-quiet make: Entering directory '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/doc/build/latex' latexmk -pdf -dvi- -ps- -quiet 'pypet.tex' Rc files read: /etc/latexmkrc latexmkrc Latexmk: Run number 1 of rule 'pdflatex' This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode Latexmk: Getting log file 'pypet.log' Have index file 'pypet.idx', pypet.ind pypet Latexmk: Run number 1 of rule 'makeindex pypet.idx' Latexmk: Run number 2 of rule 'pdflatex' This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode Latexmk: Getting log file 'pypet.log' Have index file 'pypet.idx', pypet.ind pypet Latexmk: Run number 3 of rule 'pdflatex' This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode Latexmk: Getting log file 'pypet.log' Have index file 'pypet.idx', pypet.ind pypet make: Leaving directory '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/doc/build/latex' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.CZpx7K + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + '[' /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT ++ dirname /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT + mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build + mkdir /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd pypet-0.6.1 ++ ls /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir/pypet-0.6.1-py3-none-any.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=pypet==0.6.1 + '[' -z pypet==0.6.1 ']' + TMPDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir pypet==0.6.1 Using pip 24.3.1 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pyproject-wheeldir Processing ./pyproject-wheeldir/pypet-0.6.1-py3-none-any.whl Installing collected packages: pypet Successfully installed pypet-0.6.1 + '[' -d /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/bin ']' + rm -f /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + site_dirs+=("/usr/lib/python3.13/site-packages") + '[' /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.13/site-packages/pypet-0.6.1.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet-0.6.1.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT --record /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet-0.6.1.dist-info/RECORD --output /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-record + rm -fv /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet-0.6.1.dist-info/RECORD removed '/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet-0.6.1.dist-info/RECORD' + rm -fv /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet-0.6.1.dist-info/REQUESTED removed '/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet-0.6.1.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-files --output-modules /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-modules --buildroot /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-record --prefix /usr -l pypet + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/brian2/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/brian2/__pycache__/network.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/brian2/__pycache__/parameter.cpython-313.pyc: rewriting with normalized contents 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/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/utils/__pycache__/helpful_functions.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/utils/__pycache__/storagefactory.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/utils/__pycache__/trajectory_utils.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/_version.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/annotations.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/utils/__pycache__/mpwrappers.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/environment.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/utils/__pycache__/decorators.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/pypetexceptions.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/naturalnaming.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/pypetlogging.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/parameter.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/slots.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/shareddata.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/pypetconstants.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/trajectory.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/__pycache__/storageservice.cpython-313.pyc: rewriting with normalized contents Scanned 28 directories and 253 files, processed 86 inodes, 86 modified (10 replaced + 76 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/python-pypet-0.6.1-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.Mm73na + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd pypet-0.6.1 + '[' '!' -f /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-modules ']' + PATH=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages + _PYTHONSITE=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + /usr/bin/python3 -sP /usr/lib/rpm/redhat/import_all_modules.py -f /builddir/build/BUILD/python-pypet-0.6.1-build/python-pypet-0.6.1-8.fc41.x86_64-pyproject-modules -e '*tests*' Check import: pypet Check import: pypet.annotations Check import: pypet.brian2 Check import: pypet.brian2.network Check import: pypet.brian2.parameter Check import: pypet.environment Check import: pypet.naturalnaming Check import: pypet.parameter Check import: pypet.pypetconstants Check import: pypet.pypetexceptions Check import: pypet.pypetlogging Check import: pypet.shareddata Check import: pypet.slots Check import: pypet.storageservice Check import: pypet.trajectory Check import: pypet.utils Check import: pypet.utils.comparisons Check import: pypet.utils.configparsing Check import: pypet.utils.decorators Check import: pypet.utils.dynamicimports Check import: pypet.utils.explore Check import: pypet.utils.gitintegration Check import: pypet.utils.hdf5compression Check import: pypet.utils.helpful_classes Check import: pypet.utils.helpful_functions Check import: pypet.utils.mpwrappers Check import: pypet.utils.pypettest Check import: pypet.utils.siginthandling Check import: pypet.utils.storagefactory Check import: pypet.utils.trajectory_utils + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/python3 pypet/tests/all_tests.py test_annotations_insert (unittests.annotations_test.AnnotationsTest.test_annotations_insert) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_attribute_deletion (unittests.annotations_test.AnnotationsTest.test_attribute_deletion) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_f_get_errors (unittests.annotations_test.AnnotationsTest.test_f_get_errors) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.ggg` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_f_set_numbering (unittests.annotations_test.AnnotationsTest.test_f_set_numbering) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_get_annotations (unittests.annotations_test.AnnotationsTest.test_get_annotations) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_get_item (unittests.annotations_test.AnnotationsTest.test_get_item) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_get_item_no_copy (unittests.annotations_test.AnnotationsTest.test_get_item_no_copy) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_item_deletion (unittests.annotations_test.AnnotationsTest.test_item_deletion) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_pickling (unittests.annotations_test.AnnotationsTest.test_pickling) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_single_get_and_getattr_and_setattr (unittests.annotations_test.AnnotationsTest.test_single_get_and_getattr_and_setattr) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.test2` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_storage_and_loading (unittests.annotations_test.AnnotationsTest.test_storage_and_loading) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. DEBUG:pypet.storageservice.HDF5StorageService:Opening HDF5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5` in mode `a` with trajectory `Annotations` INFO:pypet.storageservice.HDF5StorageService:Start storing Trajectory `Annotations`. INFO:pypet.storageservice.HDF5StorageService:Storing branch `config`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.pandas_format`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.shuffle`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.fletcher32`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.encoding`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.complib`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.complevel`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.derived_parameters_per_run`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.results_per_run`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.purge_duplicate_comments`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.overview.results_summary`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.overview.derived_parameters_summary`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.overview.explored_parameters_overview`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.overview.results_overview`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.overview.derived_parameters_overview`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.overview.parameters_overview`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `config.hdf5.overview.config_overview`. INFO:pypet.storageservice.HDF5StorageService:Storing branch `results`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `results.testres`. INFO:pypet.storageservice.HDF5StorageService:Storing branch `parameters`. DEBUG:pypet.storageservice.HDF5StorageService:Storing `parameters.testgroup.testparam`. INFO:pypet.storageservice.HDF5StorageService:Finished storing Trajectory `Annotations`. DEBUG:pypet.storageservice.HDF5StorageService:Closing HDF5 file DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.storageservice.HDF5StorageService:Opening HDF5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5` in mode `r` with trajectory `Annotations` INFO:pypet.storageservice.HDF5StorageService:Loading trajectory `Annotations`. INFO:pypet.storageservice.HDF5StorageService:Loading branch `config` in mode `2`. INFO:pypet.storageservice.HDF5StorageService:Loading branch `parameters` in mode `2`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. DEBUG:pypet.storageservice.HDF5StorageService:Loading data of parameters.testgroup.testparam INFO:pypet.storageservice.HDF5StorageService:Loading branch `results` in mode `2`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.storageservice.HDF5StorageService:Loading data of results.testres DEBUG:pypet.storageservice.HDF5StorageService:Closing HDF5 file Level 21:root:REMOVING ALL TEMPORARY DATA ok test_to_str (unittests.annotations_test.AnnotationsTest.test_to_str) ... DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$', 'crun')`. DEBUG:pypet.trajectory.Trajectory:Added wildcard function `('$set', 'crunset')`. INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `/tmp/tmp_pypet_tests/experiments/tests/HDF5/annotations.hdf5`. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.config_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.explored_parameters_overview` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.derived_parameters_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.overview.results_summary` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.purge_duplicate_comments` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.results_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.derived_parameters_per_run` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complevel` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.complib` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.encoding` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.fletcher32` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.shuffle` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `config.hdf5.pandas_format` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `results.testres` to trajectory. DEBUG:pypet.naturalnaming.NaturalNamingInterface:Added `parameters.testgroup.testparam` to trajectory. Level 21:root:REMOVING ALL TEMPORARY DATA ok test_cannot_expand_and_not_explore_throwing_type_error (unittests.parameter_test.ArrayParameterTest.test_cannot_expand_and_not_explore_throwing_type_error) ... ok test_equal_values (unittests.parameter_test.ArrayParameterTest.test_equal_values) ... ok test_expanding (unittests.parameter_test.ArrayParameterTest.test_expanding) ... ok test_expanding_type_error (unittests.parameter_test.ArrayParameterTest.test_expanding_type_error) ... ok test_exploration (unittests.parameter_test.ArrayParameterTest.test_exploration) ... ok test_get_data (unittests.parameter_test.ArrayParameterTest.test_get_data) ... ok test_get_item (unittests.parameter_test.ArrayParameterTest.test_get_item) ... ok test_meta_settings (unittests.parameter_test.ArrayParameterTest.test_meta_settings) ... ok test_param_accepts_not_unsupported_data (unittests.parameter_test.ArrayParameterTest.test_param_accepts_not_unsupported_data) ... ok test_parameter_access_throws_ValueError (unittests.parameter_test.ArrayParameterTest.test_parameter_access_throws_ValueError) ... ok test_parameter_locking (unittests.parameter_test.ArrayParameterTest.test_parameter_locking) ... ok test_pickling_with_mocking_multiprocessing (unittests.parameter_test.ArrayParameterTest.test_pickling_with_mocking_multiprocessing) ... ok test_pickling_without_multiprocessing (unittests.parameter_test.ArrayParameterTest.test_pickling_without_multiprocessing) ... ok test_rename (unittests.parameter_test.ArrayParameterTest.test_rename) ... ok test_resizing_and_deletion (unittests.parameter_test.ArrayParameterTest.test_resizing_and_deletion) ... ok test_storage_and_loading (unittests.parameter_test.ArrayParameterTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.parameter_test.ArrayParameterTest.test_store_load_with_hdf5) ... ok test_store_load_with_hdf5_no_data (unittests.parameter_test.ArrayParameterTest.test_store_load_with_hdf5_no_data) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.parameter_test.ArrayParameterTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_type_error_for_exploring_if_range_does_not_match (unittests.parameter_test.ArrayParameterTest.test_type_error_for_exploring_if_range_does_not_match) ... ok test_type_error_for_get_item (unittests.parameter_test.ArrayParameterTest.test_type_error_for_get_item) ... ok test_type_error_for_not_supported_data (unittests.parameter_test.ArrayParameterTest.test_type_error_for_not_supported_data) ... ok test_type_error_for_shrink (unittests.parameter_test.ArrayParameterTest.test_type_error_for_shrink) ... ok test_values_of_same_type (unittests.parameter_test.ArrayParameterTest.test_values_of_same_type) ... ok test_with_pre_run (integration.brian2tests.network_test.Brain2NetworkTest.test_with_pre_run) ... SCOOP NOT running! SCOOP NOT running! SCOOP NOT running! SCOOP NOT running! SCOOP NOT running! SCOOP NOT running! Starting simulation at t=0. s for a duration of 100. ms 100. ms (100%) simulated in < 1s Starting simulation at t=100. ms for a duration of 300. ms Starting simulation at t=100. ms for a duration of 300. ms 300. ms (100%) simulated in < 1s 300. ms (100%) simulated in < 1s ok test_with_pre_run_single_core (integration.brian2tests.network_test.Brain2NetworkTest.test_with_pre_run_single_core) ... Starting simulation at t=0. s for a duration of 100. ms 100. ms (100%) simulated in < 1s Starting simulation at t=100. ms for a duration of 300. ms 300. ms (100%) simulated in < 1s Starting simulation at t=100. ms for a duration of 300. ms 300. ms (100%) simulated in < 1s ok test_without_pre_run (integration.brian2tests.network_test.Brain2NetworkTest.test_without_pre_run) ... Starting simulation at t=0. s for a duration of 300. ms Starting simulation at t=0. s for a duration of 300. ms 300. ms (100%) simulated in < 1s 300. ms (100%) simulated in < 1s ok test_net (integration.brian2tests.another_network_test.Brian2FullNetworkTest.test_net) ... Starting simulation at t=0. s for a duration of 250. ms 250. ms (100%) simulated in < 1s Starting simulation at t=0. s for a duration of 250. ms 250. ms (100%) simulated in < 1s Starting simulation at t=0. s for a duration of 250. ms 250. ms (100%) simulated in < 1s ok test_get_unit_fast (unittests.brian2tests.brian2_parameter_test.Brian2GetUnitFastTest.test_get_unit_fast) ... ok Starting simulation at t=0. s for a duration of 10. ms 10. ms (100%) simulated in < 1s test_Attribute_error_for_get_item (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_Attribute_error_for_get_item) ... ok test_contains (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_contains) ... ok test_deletion (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_deletion) ... ok test_deletion_throws_error_if_item_not_there (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_deletion_throws_error_if_item_not_there) ... ok test_dir (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_dir) ... ok test_emptying (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_emptying) ... ok test_f_get_errors (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_f_get_errors) ... ok test_f_get_many_items (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_f_get_many_items) ... ok test_f_to_dict_no_copy (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_f_to_dict_no_copy) ... ok test_failing_adding_another_monitor (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_failing_adding_another_monitor) ... ok test_get_data (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_get_data) ... ok test_get_item (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_get_item) ... ok test_getattr_and_setattr (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_getattr_and_setattr) ... ok test_iter (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_iter) ... ok test_meta_settings (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_meta_settings) ... ok test_natural_naming (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_natural_naming) ... ok test_pickling (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_pickling) ... ok test_reject_outer_data_structure (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_reject_outer_data_structure) ... ok test_rename (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_rename) ... ok test_set_item_via_number (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_set_item_via_number) ... ok test_set_numbering (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_set_numbering) ... ok test_storage_and_loading (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_store_load_with_hdf5) ... ok test_string_representation (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_string_representation) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_warning (unittests.brian2tests.brian2_monitor_test.Brian2MonitorTest.test_warning) ... ok test_expanding (unittests.brian2tests.brian2_parameter_test.Brian2ParameterDuplicatesInStoreTest.test_expanding) ... ok test_exploration (unittests.brian2tests.brian2_parameter_test.Brian2ParameterDuplicatesInStoreTest.test_exploration) ... ok test_loading_and_expanding (unittests.brian2tests.brian2_parameter_test.Brian2ParameterDuplicatesInStoreTest.test_loading_and_expanding) ... ok test_meta_settings (unittests.brian2tests.brian2_parameter_test.Brian2ParameterDuplicatesInStoreTest.test_meta_settings) ... ok test_storage_and_loading (unittests.brian2tests.brian2_parameter_test.Brian2ParameterDuplicatesInStoreTest.test_storage_and_loading) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.brian2tests.brian2_parameter_test.Brian2ParameterDuplicatesInStoreTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_cannot_expand_and_not_explore_throwing_type_error (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_cannot_expand_and_not_explore_throwing_type_error) ... ok test_equal_values (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_equal_values) ... ok test_expanding (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_expanding) ... ok test_expanding_type_error (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_expanding_type_error) ... ok test_exploration (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_exploration) ... ok test_false_on_values_not_of_same_type (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_false_on_values_not_of_same_type) ... ok test_get_data (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_get_data) ... ok test_get_item (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_get_item) ... ok test_meta_settings (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_meta_settings) ... ok test_param_accepts_not_unsupported_data (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_param_accepts_not_unsupported_data) ... ok test_parameter_access_throws_ValueError (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_parameter_access_throws_ValueError) ... ok test_parameter_locking (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_parameter_locking) ... ok test_pickling_with_mocking_multiprocessing (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_pickling_with_mocking_multiprocessing) ... ok test_pickling_without_multiprocessing (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_pickling_without_multiprocessing) ... ok test_rename (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_rename) ... ok test_resizing_and_deletion (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_resizing_and_deletion) ... ok test_storage_and_loading (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_store_load_with_hdf5) ... ok test_store_load_with_hdf5_no_data (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_store_load_with_hdf5_no_data) ... ok test_supports (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_supports) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_type_error_for_exploring_if_range_does_not_match (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_type_error_for_exploring_if_range_does_not_match) ... ok test_type_error_for_get_item (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_type_error_for_get_item) ... ok test_type_error_for_not_supported_data (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_type_error_for_not_supported_data) ... ok test_type_error_for_shrink (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_type_error_for_shrink) ... ok test_values_of_same_type (unittests.brian2tests.brian2_parameter_test.Brian2ParameterTest.test_values_of_same_type) ... ok test_Attribute_error_for_get_item (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_Attribute_error_for_get_item) ... ok test_contains (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_contains) ... ok test_deletion (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_deletion) ... ok test_deletion_throws_error_if_item_not_there (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_deletion_throws_error_if_item_not_there) ... ok test_dir (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_dir) ... ok test_emptying (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_emptying) ... ok test_f_get_errors (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_f_get_errors) ... ok test_f_get_many_items (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_f_get_many_items) ... ok test_f_to_dict_no_copy (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_f_to_dict_no_copy) ... ok test_get_data (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_get_data) ... ok test_get_item (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_get_item) ... ok test_getattr_and_setattr (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_getattr_and_setattr) ... ok test_illegal_naming (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_illegal_naming) ... ok test_iter (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_iter) ... ok test_meta_settings (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_meta_settings) ... ok test_natural_naming (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_natural_naming) ... ok test_pickling (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_pickling) ... ok test_reject_outer_data_structure (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_reject_outer_data_structure) ... ok test_rename (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_rename) ... ok test_set_item_via_number (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_set_item_via_number) ... ok test_set_numbering (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_set_numbering) ... ok test_storage_and_loading (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_store_load_with_hdf5) ... ok test_string_representation (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_string_representation) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_warning (unittests.brian2tests.brian2_parameter_test.Brian2ResultTest.test_warning) ... ok test_hdf5_store_load_monitorresult (integration.brian2tests.hdf5_brian2_test.Brian2hdf5Test.test_hdf5_store_load_monitorresult) ... ok test_hdf5_store_load_parameter (integration.brian2tests.hdf5_brian2_test.Brian2hdf5Test.test_hdf5_store_load_parameter) ... ok test_hdf5_store_load_result (integration.brian2tests.hdf5_brian2_test.Brian2hdf5Test.test_hdf5_store_load_result) ... ok test_NOT_purge_duplicate_comments (integration.environment_multiproc_test.CapTest.test_NOT_purge_duplicate_comments) ... skipped 'Only makes sense if psutil is installed' test_a_large_run (integration.environment_multiproc_test.CapTest.test_a_large_run) ... skipped 'Only makes sense if psutil is installed' test_errors (integration.environment_multiproc_test.CapTest.test_errors) ... skipped 'Only makes sense if psutil is installed' test_expand (integration.environment_multiproc_test.CapTest.test_expand) ... skipped 'Only makes sense if psutil is installed' test_expand_after_reload (integration.environment_multiproc_test.CapTest.test_expand_after_reload) ... skipped 'Only makes sense if psutil is installed' test_file_overwriting (integration.environment_multiproc_test.CapTest.test_file_overwriting) ... skipped 'Only makes sense if psutil is installed' test_just_one_run (integration.environment_multiproc_test.CapTest.test_just_one_run) ... skipped 'Only makes sense if psutil is installed' test_niceness (integration.environment_multiproc_test.CapTest.test_niceness) ... skipped 'Only makes sense if psutil is installed' test_purge_duplicate_comments (integration.environment_multiproc_test.CapTest.test_purge_duplicate_comments) ... skipped 'Only makes sense if psutil is installed' test_run (integration.environment_multiproc_test.CapTest.test_run) ... skipped 'Only makes sense if psutil is installed' test_run_complex (integration.environment_multiproc_test.CapTest.test_run_complex) ... skipped 'Only makes sense if psutil is installed' test_store_form_tuple (integration.environment_multiproc_test.CapTest.test_store_form_tuple) ... skipped 'Only makes sense if psutil is installed' test_store_single_group (integration.environment_multiproc_test.CapTest.test_store_single_group) ... skipped 'Only makes sense if psutil is installed' test_switch_ON_large_tables (integration.environment_multiproc_test.CapTest.test_switch_ON_large_tables) ... skipped 'Only makes sense if psutil is installed' test_switch_off_all_tables (integration.environment_multiproc_test.CapTest.test_switch_off_all_tables) ... skipped 'Only makes sense if psutil is installed' test_switch_on_all_comments (integration.environment_multiproc_test.CapTest.test_switch_on_all_comments) ... skipped 'Only makes sense if psutil is installed' test_time_display_of_loading (integration.environment_multiproc_test.CapTest.test_time_display_of_loading) ... skipped 'Only makes sense if psutil is installed' test_two_runs (integration.environment_multiproc_test.CapTest.test_two_runs) ... skipped 'Only makes sense if psutil is installed' test_cartesian_product (unittests.utils_test.CartesianTest.test_cartesian_product) ... ok test_cartesian_product_combined_params (unittests.utils_test.CartesianTest.test_cartesian_product_combined_params) ... ok test_parsing (unittests.configparse_test.ConfigParseTest.test_parsing) ... MainProcess STDOUT CRITICAL Established redirection of `stdout`. ok test_continueing (integration.removal_and_continue_test.ContinueMPPoolTest.test_continueing) ... skipped 'Only makes sense if dill is installed' test_continueing_mp (integration.removal_and_continue_test.ContinueMPPoolTest.test_continueing_mp) ... skipped 'Only makes sense if dill is installed' test_continueing_mp_custom (integration.removal_and_continue_test.ContinueMPPoolTest.test_continueing_mp_custom) ... skipped 'Only makes sense if dill is installed' test_continueing_remove_completed (integration.removal_and_continue_test.ContinueMPPoolTest.test_continueing_remove_completed) ... skipped 'Only makes sense if dill is installed' test_multiple_storage_and_loading (integration.removal_and_continue_test.ContinueMPPoolTest.test_multiple_storage_and_loading) ... skipped 'Only makes sense if dill is installed' test_removal (integration.removal_and_continue_test.ContinueMPPoolTest.test_removal) ... skipped 'Only makes sense if dill is installed' test_continueing (integration.removal_and_continue_test.ContinueMPTest.test_continueing) ... skipped 'Only makes sense if dill is installed' test_continueing_mp (integration.removal_and_continue_test.ContinueMPTest.test_continueing_mp) ... skipped 'Only makes sense if dill is installed' test_continueing_mp_custom (integration.removal_and_continue_test.ContinueMPTest.test_continueing_mp_custom) ... skipped 'Only makes sense if dill is installed' test_continueing_remove_completed (integration.removal_and_continue_test.ContinueMPTest.test_continueing_remove_completed) ... skipped 'Only makes sense if dill is installed' test_multiple_storage_and_loading (integration.removal_and_continue_test.ContinueMPTest.test_multiple_storage_and_loading) ... skipped 'Only makes sense if dill is installed' test_removal (integration.removal_and_continue_test.ContinueMPTest.test_removal) ... skipped 'Only makes sense if dill is installed' test_continueing (integration.removal_and_continue_test.ContinueTest.test_continueing) ... skipped 'Only makes sense if dill is installed' test_continueing_remove_completed (integration.removal_and_continue_test.ContinueTest.test_continueing_remove_completed) ... skipped 'Only makes sense if dill is installed' test_multiple_storage_and_loading (integration.removal_and_continue_test.ContinueTest.test_multiple_storage_and_loading) ... skipped 'Only makes sense if dill is installed' test_removal (integration.removal_and_continue_test.ContinueTest.test_removal) ... skipped 'Only makes sense if dill is installed' test_NOT_purge_duplicate_comments (pypet.tests.integration.environment_test.EnvironmentTest.test_NOT_purge_duplicate_comments) ... ok test_a_large_run (pypet.tests.integration.environment_test.EnvironmentTest.test_a_large_run) ... ok test_errors (pypet.tests.integration.environment_test.EnvironmentTest.test_errors) ... ok test_expand (pypet.tests.integration.environment_test.EnvironmentTest.test_expand) ... ok test_expand_after_reload (pypet.tests.integration.environment_test.EnvironmentTest.test_expand_after_reload) ... ok test_file_overwriting (pypet.tests.integration.environment_test.EnvironmentTest.test_file_overwriting) ... ok test_just_one_run (pypet.tests.integration.environment_test.EnvironmentTest.test_just_one_run) ... ok test_niceness (pypet.tests.integration.environment_test.EnvironmentTest.test_niceness) ... ok test_purge_duplicate_comments (pypet.tests.integration.environment_test.EnvironmentTest.test_purge_duplicate_comments) ... MainProcess 2024-11-27 15:40:41,861 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__87053_2024_11_27_15h40m41s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (pypet.tests.integration.environment_test.EnvironmentTest.test_run) ... ok test_run_complex (pypet.tests.integration.environment_test.EnvironmentTest.test_run_complex) ... ok test_store_form_tuple (pypet.tests.integration.environment_test.EnvironmentTest.test_store_form_tuple) ... ok test_store_single_group (pypet.tests.integration.environment_test.EnvironmentTest.test_store_single_group) ... MainProcess 2024-11-27 15:40:45,971 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (pypet.tests.integration.environment_test.EnvironmentTest.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (pypet.tests.integration.environment_test.EnvironmentTest.test_switch_off_all_tables) ... ok test_switch_on_all_comments (pypet.tests.integration.environment_test.EnvironmentTest.test_switch_on_all_comments) ... ok test_time_display_of_loading (pypet.tests.integration.environment_test.EnvironmentTest.test_time_display_of_loading) ... ok test_two_runs (pypet.tests.integration.environment_test.EnvironmentTest.test_two_runs) ... ok test_full_store (integration.environment_test.FullStorageTest.test_full_store) ... ok test_run (pypet.tests.integration.link_test.LinkEnvironmentTest.test_run) ... ok test_merge_with_linked_derived_parameter (integration.link_test.LinkMergeTest.test_merge_with_linked_derived_parameter) ... ok test_remerging (integration.link_test.LinkMergeTest.test_remerging) ... ok test_find_in_all_runs_with_links (unittests.link_test.LinkTrajectoryTests.test_find_in_all_runs_with_links) ... ok test_get_all_not_links (unittests.link_test.LinkTrajectoryTests.test_get_all_not_links) ... ok test_iteration_failure (unittests.link_test.LinkTrajectoryTests.test_iteration_failure) ... ok test_link_creation (unittests.link_test.LinkTrajectoryTests.test_link_creation) ... Failed adding `test` under `parameters`. Failed adding `circle1` under ``. ok test_link_deletion (unittests.link_test.LinkTrajectoryTests.test_link_deletion) ... ok test_link_of_link (unittests.link_test.LinkTrajectoryTests.test_link_of_link) ... ok test_link_removal (unittests.link_test.LinkTrajectoryTests.test_link_removal) ... ok test_links_according_to_run (unittests.link_test.LinkTrajectoryTests.test_links_according_to_run) ... ok test_not_getting_links (unittests.link_test.LinkTrajectoryTests.test_not_getting_links) ... ok test_storage_and_loading (unittests.link_test.LinkTrajectoryTests.test_storage_and_loading) ... ok test_pickling (unittests.pypetlogging_test.LoggingManagerTest.test_pickling) ... ok test_disable (pypet.tests.integration.logging_test.LoggingTest.test_disable) ... WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter ok test_file_renaming (pypet.tests.integration.logging_test.LoggingTest.test_file_renaming) ... ok test_logfile_creation_normal (pypet.tests.integration.logging_test.LoggingTest.test_logfile_creation_normal) ... ok test_logfile_creation_with_errors (pypet.tests.integration.logging_test.LoggingTest.test_logfile_creation_with_errors) ... MainProcess 2024-11-27 15:40:59,745 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:40:59,745 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:40:59,747 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:40:59,750 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:40:59,750 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:40:59,752 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:40:59,755 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:40:59,755 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:40:59,757 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:40:59,760 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:40:59,760 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:40:59,762 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:40:59,765 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:40:59,765 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:40:59,766 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:40:59,769 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:40:59,769 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:40:59,771 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:40:59,774 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:40:59,774 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:40:59,776 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ok test_logfile_old_way_creation_with_errors (pypet.tests.integration.logging_test.LoggingTest.test_logfile_old_way_creation_with_errors) ... MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ok test_logfile_old_way_disabling_mp_log (pypet.tests.integration.logging_test.LoggingTest.test_logfile_old_way_disabling_mp_log) ... MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.ERROR ERROR ERROR_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ok test_logging_show_progress (pypet.tests.integration.logging_test.LoggingTest.test_logging_show_progress) ... MainProcess 2024-11-27 15:41:00,362 progress ERROR PROGRESS: Finished 0/7 runs [ ] 0.0% MainProcess 2024-11-27 15:41:00,363 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:41:00,363 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:41:00,365 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:00,368 progress ERROR PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 MainProcess 2024-11-27 15:41:00,368 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:41:00,368 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:41:00,370 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:00,373 progress ERROR PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 MainProcess 2024-11-27 15:41:00,373 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:41:00,373 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:41:00,375 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:00,378 progress ERROR PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 MainProcess 2024-11-27 15:41:00,378 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:41:00,378 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:41:00,380 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:00,383 progress ERROR PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 MainProcess 2024-11-27 15:41:00,383 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:41:00,383 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:41:00,385 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:00,388 progress ERROR PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 MainProcess 2024-11-27 15:41:00,388 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:41:00,388 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:41:00,390 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:00,393 progress ERROR PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 MainProcess 2024-11-27 15:41:00,393 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:41:00,393 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:41:00,395 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:00,398 progress ERROR PROGRESS: Finished 7/7 runs [====================]100.0% ok test_logging_show_progress_print (pypet.tests.integration.logging_test.LoggingTest.test_logging_show_progress_print) ... MainProcess 2024-11-27 15:41:00,561 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2024-11-27 15:41:00,573 prostdout CRITICAL PROGRESS: Finished 0/7 runs [ ] 0.0% MainProcess 2024-11-27 15:41:00,574 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:41:00,574 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:41:00,576 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:00,578 prostdout CRITICAL PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 MainProcess 2024-11-27 15:41:00,579 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:41:00,579 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:41:00,581 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:00,584 prostdout CRITICAL PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 MainProcess 2024-11-27 15:41:00,584 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:41:00,584 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:41:00,585 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:00,588 prostdout CRITICAL PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 MainProcess 2024-11-27 15:41:00,589 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:41:00,589 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:41:00,590 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:00,593 prostdout CRITICAL PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 MainProcess 2024-11-27 15:41:00,593 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:41:00,593 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:41:00,595 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:00,598 prostdout CRITICAL PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 MainProcess 2024-11-27 15:41:00,598 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:41:00,598 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:41:00,600 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:00,603 prostdout CRITICAL PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 MainProcess 2024-11-27 15:41:00,603 pypet.ERROR ERROR ERROR_Test! MainProcess 2024-11-27 15:41:00,603 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:41:00,604 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:00,607 prostdout CRITICAL PROGRESS: Finished 7/7 runs [====================]100.0% ok test_logging_stdout (pypet.tests.integration.logging_test.LoggingTest.test_logging_stdout) ... MainProcess 2024-11-27 15:41:00,769 STDOUT CRITICAL Established redirection of `stdout`. MainProcess 2024-11-27 15:41:00,785 pypet.only.ERROR ERROR Test of Error Logging during run! MainProcess 2024-11-27 15:41:00,787 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:41:01,142 STDOUT CRITICAL sTdOuTLoGGinG ok test_throw_error_when_specifying_config_and_old_method (pypet.tests.integration.logging_test.LoggingTest.test_throw_error_when_specifying_config_and_old_method) ... ok test_init_method (unittests.utils_test.MatchingkwargsTest.test_init_method) ... ok test_kwargs (unittests.utils_test.MatchingkwargsTest.test_kwargs) ... ok test_more_than_def (unittests.utils_test.MatchingkwargsTest.test_more_than_def) ... ok test_more_than_def_args (unittests.utils_test.MatchingkwargsTest.test_more_than_def_args) ... ok test_no_match_no_init (unittests.utils_test.MatchingkwargsTest.test_no_match_no_init) ... ok test_basic_within_same_file_and_skipping_duplicates_which_leads_to_one_reamianing (integration.merge_test.MergeTest.test_basic_within_same_file_and_skipping_duplicates_which_leads_to_one_reamianing) ... ok test_basic_within_same_file_and_skipping_duplicates_which_will_be_all (integration.merge_test.MergeTest.test_basic_within_same_file_and_skipping_duplicates_which_will_be_all) ... ok test_basic_within_separate_file_and_skipping_duplicates_which_leads_to_one_reamianing (integration.merge_test.MergeTest.test_basic_within_separate_file_and_skipping_duplicates_which_leads_to_one_reamianing) ... ok test_merge_basic_with_separate_files_only_adding_more_trials (integration.merge_test.MergeTest.test_merge_basic_with_separate_files_only_adding_more_trials) ... ok test_merge_basic_with_separate_files_only_adding_more_trials_slow_merge (integration.merge_test.MergeTest.test_merge_basic_with_separate_files_only_adding_more_trials_slow_merge) ... ok test_merge_basic_within_same_file_only_adding_more_trials_copy_nodes (integration.merge_test.MergeTest.test_merge_basic_within_same_file_only_adding_more_trials_copy_nodes) ... ok test_merge_basic_within_same_file_only_adding_more_trials_copy_nodes_test_backup (integration.merge_test.MergeTest.test_merge_basic_within_same_file_only_adding_more_trials_copy_nodes_test_backup) ... ok test_merge_basic_within_same_file_only_adding_more_trials_delete_other_trajectory (integration.merge_test.MergeTest.test_merge_basic_within_same_file_only_adding_more_trials_delete_other_trajectory) ... ok test_merge_basic_within_same_file_only_adding_more_trials_move_nodes (integration.merge_test.MergeTest.test_merge_basic_within_same_file_only_adding_more_trials_move_nodes) ... ok test_merging_errors_if_trajs_do_not_match (integration.merge_test.MergeTest.test_merging_errors_if_trajs_do_not_match) ... ok test_merging_trajectories_in_different_subspace (integration.merge_test.MergeTest.test_merging_trajectories_in_different_subspace) ... ok test_NOT_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_NOT_purge_duplicate_comments) ... Disabled redirection of `stdout`. Disabled redirection of `stdout`. Disabled redirection of `stdout`. Disabled redirection of `stdout`. ok test_a_large_run (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_a_large_run) ... ok test_errors (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_errors) ... ok test_expand (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_expand_after_reload) ... ok test_file_overwriting (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_file_overwriting) ... ok test_just_one_run (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_just_one_run) ... ok test_niceness (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_niceness) ... ok test_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_purge_duplicate_comments) ... MainProcess 2024-11-27 15:42:17,175 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__62651_2024_11_27_15h42m17s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_run) ... ok test_run_complex (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_run_complex) ... ok test_store_form_tuple (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_store_form_tuple) ... ok test_store_single_group (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_store_single_group) ... MainProcess 2024-11-27 15:42:22,204 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_switch_off_all_tables) ... ok test_switch_on_all_comments (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_switch_on_all_comments) ... ok test_time_display_of_loading (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_time_display_of_loading) ... ok test_two_runs (integration.environment_multiproc_test.MultiprocFrozenPoolLocalTest.test_two_runs) ... ok test_NOT_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_NOT_purge_duplicate_comments) ... ok test_a_large_run (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_a_large_run) ... ok test_errors (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_errors) ... ok test_expand (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_expand_after_reload) ... ok test_file_overwriting (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_file_overwriting) ... ok test_just_one_run (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_just_one_run) ... ok test_niceness (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_niceness) ... ok test_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_purge_duplicate_comments) ... MainProcess 2024-11-27 15:42:42,431 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__3865_2024_11_27_15h42m42s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_run) ... ok test_run_complex (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_run_complex) ... ok test_store_form_tuple (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_store_form_tuple) ... ok test_store_single_group (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_store_single_group) ... MainProcess 2024-11-27 15:42:47,073 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_switch_off_all_tables) ... ok test_switch_on_all_comments (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_switch_on_all_comments) ... ok test_time_display_of_loading (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_time_display_of_loading) ... ok test_two_runs (integration.environment_multiproc_test.MultiprocFrozenPoolPipeTest.test_two_runs) ... ok test_NOT_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_NOT_purge_duplicate_comments) ... ok test_a_large_run (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_a_large_run) ... ok test_errors (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_errors) ... ok test_expand (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_expand_after_reload) ... ok test_file_overwriting (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_file_overwriting) ... ok test_just_one_run (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_just_one_run) ... ok test_niceness (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_niceness) ... ok test_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_purge_duplicate_comments) ... MainProcess 2024-11-27 15:43:09,005 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__55194_2024_11_27_15h43m08s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_run) ... ok test_run_complex (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_run_complex) ... ok test_store_form_tuple (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_store_form_tuple) ... ok test_store_single_group (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_store_single_group) ... MainProcess 2024-11-27 15:43:15,192 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_switch_off_all_tables) ... ok test_switch_on_all_comments (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_switch_on_all_comments) ... ok test_time_display_of_loading (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_time_display_of_loading) ... ok test_two_runs (integration.environment_multiproc_test.MultiprocFrozenPoolQueueTest.test_two_runs) ... ok test_expand (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2024-11-27 15:43:31,448 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__48686` did NOT complete: `run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocFrozenPoolSortLockTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2024-11-27 15:43:36,303 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__53605` did NOT complete: `run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocFrozenPoolSortPipeTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2024-11-27 15:43:41,286 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__32769` did NOT complete: `run_00000006, run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_full_copy_is_old_value (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_if_full_copy_is_old_value) ... ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocFrozenPoolSortQueueTest.test_if_results_are_sorted_correctly_using_map) ... ok test_NOT_purge_duplicate_comments (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_NOT_purge_duplicate_comments) ... skipped 'Only makes sense if scoop is installed' test_a_large_run (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_a_large_run) ... skipped 'Only makes sense if scoop is installed' test_errors (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_errors) ... skipped 'Only makes sense if scoop is installed' test_expand (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_expand) ... skipped 'Only makes sense if scoop is installed' test_expand_after_reload (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_expand_after_reload) ... skipped 'Only makes sense if scoop is installed' test_file_overwriting (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_file_overwriting) ... skipped 'Only makes sense if scoop is installed' test_just_one_run (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_just_one_run) ... skipped 'Only makes sense if scoop is installed' test_niceness (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_niceness) ... skipped 'Only makes sense if scoop is installed' test_purge_duplicate_comments (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_purge_duplicate_comments) ... skipped 'Only makes sense if scoop is installed' test_run (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_run) ... skipped 'Only makes sense if scoop is installed' test_run_complex (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_run_complex) ... skipped 'Only makes sense if scoop is installed' test_store_form_tuple (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_store_form_tuple) ... skipped 'Only makes sense if scoop is installed' test_store_single_group (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_store_single_group) ... skipped 'Only makes sense if scoop is installed' test_switch_ON_large_tables (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_switch_ON_large_tables) ... skipped 'Only makes sense if scoop is installed' test_switch_off_all_tables (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_switch_off_all_tables) ... skipped 'Only makes sense if scoop is installed' test_switch_on_all_comments (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_switch_on_all_comments) ... skipped 'Only makes sense if scoop is installed' test_time_display_of_loading (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_time_display_of_loading) ... skipped 'Only makes sense if scoop is installed' test_two_runs (integration.environment_scoop_test.MultiprocFrozenSCOOPLocalTest.test_two_runs) ... skipped 'Only makes sense if scoop is installed' test_expand (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_expand) ... skipped 'Only makes sense if scoop is installed' test_expand_after_reload (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_expand_after_reload) ... skipped 'Only makes sense if scoop is installed' test_f_iter_runs (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_f_iter_runs) ... skipped 'Only makes sense if scoop is installed' test_f_iter_runs_auto_load (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_f_iter_runs_auto_load) ... skipped 'Only makes sense if scoop is installed' test_graceful_exit (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_graceful_exit) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_if_results_are_sorted_correctly) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly_manual_runs (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_if_results_are_sorted_correctly_manual_runs) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly_using_map (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetlockTest.test_if_results_are_sorted_correctly_using_map) ... skipped 'Only makes sense if scoop is installed' test_expand (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_expand) ... skipped 'Only makes sense if scoop is installed' test_expand_after_reload (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_expand_after_reload) ... skipped 'Only makes sense if scoop is installed' test_f_iter_runs (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_f_iter_runs) ... skipped 'Only makes sense if scoop is installed' test_f_iter_runs_auto_load (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_f_iter_runs_auto_load) ... skipped 'Only makes sense if scoop is installed' test_graceful_exit (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_graceful_exit) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_if_results_are_sorted_correctly) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly_manual_runs (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_if_results_are_sorted_correctly_manual_runs) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly_using_map (integration.environment_scoop_test.MultiprocFrozenSCOOPSortNetqueueTest.test_if_results_are_sorted_correctly_using_map) ... skipped 'Only makes sense if scoop is installed' test_run (integration.link_multiproc_test.MultiprocLinkLocalTest.test_run) ... ok test_run (integration.link_multiproc_test.MultiprocLinkLockTest.test_run) ... Disabled redirection of `stdout`. ok test_run (integration.link_multiproc_test.MultiprocLinkNoPoolLockTest.test_run) ... ok test_run (integration.link_multiproc_test.MultiprocLinkNoPoolQueueTest.test_run) ... ok test_run (integration.link_multiproc_test.MultiprocLinkQueueTest.test_run) ... ok test_disable (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_disable) ... Disabled redirection of `stdout`. WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter STORE_Test! in parameter STORE_Test! in parameter ok test_file_renaming (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_file_renaming) ... ok test_logfile_creation_normal (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_logfile_creation_normal) ... ok test_logfile_creation_with_errors (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_logfile_creation_with_errors) ... Process-383 2024-11-27 15:43:46,781 pypet.ERROR ERROR ERROR_Test! Process-383 2024-11-27 15:43:46,781 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-383 2024-11-27 15:43:46,787 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-384 2024-11-27 15:43:46,788 pypet.ERROR ERROR ERROR_Test! Process-384 2024-11-27 15:43:46,789 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-385 2024-11-27 15:43:46,798 pypet.ERROR ERROR ERROR_Test! Process-385 2024-11-27 15:43:46,798 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-386 2024-11-27 15:43:46,802 pypet.ERROR ERROR ERROR_Test! Process-386 2024-11-27 15:43:46,802 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-384 2024-11-27 15:43:46,804 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-387 2024-11-27 15:43:46,818 pypet.ERROR ERROR ERROR_Test! Process-387 2024-11-27 15:43:46,818 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-385 2024-11-27 15:43:46,819 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-388 2024-11-27 15:43:46,830 pypet.ERROR ERROR ERROR_Test! Process-388 2024-11-27 15:43:46,830 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-386 2024-11-27 15:43:46,833 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-389 2024-11-27 15:43:46,844 pypet.ERROR ERROR ERROR_Test! Process-389 2024-11-27 15:43:46,844 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-387 2024-11-27 15:43:46,847 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-388 2024-11-27 15:43:46,860 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-389 2024-11-27 15:43:46,873 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:43:47,077 pypet.test ERROR ttt ok test_logfile_old_way_creation_with_errors (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_logfile_old_way_creation_with_errors) ... MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logfile_old_way_disabling_mp_log (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_logfile_old_way_disabling_mp_log) ... Process-397 pypet.ERROR ERROR ERROR_Test! Process-397 pypet.ERROR ERROR ERROR_Test! Process-397 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-397 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-397 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-397 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-398 pypet.ERROR ERROR ERROR_Test! Process-398 pypet.ERROR ERROR ERROR_Test! Process-398 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-398 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-399 pypet.ERROR ERROR ERROR_Test! Process-399 pypet.ERROR ERROR ERROR_Test! Process-399 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-399 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-398 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-398 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-400 pypet.ERROR ERROR ERROR_Test! Process-400 pypet.ERROR ERROR ERROR_Test! Process-400 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-400 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-401 pypet.ERROR ERROR ERROR_Test! Process-401 pypet.ERROR ERROR ERROR_Test! Process-401 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-401 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-399 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-399 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-402 pypet.ERROR ERROR ERROR_Test! Process-402 pypet.ERROR ERROR ERROR_Test! Process-402 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-402 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-400 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-400 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-403 pypet.ERROR ERROR ERROR_Test! Process-403 pypet.ERROR ERROR ERROR_Test! Process-403 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-403 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-401 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-401 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-402 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-402 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-403 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-403 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logging_show_progress (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_logging_show_progress) ... MainProcess 2024-11-27 15:43:47,837 progress ERROR PROGRESS: Finished 0/7 runs [ ] 0.0% Process-404 2024-11-27 15:43:47,850 pypet.ERROR ERROR ERROR_Test! Process-404 2024-11-27 15:43:47,850 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-404 2024-11-27 15:43:47,856 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-405 2024-11-27 15:43:47,857 pypet.ERROR ERROR ERROR_Test! Process-405 2024-11-27 15:43:47,857 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-406 2024-11-27 15:43:47,866 pypet.ERROR ERROR ERROR_Test! Process-406 2024-11-27 15:43:47,866 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:43:47,867 progress ERROR PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 Process-407 2024-11-27 15:43:47,870 pypet.ERROR ERROR ERROR_Test! Process-407 2024-11-27 15:43:47,870 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-405 2024-11-27 15:43:47,872 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:43:47,881 progress ERROR PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 Process-408 2024-11-27 15:43:47,886 pypet.ERROR ERROR ERROR_Test! Process-408 2024-11-27 15:43:47,886 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-406 2024-11-27 15:43:47,887 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:43:47,896 progress ERROR PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 Process-409 2024-11-27 15:43:47,899 pypet.ERROR ERROR ERROR_Test! Process-409 2024-11-27 15:43:47,899 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-407 2024-11-27 15:43:47,901 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:43:47,910 progress ERROR PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 Process-410 2024-11-27 15:43:47,913 pypet.ERROR ERROR ERROR_Test! Process-410 2024-11-27 15:43:47,913 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-408 2024-11-27 15:43:47,915 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:43:47,923 progress ERROR PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 Process-409 2024-11-27 15:43:47,928 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:43:47,935 progress ERROR PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 Process-410 2024-11-27 15:43:47,941 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:43:47,949 progress ERROR PROGRESS: Finished 7/7 runs [====================]100.0% ok test_logging_show_progress_print (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_logging_show_progress_print) ... MainProcess 2024-11-27 15:43:48,148 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2024-11-27 15:43:48,195 prostdout CRITICAL PROGRESS: Finished 0/7 runs [ ] 0.0% Process-411 2024-11-27 15:43:48,208 prostdout CRITICAL Established redirection of `stdout`. Process-411 2024-11-27 15:43:48,209 pypet.ERROR ERROR ERROR_Test! Process-411 2024-11-27 15:43:48,209 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-412 2024-11-27 15:43:48,215 prostdout CRITICAL Established redirection of `stdout`. Process-411 2024-11-27 15:43:48,216 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-412 2024-11-27 15:43:48,217 pypet.ERROR ERROR ERROR_Test! Process-412 2024-11-27 15:43:48,217 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-413 2024-11-27 15:43:48,223 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2024-11-27 15:43:48,225 prostdout CRITICAL PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 Process-413 2024-11-27 15:43:48,226 pypet.ERROR ERROR ERROR_Test! Process-413 2024-11-27 15:43:48,226 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-412 2024-11-27 15:43:48,231 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-414 2024-11-27 15:43:48,231 prostdout CRITICAL Established redirection of `stdout`. Process-414 2024-11-27 15:43:48,232 pypet.ERROR ERROR ERROR_Test! Process-414 2024-11-27 15:43:48,232 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:43:48,241 prostdout CRITICAL PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 Process-415 2024-11-27 15:43:48,246 prostdout CRITICAL Established redirection of `stdout`. Process-415 2024-11-27 15:43:48,247 pypet.ERROR ERROR ERROR_Test! Process-415 2024-11-27 15:43:48,247 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-413 2024-11-27 15:43:48,247 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-416 2024-11-27 15:43:48,256 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2024-11-27 15:43:48,256 prostdout CRITICAL PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 Process-416 2024-11-27 15:43:48,257 pypet.ERROR ERROR ERROR_Test! Process-416 2024-11-27 15:43:48,257 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-414 2024-11-27 15:43:48,261 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:43:48,271 prostdout CRITICAL PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 Process-417 2024-11-27 15:43:48,277 prostdout CRITICAL Established redirection of `stdout`. Process-415 2024-11-27 15:43:48,277 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-417 2024-11-27 15:43:48,278 pypet.ERROR ERROR ERROR_Test! Process-417 2024-11-27 15:43:48,278 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:43:48,287 prostdout CRITICAL PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 Process-416 2024-11-27 15:43:48,291 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:43:48,299 prostdout CRITICAL PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 Process-417 2024-11-27 15:43:48,303 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:43:48,312 prostdout CRITICAL PROGRESS: Finished 7/7 runs [====================]100.0% ok test_logging_stdout (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_logging_stdout) ... MainProcess 2024-11-27 15:43:48,515 STDOUT CRITICAL Established redirection of `stdout`. MainProcess 2024-11-27 15:43:48,529 pypet.only.ERROR ERROR Test of Error Logging during run! MainProcess 2024-11-27 15:43:48,531 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:43:48,781 STDOUT CRITICAL sTdOuTLoGGinG ok test_throw_error_when_specifying_config_and_old_method (integration.logging_multiproc_test.MultiprocNoPoolLockLoggingTest.test_throw_error_when_specifying_config_and_old_method) ... ok test_NOT_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_NOT_purge_duplicate_comments) ... Disabled redirection of `stdout`. Disabled redirection of `stdout`. ok test_a_large_run (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_a_large_run) ... ok test_errors (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_errors) ... ok test_expand (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_expand_after_reload) ... ok test_file_overwriting (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_file_overwriting) ... ok test_just_one_run (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_just_one_run) ... ok test_niceness (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_niceness) ... ok test_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_purge_duplicate_comments) ... MainProcess 2024-11-27 15:43:59,006 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__35437_2024_11_27_15h43m58s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_run) ... ok test_run_complex (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_run_complex) ... ok test_store_form_tuple (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_store_form_tuple) ... ok test_store_single_group (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_store_single_group) ... MainProcess 2024-11-27 15:44:03,734 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_switch_off_all_tables) ... ok test_switch_on_all_comments (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_switch_on_all_comments) ... ok test_time_display_of_loading (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_time_display_of_loading) ... ok test_two_runs (integration.environment_multiproc_test.MultiprocNoPoolLockTest.test_two_runs) ... ok test_disable (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_disable) ... WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter STORE_Test! in parameter STORE_Test! in parameter ok test_file_renaming (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_file_renaming) ... ok test_logfile_creation_normal (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_logfile_creation_normal) ... ok test_logfile_creation_with_errors (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_logfile_creation_with_errors) ... Process-492 2024-11-27 15:44:14,089 pypet.ERROR ERROR ERROR_Test! Process-492 2024-11-27 15:44:14,089 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-493 2024-11-27 15:44:14,096 pypet.ERROR ERROR ERROR_Test! Process-493 2024-11-27 15:44:14,096 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-494 2024-11-27 15:44:14,104 pypet.ERROR ERROR ERROR_Test! Process-494 2024-11-27 15:44:14,104 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:14,110 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-495 2024-11-27 15:44:14,121 pypet.ERROR ERROR ERROR_Test! Process-495 2024-11-27 15:44:14,121 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:14,123 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-496 2024-11-27 15:44:14,127 pypet.ERROR ERROR ERROR_Test! Process-496 2024-11-27 15:44:14,127 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:14,132 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-497 2024-11-27 15:44:14,136 pypet.ERROR ERROR ERROR_Test! Process-497 2024-11-27 15:44:14,136 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:14,142 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:14,147 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-498 2024-11-27 15:44:14,150 pypet.ERROR ERROR ERROR_Test! Process-498 2024-11-27 15:44:14,150 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:14,152 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:14,157 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:14,378 pypet.test ERROR ttt ok test_logfile_old_way_creation_with_errors (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_logfile_old_way_creation_with_errors) ... MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logfile_old_way_disabling_mp_log (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_logfile_old_way_disabling_mp_log) ... Process-510 pypet.ERROR ERROR ERROR_Test! Process-510 pypet.ERROR ERROR ERROR_Test! Process-510 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-510 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-511 pypet.ERROR ERROR ERROR_Test! Process-511 pypet.ERROR ERROR ERROR_Test! Process-511 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-511 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-512 pypet.ERROR ERROR ERROR_Test! Process-512 pypet.ERROR ERROR ERROR_Test! Process-512 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-512 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-513 pypet.ERROR ERROR ERROR_Test! Process-513 pypet.ERROR ERROR ERROR_Test! Process-513 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-513 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-514 pypet.ERROR ERROR ERROR_Test! Process-514 pypet.ERROR ERROR ERROR_Test! Process-514 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-514 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-515 pypet.ERROR ERROR ERROR_Test! Process-515 pypet.ERROR ERROR ERROR_Test! Process-515 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-515 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-516 pypet.ERROR ERROR ERROR_Test! QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-516 pypet.ERROR ERROR ERROR_Test! Process-516 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-516 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logging_show_progress (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_logging_show_progress) ... MainProcess 2024-11-27 15:44:15,173 progress ERROR PROGRESS: Finished 0/7 runs [ ] 0.0% Process-519 2024-11-27 15:44:15,188 pypet.ERROR ERROR ERROR_Test! Process-519 2024-11-27 15:44:15,188 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-520 2024-11-27 15:44:15,196 pypet.ERROR ERROR ERROR_Test! Process-520 2024-11-27 15:44:15,196 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:44:15,196 progress ERROR PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 MainProcess 2024-11-27 15:44:15,203 progress ERROR PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 Process-521 2024-11-27 15:44:15,205 pypet.ERROR ERROR ERROR_Test! Process-521 2024-11-27 15:44:15,205 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:15,210 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:15,214 progress ERROR PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 QueueProcess 2024-11-27 15:44:15,222 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-522 2024-11-27 15:44:15,222 pypet.ERROR ERROR ERROR_Test! Process-522 2024-11-27 15:44:15,222 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:44:15,228 progress ERROR PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 Process-523 2024-11-27 15:44:15,229 pypet.ERROR ERROR ERROR_Test! Process-523 2024-11-27 15:44:15,229 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:15,231 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:15,235 progress ERROR PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 Process-524 2024-11-27 15:44:15,236 pypet.ERROR ERROR ERROR_Test! Process-524 2024-11-27 15:44:15,236 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:15,240 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:15,245 progress ERROR PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 QueueProcess 2024-11-27 15:44:15,247 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:15,254 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-525 2024-11-27 15:44:15,254 pypet.ERROR ERROR ERROR_Test! Process-525 2024-11-27 15:44:15,254 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:44:15,258 progress ERROR PROGRESS: Finished 7/7 runs [====================]100.0% QueueProcess 2024-11-27 15:44:15,260 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ok test_logging_show_progress_print (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_logging_show_progress_print) ... MainProcess 2024-11-27 15:44:15,484 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2024-11-27 15:44:15,547 prostdout CRITICAL PROGRESS: Finished 0/7 runs [ ] 0.0% QueueProcess 2024-11-27 15:44:15,552 prostdout CRITICAL Established redirection of `stdout`. Process-528 2024-11-27 15:44:15,561 prostdout CRITICAL Established redirection of `stdout`. Process-528 2024-11-27 15:44:15,562 pypet.ERROR ERROR ERROR_Test! Process-528 2024-11-27 15:44:15,562 pypet.CRITICAL CRITICAL CRITICAL_Test! Process-529 2024-11-27 15:44:15,570 prostdout CRITICAL Established redirection of `stdout`. Process-529 2024-11-27 15:44:15,571 pypet.ERROR ERROR ERROR_Test! Process-529 2024-11-27 15:44:15,571 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:44:15,572 prostdout CRITICAL PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 Process-530 2024-11-27 15:44:15,577 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2024-11-27 15:44:15,578 prostdout CRITICAL PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 Process-530 2024-11-27 15:44:15,579 pypet.ERROR ERROR ERROR_Test! Process-530 2024-11-27 15:44:15,579 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:15,585 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:15,588 prostdout CRITICAL PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 Process-531 2024-11-27 15:44:15,594 prostdout CRITICAL Established redirection of `stdout`. Process-531 2024-11-27 15:44:15,596 pypet.ERROR ERROR ERROR_Test! Process-531 2024-11-27 15:44:15,596 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:15,598 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-532 2024-11-27 15:44:15,602 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2024-11-27 15:44:15,602 prostdout CRITICAL PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 Process-532 2024-11-27 15:44:15,603 pypet.ERROR ERROR ERROR_Test! Process-532 2024-11-27 15:44:15,603 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:15,606 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:15,608 prostdout CRITICAL PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 Process-533 2024-11-27 15:44:15,610 prostdout CRITICAL Established redirection of `stdout`. Process-533 2024-11-27 15:44:15,611 pypet.ERROR ERROR ERROR_Test! Process-533 2024-11-27 15:44:15,611 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:15,616 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:15,617 prostdout CRITICAL PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 QueueProcess 2024-11-27 15:44:15,621 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter Process-534 2024-11-27 15:44:15,624 prostdout CRITICAL Established redirection of `stdout`. Process-534 2024-11-27 15:44:15,625 pypet.ERROR ERROR ERROR_Test! Process-534 2024-11-27 15:44:15,625 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:15,626 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:15,630 prostdout CRITICAL PROGRESS: Finished 7/7 runs [====================]100.0% QueueProcess 2024-11-27 15:44:15,631 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ok test_logging_stdout (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_logging_stdout) ... MainProcess 2024-11-27 15:44:15,852 STDOUT CRITICAL Established redirection of `stdout`. MainProcess 2024-11-27 15:44:15,866 pypet.only.ERROR ERROR Test of Error Logging during run! MainProcess 2024-11-27 15:44:15,868 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:16,113 STDOUT CRITICAL sTdOuTLoGGinG ok test_throw_error_when_specifying_config_and_old_method (integration.logging_multiproc_test.MultiprocNoPoolQueueLoggingTest.test_throw_error_when_specifying_config_and_old_method) ... ok test_expand (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_expand) ... Disabled redirection of `stdout`. Disabled redirection of `stdout`. ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2024-11-27 15:44:19,434 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__95188` did NOT complete: `run_00000006, run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocNoPoolSortLocalTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2024-11-27 15:44:24,454 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__94552` did NOT complete: `run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocNoPoolSortLockTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2024-11-27 15:44:29,337 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__20255` did NOT complete: `run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocNoPoolSortPipeTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2024-11-27 15:44:34,391 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__93518` did NOT complete: `run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocNoPoolSortQueueTest.test_if_results_are_sorted_correctly_using_map) ... ok test_disable (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_disable) ... WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter STORE_Test! in parameter ok test_file_renaming (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_file_renaming) ... ok test_logfile_creation_normal (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_logfile_creation_normal) ... ok test_logfile_creation_with_errors (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_logfile_creation_with_errors) ... ForkPoolWorker-726 2024-11-27 15:44:36,777 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-726 2024-11-27 15:44:36,777 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-727 2024-11-27 15:44:36,780 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-727 2024-11-27 15:44:36,780 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-726 2024-11-27 15:44:36,784 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-726 2024-11-27 15:44:36,793 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-726 2024-11-27 15:44:36,793 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-727 2024-11-27 15:44:36,797 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-727 2024-11-27 15:44:36,806 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-727 2024-11-27 15:44:36,807 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-726 2024-11-27 15:44:36,807 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-726 2024-11-27 15:44:36,813 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-726 2024-11-27 15:44:36,813 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-727 2024-11-27 15:44:36,814 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-727 2024-11-27 15:44:36,819 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-727 2024-11-27 15:44:36,819 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-726 2024-11-27 15:44:36,820 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-726 2024-11-27 15:44:36,825 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-726 2024-11-27 15:44:36,825 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-727 2024-11-27 15:44:36,826 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-726 2024-11-27 15:44:36,832 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:37,028 pypet.test ERROR ttt ok test_logfile_old_way_creation_with_errors (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_logfile_old_way_creation_with_errors) ... MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logfile_old_way_disabling_mp_log (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_logfile_old_way_disabling_mp_log) ... ForkPoolWorker-730 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-730 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-730 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-730 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-731 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-731 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-731 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-731 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-730 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-730 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-730 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-730 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-730 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-730 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-731 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-731 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-731 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-731 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-731 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-731 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-730 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-730 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-730 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-730 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-730 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-730 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-731 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-731 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-731 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-731 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-731 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-731 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-730 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-730 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-730 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-730 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-730 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-730 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-731 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-731 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-730 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-730 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logging_show_progress (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_logging_show_progress) ... MainProcess 2024-11-27 15:44:37,727 progress ERROR PROGRESS: Finished 0/7 runs [ ] 0.0% ForkPoolWorker-732 2024-11-27 15:44:37,732 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-732 2024-11-27 15:44:37,732 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-733 2024-11-27 15:44:37,734 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-733 2024-11-27 15:44:37,735 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-732 2024-11-27 15:44:37,738 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:37,746 progress ERROR PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 ForkPoolWorker-732 2024-11-27 15:44:37,747 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-732 2024-11-27 15:44:37,747 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-733 2024-11-27 15:44:37,751 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:37,760 progress ERROR PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 ForkPoolWorker-733 2024-11-27 15:44:37,760 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-733 2024-11-27 15:44:37,761 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-732 2024-11-27 15:44:37,761 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:37,766 progress ERROR PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 ForkPoolWorker-732 2024-11-27 15:44:37,767 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-732 2024-11-27 15:44:37,767 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-733 2024-11-27 15:44:37,768 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:37,772 progress ERROR PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 ForkPoolWorker-733 2024-11-27 15:44:37,773 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-733 2024-11-27 15:44:37,773 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-732 2024-11-27 15:44:37,774 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:37,777 progress ERROR PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 ForkPoolWorker-732 2024-11-27 15:44:37,779 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-732 2024-11-27 15:44:37,779 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-733 2024-11-27 15:44:37,780 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:37,784 progress ERROR PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 ForkPoolWorker-732 2024-11-27 15:44:37,785 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:37,788 progress ERROR PROGRESS: Finished 7/7 runs [====================]100.0% ok test_logging_show_progress_print (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_logging_show_progress_print) ... MainProcess 2024-11-27 15:44:37,986 prostdout CRITICAL Established redirection of `stdout`. ForkPoolWorker-734 2024-11-27 15:44:38,044 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2024-11-27 15:44:38,046 prostdout CRITICAL PROGRESS: Finished 0/7 runs [ ] 0.0% ForkPoolWorker-734 2024-11-27 15:44:38,051 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-734 2024-11-27 15:44:38,051 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-735 2024-11-27 15:44:38,051 prostdout CRITICAL Established redirection of `stdout`. ForkPoolWorker-735 2024-11-27 15:44:38,054 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-735 2024-11-27 15:44:38,054 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-734 2024-11-27 15:44:38,058 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-734 2024-11-27 15:44:38,066 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-734 2024-11-27 15:44:38,066 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:44:38,067 prostdout CRITICAL PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 ForkPoolWorker-735 2024-11-27 15:44:38,071 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ForkPoolWorker-735 2024-11-27 15:44:38,080 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-735 2024-11-27 15:44:38,080 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:44:38,080 prostdout CRITICAL PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 ForkPoolWorker-734 2024-11-27 15:44:38,081 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:38,085 prostdout CRITICAL PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 ForkPoolWorker-734 2024-11-27 15:44:38,086 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-734 2024-11-27 15:44:38,086 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-735 2024-11-27 15:44:38,087 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:38,091 prostdout CRITICAL PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 ForkPoolWorker-735 2024-11-27 15:44:38,092 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-735 2024-11-27 15:44:38,092 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-734 2024-11-27 15:44:38,093 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:38,097 prostdout CRITICAL PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 ForkPoolWorker-734 2024-11-27 15:44:38,098 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-734 2024-11-27 15:44:38,098 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-735 2024-11-27 15:44:38,099 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:38,103 prostdout CRITICAL PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 ForkPoolWorker-734 2024-11-27 15:44:38,105 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:38,108 prostdout CRITICAL PROGRESS: Finished 7/7 runs [====================]100.0% ok test_logging_stdout (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_logging_stdout) ... MainProcess 2024-11-27 15:44:38,307 STDOUT CRITICAL Established redirection of `stdout`. MainProcess 2024-11-27 15:44:38,321 pypet.only.ERROR ERROR Test of Error Logging during run! MainProcess 2024-11-27 15:44:38,323 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:38,570 STDOUT CRITICAL sTdOuTLoGGinG ok test_throw_error_when_specifying_config_and_old_method (integration.logging_multiproc_test.MultiprocPoolLockLoggingTest.test_throw_error_when_specifying_config_and_old_method) ... ok test_disable (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_disable) ... Disabled redirection of `stdout`. Disabled redirection of `stdout`. WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! WARNING_Test! ERROR_Test! CRITICAL_Test! STORE_Test! in parameter STORE_Test! in parameter STORE_Test! in parameter STORE_Test! in parameter STORE_Test! in parameter STORE_Test! in parameter STORE_Test! in parameter ok test_file_renaming (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_file_renaming) ... ok test_logfile_creation_normal (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_logfile_creation_normal) ... ok test_logfile_creation_with_errors (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_logfile_creation_with_errors) ... ForkPoolWorker-746 2024-11-27 15:44:39,361 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-746 2024-11-27 15:44:39,361 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-747 2024-11-27 15:44:39,362 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-747 2024-11-27 15:44:39,362 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-746 2024-11-27 15:44:39,365 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-746 2024-11-27 15:44:39,366 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-747 2024-11-27 15:44:39,372 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-747 2024-11-27 15:44:39,372 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-746 2024-11-27 15:44:39,373 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-746 2024-11-27 15:44:39,373 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-747 2024-11-27 15:44:39,375 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-747 2024-11-27 15:44:39,376 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-746 2024-11-27 15:44:39,377 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-746 2024-11-27 15:44:39,377 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:39,380 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:39,389 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:39,395 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:39,401 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:39,407 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:39,412 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:39,417 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:39,625 pypet.test ERROR ttt ok test_logfile_old_way_creation_with_errors (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_logfile_old_way_creation_with_errors) ... MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logfile_old_way_disabling_mp_log (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_logfile_old_way_disabling_mp_log) ... ForkPoolWorker-754 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-754 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-754 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-754 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-755 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-755 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-755 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-755 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-755 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-755 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-755 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-755 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-754 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-754 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-754 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-754 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-755 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-755 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-755 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-755 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-754 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-754 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-754 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-754 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-755 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-755 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-755 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-755 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess pypet.test ERROR ttt MainProcess pypet.test ERROR ttt ok test_logging_show_progress (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_logging_show_progress) ... MainProcess 2024-11-27 15:44:40,394 progress ERROR PROGRESS: Finished 0/7 runs [ ] 0.0% ForkPoolWorker-758 2024-11-27 15:44:40,401 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-758 2024-11-27 15:44:40,401 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-759 2024-11-27 15:44:40,403 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-759 2024-11-27 15:44:40,403 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-758 2024-11-27 15:44:40,406 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-758 2024-11-27 15:44:40,406 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:44:40,406 progress ERROR PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 ForkPoolWorker-758 2024-11-27 15:44:40,412 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-758 2024-11-27 15:44:40,412 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-759 2024-11-27 15:44:40,413 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-759 2024-11-27 15:44:40,413 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:44:40,414 progress ERROR PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 MainProcess 2024-11-27 15:44:40,415 progress ERROR PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 MainProcess 2024-11-27 15:44:40,415 progress ERROR PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 ForkPoolWorker-758 2024-11-27 15:44:40,415 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-758 2024-11-27 15:44:40,415 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:44:40,416 progress ERROR PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 ForkPoolWorker-759 2024-11-27 15:44:40,417 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-759 2024-11-27 15:44:40,417 pypet.CRITICAL CRITICAL CRITICAL_Test! QueueProcess 2024-11-27 15:44:40,421 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:40,429 progress ERROR PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 QueueProcess 2024-11-27 15:44:40,431 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:40,435 progress ERROR PROGRESS: Finished 7/7 runs [====================]100.0% QueueProcess 2024-11-27 15:44:40,438 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:40,443 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:40,448 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:40,453 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:40,458 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ok test_logging_show_progress_print (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_logging_show_progress_print) ... MainProcess 2024-11-27 15:44:40,673 prostdout CRITICAL Established redirection of `stdout`. QueueProcess 2024-11-27 15:44:40,742 prostdout CRITICAL Established redirection of `stdout`. MainProcess 2024-11-27 15:44:40,749 prostdout CRITICAL PROGRESS: Finished 0/7 runs [ ] 0.0% ForkPoolWorker-762 2024-11-27 15:44:40,750 prostdout CRITICAL Established redirection of `stdout`. ForkPoolWorker-763 2024-11-27 15:44:40,755 prostdout CRITICAL Established redirection of `stdout`. ForkPoolWorker-762 2024-11-27 15:44:40,759 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-762 2024-11-27 15:44:40,759 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-763 2024-11-27 15:44:40,763 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-763 2024-11-27 15:44:40,764 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-762 2024-11-27 15:44:40,765 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-762 2024-11-27 15:44:40,765 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:44:40,766 prostdout CRITICAL PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:00 MainProcess 2024-11-27 15:44:40,775 prostdout CRITICAL PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:00 MainProcess 2024-11-27 15:44:40,775 prostdout CRITICAL PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:00 ForkPoolWorker-763 2024-11-27 15:44:40,776 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-763 2024-11-27 15:44:40,776 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-762 2024-11-27 15:44:40,776 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-762 2024-11-27 15:44:40,776 pypet.CRITICAL CRITICAL CRITICAL_Test! ForkPoolWorker-763 2024-11-27 15:44:40,779 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-763 2024-11-27 15:44:40,779 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:44:40,780 prostdout CRITICAL PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:00 ForkPoolWorker-762 2024-11-27 15:44:40,780 pypet.ERROR ERROR ERROR_Test! ForkPoolWorker-762 2024-11-27 15:44:40,780 pypet.CRITICAL CRITICAL CRITICAL_Test! MainProcess 2024-11-27 15:44:40,781 prostdout CRITICAL PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:00 QueueProcess 2024-11-27 15:44:40,782 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:40,789 prostdout CRITICAL PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:00 QueueProcess 2024-11-27 15:44:40,791 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:40,795 prostdout CRITICAL PROGRESS: Finished 7/7 runs [====================]100.0% QueueProcess 2024-11-27 15:44:40,797 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:40,802 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:40,807 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:40,812 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter QueueProcess 2024-11-27 15:44:40,817 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter ok test_logging_stdout (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_logging_stdout) ... MainProcess 2024-11-27 15:44:41,031 STDOUT CRITICAL Established redirection of `stdout`. MainProcess 2024-11-27 15:44:41,046 pypet.only.ERROR ERROR Test of Error Logging during run! MainProcess 2024-11-27 15:44:41,048 pypet.tests.integration.logging_test.LogWhenStored ERROR STORE_Test! in parameter MainProcess 2024-11-27 15:44:41,294 STDOUT CRITICAL sTdOuTLoGGinG ok test_throw_error_when_specifying_config_and_old_method (integration.logging_multiproc_test.MultiprocPoolQueueLoggingTest.test_throw_error_when_specifying_config_and_old_method) ... ok test_NOT_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_NOT_purge_duplicate_comments) ... Disabled redirection of `stdout`. Disabled redirection of `stdout`. ok test_a_large_run (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_a_large_run) ... ok test_errors (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_errors) ... ok test_expand (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_expand_after_reload) ... ok test_file_overwriting (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_file_overwriting) ... ok test_just_one_run (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_just_one_run) ... ok test_niceness (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_niceness) ... ok test_purge_duplicate_comments (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_purge_duplicate_comments) ... MainProcess 2024-11-27 15:44:50,340 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__38093_2024_11_27_15h44m50s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_run) ... ok test_run_complex (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_run_complex) ... ok test_store_form_tuple (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_store_form_tuple) ... ok test_store_single_group (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_store_single_group) ... MainProcess 2024-11-27 15:44:54,374 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_switch_off_all_tables) ... ok test_switch_on_all_comments (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_switch_on_all_comments) ... ok test_time_display_of_loading (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_time_display_of_loading) ... ok test_two_runs (integration.environment_multiproc_test.MultiprocPoolQueueTest.test_two_runs) ... ok test_expand (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2024-11-27 15:45:06,950 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__97339` did NOT complete: `run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocPoolSortLocalTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2024-11-27 15:45:11,806 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__34167` did NOT complete: `run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocPoolSortLockTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2024-11-27 15:45:16,701 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__16053` did NOT complete: `run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocPoolSortPipeTest.test_if_results_are_sorted_correctly_using_map) ... ok test_expand (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_expand) ... ok test_expand_after_reload (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_expand_after_reload) ... ok test_f_iter_runs (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2024-11-27 15:45:21,680 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__95509` did NOT complete: `run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.environment_multiproc_test.MultiprocPoolSortQueueTest.test_if_results_are_sorted_correctly_using_map) ... ok test_NOT_purge_duplicate_comments (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_NOT_purge_duplicate_comments) ... skipped 'Only makes sense if scoop is installed' test_a_large_run (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_a_large_run) ... skipped 'Only makes sense if scoop is installed' test_errors (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_errors) ... skipped 'Only makes sense if scoop is installed' test_expand (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_expand) ... skipped 'Only makes sense if scoop is installed' test_expand_after_reload (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_expand_after_reload) ... skipped 'Only makes sense if scoop is installed' test_file_overwriting (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_file_overwriting) ... skipped 'Only makes sense if scoop is installed' test_just_one_run (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_just_one_run) ... skipped 'Only makes sense if scoop is installed' test_niceness (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_niceness) ... skipped 'Only makes sense if scoop is installed' test_purge_duplicate_comments (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_purge_duplicate_comments) ... skipped 'Only makes sense if scoop is installed' test_run (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_run) ... skipped 'Only makes sense if scoop is installed' test_run_complex (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_run_complex) ... skipped 'Only makes sense if scoop is installed' test_store_form_tuple (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_store_form_tuple) ... skipped 'Only makes sense if scoop is installed' test_store_single_group (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_store_single_group) ... skipped 'Only makes sense if scoop is installed' test_switch_ON_large_tables (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_switch_ON_large_tables) ... skipped 'Only makes sense if scoop is installed' test_switch_off_all_tables (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_switch_off_all_tables) ... skipped 'Only makes sense if scoop is installed' test_switch_on_all_comments (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_switch_on_all_comments) ... skipped 'Only makes sense if scoop is installed' test_time_display_of_loading (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_time_display_of_loading) ... skipped 'Only makes sense if scoop is installed' test_two_runs (integration.environment_scoop_test.MultiprocSCOOPNetlockTest.test_two_runs) ... skipped 'Only makes sense if scoop is installed' test_NOT_purge_duplicate_comments (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_NOT_purge_duplicate_comments) ... skipped 'Only makes sense if scoop is installed and running' test_a_large_run (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_a_large_run) ... skipped 'Only makes sense if scoop is installed and running' test_errors (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_errors) ... skipped 'Only makes sense if scoop is installed and running' test_expand (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_expand) ... skipped 'Only makes sense if scoop is installed and running' test_expand_after_reload (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_expand_after_reload) ... skipped 'Only makes sense if scoop is installed and running' test_file_overwriting (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_file_overwriting) ... skipped 'Only makes sense if scoop is installed and running' test_just_one_run (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_just_one_run) ... skipped 'Only makes sense if scoop is installed and running' test_niceness (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_niceness) ... skipped 'Only makes sense if scoop is installed and running' test_purge_duplicate_comments (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_purge_duplicate_comments) ... skipped 'Only makes sense if scoop is installed and running' test_run (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_run) ... skipped 'Only makes sense if scoop is installed and running' test_run_complex (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_run_complex) ... skipped 'Only makes sense if scoop is installed and running' test_store_form_tuple (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_store_form_tuple) ... skipped 'Only makes sense if scoop is installed and running' test_store_single_group (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_store_single_group) ... skipped 'Only makes sense if scoop is installed and running' test_switch_ON_large_tables (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_switch_ON_large_tables) ... skipped 'Only makes sense if scoop is installed and running' test_switch_off_all_tables (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_switch_off_all_tables) ... skipped 'Only makes sense if scoop is installed and running' test_switch_on_all_comments (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_switch_on_all_comments) ... skipped 'Only makes sense if scoop is installed and running' test_time_display_of_loading (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_time_display_of_loading) ... skipped 'Only makes sense if scoop is installed and running' test_two_runs (integration.environment_scoop_test.MultiprocSCOOPNetqueueTest.test_two_runs) ... skipped 'Only makes sense if scoop is installed and running' test_expand (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_expand) ... skipped 'Only makes sense if scoop is installed' test_expand_after_reload (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_expand_after_reload) ... skipped 'Only makes sense if scoop is installed' test_f_iter_runs (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_f_iter_runs) ... skipped 'Only makes sense if scoop is installed' test_f_iter_runs_auto_load (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_f_iter_runs_auto_load) ... skipped 'Only makes sense if scoop is installed' test_graceful_exit (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_graceful_exit) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_if_results_are_sorted_correctly) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly_manual_runs (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_if_results_are_sorted_correctly_manual_runs) ... skipped 'Only makes sense if scoop is installed' test_if_results_are_sorted_correctly_using_map (integration.environment_scoop_test.MultiprocSCOOPSortLocalTest.test_if_results_are_sorted_correctly_using_map) ... skipped 'Only makes sense if scoop is installed' test_giant_matrices (integration.shared_data_test.MultiprocStorageLockTest.test_giant_matrices) ... ok test_loading_run (integration.shared_data_test.MultiprocStorageLockTest.test_loading_run) ... ok test_run (integration.shared_data_test.MultiprocStorageLockTest.test_run) ... ok test_run_large (integration.shared_data_test.MultiprocStorageLockTest.test_run_large) ... ok test_giant_matrices (integration.shared_data_test.MultiprocStorageNetlockTest.test_giant_matrices) ... skipped 'Can only be run with zmq' test_loading_run (integration.shared_data_test.MultiprocStorageNetlockTest.test_loading_run) ... skipped 'Can only be run with zmq' test_run (integration.shared_data_test.MultiprocStorageNetlockTest.test_run) ... skipped 'Can only be run with zmq' test_run_large (integration.shared_data_test.MultiprocStorageNetlockTest.test_run_large) ... skipped 'Can only be run with zmq' test_giant_matrices (integration.shared_data_test.MultiprocStorageNoPoolLockTest.test_giant_matrices) ... ok test_loading_run (integration.shared_data_test.MultiprocStorageNoPoolLockTest.test_loading_run) ... ok test_run (integration.shared_data_test.MultiprocStorageNoPoolLockTest.test_run) ... ok test_run_large (integration.shared_data_test.MultiprocStorageNoPoolLockTest.test_run_large) ... ok test_v_property (unittests.utils_test.NamingSchemeTest.test_v_property) ... ok test_v_property_slots (unittests.utils_test.NamingSchemeTest.test_v_property_slots) ... ok test_cannot_expand_and_not_explore_throwing_type_error (pypet.tests.unittests.parameter_test.ParameterTest.test_cannot_expand_and_not_explore_throwing_type_error) ... ok test_equal_values (pypet.tests.unittests.parameter_test.ParameterTest.test_equal_values) ... ok test_expanding (pypet.tests.unittests.parameter_test.ParameterTest.test_expanding) ... ok test_expanding_type_error (pypet.tests.unittests.parameter_test.ParameterTest.test_expanding_type_error) ... ok test_exploration (pypet.tests.unittests.parameter_test.ParameterTest.test_exploration) ... ok test_get_data (pypet.tests.unittests.parameter_test.ParameterTest.test_get_data) ... ok test_get_item (pypet.tests.unittests.parameter_test.ParameterTest.test_get_item) ... ok test_meta_settings (pypet.tests.unittests.parameter_test.ParameterTest.test_meta_settings) ... ok test_param_accepts_not_unsupported_data (pypet.tests.unittests.parameter_test.ParameterTest.test_param_accepts_not_unsupported_data) ... ok test_parameter_access_throws_ValueError (pypet.tests.unittests.parameter_test.ParameterTest.test_parameter_access_throws_ValueError) ... ok test_parameter_locking (pypet.tests.unittests.parameter_test.ParameterTest.test_parameter_locking) ... ok test_pickling_with_mocking_multiprocessing (pypet.tests.unittests.parameter_test.ParameterTest.test_pickling_with_mocking_multiprocessing) ... ok test_pickling_without_multiprocessing (pypet.tests.unittests.parameter_test.ParameterTest.test_pickling_without_multiprocessing) ... ok test_rename (pypet.tests.unittests.parameter_test.ParameterTest.test_rename) ... ok test_resizing_and_deletion (pypet.tests.unittests.parameter_test.ParameterTest.test_resizing_and_deletion) ... ok test_storage_and_loading (pypet.tests.unittests.parameter_test.ParameterTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (pypet.tests.unittests.parameter_test.ParameterTest.test_store_load_with_hdf5) ... ok test_store_load_with_hdf5_no_data (pypet.tests.unittests.parameter_test.ParameterTest.test_store_load_with_hdf5_no_data) ... ok test_the_insertion_made_implicetly_in_setUp (pypet.tests.unittests.parameter_test.ParameterTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_type_error_for_exploring_if_range_does_not_match (pypet.tests.unittests.parameter_test.ParameterTest.test_type_error_for_exploring_if_range_does_not_match) ... ok test_type_error_for_get_item (pypet.tests.unittests.parameter_test.ParameterTest.test_type_error_for_get_item) ... ok test_type_error_for_not_supported_data (pypet.tests.unittests.parameter_test.ParameterTest.test_type_error_for_not_supported_data) ... ok test_type_error_for_shrink (pypet.tests.unittests.parameter_test.ParameterTest.test_type_error_for_shrink) ... ok test_values_of_same_type (pypet.tests.unittests.parameter_test.ParameterTest.test_values_of_same_type) ... ok test_cannot_expand_and_not_explore_throwing_type_error (unittests.parameter_test.PickleParameterTest.test_cannot_expand_and_not_explore_throwing_type_error) ... ok test_equal_values (unittests.parameter_test.PickleParameterTest.test_equal_values) ... ok test_expanding (unittests.parameter_test.PickleParameterTest.test_expanding) ... ok test_expanding_type_error (unittests.parameter_test.PickleParameterTest.test_expanding_type_error) ... ok test_exploration (unittests.parameter_test.PickleParameterTest.test_exploration) ... ok test_get_data (unittests.parameter_test.PickleParameterTest.test_get_data) ... ok test_get_item (unittests.parameter_test.PickleParameterTest.test_get_item) ... ok test_meta_settings (unittests.parameter_test.PickleParameterTest.test_meta_settings) ... ok test_param_accepts_not_unsupported_data (unittests.parameter_test.PickleParameterTest.test_param_accepts_not_unsupported_data) ... ok test_parameter_access_throws_ValueError (unittests.parameter_test.PickleParameterTest.test_parameter_access_throws_ValueError) ... ok test_parameter_locking (unittests.parameter_test.PickleParameterTest.test_parameter_locking) ... ok test_pickling_with_mocking_multiprocessing (unittests.parameter_test.PickleParameterTest.test_pickling_with_mocking_multiprocessing) ... ok test_pickling_without_multiprocessing (unittests.parameter_test.PickleParameterTest.test_pickling_without_multiprocessing) ... ok test_rename (unittests.parameter_test.PickleParameterTest.test_rename) ... ok test_resizing_and_deletion (unittests.parameter_test.PickleParameterTest.test_resizing_and_deletion) ... ok test_storage_and_loading (unittests.parameter_test.PickleParameterTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.parameter_test.PickleParameterTest.test_store_load_with_hdf5) ... ok test_store_load_with_hdf5_no_data (unittests.parameter_test.PickleParameterTest.test_store_load_with_hdf5_no_data) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.parameter_test.PickleParameterTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_type_error_for_exploring_if_range_does_not_match (unittests.parameter_test.PickleParameterTest.test_type_error_for_exploring_if_range_does_not_match) ... ok test_type_error_for_get_item (unittests.parameter_test.PickleParameterTest.test_type_error_for_get_item) ... ok test_type_error_for_not_supported_data (unittests.parameter_test.PickleParameterTest.test_type_error_for_not_supported_data) ... ok test_type_error_for_shrink (unittests.parameter_test.PickleParameterTest.test_type_error_for_shrink) ... ok test_values_of_same_type (unittests.parameter_test.PickleParameterTest.test_values_of_same_type) ... ok test_Attribute_error_for_get_item (unittests.parameter_test.PickleResultTest.test_Attribute_error_for_get_item) ... ok test_contains (unittests.parameter_test.PickleResultTest.test_contains) ... ok test_deletion (unittests.parameter_test.PickleResultTest.test_deletion) ... ok test_deletion_throws_error_if_item_not_there (unittests.parameter_test.PickleResultTest.test_deletion_throws_error_if_item_not_there) ... ok test_dir (unittests.parameter_test.PickleResultTest.test_dir) ... ok test_emptying (unittests.parameter_test.PickleResultTest.test_emptying) ... ok test_f_get_errors (unittests.parameter_test.PickleResultTest.test_f_get_errors) ... ok test_f_get_many_items (unittests.parameter_test.PickleResultTest.test_f_get_many_items) ... ok test_f_to_dict_no_copy (unittests.parameter_test.PickleResultTest.test_f_to_dict_no_copy) ... ok test_get_data (unittests.parameter_test.PickleResultTest.test_get_data) ... ok test_get_item (unittests.parameter_test.PickleResultTest.test_get_item) ... ok test_getattr_and_setattr (unittests.parameter_test.PickleResultTest.test_getattr_and_setattr) ... ok test_iter (unittests.parameter_test.PickleResultTest.test_iter) ... ok test_meta_settings (unittests.parameter_test.PickleResultTest.test_meta_settings) ... ok test_natural_naming (unittests.parameter_test.PickleResultTest.test_natural_naming) ... ok test_pickling (unittests.parameter_test.PickleResultTest.test_pickling) ... ok test_reject_outer_data_structure (unittests.parameter_test.PickleResultTest.test_reject_outer_data_structure) ... ok test_rename (unittests.parameter_test.PickleResultTest.test_rename) ... ok test_set_item_via_number (unittests.parameter_test.PickleResultTest.test_set_item_via_number) ... ok test_set_numbering (unittests.parameter_test.PickleResultTest.test_set_numbering) ... ok test_storage_and_loading (unittests.parameter_test.PickleResultTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.parameter_test.PickleResultTest.test_store_load_with_hdf5) ... ok test_string_representation (unittests.parameter_test.PickleResultTest.test_string_representation) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.parameter_test.PickleResultTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_warning (unittests.parameter_test.PickleResultTest.test_warning) ... ok [====================]100.0%ok [====================]100.0%ok test_progressbar_logging (unittests.utils_test.ProgressBarTest.test_progressbar_logging) ... ok [====================]100.0%ok [====================]100.0%ok test_sort (unittests.utils_test.ResultSortFuncTest.test_sort) ... ok test_sort_with_index (unittests.utils_test.ResultSortFuncTest.test_sort_with_index) ... ok test_expand (pypet.tests.integration.environment_test.ResultSortTest.test_expand) ... ok test_expand_after_reload (pypet.tests.integration.environment_test.ResultSortTest.test_expand_after_reload) ... ok test_f_iter_runs (pypet.tests.integration.environment_test.ResultSortTest.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (pypet.tests.integration.environment_test.ResultSortTest.test_f_iter_runs_auto_load) ... ok test_graceful_exit (pypet.tests.integration.environment_test.ResultSortTest.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2024-11-27 15:46:10,817 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__83834` did NOT complete: `run_00000005, run_00000006, run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (pypet.tests.integration.environment_test.ResultSortTest.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (pypet.tests.integration.environment_test.ResultSortTest.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (pypet.tests.integration.environment_test.ResultSortTest.test_if_results_are_sorted_correctly_using_map) ... ok test_Attribute_error_for_get_item (pypet.tests.unittests.parameter_test.ResultTest.test_Attribute_error_for_get_item) ... ok test_contains (pypet.tests.unittests.parameter_test.ResultTest.test_contains) ... ok test_deletion (pypet.tests.unittests.parameter_test.ResultTest.test_deletion) ... ok test_deletion_throws_error_if_item_not_there (pypet.tests.unittests.parameter_test.ResultTest.test_deletion_throws_error_if_item_not_there) ... ok test_dir (pypet.tests.unittests.parameter_test.ResultTest.test_dir) ... ok test_emptying (pypet.tests.unittests.parameter_test.ResultTest.test_emptying) ... ok test_f_get_errors (pypet.tests.unittests.parameter_test.ResultTest.test_f_get_errors) ... ok test_f_get_many_items (pypet.tests.unittests.parameter_test.ResultTest.test_f_get_many_items) ... ok test_f_to_dict_no_copy (pypet.tests.unittests.parameter_test.ResultTest.test_f_to_dict_no_copy) ... ok test_get_data (pypet.tests.unittests.parameter_test.ResultTest.test_get_data) ... ok test_get_item (pypet.tests.unittests.parameter_test.ResultTest.test_get_item) ... ok test_getattr_and_setattr (pypet.tests.unittests.parameter_test.ResultTest.test_getattr_and_setattr) ... ok test_iter (pypet.tests.unittests.parameter_test.ResultTest.test_iter) ... ok test_meta_settings (pypet.tests.unittests.parameter_test.ResultTest.test_meta_settings) ... ok test_natural_naming (pypet.tests.unittests.parameter_test.ResultTest.test_natural_naming) ... ok test_pickling (pypet.tests.unittests.parameter_test.ResultTest.test_pickling) ... ok test_reject_outer_data_structure (pypet.tests.unittests.parameter_test.ResultTest.test_reject_outer_data_structure) ... ok test_rename (pypet.tests.unittests.parameter_test.ResultTest.test_rename) ... ok test_set_item_via_number (pypet.tests.unittests.parameter_test.ResultTest.test_set_item_via_number) ... ok test_set_numbering (pypet.tests.unittests.parameter_test.ResultTest.test_set_numbering) ... ok test_storage_and_loading (pypet.tests.unittests.parameter_test.ResultTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (pypet.tests.unittests.parameter_test.ResultTest.test_store_load_with_hdf5) ... ok test_string_representation (pypet.tests.unittests.parameter_test.ResultTest.test_string_representation) ... ok test_the_insertion_made_implicetly_in_setUp (pypet.tests.unittests.parameter_test.ResultTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_warning (pypet.tests.unittests.parameter_test.ResultTest.test_warning) ... ok test_fail_after_n_tries (unittests.utils_test.RetryTest.test_fail_after_n_tries) ... I could not execute `RaisesNTypeErrors` with args () and kwargs {}, starting next try. Traceback (most recent call last): File "/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/utils/decorators.py", line 235, in new_func result = func(*args, **kwargs) File "/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/tests/unittests/utils_test.py", line 42, in __call__ raise TypeError('Nope!') TypeError: Nope! ok test_succeeds_after_retries (unittests.utils_test.RetryTest.test_succeeds_after_retries) ... ok test_array_getenum (unittests.shared_data_test.SharedArrayTest.test_array_getenum) ... Failed storing `results.shared_data` Failed storing `results.shared_data` ok test_array_getitem (unittests.shared_data_test.SharedArrayTest.test_array_getitem) ... ok test_array_iter (unittests.shared_data_test.SharedArrayTest.test_array_iter) ... ok test_array_iterrows (unittests.shared_data_test.SharedArrayTest.test_array_iterrows) ... ok test_array_len (unittests.shared_data_test.SharedArrayTest.test_array_len) ... ok test_array_read (unittests.shared_data_test.SharedArrayTest.test_array_read) ... ok test_array_setitem (unittests.shared_data_test.SharedArrayTest.test_array_setitem) ... ok test_table_append (unittests.shared_data_test.SharedTableTest.test_table_append) ... ok test_table_col (unittests.shared_data_test.SharedTableTest.test_table_col) ... ok test_table_flush (unittests.shared_data_test.SharedTableTest.test_table_flush) ... ok test_table_getitem (unittests.shared_data_test.SharedTableTest.test_table_getitem) ... ok test_table_iterrows (unittests.shared_data_test.SharedTableTest.test_table_iterrows) ... ok test_table_read (unittests.shared_data_test.SharedTableTest.test_table_read) ... ok test_table_setitem (unittests.shared_data_test.SharedTableTest.test_table_setitem) ... ok test_table_where (unittests.shared_data_test.SharedTableTest.test_table_where) ... ok test_make_default_file_when_giving_directory_without_slash (integration.environment_test.SimpleEnvironmentTest.test_make_default_file_when_giving_directory_without_slash) ... MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `/tmp/tmp_pypet_tests/trajectory.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. ok test_queue (unittests.trajectory_test.SingleRunQueueTest.test_queue) ... ok test_adding_derived_parameter_and_result (unittests.trajectory_test.SingleRunTest.test_adding_derived_parameter_and_result) ... ok test_auto_prepend (unittests.trajectory_test.SingleRunTest.test_auto_prepend) ... ok test_different_dir (unittests.trajectory_test.SingleRunTest.test_different_dir) ... ok test_if_single_run_can_be_pickled (unittests.trajectory_test.SingleRunTest.test_if_single_run_can_be_pickled) ... ok test_standard_change_param_change (unittests.trajectory_test.SingleRunTest.test_standard_change_param_change) ... ok test_all_slots (unittests.utils_test.SlotsTest.test_all_slots) ... ok test_pickling (unittests.utils_test.SlotsTest.test_pickling) ... ok test_cannot_expand_and_not_explore_throwing_type_error (unittests.parameter_test.SparseParameterTest.test_cannot_expand_and_not_explore_throwing_type_error) ... ok test_equal_values (unittests.parameter_test.SparseParameterTest.test_equal_values) ... ok test_expanding (unittests.parameter_test.SparseParameterTest.test_expanding) ... ok test_expanding_type_error (unittests.parameter_test.SparseParameterTest.test_expanding_type_error) ... ok test_exploration (unittests.parameter_test.SparseParameterTest.test_exploration) ... ok test_get_data (unittests.parameter_test.SparseParameterTest.test_get_data) ... ok test_get_item (unittests.parameter_test.SparseParameterTest.test_get_item) ... ok test_meta_settings (unittests.parameter_test.SparseParameterTest.test_meta_settings) ... ok test_param_accepts_not_unsupported_data (unittests.parameter_test.SparseParameterTest.test_param_accepts_not_unsupported_data) ... ok test_parameter_access_throws_ValueError (unittests.parameter_test.SparseParameterTest.test_parameter_access_throws_ValueError) ... ok test_parameter_locking (unittests.parameter_test.SparseParameterTest.test_parameter_locking) ... ok test_pickling_with_mocking_multiprocessing (unittests.parameter_test.SparseParameterTest.test_pickling_with_mocking_multiprocessing) ... ok test_pickling_without_multiprocessing (unittests.parameter_test.SparseParameterTest.test_pickling_without_multiprocessing) ... ok test_rename (unittests.parameter_test.SparseParameterTest.test_rename) ... ok test_resizing_and_deletion (unittests.parameter_test.SparseParameterTest.test_resizing_and_deletion) ... ok test_storage_and_loading (unittests.parameter_test.SparseParameterTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.parameter_test.SparseParameterTest.test_store_load_with_hdf5) ... ok test_store_load_with_hdf5_no_data (unittests.parameter_test.SparseParameterTest.test_store_load_with_hdf5_no_data) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.parameter_test.SparseParameterTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_type_error_for_exploring_if_range_does_not_match (unittests.parameter_test.SparseParameterTest.test_type_error_for_exploring_if_range_does_not_match) ... ok test_type_error_for_get_item (unittests.parameter_test.SparseParameterTest.test_type_error_for_get_item) ... ok test_type_error_for_not_supported_data (unittests.parameter_test.SparseParameterTest.test_type_error_for_not_supported_data) ... ok test_type_error_for_shrink (unittests.parameter_test.SparseParameterTest.test_type_error_for_shrink) ... ok test_values_of_same_type (unittests.parameter_test.SparseParameterTest.test_values_of_same_type) ... ok test_Attribute_error_for_get_item (unittests.parameter_test.SparseResultTest.test_Attribute_error_for_get_item) ... ok test_contains (unittests.parameter_test.SparseResultTest.test_contains) ... ok test_deletion (unittests.parameter_test.SparseResultTest.test_deletion) ... ok test_deletion_throws_error_if_item_not_there (unittests.parameter_test.SparseResultTest.test_deletion_throws_error_if_item_not_there) ... ok test_dir (unittests.parameter_test.SparseResultTest.test_dir) ... ok test_emptying (unittests.parameter_test.SparseResultTest.test_emptying) ... ok test_f_get_errors (unittests.parameter_test.SparseResultTest.test_f_get_errors) ... ok test_f_get_many_items (unittests.parameter_test.SparseResultTest.test_f_get_many_items) ... ok test_f_to_dict_no_copy (unittests.parameter_test.SparseResultTest.test_f_to_dict_no_copy) ... ok test_get_data (unittests.parameter_test.SparseResultTest.test_get_data) ... ok test_get_item (unittests.parameter_test.SparseResultTest.test_get_item) ... ok test_getattr_and_setattr (unittests.parameter_test.SparseResultTest.test_getattr_and_setattr) ... ok test_illegal_naming (unittests.parameter_test.SparseResultTest.test_illegal_naming) ... ok test_iter (unittests.parameter_test.SparseResultTest.test_iter) ... ok test_meta_settings (unittests.parameter_test.SparseResultTest.test_meta_settings) ... ok test_natural_naming (unittests.parameter_test.SparseResultTest.test_natural_naming) ... ok test_pickling (unittests.parameter_test.SparseResultTest.test_pickling) ... ok test_reject_outer_data_structure (unittests.parameter_test.SparseResultTest.test_reject_outer_data_structure) ... ok test_rename (unittests.parameter_test.SparseResultTest.test_rename) ... ok test_set_item_via_number (unittests.parameter_test.SparseResultTest.test_set_item_via_number) ... ok test_set_numbering (unittests.parameter_test.SparseResultTest.test_set_numbering) ... ok test_storage_and_loading (unittests.parameter_test.SparseResultTest.test_storage_and_loading) ... ok test_store_load_with_hdf5 (unittests.parameter_test.SparseResultTest.test_store_load_with_hdf5) ... ok test_string_representation (unittests.parameter_test.SparseResultTest.test_string_representation) ... ok test_the_insertion_made_implicetly_in_setUp (unittests.parameter_test.SparseResultTest.test_the_insertion_made_implicetly_in_setUp) ... ok test_warning (unittests.parameter_test.SparseResultTest.test_warning) ... ok test_giant_matrices (integration.shared_data_test.StorageDataEnvironmentTest.test_giant_matrices) ... ok test_loading_run (integration.shared_data_test.StorageDataEnvironmentTest.test_loading_run) ... ok test_run (integration.shared_data_test.StorageDataEnvironmentTest.test_run) ... ok test_run_large (integration.shared_data_test.StorageDataEnvironmentTest.test_run_large) ... ok test_all_arrays (unittests.shared_data_test.StorageDataTrajectoryTests.test_all_arrays) ... ok test_compacting (unittests.shared_data_test.StorageDataTrajectoryTests.test_compacting) ... +=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=+ Recursive copy: True Applying filters: Filters(complevel=9, complib='zlib', shuffle=True, bitshuffle=False, fletcher32=False, least_significant_digit=None) Start copying /tmp/tmp_pypet_tests/hdf5compacting.hdf5:/ to /tmp/tmp_pypet_tests/hdf5compacting_tmp.hdf5:/ +=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=++=+ Groups copied: 23 , Leaves copied: 26 , Links copied: 0 , Hard links copied: 0 User attrs copied KBytes copied: 95.625 Time copying: 0.093 s (real) 0.092 s (cpu) 99% Copied nodes/sec: 525.6 Copied KB/s : 1026 ok test_conversions (unittests.shared_data_test.StorageDataTrajectoryTests.test_conversions) ... ok test_df (unittests.shared_data_test.StorageDataTrajectoryTests.test_df) ... ok test_errors (unittests.shared_data_test.StorageDataTrajectoryTests.test_errors) ... ok test_storing_and_manipulating (unittests.shared_data_test.StorageDataTrajectoryTests.test_storing_and_manipulating) ... ok test_auto_load (unittests.storage_test.StorageTest.test_auto_load) ... Failed loading `Trajectory Testautoload_2024_11_27_15h46m33s (len:1): (config: ), (derived_parameters: ), (results: )` Error while auto-loading `kdsfdsf` under ``. ok test_delete_links (unittests.storage_test.StorageTest.test_delete_links) ... ok test_delete_whole_subtrees (unittests.storage_test.StorageTest.test_delete_whole_subtrees) ... Failed storing `ResultGroup results.mytest.yourtest: (test: )` Failed storing `[('DELETE', )>, (), {})]` Could not remove `[('DELETE', )>, (), {})]` from the trajectory. Maybe the item(s) was/were never stored to disk. ok test_fail_on_wrong_kwarg (unittests.storage_test.StorageTest.test_fail_on_wrong_kwarg) ... ok test_file_size_many_params (unittests.storage_test.StorageTest.test_file_size_many_params) ... ok test_get_default (unittests.storage_test.StorageTest.test_get_default) ... Failed loading `Trajectory Testgetdefault_2024_11_27_15h46m39s (len:1): (config: ), (results: )` Error while auto-loading `results.I.am.run_ALL.a.mean.answ` under ``. Failed loading `Trajectory Testgetdefault_2024_11_27_15h46m39s (len:1): (config: ), (results: )` Error while auto-loading `kdsfdsf` under ``. ok test_hdf5_settings_and_context (unittests.storage_test.StorageTest.test_hdf5_settings_and_context) ... ok test_loading_and_storing_empty_containers (unittests.storage_test.StorageTest.test_loading_and_storing_empty_containers) ... ok test_loading_as_new (unittests.storage_test.StorageTest.test_loading_as_new) ... ok test_loading_explored_parameters (unittests.storage_test.StorageTest.test_loading_explored_parameters) ... ok test_max_depth_loading_and_storing (unittests.storage_test.StorageTest.test_max_depth_loading_and_storing) ... ok test_maximum_overview_size (unittests.storage_test.StorageTest.test_maximum_overview_size) ... ok test_migrations (unittests.storage_test.StorageTest.test_migrations) ... ok test_new_assignment_method (unittests.storage_test.StorageTest.test_new_assignment_method) ... Failed adding `jj` under `parameters`. Failed adding `jj` under `results`. Failed adding `jj` under `config`. Failed adding `jj` under `derived_parameters`. Failed adding `jj` under `parameters`. Failed adding `jj` under `derived_parameters`. Failed adding `jj` under `config`. Failed adding `jj` under ``. Failed adding `jj` under `parameters`. Failed adding `jj` under `derived_parameters`. Failed adding `jj` under `results`. Failed adding `jj` under ``. Failed adding `jj` under `parameters`. Failed adding `jj` under `config`. Failed adding `jj` under `results`. Failed adding `jj` under ``. Failed adding `jj` under `derived_parameters`. Failed adding `jj` under `results`. Failed adding `jj` under `config`. Failed adding `jj` under ``. ok test_no_run_information_loading (unittests.storage_test.StorageTest.test_no_run_information_loading) ... ok test_overwrite_annotations_and_results (unittests.storage_test.StorageTest.test_overwrite_annotations_and_results) ... ok test_overwrite_stuff (unittests.storage_test.StorageTest.test_overwrite_stuff) ... Cannot overwrite `{'b'}`, these items are not supposed to be stored by the leaf node. ok test_partial_loading (unittests.storage_test.StorageTest.test_partial_loading) ... You marked {'x'} for load only, but I cannot find these for `results.mytest.test` You marked `{'d'}` for not loading, but these were not part of `results.mytest.test` anyway. Failed loading `Result results.mytest.test: a='b'` Failed loading `[('LEAF', , (), {'load_except': ['x'], 'load_only': ['y']})]` ok test_partially_delete_stuff (unittests.storage_test.StorageTest.test_partially_delete_stuff) ... ok test_removal_of_error_parameter (unittests.storage_test.StorageTest.test_removal_of_error_parameter) ... Failed storing leaf `results.j.j.josie`. I will remove the hdf5 data I added again. Failed storing `Trajectory traj_2024_11_27_15h46m48s (len:1): (config: ), (results: )` Failed storing leaf `results.j.j.josie2`. I will remove the hdf5 data I added again. Failed storing `Trajectory traj_2024_11_27_15h46m48s (len:1): (config: ), (results: )` ok test_shortenings_of_names (unittests.storage_test.StorageTest.test_shortenings_of_names) ... ok test_storage_service_errors (unittests.storage_test.StorageTest.test_storage_service_errors) ... Failed storing `test_storage_service_errors (unittests.storage_test.StorageTest.test_storage_service_errors)` Failed storing `test_storage_service_errors (unittests.storage_test.StorageTest.test_storage_service_errors)` Failed storing `test_storage_service_errors (unittests.storage_test.StorageTest.test_storage_service_errors)` Failed loading `Trajectory my_trajectory_2024_11_27_15h46m48s (len:1): (config: )` Failed storing `[('LEAF', None, None, None, None)]` Failed loading `Trajectory my_trajectory_2024_11_27_15h46m48s (len:1): (config: )` Failed loading `Trajectory my_trajectory_2024_11_27_15h46m48s (len:1): (config: )` ok test_store_and_load_large_dictionary (unittests.storage_test.StorageTest.test_store_and_load_large_dictionary) ... ok test_store_items_and_groups (unittests.storage_test.StorageTest.test_store_items_and_groups) ... ok test_store_overly_long_comment (unittests.storage_test.StorageTest.test_store_overly_long_comment) ... ok test_storing_and_loading_groups (unittests.storage_test.StorageTest.test_storing_and_loading_groups) ... ok test_version_mismatch (unittests.storage_test.StorageTest.test_version_mismatch) ... Failed loading `Trajectory TestVERSION_2024_11_27_15h46m49s (len:1): (config: )` Current pypet version is 0.6.1 with python 3.13.0 but your trajectory was created with version 0.1a.1 under python 3.13.0. Yet, you enforced the load, so I will handle the trajectory despite the version mismatch. ok test_wildcard_search (unittests.storage_test.StorageTest.test_wildcard_search) ... ok test_if_all_is_complete (unittests.brian2tests.module_test.TestAllBrian2Import.test_if_all_is_complete) ... ok test_import_star (unittests.brian2tests.module_test.TestAllBrian2Import.test_import_star) ... ok test_if_all_is_complete (unittests.module_test.TestAllImport.test_if_all_is_complete) ... ok test_import_star (unittests.module_test.TestAllImport.test_import_star) ... ok test_consecutive_merges (integration.merge_test.TestConsecutiveMerges.test_consecutive_merges) ... MainProcess 2024-11-27 15:47:10,310 root ERROR R and Alpha of consecutive merge test (-0.785806629293348, 1.894736452351598e-09) ok test_merge_all_in_folder (integration.merge_test.TestConsecutiveMerges.test_merge_all_in_folder) ... ok test_merge_many (integration.merge_test.TestConsecutiveMerges.test_merge_many) ... ok test_flatten_dictionary (unittests.utils_test.TestDictionaryMethods.test_flatten_dictionary) ... ok test_nest_dicitionary (unittests.utils_test.TestDictionaryMethods.test_nest_dicitionary) ... ok test_nested_equal (unittests.utils_test.TestEqualityOperations.test_nested_equal) ... ok test_find_unique (unittests.utils_test.TestFindUnique.test_find_unique) ... Your parameter entries could not be hashed, now I am sorting slowly in O(N**2). Your parameter entries could not be hashed, now I am sorting slowly in O(N**2). ok test_iter (unittests.utils_test.TestIteratorChain.test_iter) ... ok test_next (unittests.utils_test.TestIteratorChain.test_next) ... ok test_pipeline (integration.pipeline_test.TestMPImmediatePostProcLocal.test_pipeline) ... Executing command `ptrepack -v --complib zlib --complevel 9 --shuffle 1 --fletcher32 0 /tmp/tmp_pypet_tests/hdf5compacting.hdf5 /tmp/tmp_pypet_tests/hdf5compacting_tmp.hdf5` #### Compacting successful #### Renaming files ### Compacting and Renaming finished #### ok test_pipeline_with_iter_args (integration.pipeline_test.TestMPImmediatePostProcLocal.test_pipeline_with_iter_args) ... ok test_postprocessing (integration.pipeline_test.TestMPImmediatePostProcLocal.test_postprocessing) ... ok test_postprocessing_iter_args (integration.pipeline_test.TestMPImmediatePostProcLocal.test_postprocessing_iter_args) ... ok test_pipeline (integration.pipeline_test.TestMPImmediatePostProcLock.test_pipeline) ... ok test_pipeline_with_iter_args (integration.pipeline_test.TestMPImmediatePostProcLock.test_pipeline_with_iter_args) ... ok test_postprocessing (integration.pipeline_test.TestMPImmediatePostProcLock.test_postprocessing) ... ok test_postprocessing_iter_args (integration.pipeline_test.TestMPImmediatePostProcLock.test_postprocessing_iter_args) ... ok test_pipeline (integration.pipeline_test.TestMPImmediatePostProcPipe.test_pipeline) ... ok test_pipeline_with_iter_args (integration.pipeline_test.TestMPImmediatePostProcPipe.test_pipeline_with_iter_args) ... ok test_postprocessing (integration.pipeline_test.TestMPImmediatePostProcPipe.test_postprocessing) ... ok test_postprocessing_iter_args (integration.pipeline_test.TestMPImmediatePostProcPipe.test_postprocessing_iter_args) ... ok test_pipeline (integration.pipeline_test.TestMPImmediatePostProcQueue.test_pipeline) ... ok test_pipeline_with_iter_args (integration.pipeline_test.TestMPImmediatePostProcQueue.test_pipeline_with_iter_args) ... ok test_postprocessing (integration.pipeline_test.TestMPImmediatePostProcQueue.test_postprocessing) ... ok test_postprocessing_iter_args (integration.pipeline_test.TestMPImmediatePostProcQueue.test_postprocessing_iter_args) ... ok test_pipeline (integration.pipeline_test.TestMPPostProc.test_pipeline) ... ok test_pipeline_with_iter_args (integration.pipeline_test.TestMPPostProc.test_pipeline_with_iter_args) ... ok test_postprocessing (integration.pipeline_test.TestMPPostProc.test_postprocessing) ... ok test_postprocessing_iter_args (integration.pipeline_test.TestMPPostProc.test_postprocessing_iter_args) ... ok test_expand (integration.merge_test.TestMergeResultsSort.test_expand) ... ok test_expand_after_reload (integration.merge_test.TestMergeResultsSort.test_expand_after_reload) ... ok test_f_iter_runs (integration.merge_test.TestMergeResultsSort.test_f_iter_runs) ... ok test_f_iter_runs_auto_load (integration.merge_test.TestMergeResultsSort.test_f_iter_runs_auto_load) ... ok test_graceful_exit (integration.merge_test.TestMergeResultsSort.test_graceful_exit) ... You killed the process(es) via `SIGINT` (`CTRL+C`). I am trying to exit gracefully. Using `SIGINT` (`CTRL+C`) again will cause an immediate exit. MainProcess 2024-11-27 15:47:48,911 pypet.environment.Environment ERROR Following runs of trajectory `T__test_graceful_exit__49714` did NOT complete: `run_00000005, run_00000006, run_00000007, run_00000008, run_00000009, run_00000010, run_00000011, run_00000012, run_00000013, run_00000014, run_00000015, run_00000016, run_00000017, run_00000018, run_00000019, run_00000020, run_00000021, run_00000022, run_00000023, run_00000024, run_00000025, run_00000026, run_00000027, run_00000028, run_00000029, run_00000030, run_00000031, run_00000032, run_00000033, run_00000034, run_00000035, run_00000036, run_00000037, run_00000038, run_00000039, run_00000040, run_00000041, run_00000042, run_00000043, run_00000044, run_00000045, run_00000046, run_00000047, run_00000048` ok test_if_results_are_sorted_correctly (integration.merge_test.TestMergeResultsSort.test_if_results_are_sorted_correctly) ... ok test_if_results_are_sorted_correctly_manual_runs (integration.merge_test.TestMergeResultsSort.test_if_results_are_sorted_correctly_manual_runs) ... ok test_if_results_are_sorted_correctly_using_map (integration.merge_test.TestMergeResultsSort.test_if_results_are_sorted_correctly_using_map) ... ok test_merge_normally (integration.merge_test.TestMergeResultsSort.test_merge_normally) ... ok test_merge_remove_duplicates (integration.merge_test.TestMergeResultsSort.test_merge_remove_duplicates) ... ok test_concurrent_pool (unittests.mpwrappers_test.TestNetLock.test_concurrent_pool) ... skipped 'Cannot be run without zmq' test_concurrent_pool_faulty (unittests.mpwrappers_test.TestNetLock.test_concurrent_pool_faulty) ... skipped 'Cannot be run without zmq' test_concurrent_scoop (unittests.mpwrappers_test.TestNetLock.test_concurrent_scoop) ... skipped 'Cannot be run without zmq' test_errors (unittests.mpwrappers_test.TestNetLock.test_errors) ... skipped 'Cannot be run without zmq' test_single_core (unittests.mpwrappers_test.TestNetLock.test_single_core) ... skipped 'Cannot be run without zmq' test_timout_pool (unittests.mpwrappers_test.TestNetLock.test_timout_pool) ... skipped 'Cannot be run without zmq' test_NOT_purge_duplicate_comments (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_NOT_purge_duplicate_comments) ... ok test_a_large_run (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_a_large_run) ... ok test_errors (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_errors) ... ok test_expand (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_expand) ... ok test_expand_after_reload (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_expand_after_reload) ... ok test_file_overwriting (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_file_overwriting) ... ok test_just_one_run (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_just_one_run) ... ok test_niceness (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_niceness) ... ok test_purge_duplicate_comments (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_purge_duplicate_comments) ... MainProcess 2024-11-27 15:48:00,067 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__74410_2024_11_27_15h48m00s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_run) ... ok test_run_complex (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_run_complex) ... ok test_store_form_tuple (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_store_form_tuple) ... ok test_store_single_group (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_store_single_group) ... MainProcess 2024-11-27 15:48:03,644 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_switch_off_all_tables) ... ok test_switch_on_all_comments (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_switch_on_all_comments) ... ok test_time_display_of_loading (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_time_display_of_loading) ... ok test_two_runs (pypet.tests.integration.environment_test.TestOtherHDF5Settings2.test_two_runs) ... ok test_NOT_purge_duplicate_comments (integration.environment_test.TestOtherHDF5Settings.test_NOT_purge_duplicate_comments) ... ok test_a_large_run (integration.environment_test.TestOtherHDF5Settings.test_a_large_run) ... ok test_errors (integration.environment_test.TestOtherHDF5Settings.test_errors) ... ok test_expand (integration.environment_test.TestOtherHDF5Settings.test_expand) ... ok test_expand_after_reload (integration.environment_test.TestOtherHDF5Settings.test_expand_after_reload) ... ok test_file_overwriting (integration.environment_test.TestOtherHDF5Settings.test_file_overwriting) ... ok test_just_one_run (integration.environment_test.TestOtherHDF5Settings.test_just_one_run) ... ok test_niceness (integration.environment_test.TestOtherHDF5Settings.test_niceness) ... ok test_purge_duplicate_comments (integration.environment_test.TestOtherHDF5Settings.test_purge_duplicate_comments) ... MainProcess 2024-11-27 15:48:19,037 pypet.storageservice.HDF5StorageService ERROR Failed storing `Trajectory T__test_purge_duplicate_comments__65787_2024_11_27_15h48m19s (len:4): (config: ), (parameters: ), (derived_parameters: ), (results: ), (testleaf0: ), (testleaf1: ), ...` ok test_run (integration.environment_test.TestOtherHDF5Settings.test_run) ... ok test_run_complex (integration.environment_test.TestOtherHDF5Settings.test_run_complex) ... ok test_store_form_tuple (integration.environment_test.TestOtherHDF5Settings.test_store_form_tuple) ... ok test_store_single_group (integration.environment_test.TestOtherHDF5Settings.test_store_single_group) ... MainProcess 2024-11-27 15:48:22,444 pypet.storageservice.HDF5StorageService ERROR Failed loading `ParameterGroup parameters: (Normal: ), (Numpy: ), (Sparse: ), (Numpy_2D: ), (Numpy_3D: ), (Tuples: ), ...` ok test_switch_ON_large_tables (integration.environment_test.TestOtherHDF5Settings.test_switch_ON_large_tables) ... ok test_switch_off_all_tables (integration.environment_test.TestOtherHDF5Settings.test_switch_off_all_tables) ... ok test_switch_on_all_comments (integration.environment_test.TestOtherHDF5Settings.test_switch_on_all_comments) ... ok test_time_display_of_loading (integration.environment_test.TestOtherHDF5Settings.test_time_display_of_loading) ... ok test_two_runs (integration.environment_test.TestOtherHDF5Settings.test_two_runs) ... ok test_pipeline (integration.pipeline_test.TestPostProc.test_pipeline) ... ok test_pipeline_with_iter_args (integration.pipeline_test.TestPostProc.test_pipeline_with_iter_args) ... ok test_postprocessing (integration.pipeline_test.TestPostProc.test_postprocessing) ... ok test_postprocessing_iter_args (integration.pipeline_test.TestPostProc.test_postprocessing_iter_args) ... ok test_run_one_test (unittests.module_test.TestRunningTests.test_run_one_test) ... test_import_star (unittests.module_test.TestAllImport.test_import_star) ... ok ---------------------------------------------------------------------- Ran 1 test in 0.001s OK ok test_copy_custom_parameter (unittests.trajectory_test.TrajectoryCopyTreeTest.test_copy_custom_parameter) ... ok test_copy_explored (unittests.trajectory_test.TrajectoryCopyTreeTest.test_copy_explored) ... ok test_copy_links (unittests.trajectory_test.TrajectoryCopyTreeTest.test_copy_links) ... ok test_copy_tree_annotations (unittests.trajectory_test.TrajectoryCopyTreeTest.test_copy_tree_annotations) ... ok test_copy_tree_simple (unittests.trajectory_test.TrajectoryCopyTreeTest.test_copy_tree_simple) ... ok test_not_copy_from_node (unittests.trajectory_test.TrajectoryCopyTreeTest.test_not_copy_from_node) ... ok test_not_copy_leaves (unittests.trajectory_test.TrajectoryCopyTreeTest.test_not_copy_leaves) ... ok test_overwrite (unittests.trajectory_test.TrajectoryCopyTreeTest.test_overwrite) ... ok test_overwrite_leaves (unittests.trajectory_test.TrajectoryCopyTreeTest.test_overwrite_leaves) ... ok test_shallow_copy (unittests.trajectory_test.TrajectoryCopyTreeTest.test_shallow_copy) ... ok test_shallow_copy_not_full_copy (unittests.trajectory_test.TrajectoryCopyTreeTest.test_shallow_copy_not_full_copy) ... ok test_complex_find_statement (unittests.trajectory_test.TrajectoryFindTest.test_complex_find_statement) ... ok test_find_nothing (unittests.trajectory_test.TrajectoryFindTest.test_find_nothing) ... ok test_simple_find_idx (unittests.trajectory_test.TrajectoryFindTest.test_simple_find_idx) ... ok test_attribute_error_raises_when_leaf_and_group_with_same_name_are_added (unittests.trajectory_test.TrajectoryTest.test_attribute_error_raises_when_leaf_and_group_with_same_name_are_added) ... Failed adding `param2` under ``. Failed adding `test` under ``. ok test_change_properties_with_environment (unittests.trajectory_test.TrajectoryTest.test_change_properties_with_environment) ... ok test_changing (unittests.trajectory_test.TrajectoryTest.test_changing) ... ok test_changing_of_result (unittests.trajectory_test.TrajectoryTest.test_changing_of_result) ... ok test_contains_item_identity (unittests.trajectory_test.TrajectoryTest.test_contains_item_identity) ... ok test_data_dir (unittests.trajectory_test.TrajectoryTest.test_data_dir) ... ok test_debug (unittests.trajectory_test.TrajectoryTest.test_debug) ... ok test_deletion (unittests.trajectory_test.TrajectoryTest.test_deletion) ... ok test_deletion_during_run (unittests.trajectory_test.TrajectoryTest.test_deletion_during_run) ... ok test_dir (unittests.trajectory_test.TrajectoryTest.test_dir) ... ok test_dynamic_class_loading (unittests.trajectory_test.TrajectoryTest.test_dynamic_class_loading) ... ok test_f_get (unittests.trajectory_test.TrajectoryTest.test_f_get) ... ok test_f_get_run_information (unittests.trajectory_test.TrajectoryTest.test_f_get_run_information) ... ok test_f_getting_of_children (unittests.trajectory_test.TrajectoryTest.test_f_getting_of_children) ... ok test_f_is_completed (unittests.trajectory_test.TrajectoryTest.test_f_is_completed) ... ok test_find_in_all_runs (unittests.trajectory_test.TrajectoryTest.test_find_in_all_runs) ... ok test_find_in_all_runs_with_groups (unittests.trajectory_test.TrajectoryTest.test_find_in_all_runs_with_groups) ... ok test_get_all (unittests.trajectory_test.TrajectoryTest.test_get_all) ... ok test_get_children (unittests.trajectory_test.TrajectoryTest.test_get_children) ... ok test_get_data_dictionaries_directly (unittests.trajectory_test.TrajectoryTest.test_get_data_dictionaries_directly) ... ok test_get_item (unittests.trajectory_test.TrajectoryTest.test_get_item) ... ok test_if_picklable (unittests.trajectory_test.TrajectoryTest.test_if_picklable) ... ok test_illegal_namings (unittests.trajectory_test.TrajectoryTest.test_illegal_namings) ... ok test_iter_bfs (unittests.trajectory_test.TrajectoryTest.test_iter_bfs) ... ok test_iter_bfs_as_run (unittests.trajectory_test.TrajectoryTest.test_iter_bfs_as_run) ... ok test_iter_leaves (unittests.trajectory_test.TrajectoryTest.test_iter_leaves) ... ok test_kids (unittests.trajectory_test.TrajectoryTest.test_kids) ... ok test_lazy_setitem (unittests.trajectory_test.TrajectoryTest.test_lazy_setitem) ... ok test_max_depth (unittests.trajectory_test.TrajectoryTest.test_max_depth) ... ok test_mutual_exclusive_kwargs (unittests.trajectory_test.TrajectoryTest.test_mutual_exclusive_kwargs) ... ok test_new_grouping (unittests.trajectory_test.TrajectoryTest.test_new_grouping) ... ok test_no_clobber (unittests.trajectory_test.TrajectoryTest.test_no_clobber) ... MainProcess 2024-11-27 15:48:35,539 pypet.naturalnaming.NaturalNamingInterface ERROR Failed adding `test2` under ``. MainProcess 2024-11-27 15:48:35,539 pypet.naturalnaming.NaturalNamingInterface ERROR Failed adding `test` under ``. ok test_no_prefixes (unittests.trajectory_test.TrajectoryTest.test_no_prefixes) ... ok test_not_adding_pars_during_single_run (unittests.trajectory_test.TrajectoryTest.test_not_adding_pars_during_single_run) ... ok test_not_increase_exploration (unittests.trajectory_test.TrajectoryTest.test_not_increase_exploration) ... ok test_not_unique_search (unittests.trajectory_test.TrajectoryTest.test_not_unique_search) ... ok test_prefixes_dir (unittests.trajectory_test.TrajectoryTest.test_prefixes_dir) ... ok test_re_raise_old_wildcard_error (unittests.trajectory_test.TrajectoryTest.test_re_raise_old_wildcard_error) ... ok test_remove (unittests.trajectory_test.TrajectoryTest.test_remove) ... ok test_remove_of_all_type (unittests.trajectory_test.TrajectoryTest.test_remove_of_all_type) ... ok test_remove_of_explored_stuff_if_not_saved (unittests.trajectory_test.TrajectoryTest.test_remove_of_explored_stuff_if_not_saved) ... ok test_remove_of_explored_stuff_if_saved (unittests.trajectory_test.TrajectoryTest.test_remove_of_explored_stuff_if_saved) ... ok test_root_getting (unittests.trajectory_test.TrajectoryTest.test_root_getting) ... ok test_short_cuts (unittests.trajectory_test.TrajectoryTest.test_short_cuts) ... ok test_short_names_and_nested_failure (unittests.trajectory_test.TrajectoryTest.test_short_names_and_nested_failure) ... ok test_short_names_to_dict_failure (unittests.trajectory_test.TrajectoryTest.test_short_names_to_dict_failure) ... ok test_shrink (unittests.trajectory_test.TrajectoryTest.test_shrink) ... ok test_standard_change_param_change (unittests.trajectory_test.TrajectoryTest.test_standard_change_param_change) ... ok test_to_nested_dict (unittests.trajectory_test.TrajectoryTest.test_to_nested_dict) ... ok test_to_nested_dict_intermediate_node (unittests.trajectory_test.TrajectoryTest.test_to_nested_dict_intermediate_node) ... ok test_to_nested_dict_intermediate_node2 (unittests.trajectory_test.TrajectoryTest.test_to_nested_dict_intermediate_node2) ... ok test_truncation_of_string_statements_of_group_nodes (unittests.trajectory_test.TrajectoryTest.test_truncation_of_string_statements_of_group_nodes) ... ok ---------------------------------------------------------------------- Ran 923 tests in 488.952s OK (skipped=122) + pushd pypet/tests ~/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/pypet/tests ~/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/python3 all_examples.py IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_01.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/12 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/12 runs [= ] 8.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #1 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/12 runs [=== ] 16.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #2 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #2 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 3/12 runs [===== ] 25.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #3 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #3 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 4/12 runs [====== ] 33.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #4 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #4 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 5/12 runs [======== ] 41.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #5 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #5 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 6/12 runs [========== ] 50.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #6 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #6 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 7/12 runs [=========== ] 58.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #7 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #7 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 8/12 runs [============= ] 66.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #8 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #8 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 9/12 runs [=============== ] 75.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #9 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #9 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 10/12 runs [================ ] 83.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #10 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #10 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 11/12 runs [================== ] 91.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #11 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #11 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 12/12 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Multiplication` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Multiplication` were completed successfully. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_01.hdf5`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `2`. IMPORTED MATPLOTLIB WITH AGG The result of `run_00000001` is: 7 IMPORTED MATPLOTLIB WITH AGG The full name of the new Skywalker Parameter is parameters.starwars.characters.luke_skywalker Damn it, there are two characters groups in the trajectory: NotUniqueNodeError('Node `characters` has been found more than once within the same depth 3. Full name of first occurrence is `parameters.starwars.characters` and of second `parameters.spaceballs.characters`') The name of the actor playing Luke is Mark Hamill. The object found for luke_skywalker is `Parameter parameters.starwars.characters.luke_skywalker (`May the force be with you!`): 'Mark Hamill'`. Help me Obiwan! Nothing there! George Lucas earned 111566834666.53162$$$! MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_03.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_03.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Traj1_2024_11_27_15h48m38s`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Traj1_2024_11_27_15h48m38s`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Traj1_2024_11_27_15h48m38s`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/12 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/12 runs [= ] 8.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #1 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/12 runs [=== ] 16.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #2 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #2 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 3/12 runs [===== ] 25.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #3 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #3 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 4/12 runs [====== ] 33.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #4 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #4 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 5/12 runs [======== ] 41.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #5 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #5 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 6/12 runs [========== ] 50.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #6 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #6 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 7/12 runs [=========== ] 58.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #7 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #7 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 8/12 runs [============= ] 66.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #8 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #8 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 9/12 runs [=============== ] 75.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #9 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #9 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 10/12 runs [================ ] 83.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #10 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #10 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 11/12 runs [================== ] 91.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #11 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #11 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 12/12 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Traj1_2024_11_27_15h48m38s`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Traj1_2024_11_27_15h48m38s`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Traj1_2024_11_27_15h48m38s`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Traj1_2024_11_27_15h48m38s` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Traj1_2024_11_27_15h48m38s`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Traj1_2024_11_27_15h48m38s`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Traj1_2024_11_27_15h48m38s`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Traj1_2024_11_27_15h48m38s` were completed successfully. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Traj2_2024_11_27_15h48m38s`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Traj2_2024_11_27_15h48m38s`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Traj2_2024_11_27_15h48m38s`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/12 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/12 runs [= ] 8.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #1 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/12 runs [=== ] 16.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #2 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #2 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 3/12 runs [===== ] 25.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #3 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #3 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 4/12 runs [====== ] 33.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #4 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #4 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 5/12 runs [======== ] 41.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #5 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #5 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 6/12 runs [========== ] 50.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #6 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #6 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 7/12 runs [=========== ] 58.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #7 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #7 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 8/12 runs [============= ] 66.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #8 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #8 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 9/12 runs [=============== ] 75.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #9 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #9 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 10/12 runs [================ ] 83.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #10 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #10 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 11/12 runs [================== ] 91.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #11 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #11 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 12/12 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Traj2_2024_11_27_15h48m38s`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Traj2_2024_11_27_15h48m38s`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Traj2_2024_11_27_15h48m38s`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Traj2_2024_11_27_15h48m38s` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Traj2_2024_11_27_15h48m38s`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Traj2_2024_11_27_15h48m38s`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Traj2_2024_11_27_15h48m38s`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Traj2_2024_11_27_15h48m38s` were completed successfully. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Traj1_2024_11_27_15h48m38s`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Traj2_2024_11_27_15h48m38s`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing backup of Traj2_2024_11_27_15h48m38s. MainProcess pypet.storageservice.HDF5StorageService INFO Finished backup of Traj2_2024_11_27_15h48m38s. MainProcess pypet.storageservice.HDF5StorageService INFO Storing backup of Traj1_2024_11_27_15h48m38s. MainProcess pypet.storageservice.HDF5StorageService INFO Finished backup of Traj1_2024_11_27_15h48m38s. MainProcess pypet.trajectory.Trajectory INFO Merging the parameters MainProcess pypet.trajectory.Trajectory INFO Merging run information MainProcess pypet.trajectory.Trajectory INFO Merging derived parameters MainProcess pypet.trajectory.Trajectory INFO Start copying results and single run derived parameters MainProcess pypet.trajectory.Trajectory INFO Updating Trajectory information and changed parameters in storage MainProcess pypet.trajectory.Trajectory INFO Merging config! MainProcess pypet.trajectory.Trajectory INFO Merging environment config! MainProcess pypet.trajectory.Trajectory INFO Merging config successful! MainProcess pypet.trajectory.Trajectory INFO Adding merge information MainProcess pypet.trajectory.Trajectory INFO Writing merged data to disk MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Traj1_2024_11_27_15h48m38s`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `results`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `derived_parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Traj1_2024_11_27_15h48m38s`. MainProcess pypet.trajectory.Trajectory INFO Finished Merging! MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Traj1_2024_11_27_15h48m38s`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `derived_parameters` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `2`. IMPORTED MATPLOTLIB WITH AGG run_00000000: x=1.000000, y=6.000000, z=6.000000 run_00000001: x=1.000000, y=7.000000, z=7.000000 run_00000002: x=1.000000, y=8.000000, z=8.000000 run_00000003: x=2.000000, y=6.000000, z=12.000000 run_00000004: x=2.000000, y=7.000000, z=14.000000 run_00000005: x=2.000000, y=8.000000, z=16.000000 run_00000006: x=3.000000, y=6.000000, z=18.000000 run_00000007: x=3.000000, y=7.000000, z=21.000000 run_00000008: x=3.000000, y=8.000000, z=24.000000 run_00000009: x=4.000000, y=6.000000, z=24.000000 run_00000010: x=4.000000, y=7.000000, z=28.000000 run_00000011: x=4.000000, y=8.000000, z=32.000000 run_00000012: x=3.000000, y=9.000000, z=27.000000 run_00000013: x=4.000000, y=9.000000, z=36.000000 run_00000014: x=5.000000, y=7.000000, z=35.000000 run_00000015: x=5.000000, y=8.000000, z=40.000000 run_00000016: x=5.000000, y=9.000000, z=45.000000 run_00000017: x=6.000000, y=7.000000, z=42.000000 run_00000018: x=6.000000, y=8.000000, z=48.000000 run_00000019: x=6.000000, y=9.000000, z=54.000000 MainProcess STDOUT INFO Established redirection of `stdout`. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_04.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_04_MP`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_04_MP`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Example_04_MP`. ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_04_MP`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_04_MP`. MainProcess pypet.environment.MultiprocContext INFO Starting the Storage Queue! MainProcess pypet.environment.Environment INFO Starting Pool with 4 processes MainProcess pypet.environment.Environment INFO Freezing pool input MainProcess pypet INFO PROGRESS: Finished 0/400 runs [ ] 0.0% MainProcess pypet INFO PROGRESS: Finished 20/400 runs [= ] 5.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 40/400 runs [== ] 10.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 60/400 runs [=== ] 15.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 80/400 runs [==== ] 20.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 100/400 runs [===== ] 25.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 120/400 runs [====== ] 30.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 140/400 runs [======= ] 35.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 160/400 runs [======== ] 40.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 180/400 runs [========= ] 45.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 200/400 runs [========== ] 50.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 220/400 runs [=========== ] 55.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 240/400 runs [============ ] 60.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 260/400 runs [============= ] 65.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 280/400 runs [============== ] 70.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 300/400 runs [=============== ] 75.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 320/400 runs [================ ] 80.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 340/400 runs [================= ] 85.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 360/400 runs [================== ] 90.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 380/400 runs [=================== ] 95.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 400/400 runs [====================]100.0% MainProcess pypet.environment.Environment INFO Pool has joined, will delete it. MainProcess pypet.environment.MultiprocContext INFO The Storage Queue will no longer accept new data. Hang in there for a little while. There still might be some data in the queue that needs to be stored. MainProcess pypet.environment.MultiprocContext INFO The Storage Queue has joined. IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_04_MP`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_04_MP`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Example_04_MP`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Example_04_MP` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Example_04_MP`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Example_04_MP`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Example_04_MP`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Example_04_MP` were completed successfully. IMPORTED MATPLOTLIB WITH AGG Disabled redirection of `stdout`. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_05.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_05_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_05_Euler_Integration`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Example_05_Euler_Integration`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/3 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 3 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 3 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/3 runs [====== ] 33.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #1 of 3 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 3 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/3 runs [============= ] 66.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #2 of 3 ========================================= MainProcess pypet INFO ========================================= Finished single run #2 of 3 ========================================= MainProcess pypet INFO PROGRESS: Finished 3/3 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_05_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_05_Euler_Integration`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Example_05_Euler_Integration`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Example_05_Euler_Integration` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Example_05_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/parameter.py:1305: FutureWarning: ChainedAssignmentError: behaviour will change in pandas 3.0! You are setting values through chained assignment. Currently this works in certain cases, but when using Copy-on-Write (which will become the default behaviour in pandas 3.0) this will never work to update the original DataFrame or Series, because the intermediate object on which we are setting values will behave as a copy. A typical example is when you are setting values in a column of a DataFrame, like: df["col"][row_indexer] = value Use `df.loc[row_indexer, "col"] = values` instead, to perform the assignment in a single step and ensure this keeps updating the original `df`. See the caveats in the documentation: https://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#returning-a-view-versus-a-copy store_dict["explored_data" + ArrayParameter.IDENTIFIER]["idx"][ MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `derived_parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Example_05_Euler_Integration`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Example_05_Euler_Integration`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Example_05_Euler_Integration` were completed successfully. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_05.hdf5`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Example_05_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `derived_parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService ERROR Failed loading `Trajectory Example_05_Euler_Integration (`Go for Euler!`, len:3): (config: ), (derived_parameters: )` MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_05.hdf5`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Example_05_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `derived_parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `1`. IMPORTED MATPLOTLIB WITH AGG That did'nt work, I am sorry: Could not create the class named `FunctionParameter`. ---------- The source code of your function ---------- def diff_lorenz(value_array, sigma, beta, rho): """The Lorenz attractor differential equation :param value_array: 3d array containing the x,y, and z component values. :param sigma: Constant attractor parameter :param beta: FConstant attractor parameter :param rho: Constant attractor parameter :return: 3d array of the Lorenz system evaluated at `value_array` """ diff_array = np.zeros(3) diff_array[0] = sigma * (value_array[1]-value_array[0]) diff_array[1] = value_array[0] * (rho - value_array[2]) - value_array[1] diff_array[2] = value_array[0] * value_array[1] - beta * value_array[2] return diff_array MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_06.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.naturalnaming.NaturalNamingInterface INFO You have marked parameter parameters.diff_name for change before, so here you go! MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_06_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_06_Euler_Integration`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Example_06_Euler_Integration`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/3 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 3 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 3 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/3 runs [====== ] 33.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #1 of 3 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 3 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/3 runs [============= ] 66.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #2 of 3 ========================================= MainProcess pypet INFO ========================================= Finished single run #2 of 3 ========================================= MainProcess pypet INFO PROGRESS: Finished 3/3 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_06_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_06_Euler_Integration`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Example_06_Euler_Integration`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Example_06_Euler_Integration` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Example_06_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/parameter.py:1305: FutureWarning: ChainedAssignmentError: behaviour will change in pandas 3.0! You are setting values through chained assignment. Currently this works in certain cases, but when using Copy-on-Write (which will become the default behaviour in pandas 3.0) this will never work to update the original DataFrame or Series, because the intermediate object on which we are setting values will behave as a copy. A typical example is when you are setting values in a column of a DataFrame, like: df["col"][row_indexer] = value Use `df.loc[row_indexer, "col"] = values` instead, to perform the assignment in a single step and ensure this keeps updating the original `df`. See the caveats in the documentation: https://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#returning-a-view-versus-a-copy store_dict["explored_data" + ArrayParameter.IDENTIFIER]["idx"][ MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `derived_parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Example_06_Euler_Integration`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Example_06_Euler_Integration`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Example_06_Euler_Integration` were completed successfully. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Example_06_Euler_Integration`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `derived_parameters` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `1`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `1`. IMPORTED MATPLOTLIB WITH AGG ---------- The source code of your function ---------- def diff_roessler(value_array, a, c): """The Roessler attractor differential equation :param value_array: 3d array containing the x,y, and z component values. :param a: Constant attractor parameter :param c: Constant attractor parameter :return: 3d array of the Roessler system evaluated at `value_array` """ b=a diff_array = np.zeros(3) diff_array[0] = -value_array[1] - value_array[2] diff_array[1] = value_array[0] + a * value_array[1] diff_array[2] = b + value_array[2] * (value_array[0] - c) return diff_array MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_08.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example08`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example08`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Example08`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/12 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/12 runs [= ] 8.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #1 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/12 runs [=== ] 16.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #2 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #2 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 3/12 runs [===== ] 25.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #3 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #3 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 4/12 runs [====== ] 33.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #4 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #4 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 5/12 runs [======== ] 41.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #5 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #5 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 6/12 runs [========== ] 50.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #6 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #6 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 7/12 runs [=========== ] 58.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #7 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #7 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 8/12 runs [============= ] 66.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #8 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #8 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 9/12 runs [=============== ] 75.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #9 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #9 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 10/12 runs [================ ] 83.3%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #10 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #10 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 11/12 runs [================== ] 91.7%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #11 of 12 ========================================= MainProcess pypet INFO ========================================= Finished single run #11 of 12 ========================================= MainProcess pypet INFO PROGRESS: Finished 12/12 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example08`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example08`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Example08`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Example08` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Example08`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Example08`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Example08`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Example08` were completed successfully. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Example08`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `2`. IMPORTED MATPLOTLIB WITH AGG The run names and results for parameter combinations with x==2 or y==8: run_00000002: x=1, y=8, z=8 run_00000003: x=2, y=6, z=12 run_00000004: x=2, y=7, z=14 run_00000005: x=2, y=8, z=16 run_00000008: x=3, y=8, z=24 run_00000011: x=4, y=8, z=32 IMPORTED MATPLOTLIB WITH AGG mat1 contains 0.310619 at position [10,10,10] mat2 contains 0.926628 at position [42,13] As promised: Nothing there! Told you! mat1 contains 0.310619 at position [10,10,10] And do not forget: Always look on the bright side of life! MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_10.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example10`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example10`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Example10`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/144 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 144 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 144 ========================================= MainProcess pypet INFO ========================================= Starting single run #1 of 144 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 144 ========================================= MainProcess pypet INFO ========================================= Starting single run #2 of 144 ========================================= MainProcess pypet INFO 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MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example10`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Example10`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Example10` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Example10`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Example10`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Example10`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Example10` were completed successfully. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Example10`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `2`. IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_12.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO Starting multiprocessing with at most 2 processes running at the same time. MainProcess pypet INFO PROGRESS: Finished 0/12 runs [ ] 0.0% MainProcess pypet INFO PROGRESS: Finished 1/12 runs [= ] 8.3%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 2/12 runs [=== ] 16.7%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 3/12 runs [===== ] 25.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 4/12 runs [====== ] 33.3%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 5/12 runs [======== ] 41.7%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 6/12 runs [========== ] 50.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 7/12 runs [=========== ] 58.3%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 8/12 runs [============= ] 66.7%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 9/12 runs [=============== ] 75.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 10/12 runs [================ ] 83.3%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 11/12 runs [================== ] 91.7%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 12/12 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Multiplication` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Multiplication` were completed successfully. [ 6 7 8 12 14 16 18 21 24 24 28 32] MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_14.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/2 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 2 ========================================= MainProcess pypet INFO ========================================= Finished single run #0 of 2 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/2 runs [========== ] 50.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #1 of 2 ========================================= MainProcess pypet INFO ========================================= Finished single run #1 of 2 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/2 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Multiplication` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch/node `mylink1`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Multiplication`. ************************************************************ IMPORTED MATPLOTLIB WITH AGG x=1 Parameter parameters.x (len:2, `I am the first dimension!`): 1 MainProcess pypet.environment.Environment INFO All runs of trajectory `Multiplication` were completed successfully. IMPORTED MATPLOTLIB WITH AGG t=1 w=2 Linking to x gives: 1 INFO:pypet.storageservice.HDF5StorageService:I will use the hdf5 file `hdf5/example_16.hdf5`. INFO:pypet.storageservice.HDF5StorageService:Initialising storage or updating meta data of Trajectory `my_trajectory`. INFO:pypet.storageservice.HDF5StorageService:Finished init or meta data update for `my_trajectory`. IMPORTED MATPLOTLIB WITH AGG The last process to manipulate the trajectory was: `ForkPoolWorker-4` MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_18.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.environment.MultiprocContext INFO Starting the Storage Queue! MainProcess pypet.environment.Environment INFO Starting Pool with 2 processes MainProcess pypet.environment.Environment INFO Freezing pool input MainProcess pypet INFO PROGRESS: Finished 0/2500 runs [ ] 0.0% MainProcess pypet INFO PROGRESS: Finished 125/2500 runs [= ] 5.0%, remaining: 0:00:10 MainProcess pypet INFO PROGRESS: Finished 250/2500 runs [== ] 10.0%, remaining: 0:00:10 MainProcess pypet INFO PROGRESS: Finished 375/2500 runs [=== ] 15.0%, remaining: 0:00:10 MainProcess pypet INFO PROGRESS: Finished 500/2500 runs [==== ] 20.0%, remaining: 0:00:10 MainProcess pypet INFO PROGRESS: Finished 625/2500 runs [===== ] 25.0%, remaining: 0:00:09 MainProcess pypet INFO PROGRESS: Finished 750/2500 runs [====== ] 30.0%, remaining: 0:00:09 MainProcess pypet INFO PROGRESS: Finished 875/2500 runs [======= ] 35.0%, remaining: 0:00:08 MainProcess pypet INFO PROGRESS: Finished 1000/2500 runs [======== ] 40.0%, remaining: 0:00:08 MainProcess pypet INFO PROGRESS: Finished 1125/2500 runs [========= ] 45.0%, remaining: 0:00:07 MainProcess pypet INFO PROGRESS: Finished 1250/2500 runs [========== ] 50.0%, remaining: 0:00:06 MainProcess pypet INFO PROGRESS: Finished 1375/2500 runs [=========== ] 55.0%, remaining: 0:00:06 MainProcess pypet INFO PROGRESS: Finished 1500/2500 runs [============ ] 60.0%, remaining: 0:00:05 MainProcess pypet INFO PROGRESS: Finished 1625/2500 runs [============= ] 65.0%, remaining: 0:00:04 MainProcess pypet INFO PROGRESS: Finished 1750/2500 runs [============== ] 70.0%, remaining: 0:00:04 MainProcess pypet INFO PROGRESS: Finished 1875/2500 runs [=============== ] 75.0%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 2000/2500 runs [================ ] 80.0%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 2125/2500 runs [================= ] 85.0%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 2250/2500 runs [================== ] 90.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 2375/2500 runs [=================== ] 95.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 2500/2500 runs [====================]100.0% MainProcess pypet.environment.Environment INFO Pool has joined, will delete it. MainProcess pypet.environment.MultiprocContext INFO The Storage Queue will no longer accept new data. Hang in there for a little while. There still might be some data in the queue that needs to be stored. MainProcess pypet.environment.MultiprocContext INFO The Storage Queue has joined. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Multiplication` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Multiplication`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Multiplication`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Multiplication`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Multiplication` were completed successfully. The result of run 2042 is: 1680 The result of run 2044 is: 1760 IMPORTED MATPLOTLIB WITH AGG Start of evolution -- Generation 0 -- Evaluated 100 individuals Min 17.0 Max 34.0 Avg 25.3 Std 3.436568055487909 -- Generation 1 -- Evaluated 61 individuals Min 23.0 Max 35.0 Avg 28.16 Std 2.862586243242284 -- Generation 2 -- Evaluated 62 individuals Min 23.0 Max 35.0 Avg 30.52 Std 2.4473659309551787 -- Generation 3 -- Evaluated 66 individuals Min 27.0 Max 37.0 Avg 32.4 Std 1.9595917942265215 -- Generation 4 -- Evaluated 66 individuals Min 29.0 Max 39.0 Avg 33.87 Std 1.863625498859725 -- Generation 5 -- Evaluated 53 individuals Min 30.0 Max 41.0 Avg 35.63 Std 1.8420369160253016 -- Generation 6 -- Evaluated 58 individuals Min 31.0 Max 41.0 Avg 37.05 Std 1.768473918382755 -- Generation 7 -- Evaluated 73 individuals Min 34.0 Max 41.0 Avg 38.59 Std 1.449793088685299 -- Generation 8 -- Evaluated 61 individuals Min 36.0 Max 43.0 Avg 39.73 Std 1.2794920867282242 -- Generation 9 -- Evaluated 56 individuals Min 38.0 Max 43.0 Avg 40.71 Std 1.012867217358655 -- Generation 10 -- Evaluated 60 individuals Min 39.0 Max 44.0 Avg 41.54 Std 1.0432641084596423 -- Generation 11 -- Evaluated 59 individuals Min 39.0 Max 46.0 Avg 42.46 Std 1.307057764599554 -- Generation 12 -- Evaluated 65 individuals Min 41.0 Max 46.0 Avg 43.32 Std 1.0380751417889145 -- Generation 13 -- Evaluated 68 individuals Min 41.0 Max 47.0 Avg 44.15 Std 1.125833024919839 -- Generation 14 -- Evaluated 50 individuals Min 43.0 Max 47.0 Avg 44.99 Std 0.9643132271206599 -- Generation 15 -- Evaluated 68 individuals Min 43.0 Max 49.0 Avg 45.75 Std 1.1169153951844093 -- Generation 16 -- Evaluated 60 individuals Min 44.0 Max 48.0 Avg 46.4 Std 0.9380831519647441 -- Generation 17 -- Evaluated 53 individuals Min 45.0 Max 49.0 Avg 47.19 Std 0.9021640649017801 -- Generation 18 -- Evaluated 53 individuals Min 46.0 Max 49.0 Avg 47.77 Std 0.7190966555335749 -- Generation 19 -- Evaluated 60 individuals Min 46.0 Max 50.0 Avg 48.17 Std 0.7078841713161492 -- End of (successful) evolution -- Best individual is [1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1], (50.0,) IMPORTED MATPLOTLIB WITH AGG Start of evolution -- Generation 0 -- Evaluated 100 individuals Min 17.0 Max 34.0 Avg 25.3 Std 3.436568055487909 -- Generation 1 -- Evaluated 61 individuals Min 23.0 Max 35.0 Avg 28.16 Std 2.862586243242284 -- Generation 2 -- Evaluated 62 individuals Min 23.0 Max 35.0 Avg 30.52 Std 2.4473659309551787 -- Generation 3 -- Evaluated 66 individuals Min 27.0 Max 37.0 Avg 32.4 Std 1.9595917942265215 -- Generation 4 -- Evaluated 66 individuals Min 29.0 Max 39.0 Avg 33.87 Std 1.863625498859725 -- Generation 5 -- Evaluated 53 individuals Min 30.0 Max 41.0 Avg 35.63 Std 1.8420369160253016 -- Generation 6 -- Evaluated 58 individuals Min 31.0 Max 41.0 Avg 37.05 Std 1.768473918382755 -- Generation 7 -- Evaluated 73 individuals Min 34.0 Max 41.0 Avg 38.59 Std 1.449793088685299 -- Generation 8 -- Evaluated 61 individuals Min 36.0 Max 43.0 Avg 39.73 Std 1.2794920867282242 -- Generation 9 -- Evaluated 56 individuals Min 38.0 Max 43.0 Avg 40.71 Std 1.012867217358655 -- Generation 10 -- Evaluated 60 individuals Min 39.0 Max 44.0 Avg 41.54 Std 1.0432641084596423 -- Generation 11 -- Evaluated 59 individuals Min 39.0 Max 46.0 Avg 42.46 Std 1.307057764599554 -- Generation 12 -- Evaluated 65 individuals Min 41.0 Max 46.0 Avg 43.32 Std 1.0380751417889145 -- Generation 13 -- Evaluated 68 individuals Min 41.0 Max 47.0 Avg 44.15 Std 1.125833024919839 -- Generation 14 -- Evaluated 50 individuals Min 43.0 Max 47.0 Avg 44.99 Std 0.9643132271206599 -- Generation 15 -- Evaluated 68 individuals Min 43.0 Max 49.0 Avg 45.75 Std 1.1169153951844093 -- Generation 16 -- Evaluated 60 individuals Min 44.0 Max 48.0 Avg 46.4 Std 0.9380831519647441 -- Generation 17 -- Evaluated 53 individuals Min 45.0 Max 49.0 Avg 47.19 Std 0.9021640649017801 -- Generation 18 -- Evaluated 53 individuals Min 46.0 Max 49.0 Avg 47.77 Std 0.7190966555335749 -- Generation 19 -- Evaluated 60 individuals Min 46.0 Max 50.0 Avg 48.17 Std 0.7078841713161492 -- End of (successful) evolution -- Best individual is [1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1], (50.0,) IMPORTED MATPLOTLIB WITH AGG Evaluated 0 individuals Min 17.0 Max 34.0 Avg 25.3 Std 3.436568055487909 Evaluated 0 individuals Min 23.0 Max 35.0 Avg 28.16 Std 2.862586243242284 Evaluated 0 individuals Min 23.0 Max 35.0 Avg 30.52 Std 2.4473659309551787 Evaluated 0 individuals Min 27.0 Max 37.0 Avg 32.4 Std 1.9595917942265215 Evaluated 0 individuals Min 29.0 Max 39.0 Avg 33.87 Std 1.863625498859725 Evaluated 0 individuals Min 30.0 Max 41.0 Avg 35.63 Std 1.8420369160253016 Evaluated 0 individuals Min 31.0 Max 41.0 Avg 37.05 Std 1.768473918382755 Evaluated 0 individuals Min 34.0 Max 41.0 Avg 38.59 Std 1.449793088685299 Evaluated 0 individuals Min 36.0 Max 43.0 Avg 39.73 Std 1.2794920867282242 Evaluated 0 individuals Min 38.0 Max 43.0 Avg 40.71 Std 1.012867217358655 Evaluated 0 individuals Min 39.0 Max 44.0 Avg 41.54 Std 1.0432641084596423 Evaluated 0 individuals Min 39.0 Max 46.0 Avg 42.46 Std 1.307057764599554 Evaluated 0 individuals Min 41.0 Max 46.0 Avg 43.32 Std 1.0380751417889145 Evaluated 0 individuals Min 41.0 Max 47.0 Avg 44.15 Std 1.125833024919839 Evaluated 0 individuals Min 43.0 Max 47.0 Avg 44.99 Std 0.9643132271206599 Evaluated 0 individuals Min 43.0 Max 49.0 Avg 45.75 Std 1.1169153951844093 Evaluated 0 individuals Min 44.0 Max 48.0 Avg 46.4 Std 0.9380831519647441 Evaluated 0 individuals Min 45.0 Max 49.0 Avg 47.19 Std 0.9021640649017801 Evaluated 0 individuals Min 46.0 Max 49.0 Avg 47.77 Std 0.7190966555335749 Evaluated 0 individuals Min 46.0 Max 50.0 Avg 48.17 Std 0.7078841713161492 -- End of (successful) evolution -- Best individual is [1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1], (50.0,) IMPORTED MATPLOTLIB WITH AGG Start of evolution -- Generation 0 -- Evaluated 100 individuals Min 17.0 Max 34.0 Avg 25.3 Std 3.436568055487909 -- Generation 1 -- Evaluated 61 individuals Min 23.0 Max 35.0 Avg 28.16 Std 2.862586243242284 -- Generation 2 -- Evaluated 62 individuals Min 23.0 Max 35.0 Avg 30.52 Std 2.4473659309551787 -- Generation 3 -- Evaluated 66 individuals Min 27.0 Max 37.0 Avg 32.4 Std 1.9595917942265215 -- Generation 4 -- Evaluated 66 individuals Min 29.0 Max 39.0 Avg 33.87 Std 1.863625498859725 -- Generation 5 -- Evaluated 53 individuals Min 30.0 Max 41.0 Avg 35.63 Std 1.8420369160253016 -- Generation 6 -- Evaluated 58 individuals Min 31.0 Max 41.0 Avg 37.05 Std 1.768473918382755 -- Generation 7 -- Evaluated 73 individuals Min 34.0 Max 41.0 Avg 38.59 Std 1.449793088685299 -- Generation 8 -- Evaluated 61 individuals Min 36.0 Max 43.0 Avg 39.73 Std 1.2794920867282242 -- Generation 9 -- Evaluated 56 individuals Min 38.0 Max 43.0 Avg 40.71 Std 1.012867217358655 -- Generation 10 -- Evaluated 60 individuals Min 39.0 Max 44.0 Avg 41.54 Std 1.0432641084596423 -- Generation 11 -- Evaluated 59 individuals Min 39.0 Max 46.0 Avg 42.46 Std 1.307057764599554 -- Generation 12 -- Evaluated 65 individuals Min 41.0 Max 46.0 Avg 43.32 Std 1.0380751417889145 -- Generation 13 -- Evaluated 68 individuals Min 41.0 Max 47.0 Avg 44.15 Std 1.125833024919839 -- Generation 14 -- Evaluated 50 individuals Min 43.0 Max 47.0 Avg 44.99 Std 0.9643132271206599 -- Generation 15 -- Evaluated 68 individuals Min 43.0 Max 49.0 Avg 45.75 Std 1.1169153951844093 -- Generation 16 -- Evaluated 60 individuals Min 44.0 Max 48.0 Avg 46.4 Std 0.9380831519647441 -- Generation 17 -- Evaluated 53 individuals Min 45.0 Max 49.0 Avg 47.19 Std 0.9021640649017801 -- Generation 18 -- Evaluated 53 individuals Min 46.0 Max 49.0 Avg 47.77 Std 0.7190966555335749 -- Generation 19 -- Evaluated 60 individuals Min 46.0 Max 50.0 Avg 48.17 Std 0.7078841713161492 -- End of (successful) evolution -- Best individual is [1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1], (50.0,) MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/example_23.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_23_BRIAN2`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_23_BRIAN2`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Example_23_BRIAN2`. ************************************************************ MainProcess pypet INFO PROGRESS: Finished 0/4 runs [ ] 0.0% MainProcess pypet INFO ========================================= Starting single run #0 of 4 ========================================= INFO No numerical integration method specified for group 'neurongroup', using method 'euler' (took 0.01s, trying other methods took 0.03s). [brian2.stateupdaters.base.method_choice] IMPORTED MATPLOTLIB WITH AGG Initial Run MainProcess root INFO creating /tmp/brian_flag_test_9g_6az1f/tmp MainProcess root INFO creating /tmp/brian_flag_test_9g_6az1f/tmp/brian_flag_test_9g_6az1f MainProcess root INFO g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -c /tmp/brian_flag_test_9g_6az1f/flag_test.cpp -o /tmp/brian_flag_test_9g_6az1f/tmp/brian_flag_test_9g_6az1f/flag_test.o -w WARNING Removing unsupported flag '-w' from compiler flags. [brian2.codegen.cpp_prefs] MainProcess root INFO creating /tmp/brian_flag_test_kmog9fau/tmp MainProcess root INFO creating /tmp/brian_flag_test_kmog9fau/tmp/brian_flag_test_kmog9fau MainProcess root INFO g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -c /tmp/brian_flag_test_kmog9fau/flag_test.cpp -o /tmp/brian_flag_test_kmog9fau/tmp/brian_flag_test_kmog9fau/flag_test.o -O3 WARNING Removing unsupported flag '-O3' from compiler flags. [brian2.codegen.cpp_prefs] MainProcess root INFO creating /tmp/brian_flag_test_b5801fej/tmp MainProcess root INFO creating /tmp/brian_flag_test_b5801fej/tmp/brian_flag_test_b5801fej MainProcess root INFO g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -c /tmp/brian_flag_test_b5801fej/flag_test.cpp -o /tmp/brian_flag_test_b5801fej/tmp/brian_flag_test_b5801fej/flag_test.o -ffast-math WARNING Removing unsupported flag '-ffast-math' from compiler flags. [brian2.codegen.cpp_prefs] MainProcess root INFO creating /tmp/brian_flag_test_jldhkes1/tmp MainProcess root INFO creating /tmp/brian_flag_test_jldhkes1/tmp/brian_flag_test_jldhkes1 MainProcess root INFO g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -c /tmp/brian_flag_test_jldhkes1/flag_test.cpp -o /tmp/brian_flag_test_jldhkes1/tmp/brian_flag_test_jldhkes1/flag_test.o -fno-finite-math-only WARNING Removing unsupported flag '-fno-finite-math-only' from compiler flags. [brian2.codegen.cpp_prefs] MainProcess root INFO creating /tmp/brian_flag_test_ihbvfey3/tmp MainProcess root INFO creating /tmp/brian_flag_test_ihbvfey3/tmp/brian_flag_test_ihbvfey3 MainProcess root INFO g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -c /tmp/brian_flag_test_ihbvfey3/flag_test.cpp -o /tmp/brian_flag_test_ihbvfey3/tmp/brian_flag_test_ihbvfey3/flag_test.o -march=native WARNING Removing unsupported flag '-march=native' from compiler flags. [brian2.codegen.cpp_prefs] MainProcess root INFO creating /tmp/brian_flag_test_7dtlg51_/tmp MainProcess root INFO creating /tmp/brian_flag_test_7dtlg51_/tmp/brian_flag_test_7dtlg51_ MainProcess root INFO g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -c /tmp/brian_flag_test_7dtlg51_/flag_test.cpp -o /tmp/brian_flag_test_7dtlg51_/tmp/brian_flag_test_7dtlg51_/flag_test.o -std=c++11 WARNING Removing unsupported flag '-std=c++11' from compiler flags. [brian2.codegen.cpp_prefs] MainProcess root INFO building '_cython_magic_9aa60e923638aef74d50ee27d74ef09a' extension MainProcess root INFO creating /builddir/.cython/brian_extensions/builddir MainProcess root INFO creating /builddir/.cython/brian_extensions/builddir/.cython MainProcess root INFO creating /builddir/.cython/brian_extensions/builddir/.cython/brian_extensions MainProcess root INFO g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/include -I/usr/lib64/python3.13/site-packages/brian2/synapses -I/usr/include/python3.13 -c /builddir/.cython/brian_extensions/_cython_magic_9aa60e923638aef74d50ee27d74ef09a.cpp -o /builddir/.cython/brian_extensions/builddir/.cython/brian_extensions/_cython_magic_9aa60e923638aef74d50ee27d74ef09a.o WARNING Cannot use Cython, a test compilation failed: command 'g++' failed: No such file or directory (CompileError) Certain compiler configurations (e.g. clang in a conda environment on OS X) are known to be problematic. Note that you can switch the compiler by setting the 'CC' and 'CXX' environment variables. For example, you may want to try 'CC=gcc' and 'CXX=g++'. [brian2.codegen.runtime.cython_rt.cython_rt.failed_compile_test] INFO Cannot use compiled code, falling back to the numpy code generation target. Note that this will likely be slower than using compiled code. Set the code generation to numpy manually to avoid this message: prefs.codegen.target = "numpy" [brian2.devices.device.codegen_fallback] Starting simulation at t=0. s for a duration of 100. ms 100. ms (100%) simulated in < 1s Measurement run Starting simulation at t=100. ms for a duration of 0.5 s 0.5 s (100%) simulated in < 1s MainProcess pypet INFO ========================================= Finished single run #0 of 4 ========================================= MainProcess pypet INFO PROGRESS: Finished 1/4 runs [===== ] 25.0%, remaining: 0:00:02 MainProcess pypet INFO ========================================= Starting single run #1 of 4 ========================================= INFO No numerical integration method specified for group 'neurongroup', using method 'euler' (took 0.00s, trying other methods took 0.01s). [brian2.stateupdaters.base.method_choice] Initial Run Starting simulation at t=0. s for a duration of 100. ms 100. ms (100%) simulated in < 1s Measurement run Starting simulation at t=100. ms for a duration of 0.5 s 0.5 s (100%) simulated in < 1s MainProcess pypet INFO ========================================= Finished single run #1 of 4 ========================================= MainProcess pypet INFO PROGRESS: Finished 2/4 runs [========== ] 50.0%, remaining: 0:00:01 MainProcess pypet INFO ========================================= Starting single run #2 of 4 ========================================= INFO No numerical integration method specified for group 'neurongroup', using method 'euler' (took 0.00s, trying other methods took 0.01s). [brian2.stateupdaters.base.method_choice] Initial Run Starting simulation at t=0. s for a duration of 100. ms 100. ms (100%) simulated in < 1s Measurement run Starting simulation at t=100. ms for a duration of 0.5 s 0.5 s (100%) simulated in < 1s MainProcess pypet INFO ========================================= Finished single run #2 of 4 ========================================= MainProcess pypet INFO PROGRESS: Finished 3/4 runs [=============== ] 75.0%, remaining: 0:00:00 MainProcess pypet INFO ========================================= Starting single run #3 of 4 ========================================= INFO No numerical integration method specified for group 'neurongroup', using method 'euler' (took 0.00s, trying other methods took 0.01s). [brian2.stateupdaters.base.method_choice] Initial Run Starting simulation at t=0. s for a duration of 100. ms 100. ms (100%) simulated in < 1s Measurement run Starting simulation at t=100. ms for a duration of 0.5 s 0.5 s (100%) simulated in < 1s MainProcess pypet INFO ========================================= Finished single run #3 of 4 ========================================= MainProcess pypet INFO PROGRESS: Finished 4/4 runs [====================]100.0% MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Example_23_BRIAN2`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Example_23_BRIAN2`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Example_23_BRIAN2`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Example_23_BRIAN2` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Example_23_BRIAN2`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Example_23_BRIAN2`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Example_23_BRIAN2`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Example_23_BRIAN2` were completed successfully. IMPORTED MATPLOTLIB WITH AGG Computing all patterns [====================]100.0%Plotting all patterns [====================]100.0%MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_17_wrapping_an_existing_project/experiments/ca_patterns_pypet/all_patterns.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess root INFO Starting Simulation MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `cellular_automata`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `cellular_automata`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `cellular_automata`. ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `cellular_automata`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `cellular_automata`. IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.environment.MultiprocContext INFO Starting the Storage Queue! MainProcess pypet.environment.Environment INFO Starting multiprocessing with at most 4 processes running at the same time. MainProcess pypet INFO PROGRESS: Finished 0/10 runs [ ] 0.0% MainProcess pypet INFO PROGRESS: Finished 1/10 runs [== ] 10.0%, remaining: 0:00:09 MainProcess pypet INFO PROGRESS: Finished 2/10 runs [==== ] 20.0%, remaining: 0:00:04 MainProcess pypet INFO PROGRESS: Finished 3/10 runs [====== ] 30.0%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 4/10 runs [======== ] 40.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 5/10 runs [========== ] 50.0%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 6/10 runs [============ ] 60.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 7/10 runs [============== ] 70.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 8/10 runs [================ ] 80.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 9/10 runs [================== ] 90.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 10/10 runs [====================]100.0% MainProcess pypet.environment.MultiprocContext INFO The Storage Queue will no longer accept new data. Hang in there for a little while. There still might be some data in the queue that needs to be stored. MainProcess pypet.environment.MultiprocContext INFO The Storage Queue has joined. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `cellular_automata`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `cellular_automata`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `cellular_automata`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `cellular_automata` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `cellular_automata`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `cellular_automata`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `cellular_automata`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `cellular_automata` were completed successfully. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `cellular_automata`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `2`. MainProcess root INFO Printing data MainProcess root INFO [== ] 10.0% MainProcess root INFO [==== ] 20.0%, remaining: 0:00:00 MainProcess root INFO [====== ] 30.0%, remaining: 0:00:00 MainProcess root INFO [======== ] 40.0%, remaining: 0:00:00 MainProcess root INFO [========== ] 50.0%, remaining: 0:00:00 MainProcess root INFO [============ ] 60.0%, remaining: 0:00:00 MainProcess root INFO [============== ] 70.0%, remaining: 0:00:00 MainProcess root INFO [================ ] 80.0%, remaining: 0:00:00 MainProcess root INFO [================== ] 90.0%, remaining: 0:00:00 MainProcess root INFO [====================]100.0% MainProcess STDOUT INFO Established redirection of `stdout`. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/FiringRate.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess STDOUT INFO Adding Parameters MainProcess STDOUT INFO Adding exploration of I and tau_ref MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRate`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRate`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `FiringRate`. ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRate`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRate`. MainProcess pypet.environment.MultiprocContext INFO Starting the Storage Queue! MainProcess pypet.environment.Environment INFO Starting multiprocessing with at most 2 processes running at the same time. MainProcess pypet INFO PROGRESS: Finished 0/303 runs [ ] 0.0% MainProcess pypet INFO PROGRESS: Finished 16/303 runs [= ] 5.3%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 31/303 runs [== ] 10.2%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 46/303 runs [=== ] 15.2%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 61/303 runs [==== ] 20.1%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 76/303 runs [===== ] 25.1%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 91/303 runs [====== ] 30.0%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 107/303 runs [======= ] 35.3%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 122/303 runs [======== ] 40.3%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 137/303 runs [========= ] 45.2%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 152/303 runs [========== ] 50.2%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 167/303 runs [=========== ] 55.1%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 182/303 runs [============ ] 60.1%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 197/303 runs [============= ] 65.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 213/303 runs [============== ] 70.3%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 228/303 runs [=============== ] 75.2%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 243/303 runs [================ ] 80.2%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 258/303 runs [================= ] 85.1%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 273/303 runs [================== ] 90.1%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 288/303 runs [=================== ] 95.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 303/303 runs [====================]100.0% MainProcess pypet.environment.MultiprocContext INFO The Storage Queue will no longer accept new data. Hang in there for a little while. There still might be some data in the queue that needs to be stored. MainProcess pypet.environment.MultiprocContext INFO The Storage Queue has joined. IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.environment.Environment INFO Performing POSTPROCESSING MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRate`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRate`. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRate`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRate`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `FiringRate`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `FiringRate` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `FiringRate`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `results`. /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/storageservice.py:4210: PerformanceWarning: your performance may suffer as PyTables will pickle object types that it cannot map directly to c-types [inferred_type->floating,key->block0_values] [items->Index([5.0, 7.5, 10.0], dtype='float64')] self._hdf5store.put(name, data, **kwargs) MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `FiringRate`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `FiringRate`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `FiringRate` were completed successfully. IMPORTED MATPLOTLIB WITH AGG Disabled redirection of `stdout`. IMPORTED MATPLOTLIB WITH AGG MainProcess STDOUT INFO Established redirection of `stdout`. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/FiringRate.hdf5`. MainProcess pypet.storageservice.HDF5StorageService INFO You specified ``overwrite_file=True``, so I deleted the file `hdf5/FiringRate.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess STDOUT INFO Adding Parameters MainProcess STDOUT INFO Adding exploration of I and tau_ref MainProcess pypet.environment.Environment INFO ************************************************************ STARTING PPREPROCESSING for trajectory `FiringRatePipeline` ************************************************************ MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRatePipeline`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRatePipeline`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `FiringRatePipeline`. ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRatePipeline`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRatePipeline`. MainProcess pypet.environment.Environment INFO Starting multiprocessing with at most 2 processes running at the same time. MainProcess pypet INFO PROGRESS: Finished 0/303 runs [ ] 0.0% MainProcess pypet INFO PROGRESS: Finished 16/303 runs [= ] 5.3%, remaining: 0:00:04 MainProcess pypet INFO PROGRESS: Finished 31/303 runs [== ] 10.2%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 46/303 runs [=== ] 15.2%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 61/303 runs [==== ] 20.1%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 76/303 runs [===== ] 25.1%, remaining: 0:00:03 MainProcess pypet INFO PROGRESS: Finished 91/303 runs [====== ] 30.0%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 107/303 runs [======= ] 35.3%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 122/303 runs [======== ] 40.3%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 137/303 runs [========= ] 45.2%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 152/303 runs [========== ] 50.2%, remaining: 0:00:02 MainProcess pypet INFO PROGRESS: Finished 167/303 runs [=========== ] 55.1%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 182/303 runs [============ ] 60.1%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 197/303 runs [============= ] 65.0%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 213/303 runs [============== ] 70.3%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 228/303 runs [=============== ] 75.2%, remaining: 0:00:01 MainProcess pypet INFO PROGRESS: Finished 243/303 runs [================ ] 80.2%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 258/303 runs [================= ] 85.1%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 273/303 runs [================== ] 90.1%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 288/303 runs [=================== ] 95.0%, remaining: 0:00:00 MainProcess pypet INFO PROGRESS: Finished 303/303 runs [====================]100.0% MainProcess pypet.environment.Environment INFO Performing POSTPROCESSING MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRatePipeline`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRatePipeline`. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `FiringRatePipeline`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `FiringRatePipeline`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `FiringRatePipeline`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `FiringRatePipeline` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `FiringRatePipeline`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `results`. /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/lib/python3.13/site-packages/pypet/storageservice.py:4210: PerformanceWarning: your performance may suffer as PyTables will pickle object types that it cannot map directly to c-types [inferred_type->floating,key->block0_values] [items->Index([5.0, 7.5, 10.0], dtype='float64')] self._hdf5store.put(name, data, **kwargs) MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `FiringRatePipeline`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `FiringRatePipeline`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `FiringRatePipeline` were completed successfully. IMPORTED MATPLOTLIB WITH AGG Disabled redirection of `stdout`. MainProcess pypet.storageservice.HDF5StorageService INFO I will use the hdf5 file `hdf5/Clustered_Network.hdf5`. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.brian2.network.NetworkManager INFO Adding Parameters of Components MainProcess pypet.brian2.network.NetworkManager INFO Adding Parameters of Analysers MainProcess pypet.brian2.network.NetworkManager INFO Adding Parameters of Runner MainProcess pypet.brian2.network.NetworkManager INFO Pre-Building Components MainProcess pypet.brian2.network.NetworkManager INFO Pre-Building Analysers MainProcess pypet.brian2.network.NetworkManager INFO Pre-Building NetworkRunner MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Clustered_Network`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Clustered_Network`. MainProcess pypet.environment.Environment INFO I am preparing the Trajectory for the experiment and initialise the store. MainProcess pypet.environment.Environment INFO Initialising the storage for the trajectory. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Clustered_Network`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Clustered_Network`. MainProcess pypet.environment.Environment INFO ************************************************************ STARTING runs of trajectory `Clustered_Network`. ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Clustered_Network`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Clustered_Network`. IMPORTED MATPLOTLIB WITH AGG MainProcess pypet.environment.MultiprocContext INFO Starting the Storage Queue! MainProcess pypet.environment.Environment INFO Starting multiprocessing with at most 4 processes running at the same time. MainProcess pypet INFO PROGRESS: Finished 0/7 runs [ ] 0.0% Connecting ii Connecting ei Connecting ie Connectiong ee Starting simulation at t=0. s for a duration of 0.5 s 0.5 s (100%) simulated in 1s Starting simulation at t=0.5 s for a duration of 1.5 s Connecting ii Connecting ei Connecting ie Connecting ee cluster #0 of 20 Connecting cluster with other neurons of higher index Connecting ee cluster #1 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #2 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #3 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #4 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #5 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #6 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #7 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #8 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #9 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #10 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #11 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #12 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #13 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #14 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #15 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #16 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #17 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #18 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #19 of 20 Connecting cluster with other neurons of lower index Starting simulation at t=0. s for a duration of 0.5 s Connecting ii Connecting ei Connecting ie Connecting ee cluster #0 of 20 Connecting cluster with other neurons of higher index Connecting ee cluster #1 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #2 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #3 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #4 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #5 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #6 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #7 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #8 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #9 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #10 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #11 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #12 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #13 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #14 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #15 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #16 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #17 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #18 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #19 of 20 Connecting cluster with other neurons of lower index Starting simulation at t=0. s for a duration of 0.5 s Connecting ii Connecting ei Connecting ie Connecting ee cluster #0 of 20 Connecting cluster with other neurons of higher index Connecting ee cluster #1 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #2 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #3 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #4 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #5 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #6 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #7 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #8 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #9 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #10 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #11 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #12 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #13 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #14 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #15 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #16 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #17 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #18 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #19 of 20 Connecting cluster with other neurons of lower index Starting simulation at t=0. s for a duration of 0.5 s 1.5 s (100%) simulated in 4s 0.5 s (100%) simulated in 3s 0.5 s (100%) simulated in 3s 0.5 s (100%) simulated in 3s Plotting Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000000/spike.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000000/V.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000000/I_syn_e.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000000/I_syn_i.png R_ee: 1.000000, Mean FF: 0.497347 MainProcess pypet INFO PROGRESS: Finished 1/7 runs [== ] 14.3%, remaining: 0:00:46 Starting simulation at t=0.5 s for a duration of 1.5 s Starting simulation at t=0.5 s for a duration of 1.5 s Starting simulation at t=0.5 s for a duration of 1.5 s Connecting ii Connecting ei Connecting ie Connecting ee cluster #0 of 20 Connecting cluster with other neurons of higher index Connecting ee cluster #1 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #2 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #3 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #4 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #5 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #6 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #7 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #8 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #9 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #10 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #11 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #12 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #13 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #14 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #15 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #16 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #17 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #18 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #19 of 20 Connecting cluster with other neurons of lower index Starting simulation at t=0. s for a duration of 0.5 s 0.5 s (100%) simulated in 3s Starting simulation at t=0.5 s for a duration of 1.5 s 1.3767 s (91%) simulated in 10s, estimated 1s remaining. 1.36 s (90%) simulated in 10s, estimated 1s remaining. 1.3215 s (88%) simulated in 10s, estimated 1s remaining. 1.5 s (100%) simulated in 10s 1.5 s (100%) simulated in 11s 1.5 s (100%) simulated in 11s Plotting Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000002/spike.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000002/V.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000002/I_syn_e.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000002/I_syn_i.png R_ee: 1.800000, Mean FF: 0.518132 MainProcess pypet INFO PROGRESS: Finished 2/7 runs [===== ] 28.6%, remaining: 0:00:50 Plotting Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000003/spike.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000003/V.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000003/I_syn_e.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000003/I_syn_i.png R_ee: 2.200000, Mean FF: 0.508409 MainProcess pypet INFO PROGRESS: Finished 3/7 runs [======== ] 42.9%, remaining: 0:00:27 Plotting Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000001/spike.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000001/V.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000001/I_syn_e.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000001/I_syn_i.png R_ee: 1.400000, Mean FF: 0.485534 MainProcess pypet INFO PROGRESS: Finished 4/7 runs [=========== ] 57.1%, remaining: 0:00:15 1.5 s (100%) simulated in 8s Connecting ii Connecting ei Connecting ie Connecting ee cluster #0 of 20 Connecting cluster with other neurons of higher index Connecting ee cluster #1 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #2 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #3 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #4 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #5 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #6 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #7 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #8 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #9 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #10 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #11 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #12 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #13 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #14 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #15 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #16 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #17 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #18 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #19 of 20 Connecting cluster with other neurons of lower index Starting simulation at t=0. s for a duration of 0.5 s Connecting ii Connecting ei Connecting ie Connecting ee cluster #0 of 20 Connecting cluster with other neurons of higher index Connecting ee cluster #1 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #2 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #3 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #4 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #5 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #6 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #7 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #8 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #9 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #10 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #11 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #12 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #13 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #14 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #15 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #16 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #17 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #18 of 20 Connecting cluster with other neurons of lower index Connecting cluster with other neurons of higher index Connecting ee cluster #19 of 20 Connecting cluster with other neurons of lower index Starting simulation at t=0. s for a duration of 0.5 s Plotting Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000004/spike.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000004/V.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000004/I_syn_e.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000004/I_syn_i.png R_ee: 2.600000, Mean FF: 0.494338 MainProcess pypet INFO PROGRESS: Finished 5/7 runs [============== ] 71.4%, remaining: 0:00:09 0.5 s (100%) simulated in 2s 0.5 s (100%) simulated in 2s Starting simulation at t=0.5 s for a duration of 1.5 s Starting simulation at t=0.5 s for a duration of 1.5 s 1.5 s (100%) simulated in 5s 1.5 s (100%) simulated in 5s Plotting Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000005/spike.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000005/V.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000005/I_syn_e.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000005/I_syn_i.png R_ee: 3.000000, Mean FF: 0.945243 MainProcess pypet INFO PROGRESS: Finished 6/7 runs [================= ] 85.7%, remaining: 0:00:05 Plotting Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000006/spike.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000006/V.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000006/I_syn_e.png Current plot: /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/experiments/example_24/PLOTS/Clustered_Network/run_00000006/I_syn_i.png R_ee: 3.400000, Mean FF: 0.189464 MainProcess pypet INFO PROGRESS: Finished 7/7 runs [====================]100.0% MainProcess pypet.environment.MultiprocContext INFO The Storage Queue will no longer accept new data. Hang in there for a little while. There still might be some data in the queue that needs to be stored. MainProcess pypet.environment.MultiprocContext INFO The Storage Queue has joined. MainProcess pypet.storageservice.HDF5StorageService INFO Initialising storage or updating meta data of Trajectory `Clustered_Network`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished init or meta data update for `Clustered_Network`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED all runs of trajectory `Clustered_Network`. ************************************************************ MainProcess pypet.environment.Environment INFO ************************************************************ STARTING FINAL STORING of trajectory `Clustered_Network` ************************************************************ MainProcess pypet.storageservice.HDF5StorageService INFO Start storing Trajectory `Clustered_Network`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `config`. MainProcess pypet.storageservice.HDF5StorageService INFO Storing branch `parameters`. MainProcess pypet.storageservice.HDF5StorageService INFO Finished storing Trajectory `Clustered_Network`. MainProcess pypet.environment.Environment INFO ************************************************************ FINISHED FINAL STORING of trajectory `Clustered_Network`. ************************************************************ MainProcess pypet.environment.Environment INFO All runs of trajectory `Clustered_Network` were completed successfully. WARNING The object 'neurongroup_1' is getting deleted, but was never included in a network. This probably means that you did not store the object reference in a variable, or that the variable was not used to construct the network. The object was created here (most recent call only): File '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/clusternet.py', line 220, in _build_model neurons_e = NeuronGroup(N=model.N_e, [brian2.core.base.unused_brian_object] WARNING The object 'neurongroup' is getting deleted, but was never included in a network. This probably means that you did not store the object reference in a variable, or that the variable was not used to construct the network. The object was created here (most recent call only): File '/builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/examples/example_24_large_scale_brian2_simulation/clusternet.py', line 211, in _build_model neurons_i = NeuronGroup(N=model.N_i, [brian2.core.base.unused_brian_object] MainProcess pypet.environment.Environment INFO Found storage service attached to Trajectory. Will use this storage service. MainProcess pypet.environment.Environment INFO Environment initialized. MainProcess pypet.storageservice.HDF5StorageService INFO Loading trajectory `Clustered_Network`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `config` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `derived_parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `parameters` in mode `2`. MainProcess pypet.storageservice.HDF5StorageService INFO Loading branch `results` in mode `1`. IMPORTED MATPLOTLIB WITH AGG *** Running under Linux *** ----- I will skip the following tests: `{'21'}` ---- ########## Running __init__.py ########### #### Example successful #### ########## Running example_01_first_steps.py ########### #### Example successful #### ########## Running example_02_trajectory_access_and_storage.py ########### #### Example successful #### ########## Running example_03_trajectory_merging.py ########### #### Example successful #### ########## Running example_04_multiprocessing.py ########### #### Example successful #### ########## Running example_05_custom_parameter.py ########### #### Example successful #### ########## Running example_06_parameter_presetting.py ########### #### Example successful #### ########## Running example_08_f_find_idx.py ########### #### Example successful #### ########## Running example_09_large_results.py ########### #### Example successful #### ########## Running example_10_get_items_from_all_runs.py ########### #### Example successful #### ########## Running example_12_sharing_data_between_processes.py ########### #### Example successful #### ########## Running example_14_links.py ########### #### Example successful #### ########## Running example_15_more_ways_to_add_data.py ########### #### Example successful #### ########## Running example_16_multiproc_context.py ########### #### Example successful #### ########## Running example_18_many_runs.py ########### #### Example successful #### ########## Running example_19_using_deap.py ########### #### Example successful #### ########## Running example_19b_using_deap_less_overhead.py ########### #### Example successful #### ########## Running example_19c_using_deap_with_post_processing.py ########### #### Example successful #### ########## Running example_20_using_deap_manual_runs.py ########### #### Example successful #### ---------- Skipping example_21_scoop_multiprocessing.py ---------- ########## Running example_23_brian2_network.py ########### #### Example successful #### Running original #### Example successful #### Running pypet wrapping #### Example successful #### ########## Running example_13_post_processing ########### Running main #### Example successful #### Running analysis #### Example successful #### Running pipeline #### Example successful #### ########## Running example_24_large_scale_brian2_simulation ########### Running script #### Example successful #### Running analysis #### Example successful #### ~/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1 + popd + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-pypet-0.6.1-8.fc41.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.BIf952 + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd pypet-0.6.1 + DOCDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python3-pypet + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python3-pypet + cp -pr /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/README.md /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python3-pypet + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-pypet = 0.6.1-8.fc41 python3-pypet = 0.6.1-8.fc41 python3.13-pypet = 0.6.1-8.fc41 python3.13dist(pypet) = 0.6.1 python3dist(pypet) = 0.6.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.13 python3.13dist(numpy) python3.13dist(pandas) python3.13dist(scipy) python3.13dist(tables) Processing files: python-pypet-doc-0.6.1-8.fc41.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.xf9ujK + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd pypet-0.6.1 + DOCDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python-pypet-doc + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python-pypet-doc + cp -pr /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/CHANGES.txt /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python-pypet-doc + cp -pr /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/_clean/examples /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python-pypet-doc + cp -pr /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/doc/build/latex/pypet.pdf /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/doc/python-pypet-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.80X3Qm + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + cd pypet-0.6.1 + LICENSEDIR=/builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/licenses/python-pypet-doc + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/licenses/python-pypet-doc + cp -pr /builddir/build/BUILD/python-pypet-0.6.1-build/pypet-0.6.1/LICENSE /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT/usr/share/licenses/python-pypet-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-pypet-doc = 0.6.1-8.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/python-pypet-0.6.1-build/BUILDROOT Wrote: /builddir/build/SRPMS/python-pypet-0.6.1-8.fc41.src.rpm Wrote: /builddir/build/RPMS/python-pypet-doc-0.6.1-8.fc41.noarch.rpm Wrote: /builddir/build/RPMS/python3-pypet-0.6.1-8.fc41.noarch.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.4YsHrZ + umask 022 + cd /builddir/build/BUILD/python-pypet-0.6.1-build + test -d /builddir/build/BUILD/python-pypet-0.6.1-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-pypet-0.6.1-build + rm -rf /builddir/build/BUILD/python-pypet-0.6.1-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild python-pypet-0.6.1-8.fc41.src.rpm Finish: build phase for python-pypet-0.6.1-8.fc41.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-x86_64-1732721912.805485/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/python-pypet-0.6.1-8.fc41.src.rpm) Config(child) 12 minutes 16 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "python3-pypet", "epoch": null, "version": "0.6.1", "release": "8.fc41", "arch": "noarch" }, { "name": "python-pypet-doc", "epoch": null, "version": "0.6.1", "release": "8.fc41", "arch": "noarch" }, { "name": "python-pypet", "epoch": null, "version": "0.6.1", "release": "8.fc41", "arch": "src" } ] } RPMResults finished